# terms

id: PBO:0060126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 27","termid":"PBO:0060126"}


id: PBO:0053891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1173","termid":"PBO:0053891"}


id: MONDO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ectasia","secondary_identifiers":["icd11.foundation:1703179358","ICD9:371.71","MEDGEN:509803","SCTID:14748007","DOID:1436","UMLS:C0155135"],"termid":"MONDO:0001950","xrefs":{"Monarch":{"xref_id":"0001950"}}}


id: MONDO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic immune system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic immune disease (obsolete MONDO:0015984)","secondary_identifiers":["Orphanet:183770"],"synonyms":[{"name":"rare genetic immune system disease","type":"exact"}],"termid":"MONDO:0015984","xrefs":{"Monarch":{"xref_id":"0015984"}}}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: MONDO:0013833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 7","secondary_identifiers":["OMIM:614629","UMLS:C3553308","MEDGEN:766222"],"synonyms":[{"name":"KTCN7","type":"exact"},{"name":"keratoconus 7","type":"exact"}],"termid":"MONDO:0013833","xrefs":{"Monarch":{"xref_id":"0013833"}}}


id: PR:Q9P3W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dli1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain dil1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.04c","synonyms":[{"name":"Spom972h-dli1","type":"exact"}],"termid":"PR:Q9P3W4"}


id: PBO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin","termid":"PBO:0044214"}


id: PBO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl hydrolase","termid":"PBO:0048572"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: GO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-diaminopropane + S-adenosylmethioninamine = S-methyl-5'-thioadenosine + bis(3-aminopropyl)amine + H+.","definition_xrefs":["EC:2.5.1.23","RHEA:23244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"sym-norspermidine synthase activity","secondary_identifiers":["MetaCyc:SYM-NORSPERMIDINE-SYNTHASE-RXN","KEGG_REACTION:R03271"],"synonyms":[{"name":"S-adenosylmethioninamine:propane-1,3-diamine 3-aminopropyltransferase activity","type":"related"}],"termid":"GO:0050314"}


id: GO:0031463
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74728],"is_not":false,"summary":null,"term":"GO:0031463"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul3-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"BC3B complex","type":"exact"},{"name":"BCR3 complex","type":"exact"},{"name":"CDL3 complex","type":"exact"},{"name":"CRL3 complex","type":"exact"},{"name":"SCF3 complex","type":"related"},{"name":"cullin-RING ligase 3","type":"exact"}],"termid":"GO:0031463","terms_by_termid":{"GO:0031463":null}}


id: PATO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive","synonyms":[{"name":"resinous","type":"related"}],"termid":"PATO:0002331"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: GO:0018342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:di","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"prenylation","termid":"GO:0097354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein prenylation","secondary_identifiers":["GO:0018346"],"synonyms":[{"name":"C-terminal protein prenylation","type":"narrow"},{"name":"protein amino acid prenylation","type":"exact"}],"termid":"GO:0018342"}


id: GO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"negatively_regulates","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cartilage development","termid":"GO:0061037"}


id: MONDO:0700148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects dogs, arising from transitional epithelium.","definition_xrefs":["NCIT:C128126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine transitional cell carcinoma","termid":"MONDO:0700148","xrefs":{"Monarch":{"xref_id":"0700148"}}}


id: MONDO:0005913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Influenza-like febrile viral disease caused by several members of the bunyaviridae family and transmitted mostly by the bloodsucking sandfly Phlebotomus papatasii.","definition_xrefs":["MESH:D010217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phlebotomus fever","secondary_identifiers":["EFO:0007437","ICD10CM:A93.1","MEDGEN:14597","SCTID:407476002","UMLS:C0030372","ICD9:066.0","DOID:11360"],"synonyms":[{"name":"Sandfly fever","type":"exact"},{"name":"Sandfly-borne Bunyavirus fever","type":"exact"},{"name":"Sandfly-borne arboviral fever","type":"exact"},{"name":"Sandfly-borne phleboviral disease","type":"exact"},{"name":"pappataci fever","type":"exact"}],"termid":"MONDO:0005913","xrefs":{"Monarch":{"xref_id":"0005913"}}}


id: GO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2 phase","termid":"GO:0051319"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0008150","GO:0051329"],"is_obsolete":false,"name":"mitotic G2 phase","synonyms":[{"name":"G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000085"}


id: GO:0021511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord patterning","termid":"GO:0021511"}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: PBO:0053005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 1","termid":"PBO:0053005"}


id: MONDO:0004569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuropathy from injury","secondary_identifiers":["DOID:8443","MEDGEN:507501","ICD9:353.0","UMLS:C0006091"],"synonyms":[{"name":"brachial plexus lesion","type":"exact"},{"name":"brachial plexus lesions","type":"exact"}],"termid":"MONDO:0004569","xrefs":{"Monarch":{"xref_id":"0004569"}}}


id: PBO:0064803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A","termid":"PBO:0064803"}


id: PBO:0070909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 17","termid":"PBO:0070909"}


id: GO:0140314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcium ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"calcium ion sequestering activity","termid":"GO:0140314"}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: PBO:0055673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C, hepatic type","termid":"PBO:0055673"}


id: MONDO:0859372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 29, with polyglucosan bodies","secondary_identifiers":["OMIM:620236","MEDGEN:1824081","UMLS:C5774308"],"termid":"MONDO:0859372","xrefs":{"Monarch":{"xref_id":"0859372"}}}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: MONDO:0013741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in heterozygous mutation in the CPA6 gene on chromosome 8q13.","definition_xrefs":["PMID:21922598","DOID:0060752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 5","secondary_identifiers":["MEDGEN:482360","OMIM:614417","UMLS:C3280730","GARD:18280"],"synonyms":[{"name":"ETL5","type":"exact"},{"name":"epilepsy, familial temporal lobe, 5","type":"related"},{"name":"epilepsy, familial temporal lobe, type 5","type":"exact"},{"name":"familial temporal lobe epilepsy type 5","type":"exact"}],"termid":"MONDO:0013741","xrefs":{"Monarch":{"xref_id":"0013741"}}}


id: PBO:0055418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2848","termid":"PBO:0055418"}


id: PBO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 20","termid":"PBO:0060073"}


id: PBO:0056207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B2","termid":"PBO:0056207"}


id: GO:0098926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynaptic signal transduction","synonyms":[{"name":"postsynaptic signaling pathway","type":"exact"}],"termid":"GO:0098926"}


id: FYPO:0003019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein autophosphorylation during vegetative growth","synonyms":[{"name":"abnormal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003019"}


id: GO:2000274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell migration, open tracheal system.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"regulates","term_name":"epithelial cell migration, open tracheal system","termid":"GO:0007427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell migration, open tracheal system","synonyms":[{"name":"regulation of tracheal cell migration","type":"related"},{"name":"regulation of tracheal epithelial cell migration","type":"related"}],"termid":"GO:2000274"}


id: GO:2001174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001174)","synonyms":[{"name":"negative regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"negative regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"negative regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001174"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: MONDO:0018517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete carcinoma of the anal canal (obsolete MONDO:0018517)","termid":"MONDO:0018517","xrefs":{"Monarch":{"xref_id":"0018517"}}}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: PR:O74910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.12c","synonyms":[{"name":"De-localization of swi6 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf1","type":"exact"},{"name":"cryptic loci regulator 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74910"}


id: MONDO:0024711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed epithelial stromal tumor of the kidney with malignant stromal features.","definition_xrefs":["NCIT:C37265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"mixed epithelial stromal tumor of the kidney","termid":"MONDO:0002386"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"malignant mixed epithelial stromal tumor of the kidney","secondary_identifiers":["UMLS:C1334602","MEDGEN:233156"],"synonyms":[{"name":"malignant MEST","type":"exact"},{"name":"malignant mixed epithelial stromal tumor of the kidney","type":"exact"},{"name":"mixed epithelial stromal tumor of the kidney, malignant","type":"exact"},{"name":"mixed epithelial stromal tumour of the kidney, malignant","type":"exact"}],"termid":"MONDO:0024711","xrefs":{"Monarch":{"xref_id":"0024711"}}}


id: FYPO:0008031
data:
  {"alleles_by_uniquename":{"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119623,119624],"is_not":false,"summary":null,"term":"FYPO:0008031"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cellular response to blue light stimulus is abnormal.","definition_xrefs":["PMID:23873862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":2,"genotypes_by_uniquename":{"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal blue light response","references_by_uniquename":{"PMID:23873862":null},"single_locus_annotated_genes":["SJAG_02860","SJAG_05242"],"single_locus_genotype_uniquenames":["wcs2delta","wcs1delta"],"synonyms":[{"name":"abnormal reponse to blue light","type":"exact"},{"name":"defective blue light response","type":"exact"}],"termid":"FYPO:0008031","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0008031":null,"FYPO_EXT:0000001":null}}


id: PBO:0057256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 483","termid":"PBO:0057256"}


id: PBO:0057076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 155","termid":"PBO:0057076"}


id: PBO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 23","termid":"PBO:0046581"}


id: PBO:0040182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor for spindle microtubules","termid":"PBO:0040182"}


id: GO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear retinoid X receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear retinoic acid receptor binding","termid":"GO:0042974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear retinoid X receptor binding","synonyms":[{"name":"RXR binding","type":"exact"},{"name":"retinoid X receptor binding","type":"broad"}],"termid":"GO:0046965"}


id: MONDO:0006660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized vasculitis resulting from deposition of antibody-antigen complexes.","definition_xrefs":["NCIT:C34400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III hypersensitivity disease","termid":"MONDO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"arthus reaction","secondary_identifiers":["UMLS:C0003907","EFO:1000821","MEDGEN:2458","SCTID:402413008","DOID:1556","MedDRA:10003420","ICD9:708.8","ICD9:995.21","MESH:D001183"],"synonyms":[{"name":"arthus phenomenon","type":"exact"},{"name":"arthus reaction","type":"exact"},{"name":"arthus reaction (function)","type":"exact"},{"name":"arthus type urticaria","type":"exact"}],"termid":"MONDO:0006660","xrefs":{"Monarch":{"xref_id":"0006660"}}}


id: MONDO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug and/or toxic myopathy (obsolete MONDO:0016124)","secondary_identifiers":["Orphanet:206985"],"termid":"MONDO:0016124","xrefs":{"Monarch":{"xref_id":"0016124"}}}


id: PBO:0077176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin rod domain containing 1","termid":"PBO:0077176"}


id: FYPO:0000414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which plasma membrane fusion involved in cytogamy is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased cell fusion during mating (obsolete FYPO:0000414)","synonyms":[{"name":"cell fusion: decreased","type":"related"},{"name":"decreased cell fusion during conjugation","type":"exact"},{"name":"decreased plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"reduced cell fusion during mating","type":"exact"}],"termid":"FYPO:0000414"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99365],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["PMID:15189154","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: PATO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000064 absolute percentage (obsolete PATO:0000064)","termid":"PATO:0000064"}


id: MONDO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by anxious feelings or fear often accompanied by physical symptoms associated with anxiety.","definition_xrefs":["NCIT:C2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anxiety disorder","secondary_identifiers":["MEDGEN:361","DOID:2030","UMLS:C0003469","SCTID:197480006","MESH:D001008","EFO:0006788","ICD9:300.09"],"synonyms":[{"name":"anxiety","type":"broad"},{"name":"anxiety disorder","type":"exact"},{"name":"anxiety state","type":"exact"}],"termid":"MONDO:0005618","xrefs":{"Monarch":{"xref_id":"0005618"}}}


id: PBO:0045663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dymeclin","termid":"PBO:0045663"}


id: MONDO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Signs and symptoms related to acute ischemia of the myocardium secondary to coronary artery disease. The clinical presentation covers a spectrum of heart diseases from unstable angina to myocardial infarction.","definition_xrefs":["NCIT:C53652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"myocardial ischemia","termid":"MONDO:0024644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute coronary syndrome","secondary_identifiers":["EFO:0005672","MEDGEN:215295","MESH:D054058","SCTID:394659003","UMLS:C0948089"],"synonyms":[{"name":"acute coronary syndrome","type":"exact"},{"name":"acute coronary syndromes","type":"related"},{"name":"coronary syndrome, acute","type":"related"},{"name":"coronary syndromes, acute","type":"related"},{"name":"syndrome, acute coronary","type":"related"},{"name":"syndromes, acute coronary","type":"related"}],"termid":"MONDO:0005542","xrefs":{"Monarch":{"xref_id":"0005542"}}}


id: MONDO:0014954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, periodontitis type","termid":"MONDO:0007527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, periodontal type 2","secondary_identifiers":["GARD:16209","OMIM:617174","UMLS:C4310681","MEDGEN:934648","DOID:0080987"],"synonyms":[{"name":"EDSPD2","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontal type, 2","type":"related"}],"termid":"MONDO:0014954","xrefs":{"Monarch":{"xref_id":"0014954"}}}


id: MONDO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by bilateral shortening of the fifth fingers and fifth metacarpals. It has been described in several members of one family. Some members of the family also had spherocytosis and insulin resistance. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:66518"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short fifth metacarpals-insulin resistance syndrome","secondary_identifiers":["GARD:18868","MEDGEN:929290","UMLS:C4303621"],"termid":"MONDO:0019017","xrefs":{"Monarch":{"xref_id":"0019017"}}}


id: GO:0010459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate","termid":"GO:0010459"}


id: MONDO:0010144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibial hemimelia is a rare congenital anomaly characterized by deficiency of the tibia with a relatively intact fibula.","definition_xrefs":["Orphanet:93322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia","secondary_identifiers":["MEDGEN:120551","UMLS:C0265633","MESH:C535563","OMIM:275220","GARD:8707","icd11.foundation:1111258427","SCTID:79177001"],"synonyms":[{"name":"Thm","type":"related"},{"name":"absence of tibia","type":"related"},{"name":"bilateral absence of the tibia","type":"related"},{"name":"congenital absence of tibia","type":"exact"},{"name":"congenital aplasia and dysplasia of the tibia with intact fibula","type":"exact"},{"name":"congenital longitudinal deficiency of the tibia","type":"exact"},{"name":"tibia, absence of","type":"related"},{"name":"tibial hemimelia","type":"exact"},{"name":"tibial longitudinal meromelia","type":"exact"}],"termid":"MONDO:0010144","xrefs":{"Monarch":{"xref_id":"0010144"}}}


id: RO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance removed\\\" is a relation existing between two physical entities in which the first entity has had the second entity (a substance) removed from it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_removed","termid":"RO:0009002"}


id: MONDO:1012294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polymicrogyria and asymmetrical ventricular dilation, non-human animal","termid":"MONDO:1011864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria and asymmetrical ventricular dilation, dog","secondary_identifiers":["OMIA:001098-9615"],"termid":"MONDO:1012294","xrefs":{"Monarch":{"xref_id":"1012294"}}}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: GO:0102100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + mycothiol = mycothiol-arsenate conjugate + H2O.","definition_xrefs":["GOC:pz","EC:2.8.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mycothiol-arsenate ligase activity","secondary_identifiers":["RHEA:27349","MetaCyc:RXN-11187"],"termid":"GO:0102100"}


id: PBO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 93","termid":"PBO:0071091"}


id: GO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA metabolic process","synonyms":[{"name":"21U-RNA metabolism","type":"exact"}],"termid":"GO:0034585"}


id: PATO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000371 distance value (obsolete PATO:0000371)","termid":"PATO:0000371"}


id: PBO:0039676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit mu 1","termid":"PBO:0039676"}


id: GO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannitol(out) = protein histidine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannitol transmembrane transporter activity","termid":"GO:0015575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0016740","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"mannitol PTS transporter activity","type":"exact"}],"termid":"GO:0022872"}


id: PBO:0054937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2351","termid":"PBO:0054937"}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: GO:0034904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-2-oxopent-4-enoate + H2O = 5-chloro-4-hydroxy-2-oxopentanate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-2-oxopent-4-enoate hydratase activity (obsolete GO:0034904)","termid":"GO:0034904"}


