# terms

id: MONDO:1011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophagocytic syndrome, non-human animal","secondary_identifiers":["OMIA:001229"],"termid":"MONDO:1011697","xrefs":{"Monarch":{"xref_id":"1011697"}}}


id: PBO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_highly_transcribed_RNA_polymerase_II_genes_during_vegetative_growth","termid":"PBO:0036184"}


id: FYPO:0005009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005009)","synonyms":[{"name":"decreased protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005009"}


id: PBO:0042945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 1","termid":"PBO:0042945"}


id: PBO:0027747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_regulation_of_mitotic_cell_cycle_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027747"}


id: PR:G2TRJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1093.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.07","synonyms":[{"name":"Spom972h-SPAC1093.07","type":"exact"}],"termid":"PR:G2TRJ6"}


id: MONDO:0009683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2H (LGMD2H) is a mild subtype of autosomal recessive limb girdle muscular dystrophy characterized by slowly progressive proximal muscle weakness and wasting of the pelvic and shoulder girdles with onset that usually occurs during the second or third decade of life. Clinical presentation is variable and can include calf psuedohypertrophy, joint contractures, scapular winging, muscle cramping and/or facial and respiratory muscle involvement.","definition_xrefs":["Orphanet:1878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of TRIM32","termid":"MONDO:0016153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","secondary_identifiers":["MEDGEN:78750","GARD:3844","ICD9:359.89","DOID:0110282","SCTID:43226001","UMLS:C0270968","MESH:C535897","OMIM:254110"],"synonyms":[{"name":"LGMD2H","type":"exact"},{"name":"Sarcotubular myopathy","type":"exact"},{"name":"TRIM32 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TRIM32","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","type":"exact"},{"name":"limb-girdle muscular dystrophy due to TRIM32 deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2H","type":"related"},{"name":"muscular dystrophy Hutterite type","type":"exact"},{"name":"muscular dystrophy limb-girdle type 2H","type":"related"},{"name":"muscular dystrophy, Hutterite type","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 8","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2H","type":"related"},{"name":"sarcotubular myopathy","type":"exact"}],"termid":"MONDO:0009683","xrefs":{"Monarch":{"xref_id":"0009683"}}}


id: GO:1903177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000059","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903177)","synonyms":[{"name":"down regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"down regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"down regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"down regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"down regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"down-regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"down-regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"down-regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"down-regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"down-regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"downregulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"downregulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"downregulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"downregulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"downregulation of tyrosine hydroxylase activity","type":"exact"},{"name":"inhibition of L-tyrosine hydroxylase activity","type":"narrow"},{"name":"inhibition of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"narrow"},{"name":"inhibition of tyrosine 3-hydroxylase activity","type":"narrow"},{"name":"inhibition of tyrosine 3-monooxygenase activity","type":"narrow"},{"name":"inhibition of tyrosine hydroxylase activity","type":"narrow"},{"name":"negative regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"negative regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"negative regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"negative regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903177"}


id: GO:0021784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the postganglionic portion of the parasympathetic fiber over time, from its formation to the mature structure. The parasympathetic fiber is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system development","termid":"GO:0048483"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postganglionic parasympathetic fiber development","termid":"GO:0021784"}


id: FYPO:0006932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxyanisole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to butylated hydroxyanisole","synonyms":[{"name":"resistance to BHA","type":"exact"},{"name":"resistance to butylated hydroxyanisole during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxyanisole during vegetative growth","type":"exact"},{"name":"resistant to BHA","type":"exact"},{"name":"resistant to butylated hydroxyanisole","type":"exact"}],"termid":"FYPO:0006932"}


id: GO:0033245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of penicillin metabolic process","synonyms":[{"name":"negative regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033245"}


id: PBO:0046511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 5","termid":"PBO:0046511"}


id: PBO:0017779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly protein Emi5 (predicted)","termid":"PBO:0017779"}


id: FYPO:0005477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005477"}


id: PATO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001165 urine enzyme composition value (obsolete PATO:0001165)","termid":"PATO:0001165"}


id: MONDO:0008818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arterial tortuosity syndrome (ATS) is a rare connective tissue disorder characterized by tortuosity and elongation of the large and medium-sized arteries and a propensity towards aneurysm formation, vascular dissection, and stenosis of the pulmonary arteries.","definition_xrefs":["Orphanet:3342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"arterial tortuosity syndrome","secondary_identifiers":["MEDGEN:347942","icd11.foundation:371764699","MESH:C565942","DOID:0050645","GARD:774","NORD:803","OMIM:208050","SCTID:458432002","UMLS:C1859726","ICD10CM:Q87.82"],"synonyms":[{"name":"ATS","type":"related"},{"name":"arterial tortuosity","type":"related"},{"name":"arterial tortuosity syndrome","type":"exact"}],"termid":"MONDO:0008818","xrefs":{"Monarch":{"xref_id":"0008818"}}}


id: PBO:0063274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma cluster","termid":"PBO:0063274"}


id: PBO:0027145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane,_with_protein_mislocalized_to_cytoplasm,_during_vegetative_growth","termid":"PBO:0027145"}


id: GO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","secondary_identifiers":["GO:0052297"],"synonyms":[{"name":"modulation by organism of defense response in host by specific elicitors","type":"exact"},{"name":"modulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052158"}


id: PBO:0053140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6B","termid":"PBO:0053140"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: MONDO:0800485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome where the cause of the disease is a gain-of-function variant in the AKT3 gene.","definition_xrefs":["PMID:28969385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3-related overgrowth spectrum","termid":"MONDO:0800485","xrefs":{"Monarch":{"xref_id":"0800485"}}}


id: PBO:0053061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with SART3 regulation of splicing","termid":"PBO:0053061"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PBO:0047623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin like 2","termid":"PBO:0047623"}


id: MONDO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hemophilia A that manifests in some women with mutations in the F8 gene (Xq28), encoding coagulation factor VIII.","definition_xrefs":["Orphanet:177926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"symptomatic form of hemophilia A in female carriers","secondary_identifiers":["UMLS:C5680504","MEDGEN:1843218","GARD:17076"],"termid":"MONDO:0015787","xrefs":{"Monarch":{"xref_id":"0015787"}}}


id: PBO:0002815
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiomyopathy","termid":"PBO:0002815"}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: PBO:0044459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 45, pseudogene","termid":"PBO:0044459"}


id: GO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium maturation (obsolete GO:0075038)","synonyms":[{"name":"negative regulation of appressorium maturation on or near host","type":"related"},{"name":"negative regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075038"}


id: GO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + pyruvate = L-alanine + L-aspartate 4-semialdehyde.","definition_xrefs":["RHEA:12380","EC:2.6.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"diaminobutyrate-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.46-RXN","KEGG_REACTION:R02293"],"synonyms":[{"name":"L-2,4-diaminobutanoate:pyruvate aminotransferase activity","type":"related"},{"name":"L-diaminobutyric acid transaminase activity","type":"related"},{"name":"diaminobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"diaminobutyrate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047307"}


id: PBO:0028904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028904"}


id: MONDO:0005356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden coronary artery smooth muscle contraction leading to lumen constriction and decreased blood flow.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary vasospasm","secondary_identifiers":["UMLS:C0010073","EFO:0004225","SCTID:23687008","DOID:11840","ICD9:413.9","MESH:D003329","MEDGEN:3626"],"synonyms":[{"name":"coronary artery spasm","type":"exact"},{"name":"coronary artery vasospasm","type":"related"},{"name":"coronary vasospasm","type":"exact"}],"termid":"MONDO:0005356","xrefs":{"Monarch":{"xref_id":"0005356"}}}


id: PBO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 15","termid":"PBO:0071683"}


id: PBO:0071084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 86","termid":"PBO:0071084"}


id: PBO:0072765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A16","termid":"PBO:0072765"}


id: PBO:0041805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 16","termid":"PBO:0041805"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: GO:1902762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["PMID:16575901","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"}


id: GO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine tetraphosphate catabolic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') catabolism","type":"exact"},{"name":"guanosine tetraphosphate breakdown","type":"exact"},{"name":"guanosine tetraphosphate catabolism","type":"exact"},{"name":"guanosine tetraphosphate degradation","type":"exact"}],"termid":"GO:0015971"}


id: PBO:0067819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 121","termid":"PBO:0067819"}


id: PBO:0051516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 alpha","termid":"PBO:0051516"}


id: PBO:0053145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 1","termid":"PBO:0053145"}


id: MONDO:0012728
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85019,85020],"is_not":false,"summary":null,"term":"MONDO:0012728"}]},"cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the GPD1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:382031","MESH:C567087","GARD:15526","OMIM:611777","DOID:0110219","UMLS:C2673193"],"synonyms":[{"name":"BRGDA2","type":"exact"},{"name":"Brugada syndrome 2","type":"exact"},{"name":"Brugada syndrome caused by mutation in GPD1L","type":"exact"},{"name":"Brugada syndrome type 2","type":"exact"},{"name":"GPD1L Brugada syndrome","type":"exact"}],"termid":"MONDO:0012728","terms_by_termid":{"MONDO:0012728":null},"xrefs":{"Monarch":{"xref_id":"0012728"}}}


id: PBO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase delta subunit (predicted)","termid":"PBO:0004327"}


id: GO:0048645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ formation","synonyms":[{"name":"animal organ primordium initiation","type":"narrow"},{"name":"initiation of an animal organ primordium","type":"narrow"}],"termid":"GO:0048645"}


id: MONDO:0017049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypomyelination neuropathy-arthrogryposis syndrome is a rare, genetic, limb malformation syndrome characterized by multiple congenital distal joint contractures (incl. talipes equinovarus and both proximal and distal interphalangeal joint contractures of the hands) and very severe motor paralysis at birth (i.e. lack of swallowing, autonomous respiratory function and deep tendon reflexes), leading to death within first 3 months of life. Fetal hypo- or akinesia, late-onset polyhydramnios and dramatically reduced, or absent, motor nerve conduction velocities (<10 m/s) are frequently associated. Nerve ultrastructural morphology shows severe abnormalities of the nodes of Ranvier and myelinated axons.","definition_xrefs":["Orphanet:2680"],"gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination neuropathy-arthrogryposis syndrome (obsolete MONDO:0017049)","synonyms":[{"name":"Boylan-dew syndrome","type":"exact"}],"termid":"MONDO:0017049","xrefs":{"Monarch":{"xref_id":"0017049"}}}


id: GO:0120062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of gastric emptying","termid":"GO:0120060"},{"relation_name":"positively_regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric emptying","termid":"GO:0120062"}


id: MONDO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelium that lines the cavity of the uterine body. The vast majority of endometrial carcinomas are adenocarcinomas; squamous cell and adenosquamous carcinomas represent a minority of the cases. Endometrioid adenocarcinoma is the most frequently seen variant of endometrial adenocarcinoma. Uterine bleeding is an initial clinical sign. The prognosis depends on the stage of the tumor, the depth of myometrial wall invasion, and the degree of differentiation.","definition_xrefs":["NCIT:C7558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"endometrial cancer","termid":"MONDO:0011962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial carcinoma","secondary_identifiers":["SCTID:254878006","DOID:2871","HP:0012114","icd11.foundation:1123821211","ONCOTREE:UCEC","UMLS:C0476089","MEDGEN:96903","EFO:1001512"],"synonyms":[{"name":"carcinoma of endometrium","type":"exact"},{"name":"carcinoma of the endometrium","type":"exact"},{"name":"carcinoma, endometrial, malignant","type":"exact"},{"name":"endometrial cancer","type":"broad"},{"name":"endometrial carcinoma","type":"exact"},{"name":"endometrial carcinoma (disease)","type":"exact"},{"name":"endometrium carcinoma","type":"exact"}],"termid":"MONDO:0002447","xrefs":{"Monarch":{"xref_id":"0002447"}}}


id: MONDO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-neoplastic or neoplastic disorder that affects the structures of the mediastinum. Representative examples include mediastinitis, mediastinal lipoma, mediastinal schwannoma, thymoma, and mediastinal lymphoma.","definition_xrefs":["NCIT:C26826"],"gene_count":0,"genotype_count":0,"name":"obsolete mediastinal disorder (obsolete MONDO:0043707)","secondary_identifiers":["SCTID:49483002","MESH:D008477"],"synonyms":[{"name":"disease of mediastinum","type":"exact"},{"name":"disease or disorder of mediastinum","type":"exact"},{"name":"disease, mediastinal","type":"related"},{"name":"diseases, mediastinal","type":"related"},{"name":"disorder of mediastinum","type":"exact"},{"name":"mediastinal disease","type":"exact"},{"name":"mediastinal disorder","type":"exact"},{"name":"mediastinum disease","type":"exact"},{"name":"mediastinum disease or disorder","type":"exact"}],"termid":"MONDO:0043707","xrefs":{"Monarch":{"xref_id":"0043707"}}}


id: GO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["RESID:AA0326","PMID:11592901"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide (obsolete GO:0045459)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0045459"}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PBO:0042240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 3","termid":"PBO:0042240"}


id: FYPO:0000443
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[119280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[119261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[119282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[119278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[119300,119301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[119225,119233,119255,119232,119226,119249,119235,119236,119254,119252,119256,119253,119251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[119443,119445,119442,119274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[119272,119279,119283,119271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[119229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[119444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[119228],"is_not":false,"rel_names":["is_a","output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell in the vegetative growth phase of the life cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04280":null,"SJAG_04489":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_05207":null},"genotype_count":15,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q 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aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143","SJAG_01050","SJAG_05207","SJAG_03892","SJAG_02392"],"name":"abnormal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_03892","SJAG_04489","SJAG_03783","SJAG_05207","SJAG_01143","SJAG_01745","SJAG_01050","SJAG_04280"],"single_locus_genotype_uniquenames":["did4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","cmp7delta","pom1delta","vps24delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","nur1delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta"],"synonyms":[{"name":"abnormal cellular protein localisation during vegetative growth","type":"exact"},{"name":"abnormal cellular protein localization during vegetative growth","type":"exact"},{"name":"abnormal protein localisation during vegetative growth","type":"exact"},{"name":"abnormal protein localization during mitotic cell cycle","type":"related"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0000443","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0082394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase; forms a tetramer with Frs2p to generate active enzyme; able to hydrolyze mis-aminoacylated tRNA-Phe, which could contribute to translational quality control","termid":"PBO:0082394"}


id: PBO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1","termid":"PBO:0042959"}


id: SO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyl_2_selenouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyl_two_selenouridine","secondary_identifiers":["RNAMOD:074"],"synonyms":[{"name":"5-methylaminomethyl-2-selenouridine","type":"exact"},{"name":"five methylaminomethyl two selenouridine","type":"exact"},{"name":"mnm5se2U","type":"exact"}],"termid":"SO:0001366"}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65555],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:bf","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["Reactome:R-HSA-162906","GO:0022415","Wikipedia:Viral_life_cycle"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: CHEBI:192760
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of cyclohexanol.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mochimganine","termid":"CHEBI:192760"}


id: PBO:0069173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 426, pseudogene","termid":"PBO:0069173"}


id: GO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["GOC:dh","PMID:20308541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"bacillithiol metabolic process","synonyms":[{"name":"bacillithiol metabolism","type":"exact"}],"termid":"GO:0071792"}


id: PBO:0116696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA 2","termid":"PBO:0116696"}


id: PBO:0068518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 112, pseudogene","termid":"PBO:0068518"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: GO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction (attachment structure) found in epithelial cells that links intermediate filaments to extracellular matrices via transmembrane complexes. In vertebrates, hemidesmosomes mediate contact between the basal side of epithelial cells and the basal lamina. In C. elegans, hemidesmosomes connect epithelial cells to distinct extracellular matrices on both the apical and basal cell surfaces.","definition_xrefs":["PMID:20205195","ISBN:0815316208","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hemidesmosome","secondary_identifiers":["Wikipedia:Hemidesmosome"],"synonyms":[{"name":"epidermal attachment structure","type":"narrow"},{"name":"fibrous organelle","type":"narrow"},{"name":"hemi-adherens junction","type":"related"},{"name":"trans-epithelial attachment","type":"narrow"}],"termid":"GO:0030056"}


id: MONDO:0030438
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86186,86187],"is_not":false,"summary":null,"term":"MONDO:0030438"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5561987","DOID:0112333","MEDGEN:1794197","OMIM:619527"],"synonyms":[{"name":"PCH16","type":"exact"}],"termid":"MONDO:0030438","terms_by_termid":{"MONDO:0030438":null},"xrefs":{"Monarch":{"xref_id":"0030438"}}}


id: GO:0050788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining toxic mercury ions or atoms such that they are separated from sensitive components of a biological system.","definition_xrefs":["PMID:10774920"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of mercury (obsolete GO:0050788)","synonyms":[{"name":"mercuric ion (Hg2+) sequestering","type":"exact"},{"name":"mercuric ion (Hg2+) sequestration","type":"exact"},{"name":"mercury (Hg) ion sequestering","type":"exact"},{"name":"mercury (Hg) ion sequestration","type":"exact"},{"name":"mercury (Hg2+) ion retention","type":"exact"},{"name":"mercury (Hg2+) ion storage","type":"exact"},{"name":"retention of mercury (Hg2+) ion","type":"exact"},{"name":"sequestering of mercuric ion (Hg2+)","type":"exact"},{"name":"sequestering of mercury (Hg) ion","type":"exact"},{"name":"sequestration of mercuric ion (Hg2+)","type":"exact"},{"name":"sequestration of mercury (Hg) ion","type":"exact"},{"name":"storage of mercury (Hg2+) ion","type":"exact"}],"termid":"GO:0050788"}


id: GO:0140057
data:
  {"annotated_genes":["SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94292],"is_not":false,"summary":null,"term":"GO:0140057"}]},"cv_name":"biological_process","definition":"The attachment of a mitochondrial membrane to a vacuolar membrane via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0140056"],"is_obsolete":false,"name":"vacuole-mitochondria membrane tethering","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140057","terms_by_termid":{"GO:0140057":null}}


id: PBO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 24","termid":"PBO:0044340"}


id: PBO:0012559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sequence feature","termid":"PBO:0012559"}


id: PBO:0039610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like","termid":"PBO:0039610"}


id: PBO:0065594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 10","termid":"PBO:0065594"}


id: PBO:0049293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 12, pseudogene","termid":"PBO:0049293"}


id: PBO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin S","termid":"PBO:0061160"}


id: PBO:0014295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 involved in ubiquitin-dependent protein catabolism (predicted)","termid":"PBO:0014295"}


id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: PBO:0067970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 272","termid":"PBO:0067970"}


id: GO:1905466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-quadruplex DNA unwinding (obsolete GO:1905466)","synonyms":[{"name":"down regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"downregulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"inhibition of G-quadruplex DNA unwinding","type":"narrow"}],"termid":"GO:1905466"}


id: MONDO:0031002
data:
  {"annotated_genes":["SJAG_04002"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85540],"is_not":false,"summary":null,"term":"MONDO:0031002"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04002":null},"genotype_count":0,"is_obsolete":false,"name":"Baralle-Macken syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1778777","UMLS:C5543241","OMIM:619255"],"synonyms":[{"name":"BARMACS","type":"exact"},{"name":"neurodevelopmental disorder with cataracts and variable microcephaly","type":"exact"}],"termid":"MONDO:0031002","terms_by_termid":{"MONDO:0031002":null},"xrefs":{"Monarch":{"xref_id":"0031002"}}}


id: PBO:0091464
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChiTinaSe 2","termid":"PBO:0091464"}


id: GO:0009011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-glucosyl](n) + ADP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + ADP + H+.","definition_xrefs":["RHEA:18189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,4-glucan glucosyltransferase (NDP-glucose donor) activity","termid":"GO:0033840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity","secondary_identifiers":["MetaCyc:GLYCOGENSYN-RXN","EC:2.4.1.21"],"synonyms":[{"name":"ADP-glucose starch synthase activity","type":"related"},{"name":"ADP-glucose transglucosylase activity","type":"exact"},{"name":"ADP-glucose--starch glucosyltransferase activity","type":"related"},{"name":"ADP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"ADPG starch synthetase activity","type":"exact"},{"name":"ADPG-starch glucosyltransferase activity","type":"exact"},{"name":"ADPglucose-starch glucosyltransferase activity","type":"exact"},{"name":"ADPglucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"adenosine diphosphate glucose-starch glucosyltransferase activity","type":"exact"},{"name":"adenosine diphosphoglucose-starch glucosyltransferase activity","type":"exact"},{"name":"glycogen synthase activity","type":"related"},{"name":"starch (bacterial glycogen) synthase activity","type":"narrow"},{"name":"starch synthase activity","type":"exact"},{"name":"starch synthetase activity","type":"exact"}],"termid":"GO:0009011"}


id: GO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds within a sterol regulatory element binding protein (SREBP). SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["PMID:12923525","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein protease activity (obsolete GO:0017093)","synonyms":[{"name":"SREBP protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein protease activity","type":"exact"}],"termid":"GO:0017093"}


id: MONDO:0009962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the NPHP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome 1","secondary_identifiers":["SCTID:236531005","UMLS:C4551559","MEDGEN:1639722","ICD9:759.89","OMIM:266900"],"synonyms":[{"name":"Loken-Senior syndrome","type":"related"},{"name":"NPHP1 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 1","type":"related"},{"name":"SLSN1","type":"related"},{"name":"Senior-Loken syndrome","type":"related"},{"name":"Senior-Loken syndrome 1","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in NPHP1","type":"exact"},{"name":"Senior-Loken syndrome type 1","type":"exact"},{"name":"juvenile nephronophthisis with Leber amaurosis","type":"related"},{"name":"renal dysplasia and retinal aplasia","type":"related"},{"name":"renal-retinal syndrome","type":"related"},{"name":"senior-loken syndrome-1","type":"exact"}],"termid":"MONDO:0009962","xrefs":{"Monarch":{"xref_id":"0009962"}}}


id: GO:0030311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-N-acetyllactosamine, a carbohydrate composed of N-acetyllactosamine repeats (Gal-beta-1,4-GlcNAc-beta-1,3)n.","definition_xrefs":["PMID:9405606","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"poly-N-acetyllactosamine metabolic process","termid":"GO:0030309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-N-acetyllactosamine biosynthetic process","synonyms":[{"name":"poly-N-acetyllactosamine anabolism","type":"exact"},{"name":"poly-N-acetyllactosamine biosynthesis","type":"exact"},{"name":"poly-N-acetyllactosamine formation","type":"exact"},{"name":"poly-N-acetyllactosamine synthesis","type":"exact"}],"termid":"GO:0030311"}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: GO:1900313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltohexaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hexasaccharide transport","termid":"GO:1900298"},{"relation_name":"is_a","term_name":"regulation of maltohexaose transport","termid":"GO:1900312"},{"relation_name":"negatively_regulates","term_name":"maltohexaose transport","termid":"GO:2001103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltohexaose transport","synonyms":[{"name":"down regulation of maltohexaose transport","type":"exact"},{"name":"down-regulation of maltohexaose transport","type":"exact"},{"name":"downregulation of maltohexaose transport","type":"exact"},{"name":"inhibition of maltohexaose transport","type":"narrow"}],"termid":"GO:1900313"}


id: PBO:0030219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha,alpha-trehalase_activity","termid":"PBO:0030219"}


id: PR:P41887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock protein HSP 90-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.04c","secondary_identifiers":["UniProtKB:P41887"],"synonyms":[{"name":"Spom972h-HSP90AA1","type":"exact"}],"termid":"PR:P41887"}


id: PBO:0065725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 2","termid":"PBO:0065725"}


id: GO:0044380
data:
  {"annotated_genes":["SJAG_01224","SJAG_02514","SJAG_02228","SJAG_00279","SJAG_06270","SJAG_04703","SJAG_05220","SJAG_01546","SJAG_02731","SJAG_02831","SJAG_00229","SJAG_01371","SJAG_00883","SJAG_00918","SJAG_02529","SJAG_01790","SJAG_02695","SJAG_03915","SJAG_03437","SJAG_01211","SJAG_05319","SJAG_04455","SJAG_04901","SJAG_00082","SJAG_03508","SJAG_02045","SJAG_01775","SJAG_05266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105051,101275,74553,95612,107554,110184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[107247],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[107178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[96963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[91262,96856,113950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[70471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[92295,118670,110815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[89960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[90946,89097,114117,96759,107519,108902,109907,89702,100522,98623,116942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the cytoskeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00279":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02045":null,"SJAG_02228":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_02831":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04703":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cytoskeleton","type":"exact"}],"termid":"GO:0044380","terms_by_termid":{"GO:0035372":null,"GO:0044379":null,"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902543":null,"GO:1904498":null,"GO:1904518":null,"GO:1990976":null}}


id: PBO:0090230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS and PB1 domain protein, conserved in fungi and plants, implicated in signalling Mug70","termid":"PBO:0090230"}


id: MONDO:0850009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic microspherophakia","secondary_identifiers":["UMLS:C5681371","MEDGEN:1842434","GARD:22093","Orphanet:519294"],"termid":"MONDO:0850009","xrefs":{"Monarch":{"xref_id":"0850009"}}}


id: PBO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 3","termid":"PBO:0052624"}


id: GO:0006121
data:
  {"annotated_genes":["SJAG_00260","SJAG_02398","SJAG_01671","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88770,89139,113215,116781],"is_not":false,"summary":null,"term":"GO:0006121"}]},"cv_name":"biological_process","definition":"The transfer of electrons from succinate to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex II.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, succinate to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex II (succinate to ubiquinone)","type":"related"},{"name":"mitochondrial electron transport, succinate to coenzyme Q","type":"exact"},{"name":"oxidative phosphorylation, succinate to ubiquinone","type":"exact"}],"termid":"GO:0006121","terms_by_termid":{"GO:0006121":null}}


id: PBO:0082214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 3 subunit of the 20S proteasome; the only nonessential 20S subunit; may be replaced by the alpha 4 subunit (Pre6p) under stress conditions to create a more active proteasomal isoform","termid":"PBO:0082214"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: PBO:0074168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G5","termid":"PBO:0074168"}


id: GO:0009291
data:
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id: GO:0043632
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id: SOFP:cyto_range
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id: PBO:0062402
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id: FYPO:0004311
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id: GO:0048791
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id: FYPO:0008231
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id: PBO:0075040
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id: PBO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by glucose","termid":"PBO:0005011"}


id: PBO:0051342
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-23 (pseudogene)","termid":"PBO:0051342"}


id: PBO:0049271
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like 2","termid":"PBO:0049271"}


id: PBO:0034164
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id: GO:0042821
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id: MONDO:0003654
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id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: GO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ciliary neurotrophic factor (CNTF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ciliary neurotrophic factor-mediated signaling pathway","synonyms":[{"name":"CNTF-mediated signaling pathway","type":"exact"},{"name":"ciliary neurotrophic factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0070120"}


id: PBO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 2","termid":"PBO:0043909"}


id: MONDO:0030263
data:
  {"annotated_genes":["SJAG_03761"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86477],"is_not":false,"summary":null,"term":"MONDO:0030263"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070407","OMIM:619310","MEDGEN:1778269","UMLS:C5543334"],"synonyms":[{"name":"HLD21","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 21","type":"exact"}],"termid":"MONDO:0030263","terms_by_termid":{"MONDO:0030263":null},"xrefs":{"Monarch":{"xref_id":"0030263"}}}


id: GO:1901598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-pinoresinol.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-pinoresinol metabolic process","synonyms":[{"name":"(-)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1901598"}


id: GO:0045561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045561)","synonyms":[{"name":"regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045561"}


id: GO:1902305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["PMID:18591664","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transport","synonyms":[{"name":"regulation of sodium ion membrane transport","type":"exact"}],"termid":"GO:1902305"}


id: PBO:0038277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified","termid":"PBO:0038277"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: GO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in mesonephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in mesonephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0061238"}


id: MONDO:0014177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 22, autosomal dominant","secondary_identifiers":["MEDGEN:815794","UMLS:C3809464","OMIM:615420"],"synonyms":[{"name":"MYP22","type":"related"},{"name":"myopia 22, autosomal dominant","type":"exact"}],"termid":"MONDO:0014177","xrefs":{"Monarch":{"xref_id":"0014177"}}}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["VZ:846","GOC:bf","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: PBO:0004457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, DDB1 and CUL4-associated factor 7 (predicted)","termid":"PBO:0004457"}


id: PBO:0011482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Clr4","termid":"PBO:0011482"}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["DOID:4064","NCIT:C5029"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: GO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anesthetic stimulus. An anesthetic is a substance that causes loss of feeling, awareness, or sensation.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anesthetic","synonyms":[{"name":"response to anaesthetic","type":"exact"}],"termid":"GO:0072347"}


id: GO:0060489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lung bud bifurcates parallel to the plane of the previous bud.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of terminal units involved in lung branching","termid":"GO:0060448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"planar dichotomous subdivision of terminal units involved in lung branching morphogenesis","termid":"GO:0060489"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0051018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 receptor","termid":"PBO:0051018"}


id: MONDO:0006880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the buccal mucosa resembling early leukoplakia, characterized by the presence of filmy opalescence of the mucosa in the early stages to a whitish gray cast with a coarsely wrinkled surface in the later stages, associated with intracellular edema of the spinous or malpighian layer. (Dorland, 27th ed)","definition_xrefs":["MESH:D007967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral leukoedema","secondary_identifiers":["SCTID:67795000","DOID:4557","MedDRA:10057365","MEDGEN:44132","ICD9:528.79","UMLS:C0023523"],"synonyms":[{"name":"leukedema of mouth","type":"exact"}],"termid":"MONDO:0006880","xrefs":{"Monarch":{"xref_id":"0006880"}}}


id: GO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process to 2-oxoglutarate","synonyms":[{"name":"histidine breakdown to 2-oxoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-oxoglutarate","type":"broad"},{"name":"histidine catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"histidine catabolism to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-oxoglutarate","type":"exact"},{"name":"histidine degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019558"}


id: GO:1904556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan across a membrane.","definition_xrefs":["GOC:kmv","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan transport","termid":"GO:0015827"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}


id: MONDO:0020303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"},{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to paternal uniparental disomy of chromosome 15","secondary_identifiers":["MEDGEN:1826078","GARD:19578","Orphanet:98795","UMLS:C5680342"],"synonyms":[{"name":"Angelman syndrome due to paternal uniparental disomy of chromosome type 15","type":"exact"},{"name":"UPD(15)pat","type":"exact"}],"termid":"MONDO:0020303","xrefs":{"Monarch":{"xref_id":"0020303"}}}


id: PBO:0083021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but deleted due to sequence correction","termid":"PBO:0083021"}


id: FYPO:0008062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding to the chromatin central core by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:15908586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"increased chromatin binding at centromere central core","termid":"FYPO:0008062"}


id: PBO:0028818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028818"}


id: PBO:0029409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h+_cells","termid":"PBO:0029409"}


id: PBO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein Spa2","termid":"PBO:0017700"}


id: PBO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 6","termid":"PBO:0002688"}


id: GO:0015094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lead (Pb) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lead ion transmembrane transporter activity","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015094"}


id: PBO:0072975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 1","termid":"PBO:0072975"}


id: PBO:0116412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 7","termid":"PBO:0116412"}


id: PBO:0063381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 1 ligand 2","termid":"PBO:0063381"}


id: MONDO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance-induced psychosis","termid":"MONDO:0004630"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced mental disorder","secondary_identifiers":["UMLS:C0154330","ICD9:292.8","MEDGEN:1843491","DOID:1203","ICD9:292.89"],"termid":"MONDO:0001423","xrefs":{"Monarch":{"xref_id":"0001423"}}}


id: MONDO:0008903
data:
  {"annotated_genes":["SJAG_04114","SJAG_03453","SJAG_00229","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86767,86768,87299],"is_not":false,"summary":null,"term":"MONDO:0008903"},{"annotations":[86313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:363358000","DOID:1324","MEDGEN:66885","ICD9:162.3","ICD9:162.4","ICD9:162.5","OMIM:211980","UMLS:C0242379","ICD9:162.8","ICD9:162.9","NCIT:C7377"],"synonyms":[{"name":"Nonsmall cell lung cancer","type":"related"},{"name":"adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"adenocarcinoma of lung, somatic","type":"exact"},{"name":"alveolar cell carcinoma","type":"related"},{"name":"cancer of lung","type":"exact"},{"name":"lung cancer","type":"exact"},{"name":"lung cancer, protection against","type":"related"},{"name":"lung cancer, protection against, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, resistance to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, somatic","type":"exact"},{"name":"lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung neoplasm","type":"related"},{"name":"malignant lung neoplasm","type":"exact"},{"name":"malignant lung tumor","type":"exact"},{"name":"malignant lung tumour","type":"exact"},{"name":"malignant neoplasm of lung","type":"exact"},{"name":"malignant neoplasm of the lung","type":"exact"},{"name":"malignant tumor of lung","type":"exact"},{"name":"malignant tumor of the lung","type":"exact"},{"name":"malignant tumour of lung","type":"exact"},{"name":"malignant tumour of the lung","type":"exact"},{"name":"nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"nonsmall cell lung cancer, somatic","type":"exact"},{"name":"nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0008903","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0008903"}}}