id: MONDO:0800209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3b","secondary_identifiers":["UMLS:C2751105","MEDGEN:416468"],"synonyms":[{"name":"CFEOM3B","type":"exact"}],"termid":"MONDO:0800209","xrefs":{"Monarch":{"xref_id":"0800209"}}}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: PR:O14010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb6 gene.","definition_xrefs":["UniProtKB:O14010","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.07","synonyms":[{"name":"Spom972h-srb6","type":"exact"},{"name":"mediator complex subunit 22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14010"}


id: PBO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this may be a none coding RNA","termid":"PBO:0005863"}


id: PBO:0044060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin E/M","termid":"PBO:0044060"}


id: PBO:0028099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_binding_specificity","termid":"PBO:0028099"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["EC:3.5.1.32","RHEA:10424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01424","MetaCyc:HIPPURATE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: GO:0102620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-geranylgeranylindole + O2 + NADPH + H+ = 10,11-epoxy-3-geranylgeranylindole + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-geranylgeranylindole NADPH:oxygen oxidoreductase (10,11-epoxidizing) activity (obsolete GO:0102620)","termid":"GO:0102620"}


id: GO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic PP cell over time, from its formation to the mature structure. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"pancreatic PP cell differentiation","termid":"GO:0003312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell development","termid":"GO:0003325"}


id: MONDO:0005632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vaso-occlusive crisis of the pulmonary vasculature occurring in patients with sickle cell disease. It is characterized by the presence of a new radiodensity on a chest radiograph accompanied by fever, cough, sputum production, dyspnea, or hypoxia.","definition_xrefs":["NCIT:C138179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute chest syndrome","secondary_identifiers":["ICD9:517.3","MESH:D056586","DOID:1584","EFO:0007129","MEDGEN:196643","SCTID:372146004","UMLS:C0742343"],"synonyms":[{"name":"ACS","type":"exact"},{"name":"acute chest syndrome in sickle cell disease","type":"exact"}],"termid":"MONDO:0005632","xrefs":{"Monarch":{"xref_id":"0005632"}}}


id: PBO:0044456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 35, pseudogene","termid":"PBO:0044456"}


id: PBO:0044116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 2","termid":"PBO:0044116"}


id: PBO:0063169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX interacting protein 1","termid":"PBO:0063169"}


id: PBO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 1","termid":"PBO:0048454"}


id: GO:1900116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of signal transduction that takes place in extracellular region.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"extracellular regulation of signal transduction","termid":"GO:1900115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular negative regulation of signal transduction","synonyms":[{"name":"down regulation of signal transduction in extracellular region","type":"exact"},{"name":"down-regulation of signal transduction in extracellular region","type":"exact"},{"name":"downregulation of signal transduction in extracellular region","type":"exact"},{"name":"extracellular inhibition of signaling pathway","type":"narrow"},{"name":"inhibition of signal transduction in extracellular region","type":"narrow"},{"name":"negative regulation of signaling pathway in extracellular region","type":"exact"},{"name":"negative regulation of signalling pathway in extracellular region","type":"exact"}],"termid":"GO:1900116"}


id: GO:0072524
data:
  {"annotated_genes":["SJAG_05314","SJAG_03852","SJAG_03096","SJAG_05230","SJAG_01566","SJAG_03298","SJAG_03903","SJAG_04048","SJAG_00691","SJAG_03946","SJAG_06621","SJAG_02889","SJAG_00252","SJAG_02369","SJAG_03934","SJAG_02696","SJAG_02148","SJAG_04362","SJAG_04263","SJAG_01824","SJAG_03373","SJAG_00522","SJAG_02796","SJAG_01582","SJAG_03669","SJAG_06622","SJAG_00707","SJAG_04693","SJAG_01500","SJAG_03828","SJAG_00685","SJAG_00501","SJAG_00070","SJAG_02297","SJAG_00957","SJAG_04467","SJAG_02785","SJAG_00633","SJAG_00283","SJAG_00461","SJAG_02009","SJAG_03091","SJAG_02135","SJAG_00839","SJAG_02462","SJAG_03660","SJAG_01543","SJAG_01539","SJAG_01881","SJAG_02191","SJAG_01310","SJAG_04334","SJAG_01383","SJAG_02154","SJAG_02945","SJAG_01425","SJAG_00027","SJAG_02618","SJAG_01012","SJAG_02107","SJAG_00605","SJAG_02853","SJAG_04152","SJAG_00409","SJAG_01359","SJAG_04192","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[116376,105470,97986,94495,109406,103387,109405,109410,105840,105471,77806,109407,109408,109409,105841,98261,105472,94985,109411,103641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[111592,98179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[96540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[90614,113108,70571,91037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[77426,74547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[72269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[68930,58473,66602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[72271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[69948,74662,74416,79799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[95080,95081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"},{"annotations":[79822,77885,70959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[72272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[73746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006739"},{"annotations":[72967,75963],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[100616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[66151,89262,103438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[69760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109630,88974,90615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[69761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[73001,73687,74409,108445],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[94500,72021,74444,80321,79045,98180,72972],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[89647],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[78105,75117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[64039,75434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[87677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[64036,75437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[78301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[69941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[75962],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[100873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[72298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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id: MONDO:0022740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christian Johnson angenieta syndrome","termid":"MONDO:0022740","xrefs":{"Monarch":{"xref_id":"0022740"}}}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: MONDO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"elliptocytosis 3","secondary_identifiers":["GARD:16273","MESH:C566678","OMIM:617948","UMLS:C1866810","MEDGEN:357139"],"synonyms":[{"name":"EL3","type":"related"},{"name":"anemia, neonatal hemolytic, fatal or near-fatal","type":"exact"},{"name":"anemia, perinatal hemolytic, fatal or near-fatal","type":"related"},{"name":"elliptocytosis 3","type":"exact"},{"name":"elliptocytosis-3","type":"exact"}],"termid":"MONDO:0054780","xrefs":{"Monarch":{"xref_id":"0054780"}}}


id: PBO:0039858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23","termid":"PBO:0039858"}


id: PBO:0058913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12131","termid":"PBO:0058913"}


id: PBO:0042369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule pseudogene 1","termid":"PBO:0042369"}


id: FYPO:0003704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000641","FYPO:0000661","FYPO:0000707","FYPO:0000002","FYPO:0001985","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone deacetylase activity","synonyms":[{"name":"reduced histone deacetylase activity","type":"exact"}],"termid":"FYPO:0003704"}


id: GO:0035234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo.","definition_xrefs":["PMID:12814944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectopic germ cell programmed cell death","synonyms":[{"name":"programmed cell death of ectopic germ cells","type":"exact"},{"name":"programmed cell death, ectopic germ cells","type":"exact"}],"termid":"GO:0035234"}


id: GO:1990812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin, stiff protrusion extended by the leading edge of an axonal or dendritic growth cone.","definition_xrefs":["PMID:25598228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone filopodium","termid":"GO:1990812"}


id: MONDO:0012934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 3","secondary_identifiers":["OMIM:612557","UMLS:C2675516","MEDGEN:382621"],"synonyms":[{"name":"Clls3","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 3","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0012934","xrefs":{"Monarch":{"xref_id":"0012934"}}}


id: MONDO:0024282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive malignant neoplasm that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin and may resemble the epithelial cells of the endocervix or gastrointestinal tract. It includes mucinous adenocarcinoma and mucinous adenocarcinofibroma.","definition_xrefs":["NCIT:C40033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous ovarian cancer","secondary_identifiers":["ONCOTREE:MOV","UMLS:C1518233","MEDGEN:274767"],"synonyms":[{"name":"malignant ovarian mucinous neoplasm","type":"exact"},{"name":"malignant ovarian mucinous tumor","type":"exact"},{"name":"malignant ovarian mucinous tumour","type":"exact"},{"name":"ovarian mucinous neoplasm, malignant","type":"exact"}],"termid":"MONDO:0024282","xrefs":{"Monarch":{"xref_id":"0024282"}}}


id: PBO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-26","termid":"PBO:0075063"}


id: FYPO:0000918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal citrate (Si)-synthase activity","termid":"FYPO:0000917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased citrate (Si)-synthase activity","synonyms":[{"name":"decreased citrate synthase activity","type":"broad"},{"name":"reduced citrate (Si)-synthase activity","type":"exact"}],"termid":"FYPO:0000918"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: PBO:0063028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 1","termid":"PBO:0063028"}


id: FYPO:0002316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular squalene level","synonyms":[{"name":"normal cellular squalene accumulation","type":"related"},{"name":"normal cellular squalene level during mitotic cell cycle","type":"related"},{"name":"normal cellular squalene level during vegetative growth","type":"exact"}],"termid":"FYPO:0002316"}


id: PBO:0110370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOSC8 pseudogene 1","termid":"PBO:0110370"}


id: MONDO:1010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dandy-Walker syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dandy-Walker syndrome, non-human animal","termid":"MONDO:1010228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dandy-Walker syndrome, sheep","secondary_identifiers":["OMIA:000258-9940"],"termid":"MONDO:1010967","xrefs":{"Monarch":{"xref_id":"1010967"}}}


id: PBO:0078776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-8","termid":"PBO:0078776"}


id: FYPO:0001152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during nitrogen starvation","type":"related"},{"name":"decreased RNA level during nitrogen depletion","type":"exact"},{"name":"decreased RNA level during nitrogen deprivation","type":"exact"},{"name":"decreased transcript level during nitrogen starvation","type":"exact"},{"name":"reduced RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001152"}


id: MONDO:0013995
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86998],"is_not":false,"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis of pregnancy","termid":"MONDO:0100429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, intrahepatic, of pregnancy, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554241","GARD:15888","DOID:0070229","OMIM:614972","MEDGEN:767155"],"synonyms":[{"name":"ICP3","type":"related"},{"name":"cholestasis, intrahepatic, of pregnancy 3","type":"exact"},{"name":"cholestasis, intrahepatic, of pregnancy type 3","type":"exact"}],"termid":"MONDO:0013995","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0013995"}}}


id: PBO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0017928"}


id: PBO:0056605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDN1 antisense RNA 1","termid":"PBO:0056605"}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: PBO:0072886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase 1","termid":"PBO:0072886"}


id: PBO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase (predicted)","termid":"PBO:0003010"}


id: PBO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 32","termid":"PBO:0071373"}


id: PBO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Y-linked 14 pseudogene","termid":"PBO:0042639"}


id: MONDO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory and suppurating type of tinea capitis, a skin infection caused by Trichophyton or Microsporum fungi, that predominantly affects the scalp and that is characterized by the development of painful crusty lesions covered with follicular pustules and surrounded by erythematous alopecic areas, that can later evolve into abscesses and leave permanent cicatricial alopecia. Lesions can be associated with regional lymphadenopathy.","definition_xrefs":["Orphanet:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kerion celsi","secondary_identifiers":["SCTID:19087001","MEDGEN:124446","UMLS:C0276742","GARD:3109","icd11.foundation:1449494917","OMIM:275240"],"synonyms":[{"name":"TINEA imbricata, susceptibility to","type":"related"},{"name":"Tinea capitis profunda","type":"related"},{"name":"Trichophyton infection","type":"related"},{"name":"susceptibility to Tinea imbricata","type":"related"},{"name":"trichophytia profunda barbae","type":"related"},{"name":"trichophytia profunda capitis","type":"related"}],"termid":"MONDO:0010146","xrefs":{"Monarch":{"xref_id":"0010146"}}}


id: PBO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolizing) (predicted)","termid":"PBO:0000151"}


id: PBO:0072239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 14","termid":"PBO:0072239"}


id: GO:2000333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"negatively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood microparticle formation","synonyms":[{"name":"negative regulation of microparticle generation","type":"exact"},{"name":"negative regulation of microparticle release","type":"exact"}],"termid":"GO:2000333"}


id: MONDO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-advanced bone age-early-onset osteoarthritis syndrome","secondary_identifiers":["Orphanet:435804","GARD:17717","UMLS:C5681177","MEDGEN:1811782"],"termid":"MONDO:0018566","xrefs":{"Monarch":{"xref_id":"0018566"}}}


id: GO:0102249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + a 1,2-diacyl-sn-glycerol = a 1,2-diacyl-sn-glycerol + a phosphatidylcholine.","definition_xrefs":["MetaCyc:RXN-12386","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine:diacylglycerol cholinephosphotransferase activity","termid":"GO:0102249"}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: PBO:0081063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCRB1 pseudogene 1","termid":"PBO:0081063"}


id: MONDO:0700153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the lung in dogs and is characterized by the presence of malignant glandular epithelial cells.","definition_xrefs":["NCIT:C129299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lung adenocarcinoma","termid":"MONDO:0700153","xrefs":{"Monarch":{"xref_id":"0700153"}}}


id: PBO:0064596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 2","termid":"PBO:0064596"}


id: PBO:0065310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 30, pseudogene","termid":"PBO:0065310"}


id: GO:0038144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB4. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB4.","definition_xrefs":["PMID:16460914","GOC:signaling","PMID:16978839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ERBB4:ERBB2 complex","synonyms":[{"name":"ERBB4:ERBB2 heterodimer","type":"narrow"},{"name":"NRGs/EGFLs:ERBB4:ERBB2","type":"narrow"}],"termid":"GO:0038144"}


id: GO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet formation","termid":"GO:0090014"}


id: MONDO:0100356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic presentation","termid":"MONDO:0100356","xrefs":{"Monarch":{"xref_id":"0100356"}}}


id: PBO:0091382
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.2343703_2343704insA","termid":"PBO:0091382"}


id: GO:0046160
data:
  {"annotated_genes":["SJAG_03173","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78209,79896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03173":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme a metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"haem a metabolic process","type":"exact"},{"name":"haem a metabolism","type":"exact"},{"name":"heme a metabolism","type":"exact"}],"termid":"GO:0046160","terms_by_termid":{"GO:0006784":null}}


id: PBO:0068673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 54, pseudogene","termid":"PBO:0068673"}


id: PR:G2TRJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1834.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein c1834.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.13","synonyms":[{"name":"Spom972h-SPAC1834.13","type":"exact"}],"termid":"PR:G2TRJ7"}


id: GO:0031808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H2 histamine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled histamine receptor binding","termid":"GO:0031806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"H2 histamine receptor binding","synonyms":[{"name":"H2 histamine receptor ligand","type":"narrow"}],"termid":"GO:0031808"}


id: GO:1904810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule transport.","definition_xrefs":["PMID:22699897","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"negatively_regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dense core granule transport","synonyms":[{"name":"down regulation of dense core granule transport","type":"exact"},{"name":"down regulation of dense core vesicle transport","type":"exact"},{"name":"down-regulation of dense core granule transport","type":"exact"},{"name":"down-regulation of dense core vesicle transport","type":"exact"},{"name":"downregulation of dense core granule transport","type":"exact"},{"name":"downregulation of dense core vesicle transport","type":"exact"},{"name":"inhibition of dense core granule transport","type":"narrow"},{"name":"inhibition of dense core vesicle transport","type":"narrow"},{"name":"negative regulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904810"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: PR:O59781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial Rho GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rho GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.04c","secondary_identifiers":["UniProtKB:O59781"],"synonyms":[{"name":"GTPase EF-hand protein of mitochondria 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC320.04c","type":"related"},{"name":"Spom972h-RHOT1","type":"exact"}],"termid":"PR:O59781"}


id: PBO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR4A1 antisense RNA","termid":"PBO:0061450"}


id: PBO:0058194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4487","termid":"PBO:0058194"}


id: PBO:0057213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378c","termid":"PBO:0057213"}


id: MONDO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the prostate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate calculus","secondary_identifiers":["UMLS:C0149525","ICD9:602.0","MEDGEN:57431","SCTID:85324003","DOID:13689","ICD10CM:N42.0"],"synonyms":[{"name":"Stone of prostate","type":"exact"},{"name":"calculus of prostate","type":"exact"},{"name":"lower urinary tract calculus of prostate gland","type":"exact"},{"name":"prostate gland lower urinary tract calculus","type":"exact"},{"name":"prostatic lithiasis","type":"exact"},{"name":"prostatic stone","type":"exact"}],"termid":"MONDO:0001776","xrefs":{"Monarch":{"xref_id":"0001776"}}}


id: PBO:0074991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-2","termid":"PBO:0074991"}


id: PBO:0058720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6848","termid":"PBO:0058720"}