id: GO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["PMID:28495958","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110074"}


id: GO:0016154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrimidine nucleoside + phosphate = pyrimidine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"pyrimidine-nucleoside phosphorylase activity","synonyms":[{"name":"Py-NPase activity","type":"related"},{"name":"pyrimidine-nucleoside:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0016154"}


id: GO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-leucine from one side of a membrane to the other. L-leucine is 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-leucine transmembrane transporter activity","synonyms":[{"name":"L-leucine transporter activity","type":"broad"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015190"}


id: PBO:0089468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0089468"}


id: GO:0106047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylpolyamine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine deacetylation","termid":"GO:0106047"}


id: GO:0008445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-aspartate + H2O + O2 = H2O2 + NH4+ + oxaloacetate.","definition_xrefs":["RHEA:12512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-aspartate oxidase activity","secondary_identifiers":["Reactome:R-HSA-6810076","EC:1.4.3.1"],"synonyms":[{"name":"D-aspartate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-aspartic oxidase activity","type":"related"},{"name":"aspartic oxidase activity","type":"related"}],"termid":"GO:0008445"}


id: GO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen. Antigen binding by an MHC protein complex allows the antigen to be displayed to a T cell or NK cell.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"antigen binding","synonyms":[{"name":"B cell receptor activity","type":"narrow"},{"name":"MHC activity","type":"narrow"},{"name":"antibody activity","type":"related"},{"name":"major histocompatibility complex activity","type":"narrow"},{"name":"major histocompatibility complex antigen display activity","type":"narrow"},{"name":"opsonin activity","type":"narrow"}],"termid":"GO:0003823"}


id: PBO:0027607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_anaphase","termid":"PBO:0027607"}


id: PBO:0040111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 2","termid":"PBO:0040111"}


id: PBO:0004602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Glp1 (predicted)","termid":"PBO:0004602"}


id: GO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"corticosterone 18-monooxygenase activity","secondary_identifiers":["RHEA:11872","MetaCyc:RXN66-360"],"synonyms":[{"name":"corticosterone 18-hydroxylase activity","type":"exact"},{"name":"corticosterone methyl oxidase activity","type":"related"},{"name":"corticosterone,reduced-adrenal-ferredoxin:oxygen oxidoreductase (18-hydroxylating)","type":"related"}],"termid":"GO:0047783"}


id: MONDO:0003710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian malignant germ cell tumor characterized by the presence of at least two different germ cell components. At least one of the germ cell components is primitive. The most common combination of germ cell elements is dysgerminoma and yolk sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mixed germ cell neoplasm","secondary_identifiers":["MEDGEN:83602","DOID:5936","NCIT:C8114","ONCOTREE:OMGCT","UMLS:C0280135"],"synonyms":[{"name":"mixed germ cell neoplasm of ovary","type":"exact"},{"name":"mixed germ cell neoplasm of the ovary","type":"exact"},{"name":"mixed germ cell tumor","type":"related"},{"name":"mixed germ cell tumor of ovary","type":"exact"},{"name":"mixed germ cell tumor of the ovary","type":"exact"},{"name":"mixed germ cell tumour","type":"related"},{"name":"mixed germ cell tumour of ovary","type":"exact"},{"name":"mixed germ cell tumour of the ovary","type":"exact"},{"name":"ovarian mixed germ cell neoplasm","type":"exact"},{"name":"ovarian mixed germ cell tumor","type":"exact"},{"name":"ovarian mixed germ cell tumour","type":"exact"},{"name":"ovary mixed germ cell tumor","type":"exact"},{"name":"ovary mixed germ cell tumour","type":"exact"}],"termid":"MONDO:0003710","xrefs":{"Monarch":{"xref_id":"0003710"}}}


id: PBO:0072031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 1","termid":"PBO:0072031"}


id: FYPO:0000663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased catalytic activity","synonyms":[{"name":"reduced catalytic activity","type":"exact"}],"termid":"FYPO:0000663"}


id: MONDO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cap myopathy is a very rare congenital myopathy presenting a weakness of facial and respiratory muscles associated with craniofacial and thoracic deformities, as well as weakness of limb proximal and distal muscles. Onset is at birth or in childhood, weakness progression is slow but may lead to a severe and even fatal prognosis.","definition_xrefs":["Orphanet:171881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"cap myopathy","secondary_identifiers":["MEDGEN:777197","SCTID:703532002","MESH:C579969","UMLS:C3710589","GARD:11915"],"synonyms":[{"name":"Cap disease","type":"exact"},{"name":"congenital myopathy with caps","type":"related"}],"termid":"MONDO:0015753","xrefs":{"Monarch":{"xref_id":"0015753"}}}


id: PBO:0030560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding","termid":"PBO:0030560"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: MONDO:1012501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, water buffalo","secondary_identifiers":["OMIA:002053-89462"],"termid":"MONDO:1012501","xrefs":{"Monarch":{"xref_id":"1012501"}}}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: MONDO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to vascular neoplasms with a prominent hemangiopericytic growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytic tumor","secondary_identifiers":["NCIT:C7076","MEDGEN:99196","DOID:3850","UMLS:C0476144"],"synonyms":[{"name":"hemangiopericytic neoplasm","type":"exact"}],"termid":"MONDO:0002789","xrefs":{"Monarch":{"xref_id":"0002789"}}}


id: PBO:0053434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 379","termid":"PBO:0053434"}


id: PBO:0066325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 intronic transcript 1","termid":"PBO:0066325"}


id: MONDO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated scaphocephaly is a form of nonsyndromic craniosynostosis characterized by premature fusion of the sagittal suture.","definition_xrefs":["Orphanet:35093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated scaphocephaly (obsolete MONDO:0018112)","secondary_identifiers":["NANDO:2201302"],"synonyms":[{"name":"isolated dolichocephaly","type":"exact"},{"name":"non-syndromic sagittal synostosis","type":"exact"}],"termid":"MONDO:0018112","xrefs":{"Monarch":{"xref_id":"0018112"}}}


id: GO:0071105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-11 stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-11","synonyms":[{"name":"response to IL-11","type":"exact"}],"termid":"GO:0071105"}


id: PBO:0058646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6775","termid":"PBO:0058646"}


id: PATO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000477 good value (obsolete PATO:0000477)","termid":"PATO:0000477"}


id: PBO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd1","termid":"PBO:0001578"}


id: PBO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 9","termid":"PBO:0050971"}


id: PBO:0014267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, possible transaminase, unknown specificity","termid":"PBO:0014267"}


id: MONDO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sex cord-stromal tumor that arises from the testis. It is the most frequent congenital testicular neoplasm and is usually diagnosed during the perinatal period. It usually presents as an asymptomatic scrotal or abdominal mass. Morphologically it is characterized by the presence of cysts that are lined by cells resembling granulosa and theca cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular granulosa cell tumor","termid":"MONDO:0003395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile type testicular granulosa cell tumor","secondary_identifiers":["DOID:6032","UMLS:C1515285","NCIT:C39947","MEDGEN:308257"],"synonyms":[{"name":"juvenile granulosa cell tumor","type":"broad"},{"name":"juvenile granulosa cell tumor (morphologic abnormality)","type":"broad"},{"name":"juvenile granulosa cell tumour","type":"broad"},{"name":"juvenile granulosa cell tumour (morphologic abnormality)","type":"broad"},{"name":"juvenile type granulosa cell neoplasm","type":"broad"},{"name":"juvenile type granulosa cell tumor","type":"broad"},{"name":"juvenile type granulosa cell tumour","type":"broad"}],"termid":"MONDO:0003741","xrefs":{"Monarch":{"xref_id":"0003741"}}}


id: GO:0032813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the tumor necrosis factor receptor superfamily.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tumor necrosis factor receptor superfamily binding","synonyms":[{"name":"TNF receptor superfamily binding","type":"exact"}],"termid":"GO:0032813"}


id: GO:0000810
data:
  {"annotated_genes":["SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110411],"is_not":false,"summary":null,"term":"GO:0000810"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycerol 3-phosphate + phosphate.","definition_xrefs":["RHEA:27449","PMID:9452443","GOC:kad","PMID:8567632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.75","MetaCyc:RXN-11277"],"synonyms":[{"name":"DGPP phosphatase activity","type":"exact"},{"name":"DGPP phosphohydrolase activity","type":"exact"},{"name":"diacylglycerol pyrophosphate phosphatase activity","type":"exact"}],"termid":"GO:0000810","terms_by_termid":{"GO:0000810":null}}


id: MONDO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Y (LGMD2Y) is a form of limb-girdle muscular dystrophy, presenting in the first or second decades of life, characterized by slowly progressive proximal and distal muscle weakness and atrophy. Additional manifestations include contractures of the proximal and distal interphalangeal hand joints, rigid spine, restricted pulmonary function, and mild cardiomyopathy.","definition_xrefs":["Orphanet:424261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Y","secondary_identifiers":["UMLS:C4511482","GARD:17708","MEDGEN:1385152","NCIT:C181000","OMIM:617072","SCTID:725907002","DOID:0110289"],"synonyms":[{"name":"LGMD2Y","type":"exact"},{"name":"TOR1AIP1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TOR1AIP1","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to LAP1B deficiency","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to Torsin-1A-interacting protein 1 deficiency","type":"exact"},{"name":"muscular dystrophy with progressive weakness, distal contractures and rigid spine","type":"exact"},{"name":"muscular dystrophy, autosomal recessive, with rigid spine and distal joint contractures","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Y","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2y","type":"exact"}],"termid":"MONDO:0014900","xrefs":{"Monarch":{"xref_id":"0014900"}}}


id: MONDO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Basidiobolus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"subcutaneous mycosis","termid":"MONDO:0000255"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"Zygomycosis","termid":"MONDO:0019136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basidiobolomycosis","secondary_identifiers":["MEDGEN:575966","SCTID:4921002","UMLS:C0343965","DOID:0050278","icd11.foundation:2087283296"],"synonyms":[{"name":"Basidiobolus caused disease or disorder","type":"exact"},{"name":"Basidiobolus disease or disorder","type":"exact"},{"name":"Basidiobolus infectious disease","type":"exact"},{"name":"basidiobolomycosis","type":"exact"},{"name":"infection by Basidiobolus","type":"exact"},{"name":"infection caused by Basidiobolus","type":"exact"}],"termid":"MONDO:0000302","xrefs":{"Monarch":{"xref_id":"0000302"}}}


id: MOD:00345
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["PubMed:12696888","RESID:AA0340","PubMed:3936839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(S-L-cysteinyl)-L-phenylalanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-L-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-L-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-phenylalanine","type":"exact"}],"termid":"MOD:00345"}


id: MONDO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 5q is a rare chromosomal anomaly syndrome, resulting from a partial duplication of the long arm of chromosome 5, characterized by short stature, moderate intellectual disability, and craniofacial dysmorphism (microcephaly, flat facies, large, low-set dysplastic ears, down-slanted, almond-shaped palpebral fissures, hypertelorism, epicanthal folds, small nose, long philtrum, small mouth with thin upper lip, and micrognathia). Patients also frequently present speech and cognitive delay, cardiac (ventriculomegaly, ventricular septum defect) and skeletal abnormalities (craniosynostosis, radial agenesis, ulnar hypoplasia, brachydactyly) and genital malformations (hypospadias, cryptorchidism).","definition_xrefs":["Orphanet:96097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 5","termid":"MONDO:0016956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 5q","secondary_identifiers":["MEDGEN:1646186","GARD:19313","SCTID:763274002","UMLS:C4706363"],"synonyms":[{"name":"distal duplication 5q","type":"exact"},{"name":"distal trisomy type 5q","type":"exact"},{"name":"telomeric duplication 5q","type":"exact"},{"name":"trisomy 5qter","type":"exact"}],"termid":"MONDO:0019880","xrefs":{"Monarch":{"xref_id":"0019880"}}}


id: PBO:0030008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level","termid":"PBO:0030008"}


id: PBO:0053035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE xylosyl- and glucuronyltransferase 1","termid":"PBO:0053035"}


id: GO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission in the presence of zinc. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"zinc potentiation of synaptic transmission, glycinergic","synonyms":[{"name":"zinc potentiation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060095"}


id: SO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/NcRNA","http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"INSDC_qualifier:other","type":"broad"},{"name":"known_ncrna","type":"exact"},{"name":"noncoding RNA","type":"exact"}],"termid":"SO:0000655"}


id: PBO:0109117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 16, RNA N6-adenosine","termid":"PBO:0109117"}


id: PATO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001176 deaf (obsolete PATO:0001176)","termid":"PATO:0001176"}


id: PBO:0027892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_associated_with_spindle","termid":"PBO:0027892"}


id: PBO:0073619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 5","termid":"PBO:0073619"}


id: MONDO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute serous otitis media caused by an allergen.","definition_xrefs":["PMID:15301306","DOID:11558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute serous otitis media","termid":"MONDO:0001312"},{"relation_name":"is_a","term_name":"allergic otitis media","termid":"MONDO:0021202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute allergic serous otitis media","secondary_identifiers":["MEDGEN:509956","ICD9:381.04","SCTID:59275002","UMLS:C0155418"],"termid":"MONDO:0001313","xrefs":{"Monarch":{"xref_id":"0001313"}}}


id: PBO:0067698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 6","termid":"PBO:0067698"}


id: MONDO:0002561
data:
  {"annotated_genes":["SJAG_02068","SJAG_05182","SJAG_04706","SJAG_04790","SJAG_02518","SJAG_02056","SJAG_05175","SJAG_02131","SJAG_03052","SJAG_04819","SJAG_02949","SJAG_02716","SJAG_04323","SJAG_01868","SJAG_00570","SJAG_00158","SJAG_01407","SJAG_04295","SJAG_03824","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[85140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"},{"annotations":[86397,86396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[85296,85297,85298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[84973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[86566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[85343,85342,85339,85341,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[85438,85437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"},{"annotations":[85193,85192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[85797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[86881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[86165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[85325,85326,85324,85327,85328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"},{"annotations":[85555,85556,85554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"A metabolic disorder caused by mutations in proteins critical for lysosomal function, including lysosomal enzymes, lysosomal integral membrane proteins, and proteins involved in the post-translational modification and trafficking of lysosomal proteins.","definition_xrefs":["PMID:21723623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_01868":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02131":null,"SJAG_02139":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_03824":null,"SJAG_04295":null,"SJAG_04323":null,"SJAG_04706":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"lysosomal storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:43098","GARD:18884","NCIT:C61250","NANDO:1200055","DOID:3211","NANDO:2100165","Orphanet:68366","MESH:D016464","icd11.foundation:656131403","SCTID:28821000119102","UMLS:C0085078","SCTID:23585005"],"synonyms":[{"name":"disorder of lysosomal enzyme","type":"exact"},{"name":"disorder of lysosomal enzymes","type":"exact"},{"name":"inborn lysosomal enzyme disorder","type":"exact"},{"name":"lysosomal disease","type":"exact"},{"name":"lysosomal disorder","type":"exact"},{"name":"lysosomal storage disorder","type":"exact"},{"name":"lysosomal storage metabolism disorder","type":"exact"},{"name":"lysosome disease","type":"exact"},{"name":"lysosome disorder","type":"exact"},{"name":"phospholipidosis","type":"related"}],"termid":"MONDO:0002561","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009290":null,"MONDO:0009737":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010027":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011449":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0012221":null,"MONDO:0012222":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0002561"}}}


id: PBO:0064371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral myelin protein 2","termid":"PBO:0064371"}


id: GO:0102359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 7,8-dihydroxycoumarin = UDP + 4-O- beta -D-glucosyl-daphnetin + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete daphnetin 4-O-beta-glucosyltransferase activity (obsolete GO:0102359)","termid":"GO:0102359"}


id: FYPO:0001675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"increased alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001675"}


id: GO:0008980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate = ADP + propanoyl phosphate.","definition_xrefs":["EC:2.7.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"propionate kinase activity","secondary_identifiers":["RHEA:23148"],"synonyms":[{"name":"ATP:propanoate phosphotransferase activity","type":"exact"},{"name":"PduW","type":"related"},{"name":"TdcD","type":"related"},{"name":"propanoate kinase activity","type":"exact"}],"termid":"GO:0008980"}


id: MONDO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","termid":"MONDO:0016779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal 14q32.2 microdeletion syndrome","secondary_identifiers":["Orphanet:254528","GARD:17221","UMLS:C5679640","MEDGEN:1842712"],"synonyms":[{"name":"maternal del(14)(q32.2)","type":"exact"},{"name":"maternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016781","xrefs":{"Monarch":{"xref_id":"0016781"}}}


id: GO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into an inhibitor of kappa B (I-kappaB) protein. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing bound NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.","definition_xrefs":["GOC:jl","PMID:21772278","PMID:7594468","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"I-kappaB phosphorylation","synonyms":[{"name":"IKB phosphorylation","type":"exact"},{"name":"IkappaB phosphorylation","type":"exact"},{"name":"inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:0007252"}


id: GO:0060471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of secretion by a cell that results in the release of intracellular molecules contained within a cortical granule by fusion of the vesicle with the plasma membrane of a cell. A cortical granule is a specialized secretory vesicle that is released during egg activation that changes the surface of the egg to prevent polyspermy.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"prevention of polyspermy","termid":"GO:0060468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cortical granule exocytosis","synonyms":[{"name":"cortical granule release","type":"related"},{"name":"cortical reaction","type":"related"}],"termid":"GO:0060471"}


id: MONDO:0859346
data:
  {"annotated_genes":["SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85575],"is_not":false,"summary":null,"term":"MONDO:0859346"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 7 with inflammation and tumor predisposition","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060982","MEDGEN:1824057","OMIM:620189","UMLS:C5774284"],"termid":"MONDO:0859346","terms_by_termid":{"MONDO:0859346":null},"xrefs":{"Monarch":{"xref_id":"0859346"}}}


id: GO:0046126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside biosynthetic process","termid":"GO:0046120"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside biosynthetic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046126"}


id: GO:1900037
data:
  {"annotated_genes":["SJAG_03345","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89217,116418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular response to hypoxic stress","type":"exact"},{"name":"regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900037","terms_by_termid":{"GO:1900039":null}}


id: PBO:0056176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 pseudogene 1","termid":"PBO:0056176"}


id: GO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate formation","termid":"GO:0021990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior neural plate formation","secondary_identifiers":["Reactome:R-HSA-9832991"],"termid":"GO:0090018"}


id: GO:0140204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyridoxal from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"pyridoxal transmembrane transport","termid":"GO:1903090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"pyridoxal import across plasma membrane","termid":"GO:0140204"}


id: MONDO:0017995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylocostal dysostosis-hypospadias-intellectual disability syndrome","secondary_identifiers":["MEDGEN:1665083","Orphanet:329252","UMLS:C4751002"],"termid":"MONDO:0017995","xrefs":{"Monarch":{"xref_id":"0017995"}}}


id: PBO:0057241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 432","termid":"PBO:0057241"}


id: PBO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 4","termid":"PBO:0071919"}


id: GO:0018727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phenanthrol + X-SO3(-) = HX + 2-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phenanthrol sulfotransferase activity (obsolete GO:0018727)","synonyms":[{"name":"2-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018727"}


id: MOD:01391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue, and C-5 methoxymethylates to form L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0468","PubMed:7844053","PubMed:10625477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-(methoxymethyl)thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01391"}


id: PBO:0041069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 2","termid":"PBO:0041069"}


id: PBO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like R","termid":"PBO:0061261"}


id: MONDO:0024886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenofibroma characterized by the presence of serous secretory cells and minute cystic spaces filled with watery fluid. A representative example is the ovarian serous adenofibroma. Cases with epithelial atypia described in the ovary lacking stromal invasion are designated as borderline serous adenofibromas and have a low grade malignant potential.","definition_xrefs":["NCIT:C67090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous adenofibroma","secondary_identifiers":["UMLS:C0334498","MEDGEN:87253","ICDO:9014/0"],"synonyms":[{"name":"serous adenofibroma","type":"exact"}],"termid":"MONDO:0024886","xrefs":{"Monarch":{"xref_id":"0024886"}}}


id: PBO:0086467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane protein of unknown function; although similar to paralogous Sdh3p, Shh3p is not a stoichiometric subunit of either succinate dehydrogenase or of the TIM22 translocase; SHH3 has a paralog, SDH3, that arose from the whole genome duplication","termid":"PBO:0086467"}


id: GO:0031281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclase activity","synonyms":[{"name":"activation of cyclase activity","type":"narrow"},{"name":"stimulation of cyclase activity","type":"narrow"},{"name":"up regulation of cyclase activity","type":"exact"},{"name":"up-regulation of cyclase activity","type":"exact"},{"name":"upregulation of cyclase activity","type":"exact"}],"termid":"GO:0031281"}


id: PBO:0056828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase 2 (putative)","termid":"PBO:0056828"}


id: PBO:0058976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 2","termid":"PBO:0058976"}


id: PBO:0113746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 2","termid":"PBO:0113746"}


id: PBO:0049676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha","termid":"PBO:0049676"}


id: PBO:0028629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028629"}


id: FYPO:0002922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B does not occur. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein ubiquitination during vegetative growth","termid":"FYPO:0000912"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"abolished histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"abolished histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"},{"name":"histone H2B-K119 ubiquitination abolished during vegetative growth","type":"exact"},{"name":"histone H2B-K119 ubiquitination absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002922"}


id: PR:Q9P3U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ELAV-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C328.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.05","secondary_identifiers":["UniProtKB:Q9P3U1"],"synonyms":[{"name":"Spom972h-ELAVL2","type":"exact"}],"termid":"PR:Q9P3U1"}


id: MONDO:0015915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar malformation (obsolete MONDO:0015915)","secondary_identifiers":["Orphanet:182061"],"termid":"MONDO:0015915","xrefs":{"Monarch":{"xref_id":"0015915"}}}


id: FYPO:0006791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of lipid droplets.","definition_xrefs":["PomBase:mah","PMID:30355493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"lipid droplets present in normal numbers","synonyms":[{"name":"lipid droplets present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"lipid droplets present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0006791"}


id: PBO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 4","termid":"PBO:0046211"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_01149","SJAG_03967","SJAG_01213","SJAG_03061","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79322,110924,95774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[109046,108890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["GOC:bhm","PMID:17079683","PMID:16721054","GOC:vw","PMID:10766736","PMID:19328067","PMID:7759473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: GO:0006599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphagen metabolic process","synonyms":[{"name":"phosphagen metabolism","type":"exact"}],"termid":"GO:0006599"}


id: PBO:0029281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029281"}


id: MONDO:0008536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature-sensitive lethal mutation","secondary_identifiers":["OMIM:187340","UMLS:C1861242","MEDGEN:396088"],"synonyms":[{"name":"temperature-sensitive lethal mutation","type":"exact"}],"termid":"MONDO:0008536","xrefs":{"Monarch":{"xref_id":"0008536"}}}


id: FYECO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine absent","termid":"FYECO:0000381"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: GO:0140501
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89477],"is_not":false,"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of reticulophagy","termid":"GO:0140500"},{"relation_name":"positively_regulates","term_name":"reticulophagy","termid":"GO:0061709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reticulophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ER autophagy","type":"exact"},{"name":"positive regulation of ER degradation","type":"related"},{"name":"positive regulation of ER-phagy","type":"exact"},{"name":"positive regulation of autophagy of the ER","type":"exact"},{"name":"positive regulation of autophagy of the endoplasmic reticulum","type":"exact"},{"name":"positive regulation of endoplasmic reticulum autophagy","type":"exact"},{"name":"positive regulation of endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0140501","terms_by_termid":{"GO:0140501":null}}


id: GO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclic ADP-ribose + H20 = ADP-ribose (ADPR).","definition_xrefs":["GOC:PARL","GOC:pad","PMID:11866528","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic ADP-ribose hydrolase (obsolete GO:0061812)","termid":"GO:0061812"}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: GO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.","definition_xrefs":["GOC:mb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"extracellular membrane-bounded organelle","termid":"GO:0065010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"symbiont-containing vacuole","synonyms":[{"name":"SCV","type":"exact"},{"name":"Salmonella-containing vacuole","type":"narrow"},{"name":"bacterium-containing vacuole","type":"narrow"},{"name":"parasitophorous vacuole","type":"exact"},{"name":"pathogen-occupied vacuole","type":"narrow"}],"termid":"GO:0020003"}


id: MONDO:0018360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited skin rash that appears in the neonatal period and usually resolves in four to six months after birth. It is caused by placental transfer of maternal autoantibodies, usually anti-Ro antibody. In a minority of cases, it is associated with congenital heart block, hepatitis, or thrombocytopenia. The mothers of the affected babies may be asymptomatic or suffer from systemic lupus erythematosus, Sjogren's syndrome, or rheumatoid arthritis.","definition_xrefs":["NCIT:C99236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal lupus erythematosus","secondary_identifiers":["MEDGEN:98372","EFO:0004537","SCTID:95609003","GARD:21647","icd11.foundation:213855225","MESH:C536397","UMLS:C0409979","Orphanet:398124","NORD:1495"],"synonyms":[{"name":"Neonatal Lupus","type":"exact"},{"name":"congenital lupus","type":"related"},{"name":"congenital lupus erythematosus","type":"related"},{"name":"neonatal SLE","type":"related"},{"name":"neonatal lupus","type":"related"},{"name":"neonatal lupus syndrome","type":"related"},{"name":"neonatal systemic lupus erythematosus","type":"related"}],"termid":"MONDO:0018360","xrefs":{"Monarch":{"xref_id":"0018360"}}}


id: PBO:0109143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion Ema19","termid":"PBO:0109143"}


id: PBO:0038956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 2","termid":"PBO:0038956"}


id: PBO:0063251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 2","termid":"PBO:0063251"}


id: MONDO:0100388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Monosomy 5. (A cytogenetic aneuploidy abnormality that refers to the presence of one chromosome 5 only. It is associated with the development of refractory anemia with excess blasts, refractory anemia with multilineage dysplasia, and refractory anemia with multilineage dysplasia and ringed sideroblasts.)","definition_xrefs":["NCIT:C36523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, Monosomy 5","synonyms":[{"name":"AML, Monosomy 5","type":"exact"}],"termid":"MONDO:0100388","xrefs":{"Monarch":{"xref_id":"0100388"}}}


id: MONDO:0017270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","secondary_identifiers":["Orphanet:281217"],"termid":"MONDO:0017270","xrefs":{"Monarch":{"xref_id":"0017270"}}}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: GO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:19153666","PMID:21380641","PMID:26655718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"premature acrosome loss","synonyms":[{"name":"spontaneous acrosome loss","type":"exact"}],"termid":"GO:0061948"}


id: PBO:0025464
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this protein is shorter than the S. cerevisiae ortholog and missing the enoyl-CoA hydratase domain. Other genes for fatty acid beta-oxidation are also absent","termid":"PBO:0025464"}


id: PBO:0117047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7","termid":"PBO:0117047"}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: GO:0033227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dsRNA, double-stranded ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dsRNA transport","termid":"GO:0033227"}


id: PR:Q9URX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pin2-interacting protein X1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23149:SF1","OMA:SCHPO02086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pxr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.05","secondary_identifiers":["UniProtKB:Q9URX9"],"synonyms":[{"name":"PinX1-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PINX1","type":"exact"}],"termid":"PR:Q9URX9"}


id: GO:0061703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an assemble of ASC dimers that is capable of inducing pyroptosis.","definition_xrefs":["PMID:17599095","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyroptosome complex","synonyms":[{"name":"ASC pyroptosome","type":"exact"}],"termid":"GO:0061703"}


id: PBO:0067596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 759, pseudogene","termid":"PBO:0067596"}


id: SO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"First codon to be translated by a ribosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Start_codon"],"synonyms":[{"name":"initiation codon","type":"exact"},{"name":"start codon","type":"exact"}],"termid":"SO:0000318"}


id: MONDO:0022919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of cytokine receptor activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cytokine receptor deficiency","synonyms":[{"name":"cytokine receptor activity disease","type":"exact"},{"name":"disorder of cytokine receptor activity","type":"exact"}],"termid":"MONDO:0022919","xrefs":{"Monarch":{"xref_id":"0022919"}}}


id: GO:0021988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory lobe development","termid":"GO:0021988"}


id: PBO:0074171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 2","termid":"PBO:0074171"}


id: MONDO:0019892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 7","termid":"MONDO:0016889"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 7p","secondary_identifiers":["GARD:19325","Orphanet:96126","MEDGEN:1683031","UMLS:C5190515"],"synonyms":[{"name":"distal deletion 7p","type":"exact"},{"name":"distal monosomy type 7p","type":"exact"},{"name":"monosomy 7pter","type":"exact"},{"name":"telomeric deletion 7p","type":"exact"}],"termid":"MONDO:0019892","xrefs":{"Monarch":{"xref_id":"0019892"}}}


id: FYPO:0001401
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[119278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[119300,119301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[119283,119271,119272,119279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_03596"],"name":"abnormal protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell division site","type":"exact"},{"name":"abnormal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0001401","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0003946":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0109632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C (pseudogene)","termid":"PBO:0109632"}


id: PBO:0030482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ferrichrome_absent_from_cell","termid":"PBO:0030482"}


id: GO:0075077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase activity (obsolete GO:0075077)","termid":"GO:0075077"}


id: FYPO:0003473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when the cell is subject to salt stress. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to salt stress","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003473"}


id: MONDO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade carcinoma characterized by the presence of comedo-type of tumor cell necrosis in which the necrotic areas are surrounded by a solid proliferation of malignant pleomorphic cells.","definition_xrefs":["NCIT:C4188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"comedocarcinoma","secondary_identifiers":["ICDO:8501/3","DOID:5670","MEDGEN:90773","UMLS:C0334370"],"synonyms":[{"name":"Comedocarcinoma","type":"exact"},{"name":"comedo carcinoma","type":"exact"}],"termid":"MONDO:0003575","xrefs":{"Monarch":{"xref_id":"0003575"}}}


id: SO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uniparental disomy is a sequence_alteration where a diploid individual receives two copies for all or part of a chromosome from one parent and no copies of the same chromosome or region from the other parent.","definition_xrefs":["SO:BM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPD","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Uniparental_disomy"],"synonyms":[{"name":"UPD","type":"exact"},{"name":"uniparental disomy","type":"exact"}],"termid":"SO:0001744"}


id: PR:O60118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L13, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04037","PANTHER:PTHR11545:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L13-like mitochondrial ribosomal protein Mrpl23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.04","secondary_identifiers":["UniProtKB:O60118"],"synonyms":[{"name":"54S ribosomal protein L23, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPBC16G5.04","type":"related"},{"name":"Spom972h-MRPL13","type":"exact"}],"termid":"PR:O60118"}


id: GO:0097626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"},{"relation_name":"is_a","term_name":"low-affinity basic amino acid transmembrane transporter activity","termid":"GO:0097625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low-affinity L-arginine transmembrane transporter activity","synonyms":[{"name":"low affinity L-arginine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097626"}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78974],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8953499","Reactome:R-HSA-176606","RHEA:10040","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: PBO:0084913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network regulator; forms GTPase-activating Bfa1p-Bub2p complex that binds Tem1p and spindle pole bodies, blocks cell cycle progression before anaphase in response to spindle and kinetochore damage","termid":"PBO:0084913"}


id: PBO:0036410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1 (predicted)","termid":"PBO:0036410"}


id: MONDO:0035551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic cerebral small vessel disease characterized by an adult-onset primary microangiopathy with severe atherosclerosis of arterioles and secondary leukoencephalopathy. Patients may present with migraine, transient ischemic attacks, stroke with central facial palsy, cognitive dysfunction with impaired concentration, dementia, depression, movement disorder, vertigo, dysphagia, dysarthria, sicca syndrome, impaired REM sleep, and therapy-resistant hypertension, among others. Brain MRI typically shows a leukoencephalopathy that is disproportionately severe and extensive compared to the clinical disease.","definition_xrefs":["Orphanet:575553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin a-related arteriopathy-strokes-leukoencephalopathy","secondary_identifiers":["ICD10CM:I67.8","MEDGEN:1804103","GARD:22320","UMLS:C5680354"],"synonyms":[{"name":"CARASAL","type":"exact"}],"termid":"MONDO:0035551","xrefs":{"Monarch":{"xref_id":"0035551"}}}


id: GO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (pseudohyphal growth) (obsolete GO:0000195)","synonyms":[{"name":"nuclear translocation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000195"}


id: PBO:0062309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily T member 1","termid":"PBO:0062309"}


id: GO:0032374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol transport","termid":"GO:0032374"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: MONDO:0008455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, segmental","secondary_identifiers":["MEDGEN:355801","UMLS:C1866774","MESH:C566670","OMIM:183020"],"synonyms":[{"name":"spinal muscular atrophy, segmental","type":"exact"}],"termid":"MONDO:0008455","xrefs":{"Monarch":{"xref_id":"0008455"}}}