id: PR:Q9Y7K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC216.03 gene.","definition_xrefs":["UniProtKB:Q9Y7K0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0659 protein C216.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.03","synonyms":[{"name":"Spom972h-SPBC216.03","type":"exact"}],"termid":"PR:Q9Y7K0"}


id: PBO:0083014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box RNA helicase; involved in the second catalytic step of splicing and in exon ligation; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step; missense mutation in human ortholog DHX38 associated with early-onset retinitis pigmentosa","termid":"PBO:0083014"}


id: PBO:0068122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 429","termid":"PBO:0068122"}


id: GO:0008953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: penicillin + H2O = a carboxylate + 6-aminopenicillanate.","definition_xrefs":["EC:3.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"penicillin amidase activity","secondary_identifiers":["RHEA:18693","MetaCyc:PENICILLIN-AMIDASE-RXN"],"synonyms":[{"name":"alpha-acylamino-beta-lactam acylhydrolase activity","type":"related"},{"name":"ampicillin acylase activity","type":"related"},{"name":"benzylpenicillin acylase activity","type":"related"},{"name":"novozym 217","type":"related"},{"name":"palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity","type":"exact"},{"name":"penicillin acylase activity","type":"related"},{"name":"penicillin amidohydrolase activity","type":"related"},{"name":"semacylase activity","type":"related"}],"termid":"GO:0008953"}


id: PBO:0005838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase (predicted)","termid":"PBO:0005838"}


id: MONDO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chylocele of tunica vaginalis","secondary_identifiers":["ICD9:608.84","DOID:10835","SCTID:7864001","UMLS:C0156315","MEDGEN:510239"],"termid":"MONDO:0001136","xrefs":{"Monarch":{"xref_id":"0001136"}}}


id: GO:0030968
data:
  {"annotated_genes":["SJAG_04103","SJAG_00226","SJAG_03841","SJAG_04262","SJAG_00681","SJAG_03611","SJAG_02601","SJAG_04435","SJAG_01768","SJAG_01516","SJAG_04283","SJAG_04471","SJAG_00530","SJAG_04118","SJAG_03482","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67971,70528,71104,76199,77157,98713,101240,107190,113824,114095,114228,116055,116803,117253],"is_not":false,"summary":null,"term":"GO:0030968"},{"annotations":[77833,93066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation.","definition_xrefs":["GOC:mah","PMID:12042763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"part_of","term_name":"cellular response to unfolded protein","termid":"GO:0034620"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00530":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endoplasmic reticulum unfolded protein response","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-381119"],"synonyms":[{"name":"ER unfolded protein response","type":"exact"},{"name":"SREBP-mediated signalling pathway","type":"related"},{"name":"erUPR","type":"exact"}],"termid":"GO:0030968","terms_by_termid":{"GO:0030968":null,"GO:0036498":null}}


id: MONDO:0003760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"ovarian germ cell tumor","termid":"MONDO:0011366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pediatric ovarian germ cell tumor","secondary_identifiers":["MEDGEN:162990","DOID:6084","NCIT:C8588","UMLS:C0796664"],"synonyms":[{"name":"childhood ovarian germ cell neoplasm","type":"exact"},{"name":"childhood ovarian germ cell tumor","type":"exact"},{"name":"childhood ovarian germ cell tumour","type":"exact"},{"name":"ovarian germ cell tumor","type":"broad"},{"name":"ovarian germ cell tumor of childhood","type":"exact"},{"name":"ovarian germ cell tumour","type":"broad"},{"name":"ovarian germ cell tumour of childhood","type":"exact"},{"name":"paediatric ovarian germ cell neoplasm","type":"exact"},{"name":"pediatric ovarian germ cell neoplasm","type":"exact"},{"name":"pediatric ovarian germ cell tumor","type":"exact"}],"termid":"MONDO:0003760","xrefs":{"Monarch":{"xref_id":"0003760"}}}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0029763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vacuolated_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029763"}


id: PBO:0078139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 18","termid":"PBO:0078139"}


id: PBO:0114458
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Like Kinase","termid":"PBO:0114458"}


id: MONDO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 12q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 12. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 12q duplication include developmental delay, intellectual disability, behavioral problems, growth delay, and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 12","termid":"MONDO:0042968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 12","secondary_identifiers":["UMLS:C0795846","MESH:C538300","GARD:1926","MEDGEN:208641"],"synonyms":[{"name":"12q duplication","type":"related"},{"name":"12q trisomy","type":"related"},{"name":"Duplication 12q","type":"related"},{"name":"chromosome 12q duplication","type":"related"},{"name":"partial trisomy 12q","type":"related"},{"name":"trisomy 12q","type":"related"}],"termid":"MONDO:0042969","xrefs":{"Monarch":{"xref_id":"0042969"}}}


id: PATO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000175 behavioral function (obsolete PATO:0000175)","termid":"PATO:0000175"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: PBO:0110971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog, probable oxidase, implicated in lipid metabolism, vitamin metabolism or lipoylation","termid":"PBO:0110971"}


id: FYPO:0003826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, has two nuclei but no septum, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","termid":"FYPO:0003825"},{"relation_name":"is_a","term_name":"inviable elongated binucleate aseptate cell","termid":"FYPO:0004684"},{"relation_name":"is_a","term_name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","synonyms":[{"name":"inviable cell with nuclear division arrest at G2/M without septation (elongated cell)","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic G2/M phase transition arrest before cell separation","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation during mitotic cell cycle","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cytokinesis","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition before cell separation during vegetative growth","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest at G2/M before division septum assembly","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest before septation","type":"exact"},{"name":"lethal; elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"exact"},{"name":"mitotic G2/M arrest after failed cytokinesis, with inviable elongated cell","type":"related"},{"name":"mitotic cell cycle arrest at G2/M before cell separation with inviable elongated binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0003826"}


id: PBO:0029590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_binding_phenotype","termid":"PBO:0029590"}


id: GO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051531","GO:0051532"],"synonyms":[{"name":"NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"regulation of calcineurin-NFAT signalling cascade","type":"exact"}],"termid":"GO:0070884"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: GO:0043455
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolism","type":"exact"}],"termid":"GO:0043455","terms_by_termid":{"GO:1905569":null}}


id: PBO:0034045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induces","termid":"PBO:0034045"}


id: GO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose biosynthetic process","termid":"GO:0030244"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"cell wall cellulose biosynthesis","type":"exact"},{"name":"cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:0052324"}


id: PBO:0059490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSS51 mitochondrial translational activator","termid":"PBO:0059490"}


id: MONDO:0100238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Fanconi renotubular syndrome that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited Fanconi renotubular syndrome","secondary_identifiers":["OMIMPS:134600"],"synonyms":[{"name":"hereditary Fanconi renotubular syndrome","type":"exact"}],"termid":"MONDO:0100238","xrefs":{"Monarch":{"xref_id":"0100238"}}}


id: PBO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase","termid":"PBO:0047473"}


id: PBO:0068227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 534","termid":"PBO:0068227"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: GO:0035354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 1 (TLR1) and Toll-like receptor 2 (TLR2).","definition_xrefs":["GOC:add","PMID:21481769","GOC:signaling","PMID:17889651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Toll-like receptor 1-Toll-like receptor 2 protein complex","secondary_identifiers":["GO:0038125"],"synonyms":[{"name":"TLR1-TLR2 protein complex","type":"exact"},{"name":"TLR1:TLR2 complex","type":"exact"},{"name":"TLR2:TLR1 heterodimer","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035354"}


id: PBO:0074008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 9","termid":"PBO:0074008"}


id: PBO:0089638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Adg3","termid":"PBO:0089638"}


id: PBO:0080161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3A","termid":"PBO:0080161"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: MOD:01198
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-heptosyl-L-serine.","definition_xrefs":["Unimod:490#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-heptosyl-L-serine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01198"}


id: PBO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68","termid":"PBO:0090188"}


id: PBO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035950"}


id: PBO:0074075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A48 antisense RNA 1","termid":"PBO:0074075"}


id: PR:Q09768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00267","PANTHER:PTHR11164:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.10c","secondary_identifiers":["UniProtKB:Q09768"],"synonyms":[{"name":"GCS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLC","type":"exact"},{"name":"gamma-ECS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09768"}


id: PBO:0076387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator of cytochrome c oxidase I","termid":"PBO:0076387"}


id: GO:1903704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:nc","PMID:19701182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of siRNA processing","termid":"GO:0070921"},{"relation_name":"negatively_regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of siRNA processing","synonyms":[{"name":"down regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"down regulation of RNA interference, production of siRNA","type":"exact"},{"name":"down regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"down regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"down-regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"down-regulation of RNA interference, production of siRNA","type":"exact"},{"name":"down-regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"down-regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"downregulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"downregulation of RNA interference, production of siRNA","type":"exact"},{"name":"downregulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"downregulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"inhibition of RNA interference, production of guide RNAs","type":"narrow"},{"name":"inhibition of RNA interference, production of siRNA","type":"narrow"},{"name":"inhibition of production of guide RNAs involved in RNA interference","type":"narrow"},{"name":"inhibition of production of siRNA involved in RNA interference","type":"narrow"},{"name":"negative regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"negative regulation of RNA interference, production of siRNA","type":"exact"},{"name":"negative regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"negative regulation of production of siRNA involved in PTGS","type":"exact"},{"name":"negative regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"negative regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"negative regulation of siRNA production","type":"related"}],"termid":"GO:1903704"}


id: PBO:0039500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 23","termid":"PBO:0039500"}


id: RO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","termid":"RO:0002349"}


id: GO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular bridge","termid":"GO:0045171"}


id: GO:0006598
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyamine breakdown","type":"exact"},{"name":"polyamine catabolism","type":"exact"},{"name":"polyamine degradation","type":"exact"}],"termid":"GO:0006598","terms_by_termid":{"GO:0009447":null}}


id: GO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-beta-D-galactosaminyl-1,4-(N-acetyl-alpha-neuraminyl-2,3)-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.165-RXN","EC:2.4.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:13569"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminyl(alpha2->3)galactosyl(beta1->4)glucosyl beta1->4-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047233"}


id: GO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androsterone dehydrogenase [NAD(P)+] activity","termid":"GO:0047023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"androsterone dehydrogenase (B-specific) activity","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(B-specific)"],"synonyms":[{"name":"3-alpha-HSD activity","type":"related"},{"name":"3-alpha-hydroxysteroid dehydrogenase (B-specific) activity","type":"broad"},{"name":"3alpha-HSD","type":"related"},{"name":"3alpha-hydroxysteroid dehydrogenase (B-specific)","type":"broad"},{"name":"3alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (B-specific)","type":"broad"},{"name":"hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"sterognost 3alpha","type":"related"}],"termid":"GO:0047042"}


id: PBO:0083162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene PSK2/YOL045W","termid":"PBO:0083162"}


id: GO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracycline, (4S,4aS,5aS,6S,12aS)-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, a broad-spectrum antibiotic produced by streptomyces bacteria that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["Wikipedia:Tetracycline","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"tetracycline metabolic process","synonyms":[{"name":"tetracyclin metabolic process","type":"exact"},{"name":"tetracyclin metabolism","type":"exact"},{"name":"tetracycline metabolism","type":"exact"}],"termid":"GO:0043643"}


id: PBO:0062889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVOL1 antisense RNA 1","termid":"PBO:0062889"}


id: MOD:01138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aedans Cystenyl","termid":"MOD:01138"}


id: GO:0042546
data:
  {"annotated_genes":["SJAG_04184","SJAG_02727","SJAG_04878","SJAG_00610","SJAG_04238","SJAG_04668","SJAG_00218","SJAG_04851","SJAG_05001","SJAG_03013","SJAG_04483","SJAG_01426","SJAG_01288","SJAG_01028","SJAG_03483","SJAG_01453","SJAG_00661","SJAG_05285","SJAG_04236","SJAG_01171","SJAG_02278","SJAG_01321","SJAG_03705","SJAG_00310","SJAG_01835","SJAG_04666","SJAG_03057","SJAG_03646","SJAG_02684","SJAG_02222","SJAG_00974","SJAG_02916","SJAG_03587","SJAG_00876","SJAG_01963","SJAG_04771","SJAG_02192","SJAG_00424","SJAG_03123","SJAG_04551","SJAG_01290","SJAG_04868","SJAG_04073","SJAG_04850","SJAG_05272"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90207,88165,91737,88658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[104172,117819,117811,109086,114101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[73143,71372,78640,73281,70409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[70671,75707,91562,113183,106118,72907,115845,74398],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[78126,102646],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[95074,101947,101948,108080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[71323,102457,79422,74854,70428,70651,93306,70056,100623,117936,95223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009272"},{"annotations":[87472,92389],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[94910,89394,92395,102850],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[92679,100179,102154],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah","ISBN:0198506732","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00310":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00876":null,"SJAG_00974":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_02727":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04868":null,"SJAG_04878":null,"SJAG_05001":null,"SJAG_05272":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall assembly","type":"narrow"}],"termid":"GO:0042546","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: FYPO:0003250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins earlier than normal, e.g. before metaphase is complete.","definition_xrefs":["PMID:23394829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"premature septum assembly","synonyms":[{"name":"advanced septum assembly","type":"exact"},{"name":"ectopic metaphase septum assembly","type":"related"},{"name":"premature division septum assembly","type":"exact"},{"name":"premature division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"premature septation","type":"broad"},{"name":"premature septum assembly during mitotic cell cycle","type":"related"},{"name":"premature septum assembly during vegetative growth","type":"exact"},{"name":"premature septum formation","type":"related"}],"termid":"FYPO:0003250"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: GO:1902966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to early endosome.","definition_xrefs":["GOC:sjp","PMID:22621900","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to early endosome","termid":"GO:1902965"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to endosome","termid":"GO:1905668"},{"relation_name":"positively_regulates","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to early endosome","synonyms":[{"name":"activation of protein localisation in early endosome","type":"narrow"},{"name":"activation of protein localisation to early endosome","type":"narrow"},{"name":"activation of protein localization in early endosome","type":"narrow"},{"name":"activation of protein localization to early endosome","type":"narrow"},{"name":"positive regulation of protein localisation in early endosome","type":"exact"},{"name":"positive regulation of protein localisation to early endosome","type":"exact"},{"name":"positive regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localisation in early endosome","type":"exact"},{"name":"up regulation of protein localisation to early endosome","type":"exact"},{"name":"up regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localization to early endosome","type":"exact"},{"name":"up-regulation of protein localisation in early endosome","type":"exact"},{"name":"up-regulation of protein localisation to early endosome","type":"exact"},{"name":"up-regulation of protein localization in early endosome","type":"exact"},{"name":"up-regulation of protein localization to early endosome","type":"exact"},{"name":"upregulation of protein localisation in early endosome","type":"exact"},{"name":"upregulation of protein localisation to early endosome","type":"exact"},{"name":"upregulation of protein localization in early endosome","type":"exact"},{"name":"upregulation of protein localization to early endosome","type":"exact"}],"termid":"GO:1902966"}


id: GO:0042761
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356","SJAG_01458","SJAG_01300","SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72442,73560,77581,91914,103475],"is_not":false,"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5080"],"synonyms":[{"name":"very-long-chain fatty acid anabolism","type":"exact"},{"name":"very-long-chain fatty acid biosynthesis","type":"exact"},{"name":"very-long-chain fatty acid biosynthetic process","type":"exact"},{"name":"very-long-chain fatty acid formation","type":"exact"},{"name":"very-long-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0042761","terms_by_termid":{"GO:0042761":null}}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: MONDO:0007364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 2E","secondary_identifiers":["UMLS:C1852597","OMIM:121070","MEDGEN:343844","GARD:10135","MESH:C535384"],"synonyms":[{"name":"arthrogryposis, distal, type 2E","type":"exact"},{"name":"contractures of fingers and jaw","type":"related"}],"termid":"MONDO:0007364","xrefs":{"Monarch":{"xref_id":"0007364"}}}


id: MOD:01833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine","termid":"MOD:01833"}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: PBO:0069103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 351, pseudogene","termid":"PBO:0069103"}


id: PR:Q9P7E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing protein 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02186","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein app1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ760.02c","secondary_identifiers":["UniProtKB:Q9P7E8"],"synonyms":[{"name":"Spom972h-SH3D19","type":"exact"}],"termid":"PR:Q9P7E8"}