id: GO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone secretion","synonyms":[{"name":"activation of hormone secretion","type":"narrow"},{"name":"stimulation of hormone secretion","type":"narrow"},{"name":"up regulation of hormone secretion","type":"exact"},{"name":"up-regulation of hormone secretion","type":"exact"},{"name":"upregulation of hormone secretion","type":"exact"}],"termid":"GO:0046887"}


id: PBO:0082314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrial inner membrane protein; interacts genetically with ATP6","termid":"PBO:0082314"}


id: FYPO:0005437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is normal (i.e. indistinguishable from wild type) during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah","PMID:17178839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal number of Rad52 foci during vegetative growth","termid":"FYPO:0007328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"normal number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"normal number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"normal number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"normal number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0005437"}


id: FYPO:0006906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G2 to M phase until the cell reaches a certain size.","definition_xrefs":["GO:0031569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000298","FYPO:0000631","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G2 cell size control checkpoint","synonyms":[{"name":"normal G2 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006906"}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: MONDO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milia, multiple eruptive","secondary_identifiers":["MESH:C562823","MEDGEN:83356","OMIM:157400","SCTID:238749001","UMLS:C0343079"],"synonyms":[{"name":"MEM","type":"related"},{"name":"milia, multiple eruptive","type":"exact"}],"termid":"MONDO:0008001","xrefs":{"Monarch":{"xref_id":"0008001"}}}


id: MONDO:0022932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An n-of-1 disease characterized by hearing loss, almost white hair, a psoriasiform rash with hyperkaratotic papillomata, muscle contractures, and depressed granulocyte and monocyte chemotaxis, dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and muscle contractures, and depressed granulocyte and monocyte chemotaxis. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:526579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Davenport-Donlan syndrome","secondary_identifiers":["Orphanet:3215","UMLS:C2931076","MEDGEN:443971","MESH:C535988"],"synonyms":[{"name":"Davenport Donlan syndrome","type":"related"},{"name":"dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and depressed chemotaxis","type":"related"}],"termid":"MONDO:0022932","xrefs":{"Monarch":{"xref_id":"0022932"}}}


id: PBO:0069437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 702, pseudogene","termid":"PBO:0069437"}


id: PR:Q9URY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein WDR12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19855:SF11","OMA:SCHPO02085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein ytm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.04c","secondary_identifiers":["UniProtKB:Q9URY0"],"synonyms":[{"name":"Spom972h-WDR12","type":"exact"}],"termid":"PR:Q9URY0"}


id: MONDO:0023006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"doxorubicin induced cardiomyopathy","secondary_identifiers":["GARD:6285"],"termid":"MONDO:0023006","xrefs":{"Monarch":{"xref_id":"0023006"}}}


id: SO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The last base to be translated into protein. It does not include the stop codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_end","synonyms":[{"name":"coding end","type":"exact"},{"name":"translation termination site","type":"exact"},{"name":"translation_end","type":"exact"}],"termid":"SO:0000327"}


id: PBO:0054033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1364","termid":"PBO:0054033"}


id: PBO:0080477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-3","termid":"PBO:0080477"}


id: PBO:0091400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1","termid":"PBO:0091400"}


id: MONDO:1012753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the MERTK gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, MERTK-related, dog","secondary_identifiers":["OMIA:001932-9615"],"termid":"MONDO:1012753","xrefs":{"Monarch":{"xref_id":"1012753"}}}


id: GO:1900431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to heat.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:1900431"}


id: PBO:0011955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_mutation","termid":"PBO:0011955"}


id: PBO:0076328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 1 pseudogene 2","termid":"PBO:0076328"}


id: PBO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 45 pseudogene","termid":"PBO:0062095"}


id: GO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + CDP-ethanolamine = L-serine-phosphoethanolamine + CMP + H+.","definition_xrefs":["RHEA:22656","EC:2.7.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"serine-phosphoethanolamine synthase activity","secondary_identifiers":["MetaCyc:SERINE-PHOSPHOETHANOLAMINE-SYNTHASE-RXN","KEGG_REACTION:R02563"],"synonyms":[{"name":"CDP-ethanolamine:L-serine ethanolamine phosphotransferase activity","type":"related"},{"name":"serine ethanolamine phosphate synthetase activity","type":"related"},{"name":"serine ethanolamine phosphodiester synthase activity","type":"related"},{"name":"serine ethanolaminephosphotransferase activity","type":"related"},{"name":"serine-phosphinico-ethanolamine synthase activity","type":"related"},{"name":"serinephosphoethanolamine synthase activity","type":"related"}],"termid":"GO:0047494"}


id: PR:O75001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.03c","secondary_identifiers":["UniProtKB:O75001"],"synonyms":[{"name":"Spom972h-MCM7","type":"exact"},{"name":"minichromosome maintenance protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O75001"}


id: GO:0030677
data:
  {"annotated_genes":["SJAG_06613","SJAG_02547","SJAG_01369","SJAG_00306","SJAG_00955","SJAG_04582","SJAG_03234","SJAG_01623","SJAG_04916","SJAG_02553","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99489,71611,71039,91050,71377,63531,104559,115416,115328,118618,60509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNase P complex","type":"exact"}],"termid":"GO:0030677","terms_by_termid":{"GO:0005655":null}}


id: MONDO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inability to regulate blood glucose levels resulting in hyperglycemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"},{"relation_name":"is_a","term_name":"glucose-galactose malabsorption","termid":"MONDO:0011731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"glucose intolerance","secondary_identifiers":["NCIT:C34646","MEDGEN:75760","ICD9:271.3","MESH:D018149","SCTID:267426009","DOID:10603","UMLS:C0271650","icd11.foundation:1392580302"],"synonyms":[{"name":"glucose: [intolerance] or [malabsorption]","type":"exact"},{"name":"glucose: intolerance","type":"exact"},{"name":"glucose: malabsorption","type":"exact"},{"name":"malabsorption of glucose","type":"exact"}],"termid":"MONDO:0001076","xrefs":{"Monarch":{"xref_id":"0001076"}}}


id: GO:0033204
data:
  {"annotated_genes":["SJAG_01623","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75898,79284],"is_not":false,"summary":null,"term":"GO:0033204"}]},"cv_name":"molecular_function","definition":"Binding to RNA subunit of ribonuclease P.","definition_xrefs":["GOC:pg","PMID:11455963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01623":null,"SJAG_03796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribonuclease P RNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNase P RNA binding","type":"exact"}],"termid":"GO:0033204","terms_by_termid":{"GO:0033204":null}}


id: MONDO:0019119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A channelopathy that involves the muscle tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular channelopathy","secondary_identifiers":["GARD:18917","Orphanet:71864","UMLS:C5681306","MEDGEN:1842600"],"synonyms":[{"name":"channelopathy of muscle tissue","type":"exact"},{"name":"muscle tissue channelopathy","type":"exact"}],"termid":"MONDO:0019119","xrefs":{"Monarch":{"xref_id":"0019119"}}}


id: GO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.","definition_xrefs":["PMID:7637000"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of phosphorylation of host RNA polymerase II (obsolete GO:0046793)","synonyms":[{"name":"induction by virus of modification of host RNA polymerase II","type":"broad"},{"name":"virus-induced modification of host RNA polymerase II","type":"exact"}],"termid":"GO:0046793"}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: PBO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit catalytic subunit Sen2 (predicted)","termid":"PBO:0000883"}


id: PBO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 2","termid":"PBO:0060520"}


id: GO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of abscisic acid from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"abscisic acid transmembrane transporter activity","synonyms":[{"name":"abscisic acid transporter activity","type":"exact"}],"termid":"GO:0090440"}


id: PBO:0058899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12117","termid":"PBO:0058899"}


id: GO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of peptidyl-glycine cholest-5-en-3-beta-ol ester at the carboxy-terminus of autolytically cleaved proteins.","definition_xrefs":["RESID:AA0309"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine (obsolete GO:0019708)","synonyms":[{"name":"peptidyl-glycine cholesteryl ester anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycine cholesteryl ester synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0019708"}


id: PBO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation_during_vegetative_growth","termid":"PBO:0035815"}


id: PBO:0053368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 280","termid":"PBO:0053368"}


id: PBO:0053103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 2","termid":"PBO:0053103"}


id: MONDO:0011582
data:
  {"annotated_genes":["SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85109],"is_not":false,"summary":null,"term":"MONDO:0011582"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605711","GARD:17661","Orphanet:401869","UMLS:C3276432","DOID:0080133","MEDGEN:478062"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","terms_by_termid":{"MONDO:0011582":null},"xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: GO:0018845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate. (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate is also known as trans-o-hydroxybenzylidenepyruvate.","definition_xrefs":["RHEA:27401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"2-hydroxychromene-2-carboxylate isomerase activity","secondary_identifiers":["MetaCyc:RXNN-386","UM-BBD_reactionID:r0337","KEGG_REACTION:R05137","EC:5.99.1.4"],"termid":"GO:0018845"}


id: MONDO:0009878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined pituitary hormone deficiencies, genetic form in which the cause of the disease is a mutation in the PROP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panhypopituitarism","termid":"MONDO:0019591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pituitary hormone deficiency, combined, 2","secondary_identifiers":["MESH:C563172","GARD:15222","MEDGEN:209236","UMLS:C0878683","OMIM:262600"],"synonyms":[{"name":"CPHD2","type":"related"},{"name":"Hanhart dwarfism","type":"related"},{"name":"PROP1 combined pituitary hormone deficiencies, genetic form","type":"exact"},{"name":"ateliotic dwarfism with hypogonadism","type":"related"},{"name":"combined pituitary hormone deficiencies, genetic form caused by mutation in PROP1","type":"exact"},{"name":"panhypopituitarism","type":"related"},{"name":"pituitary dwarfism 3","type":"related"},{"name":"pituitary hormone deficiency, combined, 2","type":"exact"},{"name":"pituitary hormone deficiency, combined, type 2","type":"exact"}],"termid":"MONDO:0009878","xrefs":{"Monarch":{"xref_id":"0009878"}}}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: PBO:0030127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_molybdenum_level","termid":"PBO:0030127"}


id: PBO:0080773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XKR4 antisense RNA 1","termid":"PBO:0080773"}


id: MOD:00014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-cysteine.","definition_xrefs":["DeltaMass:0","PubMed:3447159","PubMed:7338899","PubMed:15790858","PubMed:6692818","PubMed:1310545","ChEBI:29950","RESID:AA0005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine residue","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"(R)-cysteine","type":"exact"},{"name":"2-amino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-amino-3-mercaptopropionic acid","type":"exact"},{"name":"2-azanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"3-mercapto-L-alanine","type":"exact"},{"name":"Cys","type":"exact"},{"name":"Cysteine (C, Cys)","type":"exact"},{"name":"L-(+)-cysteine","type":"exact"},{"name":"L-cysteine","type":"exact"},{"name":"alpha-amino-beta-mercaptopropanoic acid","type":"exact"},{"name":"alpha-amino-beta-mercaptopropionic acid","type":"exact"},{"name":"alpha-amino-beta-thiolpropionic acid","type":"exact"},{"name":"beta-mercaptoalanine","type":"exact"},{"name":"half-cystine","type":"exact"},{"name":"thioserine","type":"exact"}],"termid":"MOD:00014"}


id: MONDO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 18 (obsolete MONDO:0044283)","secondary_identifiers":["OMIM:615457"],"synonyms":[{"name":"BMIQ18","type":"related"},{"name":"body MASS index quantitative trait locus 18","type":"related"},{"name":"obesity, susceptibility to","type":"related"},{"name":"obesity, susceptibility to, BMIQ18","type":"exact"}],"termid":"MONDO:0044283","xrefs":{"Monarch":{"xref_id":"0044283"}}}


id: PR:Q9HFR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00512","PANTHER:PTHR10678:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.04c","secondary_identifiers":["UniProtKB:Q9HFR0"],"synonyms":[{"name":"CSN complex subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SGN2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COPS2","type":"exact"}],"termid":"PR:Q9HFR0"}


id: PBO:0030875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vegetative_cell_population_growth_phenotype","termid":"PBO:0030875"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: MONDO:0975753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary hemangioma","secondary_identifiers":["UMLS:C5925092","MEDGEN:1864329","Orphanet:673543"],"termid":"MONDO:0975753","xrefs":{"Monarch":{"xref_id":"0975753"}}}


id: PBO:0088626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, SPNCRNA.1420 syntenic position","termid":"PBO:0088626"}


id: _global:has_ontology_root_term
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ontology_root_term","secondary_identifiers":["IAO:0000700"],"termid":"_global:has_ontology_root_term"}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: PBO:0086242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs","termid":"PBO:0086242"}


id: GO:0102494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A20 + O2 + a reduced electron acceptor = gibberellin A5 + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GA20 2,3-desaturase activity (obsolete GO:0102494)","termid":"GO:0102494"}


id: MONDO:0024315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the epicondyles by a parasite.","definition_xrefs":["NCIT:C34587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic endophthalmitis","secondary_identifiers":["UMLS:C0014238","icd11.foundation:935014361","SCTID:57100005","MEDGEN:4954","ICD9:360.13"],"synonyms":[{"name":"parasitic endophthalmitis","type":"exact"}],"termid":"MONDO:0024315","xrefs":{"Monarch":{"xref_id":"0024315"}}}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: FYPO:0004698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of heme binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased heme binding","synonyms":[{"name":"decreased haem binding","type":"exact"},{"name":"reduced heme binding","type":"exact"}],"termid":"FYPO:0004698"}


id: MONDO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dracunculiasis (Guinea worm disease) is a neglected tropical disease (NTD) characterized by a painful burning skin lesion from which the Dracunculus medinensis parasite emerges approximately 1 year after infection resulting from consumption of unsafe drinking water containing parasite-infected copepods (Cyclops spp., microcrustacea also called water fleas).","definition_xrefs":["Orphanet:231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dracunculiasis","secondary_identifiers":["NORD:1060","MedDRA:10013618","EFO:0007241","ICD9:125.7","MEDGEN:41653","DOID:14418","MESH:D004320","SCTID:396334002","UMLS:C0013100","icd11.foundation:1662537619","NCIT:C84677","GARD:6286","ICD10CM:B72"],"synonyms":[{"name":"Dracunculosis","type":"exact"},{"name":"Dracunculus medinensis caused disease or disorder","type":"exact"},{"name":"Dracunculus medinensis disease or disorder","type":"exact"},{"name":"Dracunculus medinensis infectious disease","type":"exact"},{"name":"GWD","type":"related"},{"name":"Guinea worm disease","type":"exact"},{"name":"Guinea worm infection","type":"related"},{"name":"Medina worm disease","type":"exact"},{"name":"dracontiasis","type":"exact"},{"name":"infection by Dracunculus medinensis","type":"exact"},{"name":"medinensis","type":"exact"},{"name":"parasitic infection caused by Dracunculus medinensis","type":"related"}],"termid":"MONDO:0016472","xrefs":{"Monarch":{"xref_id":"0016472"}}}


id: MONDO:0008868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliary malformation with renal tubular insufficiency","secondary_identifiers":["UMLS:C0400972","MEDGEN:98009","SCTID:235914003","MESH:C537726","OMIM:210550"],"synonyms":[{"name":"biliary malformation with renal tubular insufficiency","type":"exact"},{"name":"cholestatic jaundice and renal tubular insufficiency","type":"related"}],"termid":"MONDO:0008868","xrefs":{"Monarch":{"xref_id":"0008868"}}}


id: PBO:0087627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; mutant has increased aneuploidy tolerance","termid":"PBO:0087627"}


id: MONDO:0007799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic bone disease","secondary_identifiers":["MESH:C564145","UMLS:C1840321","MEDGEN:333534","OMIM:146350"],"synonyms":[{"name":"HBD","type":"related"},{"name":"hypophosphatemic bone disease","type":"exact"}],"termid":"MONDO:0007799","xrefs":{"Monarch":{"xref_id":"0007799"}}}


id: GO:0052484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052484)","synonyms":[{"name":"negative regulation by organism of symbiont ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052484"}


id: GO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to a build-up of toxins in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"},{"relation_name":"part_of","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to toxin","termid":"GO:0060276"}


id: GO:1990605
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96038],"is_not":false,"summary":null,"term":"GO:1990605"}]},"cv_name":"molecular_function","definition":"Binding to an RNA molecule containing GU repeats.","definition_xrefs":["PMID:20081200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"GU repeat RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990605","terms_by_termid":{"GO:1990605":null}}


id: PBO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 10","termid":"PBO:0048509"}


id: GO:1900239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenotypic switching","synonyms":[{"name":"regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900239"}


id: MONDO:1010672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary macrothrombocytes and mild-to-moderate thrombocytopenia with a bleeding tendency in dogs due to a variation in the GP9 gene.","definition_xrefs":["PMID:31484196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, dog","termid":"MONDO:1012273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bernard-Soulier syndrome, GP9-related, dog","secondary_identifiers":["OMIA:002207-9615"],"synonyms":[{"name":"Bernard-Soulier syndrome type C, dog","type":"related"},{"name":"hemorrhagiparous thrombocytic dystrophy, dog","type":"exact"}],"termid":"MONDO:1010672","xrefs":{"Monarch":{"xref_id":"1010672"}}}


id: PBO:0085710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in splicing Group I aI5-beta intron from COX1 mRNA; mitochondrial matrix protein","termid":"PBO:0085710"}


id: MONDO:0971034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma that is characterized by the presence of cribriform, trabecular, follicular, papillary, and solid growth patterns and squamoid morulae formation.","definition_xrefs":["DOID:0081458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland cribriform morular carcinoma","secondary_identifiers":["UMLS:C4289734","MEDGEN:927266"],"termid":"MONDO:0971034","xrefs":{"Monarch":{"xref_id":"0971034"}}}


id: MONDO:1011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstetric disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder, non-human animal","termid":"MONDO:1011339","xrefs":{"Monarch":{"xref_id":"1011339"}}}


id: PBO:0004610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase Nop2 (predicted)","termid":"PBO:0004610"}


id: PBO:0081548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 468","termid":"PBO:0081548"}


id: PBO:0050159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 15","termid":"PBO:0050159"}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: GO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["PMID:18430235","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked ubiquitination (obsolete GO:0070535)","termid":"GO:0070535"}


id: GO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}


id: GO:2000605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"regulation of secondary growth","termid":"GO:2000603"},{"relation_name":"positively_regulates","term_name":"secondary growth","termid":"GO:0080117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary growth","termid":"GO:2000605"}


id: MONDO:0011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with coloboma 2","secondary_identifiers":["GARD:15385","UMLS:C1854018","MEDGEN:343030","MESH:C565300","OMIM:605738"],"synonyms":[{"name":"MCOPCB2","type":"exact"},{"name":"microphthalmia, colobomatous, isolated 2","type":"related"},{"name":"microphthalmia, isolated, with coloboma 2","type":"related"}],"termid":"MONDO:0011589","xrefs":{"Monarch":{"xref_id":"0011589"}}}


id: PBO:0040187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase 1","termid":"PBO:0040187"}


id: PBO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 1 receptor","termid":"PBO:0043984"}


id: PBO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde1 (predicted)","termid":"PBO:0016990"}


id: GO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 6-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.133-RXN","Reactome:R-HSA-1855197","Reactome:R-HSA-2267372","KEGG_REACTION:R03429"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"IP3 6-kinase activity","type":"broad"},{"name":"Ins(1,3,4)P3 6-kinase activity","type":"related"},{"name":"inositol 1,3,4-trisphosphate 6-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"ins(1,3,4)P(3) 6-kinase activity","type":"related"}],"termid":"GO:0052725"}


id: GO:0072765
data:
  {"annotated_genes":["SJAG_02624","SJAG_02761","SJAG_01805","SJAG_05196","SJAG_00727","SJAG_02737","SJAG_03126","SJAG_00794","SJAG_04076","SJAG_01745","SJAG_03540","SJAG_02814","SJAG_02299","SJAG_03683","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[109979,89547,91307,102820,116967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[93766,100380,95283,115950,118691,99222,109156,102439,118176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"A cellular localization process in which a centromere/kinetochore is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02299":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03126":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centromere localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of kinetochore localization","type":"exact"},{"name":"kinetochore localisation","type":"exact"},{"name":"kinetochore localization","type":"exact"}],"termid":"GO:0072765","terms_by_termid":{"GO:0072766":null,"GO:0098653":null,"GO:1990571":null}}


id: PBO:0053544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 550","termid":"PBO:0053544"}


id: PBO:0051590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20 receptor subunit beta","termid":"PBO:0051590"}


id: PBO:0063279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 5","termid":"PBO:0063279"}


id: GO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs after induction by phorbol-12-myristate-13-acetate (PMA), a protein kinase C agonist.","definition_xrefs":["PMID:12714508"],"gene_count":0,"genotype_count":0,"name":"obsolete PMA-inducible membrane protein ectodomain proteolysis (obsolete GO:0051088)","termid":"GO:0051088"}


id: MONDO:0006676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beriberi is a condition that occurs in people who are deficient in thiamine (vitamin B1). There are two major types of beriberi: wet beriberi which affects the cardiovascular system and dry beriberi which affects the nervous system. People with wet beriberi may experience increased heart rate, shortness of breath, and swelling of the lower legs. Signs and symptoms of dry beriberi include difficulty walking; loss of feeling in the hands and/or feet; paralysis of the lower legs; mental confusion; speech difficulty; pain; and/or vomiting. Beriberi is rare in the United States since many foods are now vitamin enriched; however, alcohol abuse, dialysis and taking high doses of diuretics increases the risk of developing the condition. In most cases,beriberi occurs sporadically in people with no family history of the condition. A rare condition known as genetic beriberi is inherited (passed down through families) and is associated with an inability to absorb thiamine from foods. Treatment generally includes thiamine supplementation, given by injection or taken by mouth.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beriberi","secondary_identifiers":["DOID:0070313","DOID:13725","EFO:1000837","MedDRA:10004482","MEDGEN:543","NCIT:C34418","UMLS:C0005122","MESH:D001602","icd11.foundation:632832064","SCTID:36656008","ICD9:265.0"],"synonyms":[{"name":"Beri Beri","type":"exact"},{"name":"thiamine deficiency","type":"exact"},{"name":"vitamin B1 deficiency","type":"exact"}],"termid":"MONDO:0006676","xrefs":{"Monarch":{"xref_id":"0006676"}}}


id: PBO:0081393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF232 antisense RNA 1","termid":"PBO:0081393"}


id: MONDO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the liver with species of mycobacterium, most often mycobacterium tuberculosis. It is characterized by localized small tuberculous miliary lesions or tumor-like mass (tuberculoma), and abnormalities in liver function tests.","definition_xrefs":["MESH:D014386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"},{"relation_name":"is_a","term_name":"endocrine tuberculosis","termid":"MONDO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic tuberculosis","secondary_identifiers":["ICD9:017.90","SCTID:186273003","EFO:0007302","MEDGEN:11944","DOID:407","UMLS:C0041313"],"synonyms":[{"name":"tuberculosis of liver","type":"exact"}],"termid":"MONDO:0005787","xrefs":{"Monarch":{"xref_id":"0005787"}}}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: SO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U5 RNA is a component of both types of known spliceosome. The precise function of this molecule is unknown, though it is known that the 5' loop is required for splice site selection and p220 binding, and that both the 3' stem-loop and the Sm site are important for Sm protein binding and cap methylation.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U5_snRNA"],"synonyms":[{"name":"U5 small nuclear RNA","type":"exact"},{"name":"U5 snRNA","type":"exact"},{"name":"small nuclear RNA U5","type":"exact"},{"name":"snRNA U5","type":"exact"}],"termid":"SO:0000395"}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: GO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an endocannabinoid binding to a cell surface receptor. The pathway proceeds with the receptor transmitting the signal to a heterotrimeric G-protein complex and ends with regulation of a downstream cellular process, e.g. transcription. Endocannabinoids are small molecules derived from arachidonic acid, anandamide (arachidonoylethanolamide) and 2-arachidonoylglycerol.","definition_xrefs":["GOC:mah","PMID:15550444","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid signaling pathway","termid":"GO:0038171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway","synonyms":[{"name":"endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:0071926"}


id: PBO:0049770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 8","termid":"PBO:0049770"}


id: PBO:0087981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair","termid":"PBO:0087981"}


id: GO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"cortisol metabolic process","termid":"GO:0034650"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cortisol biosynthetic process","synonyms":[{"name":"cortisol anabolism","type":"narrow"},{"name":"cortisol biosynthesis","type":"exact"},{"name":"cortisol formation","type":"exact"},{"name":"cortisol synthesis","type":"exact"}],"termid":"GO:0034651"}


id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: MONDO:0008706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ackerman syndrome is characterized by pyramidal molar roots and taurodontism, associated with variable anomalies. It has been described in two generations of one family. Both parents and their six sibs had pyramidal, taurodont or fused molar roots. Some of the patients also had hypotrichosis, an abnormal upper lip, thickened and wide philtrum, and/or juvenile glaucoma. Other features included entropion of the eyelid, syndactyly and clinodactyly of the fifth fingers.","definition_xrefs":["Orphanet:2561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ackerman syndrome","secondary_identifiers":["UMLS:C1860167","MEDGEN:395426","OMIM:200970","MESH:C538170","icd11.foundation:1946127088","SCTID:722280000","GARD:469"],"synonyms":[{"name":"Ackerman fused molar rooth syndrome","type":"exact"},{"name":"Ackerman syndrome","type":"exact"},{"name":"glaucoma, juvenile, with unusual upper lip and dental roots","type":"related"},{"name":"juvenile glaucoma with unusual upper lip and dental roots","type":"related"},{"name":"molar roots, pyramidal, with juvenile glaucoma and unusual upper lip","type":"related"},{"name":"pyramidal molar-glaucoma-upper abnormal lip syndrome","type":"exact"},{"name":"pyramidal molars, glaucoma, abnormal upper lip","type":"related"}],"termid":"MONDO:0008706","xrefs":{"Monarch":{"xref_id":"0008706"}}}


id: GO:0140445
data:
  {"annotated_genes":["SJAG_02348","SJAG_00939","SJAG_03722","SJAG_05105","SJAG_05979","SJAG_04586","SJAG_03780","SJAG_04372","SJAG_03048","SJAG_02768","SJAG_04097","SJAG_02863","SJAG_04245","SJAG_00378","SJAG_01378","SJAG_02771","SJAG_04700","SJAG_03298","SJAG_05353","SJAG_02194","SJAG_03720","SJAG_04863","SJAG_04140","SJAG_03844","SJAG_06560","SJAG_02116","SJAG_05372","SJAG_04201","SJAG_00640","SJAG_04183","SJAG_02908","SJAG_03982","SJAG_01698","SJAG_00676","SJAG_00429","SJAG_00293","SJAG_04400","SJAG_01777","SJAG_03128","SJAG_01377","SJAG_03092","SJAG_04150","SJAG_06642","SJAG_01675","SJAG_01605","SJAG_00884","SJAG_05373","SJAG_03026","SJAG_06597","SJAG_02872","SJAG_03855","SJAG_01864","SJAG_00364","SJAG_02778","SJAG_02212","SJAG_02818","SJAG_05173","SJAG_05239","SJAG_02576","SJAG_04205","SJAG_03685","SJAG_02621","SJAG_02362","SJAG_01837","SJAG_03356","SJAG_00934","SJAG_02563","SJAG_05260","SJAG_03460","SJAG_04186","SJAG_04190","SJAG_03287"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70866,87349,88490,89070,90590,91390,92033,92488,97407,98273,99184,99457,99553,99917,100858,101135,102346,104146,104181,106156,106623,107355,108127,108165,109116,110228,111198,111542,111556,111736,112110,112522,112839,112892,112942,112943,112944,112945,112946,113303,116271,116340,118113,118642,57569,58243,58601,58855,59193,59328,59844,59952,60178,61264,63775,65935,66087,66419,67179,69200,69317,77107,116684],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[63197,110384],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990879"},{"annotations":[89717,115966,91802,79746,95059,99719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070187"},{"annotations":[107945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000782"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein that seals the end of a chromosome. The telomeric repeat DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA and seal the telomeric loop.","definition_xrefs":["PMID:11352055","PMID:30208292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, telomeric region","termid":"GO:0000781"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00364":null,"SJAG_00378":null,"SJAG_00429":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00884":null,"SJAG_00934":null,"SJAG_00939":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01605":null,"SJAG_01675":null,"SJAG_01698":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_01864":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02621":null,"SJAG_02768":null,"SJAG_02771":null,"SJAG_02778":null,"SJAG_02818":null,"SJAG_02863":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03128":null,"SJAG_03287":null,"SJAG_03298":null,"SJAG_03356":null,"SJAG_03460":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03844":null,"SJAG_03855":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04140":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04186":null,"SJAG_04190":null,"SJAG_04201":null,"SJAG_04205":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04400":null,"SJAG_04586":null,"SJAG_04700":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05260":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06560":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"chromosome, telomeric repeat region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0140445","terms_by_termid":{"GO:0000782":null,"GO:0070187":null,"GO:0140445":null,"GO:1990879":null}}


id: FYPO:0006665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy of the nucleus occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PMID:30116786","GO:0044804","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleophagy during G0","synonyms":[{"name":"increased autophagy of nucleus during G0","type":"exact"},{"name":"increased nucleophagy during cell quiescence","type":"exact"},{"name":"increased nucleophagy during quiescence","type":"exact"}],"termid":"FYPO:0006665"}


id: PBO:0055248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2675","termid":"PBO:0055248"}


id: GO:0031732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR7 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR7 chemokine receptor binding","synonyms":[{"name":"CCR7 chemokine receptor ligand","type":"narrow"},{"name":"MIP-3 beta receptor binding","type":"exact"},{"name":"type 1 EBV-induced G-protein coupled receptor binding","type":"exact"}],"termid":"GO:0031732"}


id: PBO:0054253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1637","termid":"PBO:0054253"}


id: GO:0006283
data:
  {"annotated_genes":["SJAG_04353","SJAG_02116","SJAG_04778","SJAG_03206","SJAG_04540","SJAG_00119","SJAG_00329","SJAG_01540","SJAG_01480","SJAG_03454","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69906,71645,78807,88129,88314,90219,90834,91128,91944,96717,109396],"is_not":false,"summary":null,"term":"GO:0006283"}]},"cv_name":"biological_process","definition":"The nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["PMID:11900249","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00329":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_02116":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_04114":null,"SJAG_04353":null,"SJAG_04540":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6781827"],"synonyms":[{"name":"TC-NER","type":"exact"},{"name":"TCR","type":"related"},{"name":"transcription-coupled NER","type":"exact"},{"name":"transcription-coupled repair","type":"exact"}],"termid":"GO:0006283","terms_by_termid":{"GO:0006283":null}}


id: GO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"positively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of white fat cell proliferation","synonyms":[{"name":"activation of white fat cell proliferation","type":"narrow"},{"name":"positive regulation of white adipocyte proliferation","type":"exact"},{"name":"positive regulation of white adipose cell proliferation","type":"exact"},{"name":"stimulation of white fat cell proliferation","type":"narrow"},{"name":"up regulation of white fat cell proliferation","type":"exact"},{"name":"up-regulation of white fat cell proliferation","type":"exact"},{"name":"upregulation of white fat cell proliferation","type":"exact"}],"termid":"GO:0070352"}


id: PBO:0071964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A3","termid":"PBO:0071964"}


id: PBO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A1","termid":"PBO:0039612"}


id: PBO:0070586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 52","termid":"PBO:0070586"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: GO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-glucuronic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"UDP-glucuronate transmembrane transport","synonyms":[{"name":"UDP-glucuronic acid transmembrane transport","type":"exact"},{"name":"UDP-glucuronic acid transport","type":"related"}],"termid":"GO:0015787"}


id: PBO:0051086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 4 (G4m marker)","termid":"PBO:0051086"}


id: PBO:0079276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription termination factor 2","termid":"PBO:0079276"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: GO:0015503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in), where glutathione maintains the closed state.","definition_xrefs":["PMID:11053405","TC:2.A.37.1.1","TC:2.A.37.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glutathione-regulated potassium exporter activity","termid":"GO:0015503"}


id: PBO:0088424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102","termid":"PBO:0088424"}


id: FYPO:0007462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased filamentous actin level","synonyms":[{"name":"increased F-actin level","type":"exact"},{"name":"increased accumulation of filamentous actin in cell","type":"related"},{"name":"increased cellular F-actin level","type":"exact"},{"name":"increased cellular filamentous actin level","type":"exact"},{"name":"increased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"increased filamentous actin level during vegetative growth","type":"exact"}],"termid":"FYPO:0007462"}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: MONDO:0017878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chapare hemorrhagic fever, caused by the Chapare virus (a new arenavirus), discovered from a small outbreak in Cochabamba, Bolivia between 2003 and 2004, is an acute viral hemorrhagic fever characterized by fever, myalgia, arthralgia, and multiple hemorrhagic signs. About a third of untreated cases go on to develop more severe symptoms with delirium, coma and convulsions and death (in one case). No other cases have been reported since.","definition_xrefs":["Orphanet:319244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chapare hemorrhagic fever","secondary_identifiers":["DOID:0050198","MEDGEN:900792","SCTID:716584007","GARD:21415","UMLS:C4274434"],"termid":"MONDO:0017878","xrefs":{"Monarch":{"xref_id":"0017878"}}}