id: PBO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 13","termid":"PBO:0060112"}


id: SO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts are antisense of ARRET transcripts.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti_ARRET","synonyms":[{"name":"anti-ARRET","type":"exact"}],"termid":"SO:0001926"}


id: PBO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD2 divergent transcript","termid":"PBO:0048652"}


id: PBO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member C","termid":"PBO:0048877"}


id: PBO:0038522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 1","termid":"PBO:0038522"}


id: GO:0047453
data:
  {"annotated_genes":["SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77503],"is_not":false,"summary":null,"term":"GO:0047453"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide adenine dinucleotide + ATP = ADP + H+ + NAD(P)H + phosphate.","definition_xrefs":["PMID:3061454","EC:4.2.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent NAD(P)H-hydrate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:4.2.1.93-RXN","KEGG_REACTION:R00129","Reactome:R-HSA-6806967"],"synonyms":[{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase (ATP-hydrolysing)","type":"related"},{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase(ATP-hydrolysing; NADH-forming)","type":"related"},{"name":"ATP-dependent H(4)NAD(P)OH dehydratase activity","type":"exact"},{"name":"ATP-dependent H4NAD(P)OH dehydratase activity","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide hydrate dehydratase activity","type":"broad"}],"termid":"GO:0047453","terms_by_termid":{"GO:0047453":null}}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:tb","GOC:dos","GOC:elh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: GO:0051077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cell wall structures composed of linear polysaccharides which are deposited at both sides of the primary septum at 90 degrees to the primary septum.","definition_xrefs":["GOC:mtg_sensu","PMID:15194814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum","termid":"GO:0000935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000935"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0000935","GO:0005575"],"is_obsolete":false,"name":"secondary cell septum","synonyms":[{"name":"secondary septum","type":"broad"}],"termid":"GO:0051077"}


id: FYPO:0000521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal peroxisome localization","synonyms":[{"name":"abnormal peroxisomal distribution","type":"exact"},{"name":"abnormal peroxisome localisation","type":"exact"},{"name":"abnormal peroxisome localization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome localization during vegetative growth","type":"exact"},{"name":"peroxisomal distribution: abnormal","type":"related"}],"termid":"FYPO:0000521"}


id: PBO:0114321
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat region consensus DSESESSSEDSDSSSSSS ~7 copies","termid":"PBO:0114321"}


id: PBO:0082114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA carboxylase, biotin containing enzyme; catalyzes carboxylation of cytosolic acetyl-CoA to form malonyl-CoA and regulates histone acetylation by regulating the availability of acetyl-CoA; rate-limiting step for de novo biosynthesis of long-chain fatty acids; translational regulation in response to nutrients and cell cycle stage depends on its upstream ORF; ACC1 has a paralog, HFA1, that arose from the whole genome duplication","termid":"PBO:0082114"}


id: GO:0019335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylquinoline metabolic process","termid":"GO:0018930"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-methylquinoline catabolic process","secondary_identifiers":["MetaCyc:PWY-721"],"synonyms":[{"name":"3-methylquinoline breakdown","type":"exact"},{"name":"3-methylquinoline catabolism","type":"exact"},{"name":"3-methylquinoline degradation","type":"exact"}],"termid":"GO:0019335"}


id: PBO:0027183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027183"}


id: PBO:0089501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ace2","termid":"PBO:0089501"}


id: GO:0046817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with chemokine receptors to reduce the action of a chemokine.","definition_xrefs":["ISBN:0781718325","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0140678","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"chemokine receptor antagonist activity","termid":"GO:0046817"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["MetaCyc:PWY-5298","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0006790","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: PBO:0050085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 5","termid":"PBO:0050085"}


id: PBO:0056203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A11","termid":"PBO:0056203"}


id: GO:0033765
data:
  {"annotated_genes":["SJAG_04954","SJAG_02291"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61450,62371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor, and in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity","termid":"GO:0016229"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"termid":"GO:0033765","terms_by_termid":{"GO:0003865":null}}


id: SO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:regulatory_region_variant","type":"exact"},{"name":"VEP:regulatory_region_variant","type":"exact"},{"name":"regulatory region variant","type":"exact"},{"name":"regulatory_region_","type":"exact"},{"name":"snpEff:REGULATION","type":"exact"}],"termid":"SO:0001566"}


id: PBO:0040042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator 2","termid":"PBO:0040042"}


id: MONDO:1011052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, crab-eating macaque","secondary_identifiers":["OMIA:000807-9541"],"termid":"MONDO:1011052","xrefs":{"Monarch":{"xref_id":"1011052"}}}


id: GO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of any of the extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear body organization","synonyms":[{"name":"nuclear body organisation","type":"exact"},{"name":"nuclear body organization and biogenesis","type":"related"}],"termid":"GO:0030575"}


id: PBO:0029681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_absent_from_cell","termid":"PBO:0029681"}


id: GO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.","definition_xrefs":["PubChem_Compound:1029","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"hydroxylysine metabolic process","synonyms":[{"name":"hydroxylysine metabolism","type":"exact"}],"termid":"GO:0046946"}


id: GO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in an endolysosome. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:10631943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via endolysosomal pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via endolysosomal pathway","type":"exact"}],"termid":"GO:0002487"}


id: GO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the terminal end of a mammary duct bifurcates.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branch elongation involved in mammary gland duct branching","termid":"GO:0060751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis","synonyms":[{"name":"primary mammary duct branching","type":"exact"}],"termid":"GO:0060598"}


id: MONDO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal recessive","secondary_identifiers":["MEDGEN:1794246","UMLS:C5562036","OMIM:619647"],"synonyms":[{"name":"DSKOR","type":"exact"},{"name":"dyskinesia with orofacial involvement, autosomal recessive","type":"exact"}],"termid":"MONDO:0030625","xrefs":{"Monarch":{"xref_id":"0030625"}}}


id: FYPO:0003664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which mRNA 5'-diphosphatase activity is absent.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal RNA pyrophosphohydrolase activity","termid":"FYPO:0003663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished mRNA 5'-diphosphatase activity","synonyms":[{"name":"RNA pyrophosphohydrolase activity abolished","type":"exact"},{"name":"abolished RNA pyrophosphohydrolase activity","type":"related"}],"termid":"FYPO:0003664"}


id: PBO:0026749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_torin1","termid":"PBO:0026749"}


id: MONDO:0009893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A5","secondary_identifiers":["UMLS:C3550661","GARD:18172","OMIM:263450","MEDGEN:763575"],"synonyms":[{"name":"PAPA5","type":"related"},{"name":"polydactyly, postaxial, type A5","type":"exact"}],"termid":"MONDO:0009893","xrefs":{"Monarch":{"xref_id":"0009893"}}}


id: MONDO:0800136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-severe combined immunodeficiency caused by a deficiency in the COPG1 gene.","definition_xrefs":["PMID:33529166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-severe combined immunodeficiency due to COPG1 deficiency","termid":"MONDO:0800136","xrefs":{"Monarch":{"xref_id":"0800136"}}}


id: GO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of saliva from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of saliva secretion","termid":"GO:0046877"}


id: MOD:01632
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine removal","termid":"MOD:01632"}


id: PBO:0081118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6 pseudogene 1","termid":"PBO:0081118"}


id: GO:2000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 type immune response","termid":"GO:2000317"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell differentiation","synonyms":[{"name":"negative regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000320"}


id: PBO:0086773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery","termid":"PBO:0086773"}


id: GO:2000577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000577)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"regulation of minus-end-directed kinesin ATPase activity","type":"related"},{"name":"regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000577"}


id: PBO:0084556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the SWI/SNF chromatin remodeling complex; has an as yet unidentified role in the complex; has identifiable counterparts in closely related yeast species; abundantly expressed in many growth conditions; paralog of Npl6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0084556"}


id: MONDO:0008841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ataxia telangiectasia","termid":"MONDO:0008840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005047"],"is_obsolete":false,"name":"ataxia-telangiectasia with generalized skin pigmentation and early death","secondary_identifiers":["MESH:C565930","OMIM:208910","GARD:15141","MEDGEN:395306","UMLS:C1859615"],"synonyms":[{"name":"ataxia-telangiectasia with generalized skin pigmentation and early death","type":"exact"}],"termid":"MONDO:0008841","xrefs":{"Monarch":{"xref_id":"0008841"}}}


id: GO:0120117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The random-like motility observed for T cells in lymph nodes which enhances surveillance of antigens presented by major histocompatibility complex (MHC) molecules on antigen presenting cells (APCs).","definition_xrefs":["GOC:add","PMID:25083865","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell meandering migration","synonyms":[{"name":"T cell meandering search","type":"exact"},{"name":"lymph node surveillance","type":"related"}],"termid":"GO:0120117"}


id: GO:0046997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a flavin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","secondary_identifiers":["EC:1.5.8.-"],"termid":"GO:0046997"}


id: MONDO:0015805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis caused by botulinum neurotoxins (BoNTs), and is due to intestinal colonization by Clostridium botulinum leading to toxin-mediated infection with toxemia. The disease affects infants (infant botulism) and very rarely adults (adult intestinal botulism).","definition_xrefs":["Orphanet:178481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin-mediated infectious botulism","termid":"MONDO:0016468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal botulism","secondary_identifiers":["DOID:0050141","GARD:20151","UMLS:C1443901","MEDGEN:731170","SCTID:409563004"],"synonyms":[{"name":"intestinal colonisation botulism","type":"exact"},{"name":"intestinal colonization botulism","type":"exact"},{"name":"intestinal toxaemia botulism","type":"exact"},{"name":"intestinal toxemia botulism","type":"exact"},{"name":"intestinal toxin-mediated botulism","type":"exact"}],"termid":"MONDO:0015805","xrefs":{"Monarch":{"xref_id":"0015805"}}}


id: MONDO:0012854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of bilateral microtia with severe to profound hearing impairment, and cleft palate.","definition_xrefs":["Orphanet:140963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral microtia-deafness-cleft palate syndrome","secondary_identifiers":["GARD:16966","UMLS:C2676772","OMIM:612290","MEDGEN:382936","MESH:C567359"],"synonyms":[{"name":"microtia with or without hearing impairment","type":"related"},{"name":"microtia with or without hearing impairment (AD)","type":"exact"},{"name":"microtia, hearing impairment, and cleft palate","type":"related"},{"name":"microtia, hearing impairment, and cleft palate (AR)","type":"exact"}],"termid":"MONDO:0012854","xrefs":{"Monarch":{"xref_id":"0012854"}}}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: PBO:0050524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D12","termid":"PBO:0050524"}


id: MOD:00463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-hydroxy-L-kynurenine.","definition_xrefs":["OMSSA:58","Unimod:350#W","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-hydroxy-L-kynurenine","synonyms":[{"name":"Trp->Hydroxykynurenin","type":"related"},{"name":"hydroxykynureninw","type":"exact"},{"name":"tryptophan oxidation to hydroxykynurenin","type":"related"}],"termid":"MOD:00463"}


id: MONDO:0957875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 11","secondary_identifiers":["MEDGEN:1849676","OMIM:620528","UMLS:C5882697","DOID:0081400"],"termid":"MONDO:0957875","xrefs":{"Monarch":{"xref_id":"0957875"}}}


id: GO:0102189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102189)","termid":"GO:0102189"}


id: SO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter region of RNA polymerase III type 1 promoters.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate_element","synonyms":[{"name":"IE","type":"exact"},{"name":"intermediate element","type":"related"}],"termid":"SO:0001677"}


id: PBO:0074371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMCR8-C9orf72 complex subunit","termid":"PBO:0074371"}


id: PBO:0075861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 9, pseudogene","termid":"PBO:0075861"}


id: MONDO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reducing body myopathy (obsolete MONDO:0000862)","termid":"MONDO:0000862","xrefs":{"Monarch":{"xref_id":"0000862"}}}


id: PBO:0090873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein","termid":"PBO:0090873"}


id: MONDO:0018443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLN1-related developmental delay-central nervous system anomaly-syndactyly syndrome","secondary_identifiers":["MEDGEN:1650412","Orphanet:404451","GARD:21717","UMLS:C4751506"],"termid":"MONDO:0018443","xrefs":{"Monarch":{"xref_id":"0018443"}}}


id: GO:1902672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","GO_REF:0000064","GOC:TermGenie","ISBN:9780124260207","PMID:5961344","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right anterior flagellum","termid":"GO:0097555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right anterior basal body","synonyms":[{"name":"cilial basal body of right anterior cilium","type":"exact"},{"name":"cilial basal body of right anterior flagellum","type":"exact"},{"name":"ciliary basal body of right anterior cilium","type":"exact"},{"name":"ciliary basal body of right anterior flagellum","type":"exact"},{"name":"cilium basal body of right anterior cilium","type":"exact"},{"name":"cilium basal body of right anterior flagellum","type":"exact"},{"name":"microtubule basal body of right anterior cilium","type":"exact"},{"name":"microtubule basal body of right anterior flagellum","type":"exact"},{"name":"right anterior flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902672"}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: PBO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 149","termid":"PBO:0075100"}


id: FYPO:0000507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear export","synonyms":[{"name":"abolished nuclear export during mitotic cell cycle","type":"related"},{"name":"absent nuclear export","type":"exact"},{"name":"nuclear export abolished","type":"exact"},{"name":"nuclear export abolished during vegetative growth","type":"exact"},{"name":"nuclear export: absent","type":"related"}],"termid":"FYPO:0000507"}


id: MONDO:0008667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A familial cancer predisposition syndrome associated with a variety of malignant and benign neoplasms, most frequently retinal, cerebellar, and spinal hemangioblastoma, renal cell carcinoma (RCC), and pheochromocytoma.","definition_xrefs":["Orphanet:892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","termid":"MONDO:0015953"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of central nervous system or retinal vasculature (obsolete MONDO:0020676)","termid":"MONDO:0020676"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Hippel-Lindau disease","secondary_identifiers":["MESH:D006623","icd11.foundation:1985408165","NANDO:2200408","DOID:14175","NORD:1830","OMIM:193300","UMLS:C0019562","GARD:7855","NANDO:2200829","MedDRA:10047716","MEDGEN:42458","NCIT:C3105","ICD9:759.6","SCTID:46659004"],"synonyms":[{"name":"Hippel Lindau syndrome","type":"exact"},{"name":"Lindau disease","type":"exact"},{"name":"VHL","type":"exact"},{"name":"VHL syndrome","type":"related"},{"name":"Von Hippel Lindau disease","type":"related"},{"name":"Von Hippel-Lindau syndrome","type":"exact"},{"name":"Von Hippel-Lindau syndrome (VHL)","type":"exact"},{"name":"Von Hippel-Lindau syndrome, Modifiers of","type":"related"},{"name":"cerebroretinal angiomatosis","type":"exact"},{"name":"familial cerebelloretinal angiomatosis","type":"exact"},{"name":"von Hippel-Lindau disease","type":"exact"},{"name":"von Hippel-Lindau syndrome","type":"exact"},{"name":"von Hippel-Lindau syndrome, modifier of","type":"exact"}],"termid":"MONDO:0008667","xrefs":{"Monarch":{"xref_id":"0008667"}}}


id: GO:0035465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of the lateral plate mesoderm with respect to its left and right halves.","definition_xrefs":["GOC:dgh","PMID:15084459"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0035465)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0035465"}


id: GO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to somitogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in somitogenesis","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090243"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: PBO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Tlh1","termid":"PBO:0004977"}


id: PBO:0005404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology protein (predicted)","termid":"PBO:0005404"}


id: MOD:00922
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Cy3 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy3 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy3","type":"related"}],"termid":"MOD:00922"}


id: MONDO:0010257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 1","secondary_identifiers":["MEDGEN:339479","OMIM:300147","UMLS:C1846279","GARD:15253"],"synonyms":[{"name":"HPCX1","type":"exact"},{"name":"prostate cancer susceptibility, X-linked","type":"related"},{"name":"prostate cancer, hereditary, X-linked 1","type":"exact"}],"termid":"MONDO:0010257","xrefs":{"Monarch":{"xref_id":"0010257"}}}


id: PBO:0041166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG2 divergent transcript","termid":"PBO:0041166"}


id: PATO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"h minus","synonyms":[{"name":"M","type":"exact"},{"name":"h -","type":"exact"}],"termid":"PATO:0001345"}