id: MONDO:0008939
data:
  {"annotated_genes":["SJAG_02470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87163],"is_not":false,"summary":null,"term":"MONDO:0008939"}]},"cv_name":"mondo","definition":"Hypoplasia of the cerebellum that is associated with inherited metabolic disorders and neurodegenerative disorders. Signs and symptoms include mental and developmental delays, walking and balance difficulties, floppy muscle tone, and seizures.","definition_xrefs":["NCIT:C98890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated cerebellar hypoplasia/agenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18720","MESH:C562568","OMIM:213000","MEDGEN:1695950","NORD:910","Orphanet:1398","DOID:0070338","MedDRA:10008033","SCTID:16026008","UMLS:C5231391"],"synonyms":[{"name":"Cerebellar Agenesis","type":"exact"},{"name":"Chiari 4 malformation","type":"exact"},{"name":"Chiari IV malformation","type":"exact"},{"name":"cerebellar hypoplasia","type":"related"},{"name":"cerebellar hypoplasia/atrophy, epilepsy, and global developmental delay","type":"exact"},{"name":"congenital cerebellar Hypoplasia","type":"exact"},{"name":"isolated cerebellar agenesis","type":"related"},{"name":"near total absence of cerebellum","type":"exact"},{"name":"subtotal absence of cerebellum","type":"exact"}],"termid":"MONDO:0008939","terms_by_termid":{"MONDO:0008939":null},"xrefs":{"Monarch":{"xref_id":"0008939"}}}


id: PomGeneEx:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that indicates that the fraction of ribosomes that are translating each codon of an mRNA is lower under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PMID:29432178","PMID:33313903","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"ribosomal density","termid":"PomGeneEx:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density decreased","synonyms":[{"name":"decreased ribosomal density","type":"exact"},{"name":"ribosome density decreased","type":"exact"},{"name":"ribosome occupancy decreased","type":"exact"}],"termid":"PomGeneEx:0000027"}


id: PBO:0038772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T1","termid":"PBO:0038772"}


id: PBO:0042553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 16","termid":"PBO:0042553"}


id: PBO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-compact myelin associated protein","termid":"PBO:0060636"}


id: GO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume","synonyms":[{"name":"diuresis","type":"broad"},{"name":"elevation of urinary volume","type":"exact"},{"name":"increase in urine flow","type":"exact"}],"termid":"GO:0035810"}


id: GO:0052760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dinitrophenol + H- = 2,4-dinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["UM-BBD_reactionID:r1071","GOC:mengo_curators","PMID:11995829"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4-dinitrophenol reductase activity (obsolete GO:0052760)","synonyms":[{"name":"DNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4-dinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052760"}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: MONDO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iniencephaly","termid":"MONDO:0018968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"closed iniencephaly","secondary_identifiers":["SCTID:203927003","icd11.foundation:1780502952","UMLS:C0431286","GARD:20950","Orphanet:268366","MEDGEN:608901"],"termid":"MONDO:0017061","xrefs":{"Monarch":{"xref_id":"0017061"}}}


id: MONDO:0018211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Balint syndrome is a rare neurologic disease characterized by the triad of optic ataxia, ocular apraxia and simultanagnosia due to posterior parietal lobe lesions. Patients report ophthalmologic difficulties in the absence of underlying ophthalomologic anomalies and present severe visual and spatial disabilities in locating and reaching objects, initiating voluntary eye movements and perceiving more than one object at a time.","definition_xrefs":["Orphanet:363746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Balint syndrome","secondary_identifiers":["icd11.foundation:491228434","MEDGEN:1646315","GARD:21558","SCTID:765212008","UMLS:C4707368"],"synonyms":[{"name":"Balint-Holmes syndrome","type":"exact"},{"name":"optic ataxia-gaze apraxia-simultanagnosia syndrome","type":"exact"},{"name":"psychic paralysis of visual fixation","type":"exact"}],"termid":"MONDO:0018211","xrefs":{"Monarch":{"xref_id":"0018211"}}}


id: PR:O14369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 4B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein sce3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.04c","secondary_identifiers":["UniProtKB:O14369"],"synonyms":[{"name":"Spom972h-EIF4B","type":"exact"}],"termid":"PR:O14369"}


id: MONDO:0035375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"post-COVID-19 disorder","termid":"MONDO:0100320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multisystem inflammatory syndrome in children and adults","secondary_identifiers":["Orphanet:598363","GARD:22403","UMLS:C5680268","MEDGEN:1842571"],"synonyms":[{"name":"MIS-C/A","type":"exact"}],"termid":"MONDO:0035375","xrefs":{"Monarch":{"xref_id":"0035375"}}}


id: PBO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DXZ4 associated non-coding transcript 2, distal","termid":"PBO:0044541"}


id: GO:0000400
data:
  {"annotated_genes":["SJAG_02294","SJAG_02708","SJAG_04752","SJAG_02690","SJAG_02262","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77912,78496,79552,94847,106090],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[75211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["PMID:15563464","GOC:krc","ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Holliday junction binding","type":"exact"},{"name":"forked DNA binding","type":"broad"}],"termid":"GO:0000400","terms_by_termid":{"GO:0000400":null,"GO:0000402":null}}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: GO:0075231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of spore movement on or near host (obsolete GO:0075231)","termid":"GO:0075231"}


id: PBO:0042391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300LD antisense RNA 1","termid":"PBO:0042391"}


id: PBO:0065943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 3","termid":"PBO:0065943"}


id: PBO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Mot1 (predicted)","termid":"PBO:0004129"}


id: FYECO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amitrole (3-amino-1,2,4-triazole) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amitrole","synonyms":[{"name":"+ 3-AT","type":"exact"},{"name":"+ 3-amino-1,2,4-triazole","type":"exact"},{"name":"+ 3AT","type":"exact"}],"termid":"FYECO:0000251"}


id: PBO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121A","termid":"PBO:0075071"}


id: CHEBI:52651
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin","termid":"CHEBI:52651"}


id: GO:0034739
data:
  {"annotated_genes":["SJAG_03627","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97207,109489],"is_not":false,"summary":null,"term":"GO:0034739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["PMID:28450737","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0019213","GO:0016787","GO:0033558","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"histone H4K16 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K16 deacetylase activity","type":"exact"},{"name":"histone H4K12 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0034739","terms_by_termid":{"GO:0034739":null}}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: MONDO:0009450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with excessively long cilia","secondary_identifiers":["MESH:C536287","ICD9:759.89","SCTID:233665006","MEDGEN:90947","GARD:2982","UMLS:C0340036","OMIM:242680"],"synonyms":[{"name":"ciliary dyskinesia with excessively long cilia","type":"exact"},{"name":"immotile cilia syndrome due to excessively long cilia","type":"related"}],"termid":"MONDO:0009450","xrefs":{"Monarch":{"xref_id":"0009450"}}}


id: MONDO:0014673
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85056],"is_not":false,"summary":null,"term":"MONDO:0014673"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LSS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 44","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16127","OMIM:616509","DOID:0110267","MEDGEN:907487","UMLS:C4225300"],"synonyms":[{"name":"CTRCT44","type":"exact"},{"name":"LSS early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 44","type":"exact"},{"name":"cataract type 44","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in LSS","type":"exact"},{"name":"total early-onset cataract","type":"broad"}],"termid":"MONDO:0014673","terms_by_termid":{"MONDO:0014673":null},"xrefs":{"Monarch":{"xref_id":"0014673"}}}


id: PBO:0066491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 2","termid":"PBO:0066491"}


id: PBO:0050440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 1","termid":"PBO:0050440"}


id: FYPO:0005067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane (DETA NONOate). Cells stop growing (and may die) at a concentration of 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","synonyms":[{"name":"hypersensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","type":"exact"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during vegetative growth","type":"exact"},{"name":"sensitive to DETA NONOate","type":"exact"},{"name":"sensitive to diethylenetriamine NONOate","type":"exact"}],"termid":"FYPO:0005067"}


id: GO:2001024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"negatively_regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to drug","synonyms":[{"name":"negative regulation of drug resistance","type":"related"},{"name":"negative regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001024"}


id: PBO:0049228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 2","termid":"PBO:0049228"}


id: PBO:0039462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 2","termid":"PBO:0039462"}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: MONDO:0017314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome type IV, also known as the vascular type of Ehlers-Danlos syndrome (EDS), is an inherited connective tissue disorder defined by characteristic facial features (acrogeria) in most patients, translucent skin with highly visible subcutaneous vessels on the trunk and lower back, easy bruising, and severe arterial, digestive and uterine complications, which are rarely, if at all, observed in the other forms of EDS.","definition_xrefs":["Orphanet:286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, vascular type","secondary_identifiers":["NANDO:1200648","GARD:2082","icd11.foundation:1202686415","UMLS:C0268338","MEDGEN:82790","NANDO:2201258","NCIT:C125699","SCTID:17025000"],"synonyms":[{"name":"EDS IV","type":"exact"},{"name":"EDS IV (formerly)","type":"related"},{"name":"EDS type 4","type":"exact"},{"name":"EDS type 4 (formerly)","type":"related"},{"name":"EDS4 (formerly)","type":"related"},{"name":"Ehlers Danlos syndrome, arterial type","type":"related"},{"name":"Ehlers Danlos syndrome, ecchymotic type","type":"related"},{"name":"Ehlers Danlos syndrome, sack-Barabas type","type":"related"},{"name":"Ehlers-Danlos syndrome type 4","type":"exact"},{"name":"Ehlers-Danlos syndrome type 4 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type IV","type":"exact"},{"name":"Ehlers-Danlos syndrome type IV (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, type IV","type":"exact"},{"name":"Ehlers-Danlos syndrome, vascular type","type":"exact"},{"name":"sack-Barabas syndrome","type":"exact"},{"name":"vEDS","type":"related"},{"name":"vascular EDS","type":"related"},{"name":"vascular Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0017314","xrefs":{"Monarch":{"xref_id":"0017314"}}}


id: PBO:0034756
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric","termid":"PBO:0034756"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: SO:1000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000095 sequence_variant_causing_nonconservative_amino_acid_substitution (obsolete SO:1000095)","synonyms":[{"name":"mutation causing nonconservative amino acid substitution","type":"related"},{"name":"sequence variant causing nonconservative amino acid substitution","type":"exact"}],"termid":"SO:1000095"}


id: GO:0031936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing (obsolete GO:0031936)","synonyms":[{"name":"down regulation of chromatin silencing","type":"exact"},{"name":"down-regulation of chromatin silencing","type":"exact"},{"name":"downregulation of chromatin silencing","type":"exact"},{"name":"inhibition of chromatin silencing","type":"narrow"},{"name":"loss of chromatin silencing","type":"exact"},{"name":"negative regulation of heterochromatic silencing","type":"exact"}],"termid":"GO:0031936"}


id: PBO:0044972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 9","termid":"PBO:0044972"}


id: MONDO:0016803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unspecified inborn mitochondrial disorder (obsolete MONDO:0016803)","secondary_identifiers":["Orphanet:254837"],"synonyms":[{"name":"unspecified mitochondrial disorder","type":"exact"}],"termid":"MONDO:0016803","xrefs":{"Monarch":{"xref_id":"0016803"}}}


id: GO:0008494
data:
  {"annotated_genes":["SJAG_01517","SJAG_02043","SJAG_05000","SJAG_04959","SJAG_01249","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88525,98706,99455,100462,101918,112690],"is_not":false,"summary":null,"term":"GO:0008494"}]},"cv_name":"molecular_function","definition":"Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_03550":null,"SJAG_04959":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008494","terms_by_termid":{"GO:0008494":null}}


id: PBO:0113187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid transport protein; involved in vacuolar protein sorting, protein retention in the Golgi, prospore membrane formation and sporulation; required for mitochondrial integrity and ER packaging into autophagosomes during cortical reticulophagy; peripheral membrane protein found at the prospore membrane and at membrane contact sites; contains a PH-like domain; homologous to human CHAC and COH1, involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0113187"}


id: GO:0102944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + medicagenate = UDP(3-) + a medicagenate monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete medicagenate UDP-glucosyltransferase activity (obsolete GO:0102944)","termid":"GO:0102944"}


id: PR:O94370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.04 gene.","definition_xrefs":["UniProtKB:O94370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1604.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.04","synonyms":[{"name":"Spom972h-SPBC1604.04","type":"exact"}],"termid":"PR:O94370"}


id: _global:regulates_transport_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","secondary_identifiers":["RO:0002011"],"termid":"_global:regulates_transport_of"}


id: PR:O94438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.04c","synonyms":[{"name":"S3aE-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps102","type":"exact"}],"termid":"PR:O94438"}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: GO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the presence of light.","definition_xrefs":["GOC:yaf","PMID:12242396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"light-dependent chlorophyll biosynthetic process","synonyms":[{"name":"light dependent chlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent chlorophyll anabolism","type":"exact"},{"name":"light-dependent chlorophyll biosynthesis","type":"exact"},{"name":"light-dependent chlorophyll formation","type":"exact"},{"name":"light-dependent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036067"}


id: SO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a catalytic site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inactive_ligand_binding_site","termid":"SO:0001560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_catalytic_site","synonyms":[{"name":"inactive catalytic site","type":"exact"}],"termid":"SO:0001618"}


id: PBO:0086664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086664"}


id: GO:2000450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell extravasation","termid":"GO:2000408"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"}


id: PBO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt3 (predicted)","termid":"PBO:0005755"}


id: PBO:0072687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 3B","termid":"PBO:0072687"}


id: GO:0014068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade.","definition_xrefs":["GOC:ef"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase signaling (obsolete GO:0014068)","synonyms":[{"name":"activation of phosphoinositide 3-kinase cascade","type":"narrow"},{"name":"positive regulation of PI 3-kinase cascade","type":"exact"},{"name":"positive regulation of PI3K cascade","type":"exact"},{"name":"positive regulation of phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"positive regulation of phosphoinositide 3-kinase cascade","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase cascade","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase cascade","type":"exact"}],"termid":"GO:0014068"}


id: MONDO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"orbit neoplasm","termid":"MONDO:0024611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbital cancer","secondary_identifiers":["DOID:4143","ICD9:190.1","ICD9:239.89","UMLS:C0153626","NCIT:C3290","EFO:0007408","NCIT:C3562","SCTID:127003006","MEDGEN:56314"],"synonyms":[{"name":"cancer of orbit of skull","type":"exact"},{"name":"malignant neoplasm of orbit","type":"exact"},{"name":"malignant neoplasm of orbit of skull","type":"exact"},{"name":"malignant neoplasm of the orbit","type":"exact"},{"name":"malignant orbit neoplasm","type":"exact"},{"name":"malignant orbit of skull neoplasm","type":"exact"},{"name":"malignant orbit tumor","type":"exact"},{"name":"malignant orbit tumour","type":"exact"},{"name":"malignant orbital neoplasm","type":"exact"},{"name":"malignant orbital tumor","type":"exact"},{"name":"malignant orbital tumour","type":"exact"},{"name":"malignant tumor of orbit","type":"exact"},{"name":"malignant tumor of the orbit","type":"exact"},{"name":"malignant tumour of orbit","type":"exact"},{"name":"malignant tumour of the orbit","type":"exact"},{"name":"neoplasm of orbit proper","type":"broad"},{"name":"orbit cancer","type":"exact"},{"name":"orbit of skull cancer","type":"exact"},{"name":"orbital tumor","type":"broad"},{"name":"orbital tumour","type":"broad"}],"termid":"MONDO:0002889","xrefs":{"Monarch":{"xref_id":"0002889"}}}


id: MONDO:0017342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-related tumor","secondary_identifiers":["GARD:21146","MEDGEN:1842315","Orphanet:289638","UMLS:C5679942"],"synonyms":[{"name":"EBV-related tumor","type":"exact"},{"name":"EBV-related tumour","type":"exact"}],"termid":"MONDO:0017342","xrefs":{"Monarch":{"xref_id":"0017342"}}}


id: GO:0060909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"part_of","term_name":"plasmid copy number maintenance","termid":"GO:0060908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}