id: GO:0009577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an elaioplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"elaioplast","termid":"GO:0009545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"elaioplast stroma","termid":"GO:0009577"}


id: GO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 = 2-formamidobenzaldehyde.","definition_xrefs":["EC:1.13.11.17","RHEA:11212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02338","MetaCyc:INDOLE-23-DIOXYGENASE-RXN"],"synonyms":[{"name":"IDO","type":"related"},{"name":"indole oxidase activity","type":"related"},{"name":"indole-oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"indole:O2 oxidoreductase activity","type":"related"},{"name":"indole:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047719"}


id: PBO:0040126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 12","termid":"PBO:0040126"}


id: PBO:0087070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L34B; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34B has a paralog, RPL34A, that arose from the whole genome duplication","termid":"PBO:0087070"}


id: MONDO:1011674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperosmolar nonketotic diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000280"],"termid":"MONDO:1011674","xrefs":{"Monarch":{"xref_id":"1011674"}}}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: _global:existence_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"_global:existence_ends_during_or_before"},{"relation_name":"is_a","term_name":"existence_overlaps","termid":"_global:existence_overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","secondary_identifiers":["RO:0002492"],"termid":"_global:existence_ends_during"}


id: PBO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAQ-box RNA dependent ATPase 1","termid":"PBO:0045453"}


id: PBO:0080864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 5","termid":"PBO:0080864"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: MONDO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tinea corporis that results in fungal infection located in skin, has material basis in Trichophyton concentricum, which is characterized by ring-like growth in overlapping circles that may have an autosomal dominant genetic predisposition.","definition_xrefs":["DOID:0050116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea corporis","termid":"MONDO:0001461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea imbricata","secondary_identifiers":["MEDGEN:508199","SCTID:240699006","UMLS:C0040255","ICD10CM:B35.5"],"termid":"MONDO:0000245","xrefs":{"Monarch":{"xref_id":"0000245"}}}


id: FYPO:0006300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere inner repeat regions is increased.","definition_xrefs":["PomBase:mah","PMID:16797182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"increased protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"increased protein localization to chromatin at centromere imr","type":"exact"},{"name":"increased protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006300"}


id: PBO:0091208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His","termid":"PBO:0091208"}


id: PR:Q9URZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1 gene.","definition_xrefs":["UniProtKB:Q9URZ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC767.01c","synonyms":[{"name":"Spom972h-vps1","type":"exact"}],"termid":"PR:Q9URZ5"}


id: MONDO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, myofibrillar (obsolete MONDO:0000071)","termid":"MONDO:0000071","xrefs":{"Monarch":{"xref_id":"0000071"}}}


id: PBO:0031483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_pigment_accumulation_phenotype","termid":"PBO:0031483"}


id: GO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somitogenesis (obsolete GO:0090236)","termid":"GO:0090236"}


id: PBO:0071100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 102","termid":"PBO:0071100"}


id: PBO:0070288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 29","termid":"PBO:0070288"}


id: PBO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA (N6-adenosine)-methyltransferase (predicted)","termid":"PBO:0000570"}


id: GO:0016204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the cells of a muscle to those of its intended target, thereby identifying the target site.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"muscle attachment","termid":"GO:0016203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"determination of muscle attachment site","termid":"GO:0016204"}


id: PBO:0075913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 5","termid":"PBO:0075913"}


id: PBO:0074697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70G","termid":"PBO:0074697"}


id: GO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the beta-(1->4) linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan.","definition_xrefs":["EC:3.2.1.17","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysozyme activity","secondary_identifiers":["Reactome:R-HSA-8862320","MetaCyc:3.2.1.17-RXN"],"synonyms":[{"name":"1,4-N-acetylmuramidase activity","type":"exact"},{"name":"L-7001","type":"related"},{"name":"N,O-diacetylmuramidase activity","type":"exact"},{"name":"PR1-lysozyme","type":"related"},{"name":"globulin G","type":"related"},{"name":"globulin G1","type":"related"},{"name":"lysozyme g","type":"related"},{"name":"mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"mucopeptide glucohydrolase activity","type":"exact"},{"name":"muramidase activity","type":"exact"},{"name":"peptidoglycan N-acetylmuramoylhydrolase activity","type":"related"}],"termid":"GO:0003796"}


id: PBO:0052987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 2","termid":"PBO:0052987"}


id: PBO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 pseudogene 2","termid":"PBO:0060702"}


id: FYPO:0007149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N-methyl-N'-nitro-N-nitrosoguanidine (MNNG).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"normal cell population growth in presence of N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"normal cell population growth on MNNG","type":"exact"},{"name":"normal cell population growth on N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"normal vegetative cell population growth on N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"}],"termid":"FYPO:0007149"}


id: GO:1903413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GOC:BHF","PMID:21757002","GOC:TermGenie","GO_REF:0000071","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bile acid","termid":"GO:1903412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bile acid","termid":"GO:1903413"}


id: PBO:0089401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor complex RNA-binding subunit Pcf11","termid":"PBO:0089401"}


id: PR:000085738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at the second and fifth positions of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:11387325"],"direct_ancestors":[{"relation_name":"has_part","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:1","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5)","type":"exact"}],"termid":"PR:000085738"}


id: PBO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_type","termid":"PBO:0011954"}


id: MONDO:1012429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dysplasia and internal hydrocephalus, non-human animal","termid":"MONDO:1011887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and internal hydrocephalus, cattle","secondary_identifiers":["OMIA:001663-9913"],"termid":"MONDO:1012429","xrefs":{"Monarch":{"xref_id":"1012429"}}}


id: PBO:0067914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 216","termid":"PBO:0067914"}


id: PBO:0069425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 689, pseudogene","termid":"PBO:0069425"}


id: GO:0043611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoprene, C5H8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprene metabolic process","synonyms":[{"name":"2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"hemiterpene metabolic process","type":"exact"},{"name":"hemiterpene metabolism","type":"exact"},{"name":"isoprene metabolism","type":"exact"}],"termid":"GO:0043611"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: MONDO:0002887
data:
  {"annotated_genes":["SJAG_03011","SJAG_03363","SJAG_05194","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[86936,86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[86874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"A disease involving the bile duct.","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C96716","MESH:D001649","MEDGEN:2240","SCTID:118926004","UMLS:C0005395","DOID:4138"],"synonyms":[{"name":"bile duct disease","type":"exact"},{"name":"bile duct disease or disorder","type":"exact"},{"name":"bile duct disorder","type":"exact"},{"name":"disease of bile duct","type":"exact"},{"name":"disease or disorder of bile duct","type":"exact"},{"name":"disorder of bile duct","type":"exact"}],"termid":"MONDO:0002887","terms_by_termid":{"MONDO:0010939":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0002887"}}}


id: PBO:0038816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 3","termid":"PBO:0038816"}


id: PBO:0080403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 retromer complex component","termid":"PBO:0080403"}


id: PBO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 55","termid":"PBO:0070589"}


id: PBO:0089838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Syf2","termid":"PBO:0089838"}


id: PBO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis15","termid":"PBO:0003629"}


id: MONDO:0015739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult-onset nemaline myopathy is a rapidly progressive type of nemaline myopathy (NM) characterized by a very late onset.","definition_xrefs":["Orphanet:171442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"adult-onset nemaline myopathy","secondary_identifiers":["icd11.foundation:1610331066","MEDGEN:154264","GARD:12824","UMLS:C0546123"],"termid":"MONDO:0015739","xrefs":{"Monarch":{"xref_id":"0015739"}}}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: MONDO:0020693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of phosphorylase kinase deficiency caused by variants in PHKA2 or PHKG2 and characterized by hepatomegaly, growth retardation, and mild delay in motor development during childhood.","definition_xrefs":["Orphanet:264580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"glycogen storage disease due to liver phosphorylase kinase deficiency","secondary_identifiers":["GARD:17261","MEDGEN:453209","UMLS:C2012260"],"termid":"MONDO:0020693","xrefs":{"Monarch":{"xref_id":"0020693"}}}


id: MONDO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of idiopathic urticaria.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"idiopathic urticaria","termid":"MONDO:0044211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute idiopathic urticaria","secondary_identifiers":["UMLS:C0578869","MEDGEN:662266","SCTID:302161006"],"synonyms":[{"name":"acute idiopathic urticaria","type":"exact"},{"name":"idiopathic urticaria, acute","type":"exact"}],"termid":"MONDO:0044213","xrefs":{"Monarch":{"xref_id":"0044213"}}}


id: PBO:0041266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 3","termid":"PBO:0041266"}


id: PBO:0068020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 325","termid":"PBO:0068020"}


id: PBO:0070754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 10","termid":"PBO:0070754"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_00203","SJAG_01671","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[66227,75950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00412","GO:0019739"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: PBO:0060178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2","termid":"PBO:0060178"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: MONDO:0014722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"RNU4ATAC spectrum disorder","termid":"MONDO:0100558"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005046"],"is_obsolete":false,"name":"Roifman syndrome","secondary_identifiers":["Orphanet:353298","GARD:9163","OMIM:616651","MEDGEN:375801","OMIM:300258","UMLS:C1846059","MESH:C535866"],"synonyms":[{"name":"RFMN","type":"exact"},{"name":"Roifman syndrome","type":"exact"},{"name":"spondyloepiphseal dysplasia, retinal dystrophy and antibody deficiency","type":"related"},{"name":"spondyloepiphyseal dysplasia, retinal dystrophy, and antibody deficiency","type":"exact"},{"name":"spondyloepiphyseal dysplasia-retinal dystrophy-immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0014722","xrefs":{"Monarch":{"xref_id":"0014722"}}}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["DOID:262","MEDGEN:1847044","SCTID:254923001","UMLS:C5848097","NCIT:C4527"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: PBO:0064979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 35, pseudogene","termid":"PBO:0064979"}


id: PBO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 11","termid":"PBO:0072081"}


id: PBO:0084265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; EMP46 has a paralog, EMP47, that arose from the whole genome duplication","termid":"PBO:0084265"}


id: PBO:0063851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 4","termid":"PBO:0063851"}


id: GO:0102824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-7-olate + UDP-L-rhamnose = H+ + quercetin 3-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:quercetin 3-O-rhamnosyltransferase activity (obsolete GO:0102824)","termid":"GO:0102824"}


id: MONDO:0017407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency, common variable, 10","termid":"MONDO:0014260"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"deficiency in anterior pituitary function - variable immunodeficiency syndrome","secondary_identifiers":["MEDGEN:1666981","GARD:17353","Orphanet:293978","UMLS:C4751122"],"synonyms":[{"name":"David syndrome","type":"exact"}],"termid":"MONDO:0017407","xrefs":{"Monarch":{"xref_id":"0017407"}}}


id: GO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose metabolic process","synonyms":[{"name":"GDP-D-rhamnose metabolism","type":"exact"}],"termid":"GO:0046382"}


id: PBO:0053474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 443","termid":"PBO:0053474"}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: PBO:0056706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotransferrin","termid":"PBO:0056706"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: GO:1902941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GOC:als","PMID:22006324","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of voltage-gated chloride channel activity (obsolete GO:1902941)","synonyms":[{"name":"regulation of voltage gated chloride channel activity","type":"exact"},{"name":"regulation of voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:1902941"}


id: MONDO:0700041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 2","secondary_identifiers":["UMLS:C2751682","MEDGEN:416607","OMIM:613013"],"synonyms":[{"name":"NBLST2","type":"exact"},{"name":"neuroblastoma, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to neuroblastoma 2","type":"exact"}],"termid":"MONDO:0700041","xrefs":{"Monarch":{"xref_id":"0700041"}}}


id: PBO:0087674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the membrane-associated retromer complex; endosomal protein; essential for endosome-to-Golgi retrograde transport; forms a subcomplex with Vps35p and Vps26p that selects cargo proteins for endosome-to-Golgi retrieval","termid":"PBO:0087674"}


id: PBO:0109281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTRES1 pseudogene 2","termid":"PBO:0109281"}


id: PBO:0065018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 2","termid":"PBO:0065018"}


id: FYPO:0000121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation","synonyms":[{"name":"abnormal ascospore formation","type":"exact"},{"name":"sporulation defects","type":"exact"},{"name":"sporulation: abnormal","type":"related"}],"termid":"FYPO:0000121"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_04522","SJAG_01373","SJAG_00845","SJAG_00317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[103701,112488,107626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: MONDO:1011988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and degeneration, non-human animal","secondary_identifiers":["OMIA:001366"],"termid":"MONDO:1011988","xrefs":{"Monarch":{"xref_id":"1011988"}}}


id: PBO:0116589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAD1 antisense RNA 1","termid":"PBO:0116589"}


id: MONDO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XH antigen","secondary_identifiers":["MESH:C009691","OMIM:314800","UMLS:C3887689","MEDGEN:854528"],"synonyms":[{"name":"XH antigen","type":"exact"}],"termid":"MONDO:0010760","xrefs":{"Monarch":{"xref_id":"0010760"}}}


id: GO:2000095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"regulation of PCP pathway","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of Wnt-JNK signaling pathway","type":"related"},{"name":"regulation of Wnt-PCP signaling pathway","type":"related"},{"name":"regulation of Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"regulation of non-canonical Wnt signaling pathway","type":"related"}],"termid":"GO:2000095"}


id: PBO:0034701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4 (predicted)","termid":"PBO:0034701"}


id: FYPO:0003444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move in random directions such that they do not undergo an overall movement towards the cell center. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PomBase:mah","PMID:24798735","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"abnormal medial cortical node condensation","synonyms":[{"name":"abnormal medial cortical node condensation during mitotic cell cycle","type":"related"},{"name":"abnormal medial cortical node condensation during vegetative growth","type":"exact"},{"name":"abnormal medial cortical node migration","type":"exact"}],"termid":"FYPO:0003444"}


id: PBO:0041331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 92","termid":"PBO:0041331"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: MONDO:0700181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrosarcoma that occurs in a cat.","definition_xrefs":["NCIT:C134560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline fibrosarcoma","termid":"MONDO:0700181","xrefs":{"Monarch":{"xref_id":"0700181"}}}


id: FYPO:0001798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"decreased gene expression","termid":"FYPO:0006549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased translation","synonyms":[{"name":"decreased protein biosynthesis","type":"exact"},{"name":"decreased protein synthesis","type":"exact"},{"name":"decreased rate of protein synthesis","type":"narrow"},{"name":"decreased translation during mitotic cell cycle","type":"related"},{"name":"decreased translation during vegetative growth","type":"exact"},{"name":"reduced translation","type":"exact"}],"termid":"FYPO:0001798"}


id: PBO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 48","termid":"PBO:0052680"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["RHEA:13453","EC:2.8.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02159"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: GO:0010331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gibberellin, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"gibberellin binding","synonyms":[{"name":"gibberellic acid receptor","type":"related"},{"name":"gibberellin receptor","type":"related"}],"termid":"GO:0010331"}


id: PBO:0089623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Sec65","termid":"PBO:0089623"}


id: MONDO:0019040
data:
  {"annotated_genes":["SJAG_03635","SJAG_04884","SJAG_03436","SJAG_01465","SJAG_03424","SJAG_02035","SJAG_00112","SJAG_04324","SJAG_01286","SJAG_00786","SJAG_02317","SJAG_02231","SJAG_01082","SJAG_03286","SJAG_03898","SJAG_00213","SJAG_02846","SJAG_04699","SJAG_02795","SJAG_00441","SJAG_03244","SJAG_04663","SJAG_01548","SJAG_01806","SJAG_01804"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[86951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[86121,86120,86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013256"},{"annotations":[86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[86743,86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[85892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[85575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"},{"annotations":[85685,85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[86233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[85946,85950,85951,85952,85949,85948,85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"},{"annotations":[85569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Clinical conditions caused by an abnormal chromosome constitution in which there is extra or missing chromosome material (either a whole chromosome or a chromosome segment). (from Thompson et al., Genetics in Medicine, 5th ed, p429)","definition_xrefs":["MESH:D025063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00213":null,"SJAG_00441":null,"SJAG_00786":null,"SJAG_01082":null,"SJAG_01286":null,"SJAG_01465":null,"SJAG_01548":null,"SJAG_01804":null,"SJAG_01806":null,"SJAG_02035":null,"SJAG_02231":null,"SJAG_02317":null,"SJAG_02795":null,"SJAG_02846":null,"SJAG_03244":null,"SJAG_03286":null,"SJAG_03424":null,"SJAG_03436":null,"SJAG_03635":null,"SJAG_03898":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:Q90-Q99","NCIT:C34470","MEDGEN:3441","NANDO:2100279","SCTID:409709004","UMLS:C0008626","Orphanet:68335","ICD9:758.89","NANDO:2100280","DOID:0080014","NANDO:1100014"],"synonyms":[{"name":"autosomal chromosome disorder","type":"related"},{"name":"autosomal chromosome disorders","type":"related"},{"name":"chromosomal disease","type":"exact"},{"name":"chromosomal disorder","type":"exact"},{"name":"chromosomal disorders","type":"exact"},{"name":"chromosome abnormality disorder","type":"related"},{"name":"chromosome abnormality disorders","type":"related"},{"name":"chromosome disorder","type":"exact"},{"name":"chromosome disorder, autosomal","type":"related"},{"name":"chromosome disorders, autosomal","type":"related"},{"name":"disorder, chromosomal","type":"exact"},{"name":"disorder, chromosome","type":"exact"},{"name":"disorder, chromosome abnormality","type":"related"},{"name":"disorders, chromosomal","type":"exact"},{"name":"disorders, chromosome","type":"exact"}],"termid":"MONDO:0019040","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008644":null,"MONDO:0008684":null,"MONDO:0008876":null,"MONDO:0009759":null,"MONDO:0010334":null,"MONDO:0010767":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0013256":null,"MONDO:0013582":null,"MONDO:0014848":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0019040"}}}


id: MONDO:0006319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nevus of Ota (obsolete MONDO:0006319)","termid":"MONDO:0006319","xrefs":{"Monarch":{"xref_id":"0006319"}}}


id: PBO:0077325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63A","termid":"PBO:0077325"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: FYECO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeSO4","synonyms":[{"name":"iron sulfate added","type":"exact"},{"name":"iron sulphate added","type":"exact"}],"termid":"FYECO:0000186"}


id: GO:1900348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"}


id: PBO:0116815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 5","termid":"PBO:0116815"}


id: MONDO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital tracheomalacia is a rare condition where the trachea is soft and flexible causing the tracheal wall to collapse when exhaling, coughing or crying, that usually presents in infancy, and that is characterized by stridor and noisy breathing or upper respiratory infections. Tracheomalacia improves by the age of 18-24 months.","definition_xrefs":["Orphanet:95430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheomalacia","secondary_identifiers":["HP:0002779","NCIT:C98634","UMLS:C0948187","icd11.foundation:1616705280","icd11.foundation:303133490","NANDO:2200195","NORD:2028","SCTID:95467005","ICD9:748.3","DOID:0060313","GARD:10515","MedDRA:10010654","MEDGEN:215296","MESH:D055090"],"synonyms":[{"name":"Congenital Tracheomalacia","type":"exact"},{"name":"congenital major airway collapse","type":"exact"},{"name":"congenital tracheomalacia","type":"exact"},{"name":"tracheomalacia, congenital","type":"related"},{"name":"type 1 tracheomalacia","type":"related"}],"termid":"MONDO:0019804","xrefs":{"Monarch":{"xref_id":"0019804"}}}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: GO:0043472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of a D isotype.","definition_xrefs":["PMID:12886015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgD binding","termid":"GO:0043472"}


id: MONDO:0012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FTSD (obsolete MONDO:0012649)","termid":"MONDO:0012649","xrefs":{"Monarch":{"xref_id":"0012649"}}}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: GO:0050071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + L-lysyl-tRNA(Lys) = 1,2-diacyl-sn-glycero-3-phospho-1'-(3'-O-L-lysyl)-sn-glycerol + tRNA(Lys).","definition_xrefs":["EC:2.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"phosphatidylglycerol lysyltransferase activity","secondary_identifiers":["MetaCyc:LYSYLTRANSFERASE-RXN","RHEA:10668"],"synonyms":[{"name":"lysylphosphatidylglycerol synthase activity","type":"exact"},{"name":"lysyltransferase activity","type":"broad"}],"termid":"GO:0050071"}


id: GO:0007107
data:
  {"annotated_genes":["SJAG_03915","SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91259,99764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"}]},"cv_name":"biological_process","definition":"Any process involved in the net addition of membrane at the site of cytokinesis; includes vesicle recruitment and fusion, local lipid synthesis and insertion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03915":null,"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"membrane addition at site of cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytokinesis, membrane recruitment/generation","type":"exact"}],"termid":"GO:0007107","terms_by_termid":{"GO:0061796":null}}


id: MONDO:0023186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser Jequier Chen syndrome","secondary_identifiers":["MEDGEN:419665","MESH:C535481","UMLS:C2930912"],"synonyms":[{"name":"chondrodysplasia, situs inversus totalis, cleft epiglottis and larynx, hexadactyly of hands and feet, pancreatic cystic dysplasia, renal dysplasia/abs","type":"related"}],"termid":"MONDO:0023186","xrefs":{"Monarch":{"xref_id":"0023186"}}}


id: GO:0020011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plastid organelle found in apicomplexans.","definition_xrefs":["ISBN:0521664470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apicoplast","secondary_identifiers":["Wikipedia:Apicoplast"],"termid":"GO:0020011"}


id: PBO:0066748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 46","termid":"PBO:0066748"}


id: MONDO:0015708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immuno-osseous dysplasia","secondary_identifiers":["Orphanet:169349","GARD:20115","icd11.foundation:1948303413","MEDGEN:609410","SCTID:254067002","UMLS:C0432218"],"termid":"MONDO:0015708","xrefs":{"Monarch":{"xref_id":"0015708"}}}


id: PR:O74881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inhibitor of Bruton tyrosine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04198","PANTHER:PTHR22872:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.11","secondary_identifiers":["UniProtKB:O74881"],"synonyms":[{"name":"Spom972h-IBTK","type":"exact"}],"termid":"PR:O74881"}


id: GO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate catabolic process","synonyms":[{"name":"2-deoxyribose 1-phosphate breakdown","type":"exact"},{"name":"2-deoxyribose 1-phosphate catabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate degradation","type":"exact"},{"name":"deoxyribose 1-phosphate catabolic process","type":"exact"}],"termid":"GO:0006018"}


id: MONDO:0009401
data:
  {"annotated_genes":["SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86658],"is_not":false,"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia type 2 is an autosomal recessive proline metabolism disorder due to pyroline-5-carboxylate dehydrogenase deficiency. The condition is often benign but clinical signs may include seizures, intellectual deficit and mild developmental delay.","definition_xrefs":["Orphanet:79101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperprolinemia","termid":"MONDO:0023419"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperprolinemia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:717181004","OMIM:239510","UMLS:C2931835","MedDRA:10058514","MESH:C538385","GARD:6710","DOID:0080543","MedDRA:10058512","MEDGEN:419175"],"synonyms":[{"name":"1 alpha pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"1-pyrroline-5-carboxylate dehydrogenase activity disease","type":"exact"},{"name":"1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"ALDH4A1 hyperprolinemia","type":"exact"},{"name":"HPII","type":"related"},{"name":"HYRPRO2","type":"related"},{"name":"delta-1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"delta1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"disorder of 1-pyrroline-5-carboxylate dehydrogenase activity","type":"exact"},{"name":"hyperprolinemia caused by mutation in ALDH4A1","type":"exact"},{"name":"hyperprolinemia type 2","type":"exact"},{"name":"hyperprolinemia, type 2","type":"related"},{"name":"hyperprolinemia, type II","type":"related"},{"name":"type 2 hyperprolinemia","type":"related"}],"termid":"MONDO:0009401","terms_by_termid":{"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0009401"}}}


id: MOD:01439
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[2-(pyridin-4-yl)ethyl]-L-cysteine.","definition_xrefs":["PubMed:18688235","PubMed:6528972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-pyridylethyl-L-cysteine","termid":"MOD:00424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-[2-(pyridin-4-yl)ethyl]-L-cysteine","synonyms":[{"name":"4-PEC","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-(pyridin-4-ylethyl)-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"}],"termid":"MOD:01439"}


id: PBO:0109258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member A opposite strand","termid":"PBO:0109258"}


id: PBO:0086610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086610"}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:15031569","PMID:12548288","PMID:14718540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: GO:1901406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole catabolic process","synonyms":[{"name":"activation of tetrapyrrole breakdown","type":"exact"},{"name":"activation of tetrapyrrole catabolic process","type":"narrow"},{"name":"activation of tetrapyrrole catabolism","type":"exact"},{"name":"activation of tetrapyrrole degradation","type":"exact"},{"name":"positive regulation of tetrapyrrole breakdown","type":"exact"},{"name":"positive regulation of tetrapyrrole catabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole degradation","type":"exact"},{"name":"up regulation of tetrapyrrole breakdown","type":"exact"},{"name":"up regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"up regulation of tetrapyrrole catabolism","type":"exact"},{"name":"up regulation of tetrapyrrole degradation","type":"exact"},{"name":"up-regulation of tetrapyrrole breakdown","type":"exact"},{"name":"up-regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"up-regulation of tetrapyrrole catabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole degradation","type":"exact"},{"name":"upregulation of tetrapyrrole breakdown","type":"exact"},{"name":"upregulation of tetrapyrrole catabolic process","type":"exact"},{"name":"upregulation of tetrapyrrole catabolism","type":"exact"},{"name":"upregulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901406"}


id: PBO:0047555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 12","termid":"PBO:0047555"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: PBO:0081866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804B","termid":"PBO:0081866"}


id: PBO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 1 domain containing 1","termid":"PBO:0048723"}


id: SO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"CDS region corresponding to a transit peptide region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transit_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"transit peptide region of CDS","type":"exact"}],"termid":"SO:0002252"}


id: PBO:0083143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 5' end of ORF YMR317W","termid":"PBO:0083143"}


id: GO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["PMID:14665680","PMID:16020688","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0044281","GO:0071554"],"is_obsolete":false,"name":"wall teichoic acid biosynthetic process","synonyms":[{"name":"WTA biosynthetic process","type":"exact"},{"name":"wall teichoic acid anabolism","type":"exact"},{"name":"wall teichoic acid biosynthesis","type":"exact"},{"name":"wall teichoic acid formation","type":"exact"},{"name":"wall teichoic acid synthesis","type":"exact"}],"termid":"GO:0070398"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: PBO:0041939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 7","termid":"PBO:0041939"}


id: PR:O94472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pbn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.02","synonyms":[{"name":"Spom972h-SPCC1919.02","type":"exact"}],"termid":"PR:O94472"}


id: GO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoate + NAD+ = H+ + NADH + succinate semialdehyde.","definition_xrefs":["RHEA:23948","EC:1.1.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01644"],"synonyms":[{"name":"4-hydroxybutanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"gamma-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0047577"}


id: PBO:0012850
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial nephritis, karyomegalic","termid":"PBO:0012850"}


id: MONDO:0020382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal pattern dystrophy simulating fundus flavimaculatus is a patterned dystrophy of the retinal pigment epithelium characterized by multiple yellowish irregular flecks scattered or interconnected around the macula, simulating what is observed in Stargardt disease, and usually asymptomatic until adulthood when patients present with a slowly progressive loss of vision that often only becomes apparent in old age.","definition_xrefs":["Orphanet:99003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal pattern dystrophy simulating fundus flavimaculatus","secondary_identifiers":["MEDGEN:1376850","GARD:19612","UMLS:C4509881","SCTID:723408004","ICD10CM:H35.5","icd11.foundation:1819044742"],"synonyms":[{"name":"multifocal pattern dystrophy simulating Stargardt disease","type":"exact"}],"termid":"MONDO:0020382","xrefs":{"Monarch":{"xref_id":"0020382"}}}


id: FYPO:0005951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:28218250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy in euchromatin","termid":"FYPO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at highly transcribed RNA polymerase II genes","type":"exact"}],"termid":"FYPO:0005951"}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["PMID:6170061","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: GO:0051286
data:
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id: PBO:0003922
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id: PBO:0067339
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id: MONDO:0005181
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id: GO:1903568
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id: MONDO:0012914
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id: PBO:0047925
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id: MONDO:0002038
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the head and neck region. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C35850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3887461","DOID:1542","MEDGEN:854345"],"synonyms":[{"name":"carcinoma of craniocervical region","type":"exact"},{"name":"carcinoma of head and neck","type":"exact"},{"name":"carcinoma of neck","type":"exact"},{"name":"carcinoma of the head and neck","type":"exact"},{"name":"carcinoma of the neck","type":"narrow"},{"name":"craniocervical region carcinoma","type":"exact"},{"name":"head and neck cancer","type":"related"},{"name":"head and neck carcinoma","type":"exact"},{"name":"neck carcinoma","type":"exact"}],"termid":"MONDO:0002038","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002038"}}}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: GO:1901404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of tetrapyrrole catabolic process","synonyms":[{"name":"regulation of tetrapyrrole breakdown","type":"exact"},{"name":"regulation of tetrapyrrole catabolism","type":"exact"},{"name":"regulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901404"}


id: MONDO:0009274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ghosal hematodiaphyseal dysplasia syndrome (GHDD) is a rare disorder characterized by increased bone density (predominantly diaphyseal) and aregenerative corticosteroid-sensitive anemia.","definition_xrefs":["Orphanet:1802"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghosal hematodiaphyseal dysplasia","secondary_identifiers":["MEDGEN:344739","GARD:10297","DOID:0112251","ICD9:756.59","OMIM:231095","SCTID:389214003","UMLS:C1856465","MESH:C565551"],"synonyms":[{"name":"GHDD","type":"related"},{"name":"GHOSAL hematodiaphyseal dysplasia","type":"related"},{"name":"Ghosal hematodiaphyseal dysplasia syndrome","type":"related"},{"name":"Ghosal hematodiaphyseal syndrome","type":"exact"},{"name":"Ghosal syndrome","type":"exact"},{"name":"diaphyseal dysplasia-anemia syndrome","type":"exact"},{"name":"ghosal hematodiaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0009274","xrefs":{"Monarch":{"xref_id":"0009274"}}}


id: RO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s determined by f if and only if s is a type of system, and f is a material entity that is part of s, such that f exerts a strong causal influence on the functioning of s, and the removal of f would cause the collapse of s.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"determined_by_part_of","termid":"RO:0002509"},{"relation_name":"is_a","term_name":"causally_influenced_by","termid":"RO:0002559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by","termid":"RO:0002507"}


id: PBO:0004700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm6","termid":"PBO:0004700"}


id: PBO:0067158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 210, pseudogene","termid":"PBO:0067158"}


id: GO:0019869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"chloride channel regulator activity","termid":"GO:0017081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"chloride channel inhibitor activity","termid":"GO:0019869"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: PBO:0030253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level_during_heat_shock","termid":"PBO:0030253"}


id: GO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Co-chaperones are proteins that bind to chaperones and this complex then folds misfolded proteins. Co-chaperones by themselves do not possess chaperone activity.","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete co-chaperone activity (obsolete GO:0003767)","synonyms":[{"name":"co-chaperone activity","type":"exact"}],"termid":"GO:0003767"}


id: PBO:0086825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL050c is not an essential gene","termid":"PBO:0086825"}


id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: FYPO:0004119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is elongated, has more than one nucleus, has one or more septa with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multinucleate cell with abnormal septum formation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004119"}


id: MONDO:0006556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin conditions characterized by dense infiltration of inflammatory cells (neutrophils) in the affected tissue. They arise in reaction to some underlying systemic illness. A neutrophilic dermatosis may be seen in isolation or more than one type may occur in the same individual.","definition_xrefs":["EFO:1000706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hand dermatosis","secondary_identifiers":["UMLS:C0018567","MESH:D006229","DOID:3158","MEDGEN:6718"],"termid":"MONDO:0006556","xrefs":{"Monarch":{"xref_id":"0006556"}}}


id: SO:1000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When no simple or well defined DNA mutation event describes the observed DNA change, the keyword \\\"complex\\\" should be used. Usually there are multiple equally plausible explanations for the change.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_substitution","synonyms":[{"name":"complex substitution","type":"exact"}],"termid":"SO:1000005"}


id: PBO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 14","termid":"PBO:0070861"}


id: GO:0010748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import across plasma membrane","termid":"GO:0010746"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of long-chain fatty acid import into cell","termid":"GO:0140213"},{"relation_name":"negatively_regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"negative regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010748"}


id: PBO:0012828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-present_during","termid":"PBO:0012828"}


id: PBO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0035993"}


id: PBO:0116625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 2, pseudogene","termid":"PBO:0116625"}


id: PBO:0113111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component involved in endocytosis; mitochondria phosphoprotein that localizes to the outer membrane and is involved in maintaining mitochondrial morphology and mitophagy; phosphorylated (T233) upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutant shows activation of Pkc1p/Ypk1p stress resistance pathways; BAR domain family member; protein increases in abundance and relocalizes from the plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0113111"}


id: PR:Q9USQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chromosome transmission fidelity protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23389:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.02c","secondary_identifiers":["UniProtKB:Q9USQ1"],"synonyms":[{"name":"SPBC902.02c","type":"related"},{"name":"Spom972h-CHTF18","type":"exact"},{"name":"chl12","type":"related"}],"termid":"PR:Q9USQ1"}


id: GO:0032422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 30-bp purine-rich negative regulatory element; the best characterized such element is found in the first intronic region of the rat cardiac alpha-myosin heavy chain gene, and contains two palindromic high-affinity Ets-binding sites (CTTCCCTGGAAG). The presence of this element restricts expression of the gene containing it to cardiac myocytes.","definition_xrefs":["PMID:9819411","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"purine-rich negative regulatory element binding","synonyms":[{"name":"PNR element binding","type":"broad"}],"termid":"GO:0032422"}


id: MONDO:0012161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Susceptibility to respiratory infections associated with CD8 alpha chain mutation is a rare primary immunodeficiency due to a defect in adaptive immunity characterized by the absence of CD8+ T cells with normal immunoglobulin and specific antibody titres in blood and susceptibility to recurrent respiratory bacterial and viral infections. Symptom severity range from fatal respiratory insufficiency to mild or asymptomatic phenotypes.","definition_xrefs":["Orphanet:169085"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","secondary_identifiers":["NANDO:1200326","MEDGEN:323058","MESH:C563824","NANDO:2200699","UMLS:C1837065","OMIM:608957","SCTID:766983005"],"synonyms":[{"name":"CD8 deficiency, familial","type":"related"},{"name":"familial CD8 deficiency","type":"exact"},{"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","type":"exact"}],"termid":"MONDO:0012161","xrefs":{"Monarch":{"xref_id":"0012161"}}}


id: PBO:0059759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 33","termid":"PBO:0059759"}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: GO:0071413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyisoflavone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroxyisoflavone","termid":"GO:0033594"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to phenylpropanoid","termid":"GO:1905546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydroxyisoflavone","termid":"GO:0071413"}


id: PBO:0049548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 11","termid":"PBO:0049548"}


id: GO:0098515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a low humidity stimulus is detected and converted into a molecular signal as a part of the sensory detection of low humidity.","definition_xrefs":["PMID:18269908","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity stimulus involved in sensory perception","termid":"GO:0098512"},{"relation_name":"is_a","term_name":"detection of low humidity","termid":"GO:0098517"},{"relation_name":"part_of","term_name":"sensory perception of low humidity","termid":"GO:0098511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity stimulus involved in sensory perception","termid":"GO:0098515"}


id: PBO:0114215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding subunit Msi2","termid":"PBO:0114215"}


id: PBO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP","termid":"PBO:0001655"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["OMIM:620228","UMLS:C5774303","MEDGEN:1824076"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: MONDO:0200000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare adenosarcoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C102570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenosarcoma","termid":"MONDO:0002876"},{"relation_name":"is_a","term_name":"uterine ligament cancer","termid":"MONDO:0003612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament adenosarcoma","synonyms":[{"name":"adenosarcoma of uterine ligament","type":"exact"},{"name":"uterine ligament adenosarcoma","type":"exact"}],"termid":"MONDO:0200000","xrefs":{"Monarch":{"xref_id":"0200000"}}}


id: PBO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: PBO:0089454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1","termid":"PBO:0089454"}


id: MONDO:1010487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, chicken","secondary_identifiers":["OMIA:001041-9031"],"termid":"MONDO:1010487","xrefs":{"Monarch":{"xref_id":"1010487"}}}


id: GO:1904155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN2 thymocyte. A DN2 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25-.","definition_xrefs":["PMID:25398325","GO_REF:0000086","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN2 thymocyte differentiation","termid":"GO:1904155"}


id: GO:0071963
data:
  {"annotated_genes":["SJAG_04522","SJAG_00236","SJAG_04461","SJAG_01799","SJAG_02022","SJAG_00845","SJAG_00661","SJAG_03637","SJAG_04666","SJAG_00596","SJAG_00333","SJAG_04509","SJAG_02536","SJAG_00610","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107627,116610],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[93711,100175,105370],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[103703],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[91106,94554,118816,104538,95635,113068],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[102849,87854,92394],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a polarized intracellular organization or cell growth patterns that regulate the shape of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02536":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071963","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["EC:5.1.3.10","RHEA:21656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["KEGG_REACTION:R04266","MetaCyc:RXN-9160"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: PBO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC13 antisense RNA","termid":"PBO:0050514"}


id: GO:0097464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large complex spine protruding from a dendrite. Each excrescence is formed by a cluster of spine heads.","definition_xrefs":["NIF_Subcellular:nlx_467","PMID:730852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thorny excrescence","termid":"GO:0097464"}


id: PBO:0091998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, quiescence specific","termid":"PBO:0091998"}


id: PBO:0024471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific","termid":"PBO:0024471"}


id: PBO:0067215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 282, pseudogene","termid":"PBO:0067215"}


id: PBO:0057336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 522","termid":"PBO:0057336"}


id: GO:0070913
data:
  {"annotated_genes":["SJAG_01480","SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88312,90827],"is_not":false,"summary":null,"term":"GO:0070913"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Wdr21 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01480":null,"SJAG_03454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Ddb1-Wdr21 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070913","terms_by_termid":{"GO:0070913":null}}


id: GO:1902928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inulin.","definition_xrefs":["PMID:23104410","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan biosynthetic process","termid":"GO:0010146"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin biosynthetic process","synonyms":[{"name":"inulin anabolism","type":"exact"},{"name":"inulin biosynthesis","type":"exact"},{"name":"inulin formation","type":"exact"},{"name":"inulin synthesis","type":"exact"}],"termid":"GO:1902928"}


id: PBO:0002952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein Dss1","termid":"PBO:0002952"}


id: PBO:0090516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase Ilv3","termid":"PBO:0090516"}


id: PBO:0076969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 pseudogene 1","termid":"PBO:0076969"}


id: GO:0033003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation","termid":"GO:0033003"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: MONDO:0100145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection where individuals test positive for SARS-CoV-2 but have no symptoms when they first test positive, but develop symptoms later on.","gene_count":0,"genotype_count":0,"name":"obsolete presymptomatic COVID-19 infection (obsolete MONDO:0100145)","termid":"MONDO:0100145","xrefs":{"Monarch":{"xref_id":"0100145"}}}


id: MONDO:0006274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraepithelial lesion of the vulvar squamous epithelium that represents the clinical and morphological manifestation of a productive HPV infection. Low grade refers to the associated low risk of concurrent or future cancer. (WHO, 2014)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar intraepithelial neoplasia","termid":"MONDO:0005198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade vulvar intraepithelial neoplasia","secondary_identifiers":["UMLS:C0495106","NCIT:C4760","MEDGEN:99217","EFO:1000330"],"synonyms":[{"name":"VIN 1","type":"exact"},{"name":"VIN 1 of usual type","type":"exact"},{"name":"VIN grade 1","type":"exact"},{"name":"grade 1 VIN","type":"exact"},{"name":"grade 1 vulvar intraepithelial neoplasia","type":"exact"},{"name":"grade I VIN","type":"exact"},{"name":"grade I vulvar intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of the vulva grade 1","type":"exact"},{"name":"intraepithelial neoplasia of vulva grade 1","type":"exact"},{"name":"low grade VIN","type":"exact"},{"name":"vulva intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar Low grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar Low-grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar flat condyloma","type":"exact"},{"name":"vulvar intraepithelial neoplasia 1 of usual type","type":"exact"},{"name":"vulvar intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar mild squamous dysplasia","type":"exact"}],"termid":"MONDO:0006274","xrefs":{"Monarch":{"xref_id":"0006274"}}}


id: GO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:jl","PMID:14744432","Wikipedia:Caspase","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity involved in apoptotic process","synonyms":[{"name":"caspase inhibitor activity","type":"broad"}],"termid":"GO:0043027"}


id: PBO:0049686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine ammonia-lyase","termid":"PBO:0049686"}


id: GO:2000181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"negatively_regulates","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}


id: GO:0140224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["GOC:lnp","PMID:22973053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SLAC complex","termid":"GO:0140224"}


id: GO:0034731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D3, E, F, and G, and Lsm10 and Lsm11, with the SMN complex. This complex forms Sm cores on U7 snRNA.","definition_xrefs":["PMID:12975319","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Lsm-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034731"}


id: PBO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of glucose-induced cAMP signaling; directly activates the GTPase activity of the heterotrimeric G protein alpha subunit Gpa2p","termid":"PBO:0085006"}


id: GO:1902275
data:
  {"annotated_genes":["SJAG_02592","SJAG_03624","SJAG_03664","SJAG_02381","SJAG_00142","SJAG_02723","SJAG_01511","SJAG_01867","SJAG_02342","SJAG_04369","SJAG_01599","SJAG_02622","SJAG_03255","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106666,77209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[98962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[94343,110360,91151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[98564,90776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[100300,97174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[117784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[97175,118147,100301,91831,117785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18314879","GOC:vw","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903308","GO:0001672"],"synonyms":[{"name":"regulation of chromatin assembly or disassembly","type":"related"},{"name":"regulation of chromatin assembly/disassembly","type":"related"},{"name":"regulation of chromatin modification","type":"related"},{"name":"regulation of chromatin organisation","type":"exact"},{"name":"regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1902275","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:1902801":null}}


id: FYPO:0001376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular calcium level during cellular response to salt stress","synonyms":[{"name":"normal cellular calcium accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"normal cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001376"}


id: GO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T-helper 17 cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000899","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell extravasation","termid":"GO:0035684"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell extravasation","termid":"GO:0035699"}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: GO:0062022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent protein localization to chromatin by which a cohesin ring complex is topologically linked to ssDNA (lagging strand) which is already linked to a dsDNA (leading strand) molecule as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0062022)","synonyms":[{"name":"second-DNA capture","type":"exact"}],"termid":"GO:0062022"}


id: PBO:0051813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-triphosphate receptor associated 2","termid":"PBO:0051813"}


id: PBO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin For3","termid":"PBO:0005361"}


id: PBO:0086564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR141C is not an essential gene","termid":"PBO:0086564"}


id: GO:0052226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism resulting in the formation of substances, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis of substance in other organism involved in symbiotic interaction (obsolete GO:0052226)","synonyms":[{"name":"biosynthesis of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052226"}


id: GO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to an oxidative stress stimulus.","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to oxidative stress (obsolete GO:0036473)","termid":"GO:0036473"}


id: PBO:0086798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR219C is not an essential gene","termid":"PBO:0086798"}


id: PBO:0056569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalin 1","termid":"PBO:0056569"}


id: PBO:0081971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 3","termid":"PBO:0081971"}


id: MONDO:0859156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis multiplex, Ain-Naz type","secondary_identifiers":["MEDGEN:1780944","OMIM:619345","UMLS:C5444223"],"termid":"MONDO:0859156","xrefs":{"Monarch":{"xref_id":"0859156"}}}


id: MONDO:0014714
data:
  {"annotated_genes":["SJAG_00279","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85969,85970],"is_not":false,"summary":null,"term":"MONDO:0014714"}]},"cv_name":"mondo","definition":"Progressive microcephaly-seizures-cortical blindness-developmental delay syndrome is a rare, genetic, neuro-ophthalmological syndrome characterized by post-natal, progressive microcephaly and early-onset seizures, associated with delayed global development, bilateral cortical visual impairment and moderate to severe intellectual disability. Additional manifestations include short stature, generalized hypotonia and pulmonary complications, such as recurrent respiratory infections and bronchiectasis. Auditory and metabolic screenings are normal.","definition_xrefs":["Orphanet:477814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01943":null},"genotype_count":0,"is_obsolete":false,"name":"progressive microcephaly-seizures-cortical blindness-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616632","UMLS:C5567650","GARD:17858","MEDGEN:1799073"],"synonyms":[{"name":"SCBMS","type":"exact"},{"name":"seizures, cortical blindness, and microcephaly syndrome","type":"related"},{"name":"seizures, cortical blindness, microcephaly syndrome","type":"exact"}],"termid":"MONDO:0014714","terms_by_termid":{"MONDO:0014714":null},"xrefs":{"Monarch":{"xref_id":"0014714"}}}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:mr","GOC:cjm","GOC:dph","GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: GO:1900022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of D-erythro-sphingosine kinase activity (obsolete GO:1900022)","synonyms":[{"name":"regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900022"}


id: PBO:0084218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends","termid":"PBO:0084218"}


id: PBO:0082536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082536"}


id: PBO:0003455
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.25","termid":"PBO:0003455"}


id: GO:0033917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pectic acid from the non-reducing end, releasing digalacturonate.","definition_xrefs":["EC:3.2.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"exo-poly-alpha-galacturonosidase activity","secondary_identifiers":["RHEA:56232","MetaCyc:3.2.1.82-RXN"],"synonyms":[{"name":"exopolygalacturanosidase activity","type":"related"},{"name":"exopolygalacturonosidase activity","type":"related"}],"termid":"GO:0033917"}


id: MONDO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphyllobothriasis (obsolete MONDO:0005732)","termid":"MONDO:0005732","xrefs":{"Monarch":{"xref_id":"0005732"}}}


id: MONDO:0004754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protrusion of the rectum through the anus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal prolapse","secondary_identifiers":["NCIT:C34973","ICD10CM:K62.3","ICD9:569.1","HP:0002035","UMLS:C0034888","MEDGEN:11151","DOID:9307","icd11.foundation:231914102","MESH:D012005"],"synonyms":[{"name":"procidentia, rectum","type":"exact"},{"name":"rectal prolapse","type":"exact"},{"name":"rectal prolapse (disease)","type":"exact"}],"termid":"MONDO:0004754","xrefs":{"Monarch":{"xref_id":"0004754"}}}


id: GO:0019139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-dimethylallyladenine + acceptor + H2O = adenine + 3-methylbut-2-enal + reduced electron acceptor.","definition_xrefs":["EC:1.5.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cytokinin dehydrogenase activity","secondary_identifiers":["MetaCyc:1.5.99.12-RXN","RHEA:13625","GO:0046420"],"synonyms":[{"name":"6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"related"},{"name":"N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"related"},{"name":"N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"related"},{"name":"cytokinin oxidase activity","type":"related"}],"termid":"GO:0019139"}


id: GO:1900384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"}


id: GO:1902122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chenodeoxycholic acid.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:10334992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"bile acid binding","termid":"GO:0032052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"chenodeoxycholic acid binding","synonyms":[{"name":"CDCA binding","type":"exact"}],"termid":"GO:1902122"}


id: PBO:0004521
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.21","termid":"PBO:0004521"}


id: PBO:0087707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for basal and activated transcription; direct target of Cyc8p-Tup1p transcriptional corepressor","termid":"PBO:0087707"}


id: PBO:0078446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P1","termid":"PBO:0078446"}


id: MONDO:0023567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kozlowski Brown Hardwick syndrome","secondary_identifiers":["MESH:C537506","UMLS:C2931511","MEDGEN:419822"],"synonyms":[{"name":"unusual facies, hooked clavicles, 13 pairs of ribs, widened metaphyses, square shaped vertebral bodies and communicating hydrocephalus","type":"related"}],"termid":"MONDO:0023567","xrefs":{"Monarch":{"xref_id":"0023567"}}}


id: PBO:0116680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 11","termid":"PBO:0116680"}


id: PBO:0056661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28","termid":"PBO:0056661"}


id: PBO:0084585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR058C was originally annotated as an independent ORF, but as a result of sequence changes, it was merged with two other ORFs into a single reading frame, designated YCR057C","termid":"PBO:0084585"}


id: MONDO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation due to abnormal neuronal migration (obsolete MONDO:0015572)","secondary_identifiers":["Orphanet:163209"],"synonyms":[{"name":"brain malformation due to abnormal neuronal migration","type":"exact"},{"name":"non-syndromic cerebral malformation due to abnormal neuronal migration","type":"related"}],"termid":"MONDO:0015572","xrefs":{"Monarch":{"xref_id":"0015572"}}}


id: PBO:0068838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 76, pseudogene","termid":"PBO:0068838"}


id: GO:1900179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of aflatoxin biosynthetic process","synonyms":[{"name":"activation of aflatoxin anabolism","type":"narrow"},{"name":"activation of aflatoxin biosynthesis","type":"narrow"},{"name":"activation of aflatoxin biosynthetic process","type":"narrow"},{"name":"activation of aflatoxin formation","type":"narrow"},{"name":"activation of aflatoxin synthesis","type":"narrow"},{"name":"positive regulation of aflatoxin anabolism","type":"exact"},{"name":"positive regulation of aflatoxin biosynthesis","type":"exact"},{"name":"positive regulation of aflatoxin formation","type":"exact"},{"name":"positive regulation of aflatoxin synthesis","type":"exact"},{"name":"up regulation of aflatoxin anabolism","type":"exact"},{"name":"up regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up regulation of aflatoxin formation","type":"exact"},{"name":"up regulation of aflatoxin synthesis","type":"exact"},{"name":"up-regulation of aflatoxin anabolism","type":"exact"},{"name":"up-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up-regulation of aflatoxin formation","type":"exact"},{"name":"up-regulation of aflatoxin synthesis","type":"exact"},{"name":"upregulation of aflatoxin anabolism","type":"exact"},{"name":"upregulation of aflatoxin biosynthesis","type":"exact"},{"name":"upregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"upregulation of aflatoxin formation","type":"exact"},{"name":"upregulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900179"}


id: GO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amine stimulus","termid":"GO:0071418"}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["DOID:9297","MEDGEN:44166","UMLS:C0023760","SCTID:90678009","NCIT:C26818","MESH:D008047","ICD9:528.5"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: PBO:0081159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM2 antisense RNA 1","termid":"PBO:0081159"}


id: PBO:0065922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 2A","termid":"PBO:0065922"}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119234],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: PR:O59669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger HIT domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03105","PANTHER:PTHR13093:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex subunit vps71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.05","secondary_identifiers":["UniProtKB:O59669"],"synonyms":[{"name":"Spom972h-ZNHIT1","type":"exact"}],"termid":"PR:O59669"}


id: MONDO:0009621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cervical spine fusion anomalies syndrome is characterized by microcephaly, facial dysmorphism (beaked nose, low-set ears, downslanting palpebral fissures, micrognathia), mild intellectual deficit, short stature, and cervical spine fusion anomalies producing spinal cord compression. It has been described in two brothers born to consanguineous parents. Transmission is likely to be autosomal recessive.","definition_xrefs":["Orphanet:2522"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cervical spine fusion anomalies syndrome","secondary_identifiers":["OMIM:251250","UMLS:C0796066","SCTID:715462003","MEDGEN:208663","GARD:3610","MESH:C537325"],"synonyms":[{"name":"microcephaly cervical spine fusion anomalies","type":"related"},{"name":"microcephaly with cervical spine fusion anomalies","type":"related"},{"name":"microcephaly, mild intellectual disability, short stature, and skeletal anomalies","type":"related"},{"name":"microcephaly, mild mental retardation, short stature, and skeletal anomalies","type":"related"}],"termid":"MONDO:0009621","xrefs":{"Monarch":{"xref_id":"0009621"}}}


id: PBO:0069072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 319, pseudogene","termid":"PBO:0069072"}


id: PBO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein (predicted)","termid":"PBO:0001395"}


id: PBO:0039053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 2","termid":"PBO:0039053"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: MONDO:0019173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabies is a viral zoonosis leading to a fatal encephalopathy if not treated.","definition_xrefs":["Orphanet:770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabies","secondary_identifiers":["SCTID:14168008","MedDRA:10037742","DOID:11260","ICD10CM:A82","MESH:D011818","ICD9:071","NCIT:C28182","UMLS:C0034494","MEDGEN:48308","GARD:7516","icd11.foundation:854762584","NORD:1644"],"synonyms":[{"name":"lyssa","type":"exact"}],"termid":"MONDO:0019173","xrefs":{"Monarch":{"xref_id":"0019173"}}}


id: GO:1901266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cephalosporin C.","definition_xrefs":["UniPathway:UPA00172","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cephalosporin metabolic process","termid":"GO:0043645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cephalosporin C metabolic process","synonyms":[{"name":"cephalosporin C metabolism","type":"exact"}],"termid":"GO:1901266"}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: PBO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Missegregation and Lethal when Overexpressed","termid":"PBO:0003517"}


id: FYPO:0000405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: normal","type":"related"},{"name":"normal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"normal mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000405"}


id: MONDO:0024255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255","xrefs":{"Monarch":{"xref_id":"0024255"}}}


id: FYPO:0007529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:22144463","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","termid":"FYPO:0003234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007529"}


id: PBO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease subunit Dis3","termid":"PBO:0018071"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: PBO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap155","termid":"PBO:0002474"}


id: MONDO:1012967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver disorder, non-human animal","termid":"MONDO:1012967","xrefs":{"Monarch":{"xref_id":"1012967"}}}


id: MONDO:0011379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete medullary cystic kidney disease 2 (obsolete MONDO:0011379)","termid":"MONDO:0011379","xrefs":{"Monarch":{"xref_id":"0011379"}}}


id: PBO:0053484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 459","termid":"PBO:0053484"}


id: PBO:0041488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 3","termid":"PBO:0041488"}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: MONDO:1012628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs due to a mutation in the RPGR gene and is characterized by normal photoreceptor morphogenesis, after which progressive rod–cone degeneration develops in the peripheral retina, gradually advancing toward the optic disc.","definition_xrefs":["PMID:32176262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy 1, RPGR-related, dog","secondary_identifiers":["OMIA:000831-9615"],"synonyms":[{"name":"XLPRA1","type":"exact"},{"name":"progressive retinal atrophy, X-linked, type 1, dog","type":"related"}],"termid":"MONDO:1012628","xrefs":{"Monarch":{"xref_id":"1012628"}}}


id: GO:1990913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane that is part of the head section of a sperm cell.","definition_xrefs":["PMID:24478030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"sperm head","termid":"GO:0061827"},{"relation_name":"part_of","term_name":"sperm plasma membrane","termid":"GO:0097524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"sperm head plasma membrane","termid":"GO:1990913"}


id: MONDO:0019957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PPoma is a type of pancreatic endocrine tumor that hypersecretes pancreatic polypeptide (PP) but that does not cause a hypersecretion syndrome (is non-functioning) and instead presents with only non-specific symptoms such as weight loss, abdominal pain, jaundice, diarrhea and/or an abdominal mass, hence leading to a late diagnosis. PPoma can be associated with multiple endocrine neoplasia 1 (MEN-1).","definition_xrefs":["Orphanet:97278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"PPoma","secondary_identifiers":["ICD9:239.89","NCIT:C67453","SCTID:255039001","MEDGEN:577392","GARD:19358","UMLS:C0346407","ICDO:8152/1","icd11.foundation:1180851464"],"synonyms":[{"name":"pancreatic polypeptide neoplasm","type":"exact"},{"name":"pancreatic polypeptide tumor","type":"exact"},{"name":"pancreatic polypeptide tumour","type":"exact"},{"name":"pancreatic polypeptidoma","type":"exact"}],"termid":"MONDO:0019957","xrefs":{"Monarch":{"xref_id":"0019957"}}}


id: GO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a pseudouridine synthetase by using base complementarity to guide site-specific pseudouridylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"snRNA pseudouridylation guide activity","termid":"GO:0030565"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:16244137"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of urease activity (obsolete GO:1905181)","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: MONDO:0020746
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87121,87122],"is_not":false,"summary":null,"term":"MONDO:0020746"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive multiple pterygium syndrome","termid":"MONDO:0009926"},{"relation_name":"is_a","term_name":"contractures, pterygia, and variable skeletal fusions syndrome","termid":"MONDO:0020937"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"contractures, pterygia, and variable skeletal fusions syndrome 1B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1676457","UMLS:C5193114","OMIM:618469","DOID:0081322"],"synonyms":[{"name":"contractures, pterygia, and spondylocarpotarsal fusion syndrome 1B","type":"exact"}],"termid":"MONDO:0020746","terms_by_termid":{"MONDO:0020746":null},"xrefs":{"Monarch":{"xref_id":"0020746"}}}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: -3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5-alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:18137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxy-5-alpha-steroid dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.278","KEGG_REACTION:R07138","MetaCyc:1.1.1.278-RXN"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: PBO:0059153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 7","termid":"PBO:0059153"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["SCTID:720573009","GARD:918","MESH:C536242","UMLS:C1862082","OMIM:113477","MEDGEN:350585"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: MONDO:0002408
data:
  {"annotated_genes":["SJAG_01344","SJAG_03785","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85268,85269,85267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"}]},"cv_name":"mondo","definition":"An inherited disorder affecting the metabolism of bilirubin. It results in increased levels of bilirubin in the blood. Representative examples of this condition include Gilbert syndrome and Crigler-Najjar syndrome.","definition_xrefs":["NCIT:C84761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"},{"relation_name":"is_a","term_name":"hyperbilirubinemia","termid":"MONDO:0024288"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary hyperbilirubinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2741","SCTID:14783006","UMLS:C0020435","MEDGEN:6963","MESH:D006933","OMIMPS:237450"],"synonyms":[{"name":"bilirubin metabolic disorder","type":"broad"},{"name":"hereditary hyperbilirubinemia","type":"exact"},{"name":"hyperbilirubinaemia","type":"broad"},{"name":"hyperbilirubinemia","type":"broad"}],"termid":"MONDO:0002408","terms_by_termid":{"MONDO:0009380":null},"xrefs":{"Monarch":{"xref_id":"0002408"}}}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: PBO:0042089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 158","termid":"PBO:0042089"}


id: FYPO:0004686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to streptothricin. Cells stop growing (and may die) at a concentration of streptothricin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to streptothricin","synonyms":[{"name":"hypersensitive to streptothricin","type":"exact"},{"name":"sensitive to streptothricin during mitotic cell cycle","type":"related"},{"name":"sensitive to streptothricin during vegetative growth","type":"exact"}],"termid":"FYPO:0004686"}


id: GO:0006377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete MATa1 (A1) pre-mRNA splicing (obsolete GO:0006377)","synonyms":[{"name":"MATa1 (A1) pre-mRNA splicing","type":"exact"}],"termid":"GO:0006377"}


id: PBO:0031845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_morphology_during_vegetative_growth","termid":"PBO:0031845"}


id: PBO:0043777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A3","termid":"PBO:0043777"}


id: GO:0019072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome packaging","secondary_identifiers":["Reactome:R-HSA-168303"],"termid":"GO:0019072"}


id: PBO:0051151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-5","termid":"PBO:0051151"}


id: PBO:0073107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 2","termid":"PBO:0073107"}


id: PBO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglutamate synthase","termid":"PBO:0060455"}


id: PBO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 18","termid":"PBO:0050201"}


id: MONDO:0023098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extrasystoles short stature hyperpigmentation microcephaly","secondary_identifiers":["UMLS:C4749763","MEDGEN:1660843"],"synonyms":[{"name":"Char douglas Dungan syndrome","type":"related"}],"termid":"MONDO:0023098","xrefs":{"Monarch":{"xref_id":"0023098"}}}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: MONDO:1012351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive neuronopathy, non-human animal","termid":"MONDO:1011871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive neuronopathy, dog","secondary_identifiers":["OMIA:001282-9615"],"termid":"MONDO:1012351","xrefs":{"Monarch":{"xref_id":"1012351"}}}


id: PBO:0064315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 4","termid":"PBO:0064315"}


id: GO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of inhibiting an immune effector process contributing to an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc receptor mediated inhibitory signaling pathway","synonyms":[{"name":"Fc receptor mediated inhibitory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002774"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: GO:1901562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paraquat","termid":"GO:1901562"}


id: PBO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 3","termid":"PBO:0000117"}


id: PBO:0080730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC2 antisense RNA 2","termid":"PBO:0080730"}


id: PR:P36611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php3 gene.","definition_xrefs":["UniProtKB:P36611","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.08","synonyms":[{"name":"Spom972h-php3","type":"exact"}],"termid":"PR:P36611"}


id: GO:0006554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"lysine catabolic process","secondary_identifiers":["Reactome:R-HSA-71064"],"synonyms":[{"name":"lysine breakdown","type":"exact"},{"name":"lysine catabolism","type":"exact"},{"name":"lysine degradation","type":"exact"}],"termid":"GO:0006554"}


id: MONDO:0019829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of superior vena cava","secondary_identifiers":["UMLS:C0265928","GARD:19275","MEDGEN:539589","ICD9:747.49","Orphanet:95498","SCTID:70195006"],"synonyms":[{"name":"congenital anomaly of superior caval vein","type":"exact"},{"name":"congenital anomaly of the SVC","type":"exact"}],"termid":"MONDO:0019829","xrefs":{"Monarch":{"xref_id":"0019829"}}}


id: GO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of renal sodium excretion","termid":"GO:0035813"}


id: FYPO:0006020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal.","definition_xrefs":["PMID:28366642","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006020"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc1","termid":"PBO:0017874"}


id: MONDO:0015648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Startle epilepsy is a rare neurologic disease characterized by frequent and spontaneous epileptic seizures (frequently with symmetrical or asymmetrical tonic features) triggered by a normal startle in response to a sudden and unexpected somatosensory (most frequently auditory) stimulus. Falls are common and can be traumatic. In most cases, the disease is associated with spastic hemi-, di-, or tetraplegia and intellectual disability.","definition_xrefs":["Orphanet:166427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"startle epilepsy","secondary_identifiers":["GARD:20081","UMLS:C4706527","SCTID:763632004","icd11.foundation:1012101161","MEDGEN:1633187"],"termid":"MONDO:0015648","xrefs":{"Monarch":{"xref_id":"0015648"}}}


id: GO:0000723
data:
  {"annotated_genes":["SJAG_01605","SJAG_02079","SJAG_03624","SJAG_00429","SJAG_02771","SJAG_05979","SJAG_05373","SJAG_03092","SJAG_01777","SJAG_00364","SJAG_01864","SJAG_03722","SJAG_04245","SJAG_04183","SJAG_01068","SJAG_01378","SJAG_01677","SJAG_01832","SJAG_00640","SJAG_05173","SJAG_02194","SJAG_06597","SJAG_04266","SJAG_02362","SJAG_03780","SJAG_04863","SJAG_06642","SJAG_00939","SJAG_04372","SJAG_01263","SJAG_03720","SJAG_04150","SJAG_03026","SJAG_01377","SJAG_02116","SJAG_03843","SJAG_01410","SJAG_03685","SJAG_05353","SJAG_04586","SJAG_03855","SJAG_02212","SJAG_05372","SJAG_05105","SJAG_02563","SJAG_00559"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58716,70158,70868,71386,71598,78313,78799,79249,89077,91400,99065,99193,100861,104160,105971,107771,108049,109395,109573,111546,112846,116282,116876],"is_not":false,"summary":null,"term":"GO:0000723"},{"annotations":[97173],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[89721,79747],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[76874],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[63196,76870,115971,99722,110387,91803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[112963,96157,80149,111749,112965,112966,112962,112964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[90602,108131,80147,113842,69536,70437,80215,115973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[73950,91805,79744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.","definition_xrefs":["GOC:elh","GOC:BHF_telomere","GOC:rl","PMID:11092831","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-157579"],"synonyms":[{"name":"regulation of telomere length","type":"related"}],"termid":"GO:0000723","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031848":null,"GO:0032210":null,"GO:0032215":null}}