id: GO:0006613
data:
  {"annotated_genes":["SJAG_00360","SJAG_01733","SJAG_00175","SJAG_02208","SJAG_02330","SJAG_03684","SJAG_01840","SJAG_04129","SJAG_02456","SJAG_01282","SJAG_00959","SJAG_03411","SJAG_01558","SJAG_01759","SJAG_00064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97903],"is_not":false,"summary":null,"term":"GO:0006613"},{"annotations":[94250,68766,72866,69764,66216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[91596,114385,115155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[73119,73432,102587,108326,75360,98043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.","definition_xrefs":["PMID:10512867","PMID:16896215","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01558":null,"SJAG_01733":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"cotranslational protein targeting to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotranslational membrane targeting","type":"exact"},{"name":"cotranslational protein membrane targeting","type":"exact"},{"name":"cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006613","terms_by_termid":{"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null}}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: MONDO:0016291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Herrmann-Opitz type is a rare bone development disorder characterized by intellectual disability, short stature, turribrachycephaly, facial dysmorphism (i.e. severe hypertelorism, hypoplasia of supraorbital ridges, abnormal ears, and micrognathia), bony defects of the occiput, and digital anomalies (incl. syndactyly, oligodactyly, and/or brachydactyly). Urethral atresia has also been reported. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis, Herrmann-Opitz type","secondary_identifiers":["GARD:18762","icd11.foundation:2048918601","UMLS:C4706536","MEDGEN:1633959"],"synonyms":[{"name":"Herrmann Opitz craniosynostosis","type":"related"}],"termid":"MONDO:0016291","xrefs":{"Monarch":{"xref_id":"0016291"}}}


id: PBO:0086935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; required for endosome-to-Golgi, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6","termid":"PBO:0086935"}


id: PBO:0076986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 4","termid":"PBO:0076986"}


id: FYPO:0003347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a catalytic activity differs from wild type.","definition_xrefs":["PMID:23091597","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"altered substrate specificity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity","type":"exact"}],"termid":"FYPO:0003347"}


id: PBO:0028922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_glucose_starvation","termid":"PBO:0028922"}


id: GO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of sarcosine (N-methylglycine) into non-coded peptides.","definition_xrefs":["RESID:AA0063"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-sarcosine incorporation (obsolete GO:0019736)","termid":"GO:0019736"}


id: PBO:0072042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 12","termid":"PBO:0072042"}


id: MONDO:1010987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in puma.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, puma","secondary_identifiers":["OMIA:000487-9696"],"termid":"MONDO:1010987","xrefs":{"Monarch":{"xref_id":"1010987"}}}


id: PR:Q09729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rod1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain-containing protein C31A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.12","synonyms":[{"name":"Spom972h-rod1","type":"exact"}],"termid":"PR:Q09729"}


id: PBO:0049786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 21","termid":"PBO:0049786"}


id: PBO:0069588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 862, pseudogene","termid":"PBO:0069588"}


id: PBO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15 (predicted)","termid":"PBO:0000398"}


id: PBO:0046656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase D","termid":"PBO:0046656"}


id: GO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.","definition_xrefs":["PMID:18641129","PMID:22522702","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"midbody","termid":"GO:0030496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Flemming body","synonyms":[{"name":"Midbody ring","type":"related"}],"termid":"GO:0090543"}


id: GO:1902157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902157"}


id: PR:O94487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk35 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.06c","synonyms":[{"name":"Spom972h-mug27","type":"exact"},{"name":"meiotically up-regulated gene 27 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94487"}


id: SO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles:- Residue(i+1): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees. Residue(i+2): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_left_handed_type_one","secondary_identifiers":["BS:00215"],"synonyms":[{"name":"beta turn left handed type one","type":"exact"},{"name":"beta_turn_il","type":"exact"},{"name":"type I' beta turn","type":"exact"},{"name":"type I' turn","type":"exact"}],"termid":"SO:0001134"}


id: GO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow become mature B cells in the spleen. Transitional stage B cells are subdivided into transitional one (T1) and transitional two (T2) stages and are short-lived and functionally incompetent.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional stage B cell differentiation","synonyms":[{"name":"transitional stage B cell development","type":"related"},{"name":"transitional stage B lymphocyte differentiation","type":"exact"},{"name":"transitional stage B-cell differentiation","type":"exact"},{"name":"transitional stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002332"}


id: PBO:0087247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine kinase and DNA damage checkpoint effector; mediates cell cycle arrest via phosphorylation of Pds1p; phosphorylated by checkpoint signal transducer Mec1p; homolog of S. pombe and mammalian Chk1 checkpoint kinase","termid":"PBO:0087247"}


id: GO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxy-16-methoxy-2,3-dihydrotabersonine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + deacetoxyvindoline + H+.","definition_xrefs":["EC:2.1.1.99","RHEA:11336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04013","MetaCyc:2.1.1.99-RXN"],"synonyms":[{"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine methyltransferase activity","type":"related"},{"name":"3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"},{"name":"NMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"}],"termid":"GO:0030768"}


id: GO:1903952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:TermGenie","PMID:25281747","GOC:nc","GOC:BHF","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (obsolete GO:1903952)","synonyms":[{"name":"regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903952"}


id: PBO:0116522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase sequence feature types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_model","termid":"PBO:0116522"}


id: MONDO:0007031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of abdominal aortic aneurysm that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"abdominal aortic aneurysm","termid":"MONDO:0005350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial abdominal aortic aneurysm","secondary_identifiers":["Orphanet:86","UMLS:C4275172","SCTID:715364001","OMIMPS:100070","icd11.foundation:556590106","GARD:9181","MEDGEN:896628"],"synonyms":[{"name":"aortic aneurysm, familial abdominal","type":"exact"},{"name":"hereditary abdominal aortic aneurysm","type":"exact"}],"termid":"MONDO:0007031","xrefs":{"Monarch":{"xref_id":"0007031"}}}


id: GO:0030769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + macrocin = S-adenosyl-L-homocysteine + H+ + tylosin.","definition_xrefs":["EC:2.1.1.101","RHEA:17269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"macrocin O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02858","MetaCyc:MACROCIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine-macrocin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:macrocin 3'''-O-methyltransferase activity","type":"related"},{"name":"macrocin methyltransferase activity","type":"related"}],"termid":"GO:0030769"}


id: PBO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-5, pseudogene","termid":"PBO:0052913"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: GO:0009876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which pollen deposited on the stigma adheres to cells of the stigma.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"pollen adhesion","termid":"GO:0009876"}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: MONDO:0032697
data:
  {"annotated_genes":["SJAG_00600"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86048],"is_not":false,"summary":null,"term":"MONDO:0032697"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"Houge-Janssens syndrome","termid":"MONDO:0957553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00600":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Houge-Janssens syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1677130","OMIM:618354","UMLS:C5193048"],"synonyms":[{"name":"NEDLBA","type":"exact"},{"name":"neurodevelopmental disorder and language delay with or without structural brain abnormalities","type":"exact"}],"termid":"MONDO:0032697","terms_by_termid":{"MONDO:0032697":null},"xrefs":{"Monarch":{"xref_id":"0032697"}}}


id: PBO:0091522
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Devoid of Adenine Phosphoribosyltransferase activity","termid":"PBO:0091522"}


id: MONDO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by spasticity and hypertonia of the lower extremities bilaterally, particularly the legs, hips, and pelvis; this is the most common (70%) form of cerebral palsy.","definition_xrefs":["NCIT:C34781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia","secondary_identifiers":["ICD9:343.0","MESH:C537945","DOID:10965","MEDGEN:124371","MONDO:0022698","UMLS:C0270804","SCTID:281411007","SCTID:58193001"],"synonyms":[{"name":"Little disease","type":"exact"},{"name":"Little's disease","type":"exact"},{"name":"cerebral palsy spastic diplegic","type":"related"},{"name":"cerebral spastic infantile paralysis","type":"exact"},{"name":"diplegic infantile cerebral palsy","type":"exact"},{"name":"infantile diplegic cerebral palsy","type":"exact"},{"name":"infantile spastic cerebral palsy","type":"exact"}],"termid":"MONDO:0001167","xrefs":{"Monarch":{"xref_id":"0001167"}}}


id: FYPO:0008292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the cell division site plasma membrane is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","termid":"FYPO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased phosphatidylinositol-4,5-bisphosphate level in the cell division site plasma membrane","synonyms":[{"name":"increased cell sivision site plasma membrane PI(4,5)P2 level","type":"exact"}],"termid":"FYPO:0008292"}


id: PBO:0040924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin 2","termid":"PBO:0040924"}


id: MONDO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally uncorrected transposition of the great arteries (congenitally uncorrected TGA), also referred to as complete transposition, is a congenital cardiac malformation characterized by atrioventricular concordance and ventriculoarterial (VA) discordance.","definition_xrefs":["Orphanet:860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dextro-looped transposition of the great arteries","secondary_identifiers":["NANDO:1200698","UMLS:C5671327","GARD:5476","MEDGEN:1812310","OMIMPS:608808","DOID:0060770"],"synonyms":[{"name":"D-TGA","type":"exact"},{"name":"DTGA","type":"exact"},{"name":"congenitally uncorrected transposition of the great arteries","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels","type":"exact"},{"name":"isolated ventriculoarterial discordance","type":"exact"},{"name":"ventriculoarterial discordance with atrioventricular concordance","type":"exact"}],"termid":"MONDO:0019443","xrefs":{"Monarch":{"xref_id":"0019443"}}}


id: PBO:0076517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 19","termid":"PBO:0076517"}


id: PBO:0049038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 27","termid":"PBO:0049038"}


id: GO:0060294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of cilia mediated by motor proteins that contributes to the movement of a cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"part_of","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in cell motility","termid":"GO:0060294"}


id: PBO:0080121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 antisense RNA 1","termid":"PBO:0080121"}


id: GO:0097580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular sequestering of copper ion (obsolete GO:0097580)","synonyms":[{"name":"intracellular copper ion retention","type":"exact"},{"name":"intracellular copper ion sequestering","type":"exact"},{"name":"intracellular copper ion sequestration","type":"exact"},{"name":"intracellular copper ion storage","type":"exact"},{"name":"intracellular retention of copper ion","type":"exact"},{"name":"intracellular sequestration of copper ion","type":"exact"},{"name":"intracellular storage of copper ion","type":"exact"}],"termid":"GO:0097580"}


id: PBO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036059"}


id: PR:Q02061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00333","PRO:DNx","PANTHER:PTHR20856:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.01","secondary_identifiers":["UniProtKB:Q02061"],"synonyms":[{"name":"DNA-directed RNA polymerase II 138 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2B","type":"exact"}],"termid":"PR:Q02061"}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: GO:1902750
data:
  {"annotated_genes":["SJAG_00600","SJAG_02392","SJAG_02332","SJAG_01873","SJAG_00318","SJAG_01010","SJAG_00364","SJAG_02771","SJAG_03073","SJAG_04671","SJAG_03602","SJAG_01680","SJAG_01429","SJAG_01084","SJAG_00526","SJAG_00082","SJAG_01076","SJAG_01855","SJAG_04280","SJAG_02098","SJAG_04597","SJAG_04332","SJAG_02563","SJAG_03942","SJAG_05373","SJAG_02576","SJAG_02723","SJAG_02266","SJAG_01605","SJAG_01146","SJAG_01205","SJAG_02592","SJAG_03854","SJAG_01118","SJAG_03026","SJAG_03695","SJAG_03927","SJAG_06592","SJAG_03067","SJAG_01044","SJAG_00640","SJAG_04394","SJAG_02858","SJAG_03160","SJAG_02074","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106628,116085,91396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[101440,116030,100537,89952,94378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[117129,78803,74703,99191,91397,116087,100538,106631,99358,117302,70971,93931,79383,116828,109331,112050,72122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[95824,94510,98425,116032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[99360,117741,75153,79246,90171,91398,106632,117043,91761,72120,89075,111745,109332,100539,101053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[106663,112494,114490,108589,104502,94338,111451,92893,93185,78435,93535,100998,107027,111836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[78439,70452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"negatively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"down-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"downregulation of cell cycle G2/M phase transition","type":"exact"},{"name":"inhibition of cell cycle G2/M phase transition","type":"narrow"}],"termid":"GO:1902750","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null}}


id: PBO:0089197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1","termid":"PBO:0089197"}


id: PBO:0034449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Tf_body_formation","termid":"PBO:0034449"}


id: PBO:0088297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase","termid":"PBO:0088297"}


id: GO:0032829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0032829"}


id: PBO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses calcineurin deletion Rnc1","termid":"PBO:0004993"}


id: GO:0140036
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a ubiquitination modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"ubiquitin-modified protein reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein binding","type":"exact"}],"termid":"GO:0140036","terms_by_termid":{"GO:0061649":null}}


id: PBO:0042776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 85 like","termid":"PBO:0042776"}


id: GO:0015248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of sterols into, out of or within a cell, or between cells. Sterol are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol transporter activity (obsolete GO:0015248)","termid":"GO:0015248"}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: FYPO:0004180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24936793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"increased protein aggregate level","termid":"FYPO:0008358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular protein aggregate level","synonyms":[{"name":"increased cellular protein aggregate level during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004180"}


id: PBO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 3","termid":"PBO:0050542"}


id: MONDO:0000942
data:
  {"annotated_genes":["SJAG_00638","SJAG_02509","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"},{"annotations":[85957,85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the cornea. Representative examples include keratitis, bullous keratopathy, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:371.30","MEDGEN:3617","DOID:10124","ICD9:371.9","NCIT:C26731","MESH:D003316","SCTID:15250008","EFO:0009464","ICD9:371.89","UMLS:C0010034"],"synonyms":[{"name":"cornea disease","type":"exact"},{"name":"cornea disease or disorder","type":"exact"},{"name":"corneal disease","type":"exact"},{"name":"corneal disorder","type":"exact"},{"name":"disease of cornea","type":"exact"},{"name":"disease or disorder of cornea","type":"exact"},{"name":"disorder of cornea","type":"exact"}],"termid":"MONDO:0000942","terms_by_termid":{"MONDO:0007376":null,"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0000942"}}}


id: PR:Q96WV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureG-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.05c","synonyms":[{"name":"Spom972h-ure7","type":"exact"}],"termid":"PR:Q96WV0"}


id: GO:0102046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichlorobenzoate + O2 + a reduced electron acceptor = 3,4-dichlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["PMID:9322760","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3,4-dichlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10427"],"termid":"GO:0102046"}


id: MONDO:0035792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectovaginal fistula (obsolete MONDO:0035792)","secondary_identifiers":["Orphanet:601028"],"termid":"MONDO:0035792","xrefs":{"Monarch":{"xref_id":"0035792"}}}


id: FYPO:0003340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle is decreased when the cell is in a population that has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah","PMID:9199286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"decreased re-entry into mitotic cell cycle during recovery from stationary phase","synonyms":[{"name":"decreased re-entry into mitotic cell cycle following growth to stationary phase","type":"exact"},{"name":"reduced re-entry into mitotic cell cycle during recovery from stationary phase","type":"exact"}],"termid":"FYPO:0003340"}


id: PBO:0049014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPM6A divergent transcript","termid":"PBO:0049014"}


id: MONDO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Echinococcus granulosus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"echinococcosis","termid":"MONDO:0005738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echinococcus granulosus infectious disease","secondary_identifiers":["MEDGEN:508866","UMLS:C0152068","ICD9:122.3","SCTID:75006000","ICD9:122.4"],"synonyms":[{"name":"Echinococcus granulosus caused disease or disorder","type":"exact"},{"name":"Echinococcus granulosus disease or disorder","type":"exact"},{"name":"Echinococcus granulosus infectious disease","type":"exact"},{"name":"echinococcus granulosus infection","type":"exact"},{"name":"echinococcus granulosus infectious disease","type":"exact"},{"name":"unilocular hydatid disease","type":"related"}],"termid":"MONDO:0044346","xrefs":{"Monarch":{"xref_id":"0044346"}}}


id: MONDO:0014279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia, familial, 13 (obsolete MONDO:0014279)","termid":"MONDO:0014279","xrefs":{"Monarch":{"xref_id":"0014279"}}}


id: PBO:0070551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 17","termid":"PBO:0070551"}


id: PBO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine","termid":"PBO:0002055"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: SO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding alanyl tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine_tRNA_primary_transcript","synonyms":[{"name":"alanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000211"}


id: MONDO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Anaplastic thyroid carcinoma may represent the ultimate dedifferentiation step of thyroid tumorigenesis and is one of the most severe cancers in humans.","definition_xrefs":["Orphanet:142"],"gene_count":0,"genotype_count":0,"name":"obsolete anaplastic thyroid carcinoma (obsolete MONDO:0015423)","termid":"MONDO:0015423","xrefs":{"Monarch":{"xref_id":"0015423"}}}


id: GO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of hermaphrodite genitalia are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia morphogenesis (obsolete GO:0048815)","termid":"GO:0048815"}


id: GO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem.","definition_xrefs":["PMID:25352850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence phyllotactic patterning","termid":"GO:0090643"}


id: MONDO:0004761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urethral diverticulum (obsolete MONDO:0004761)","secondary_identifiers":["DOID:9341","ICD9:599.2"],"synonyms":[{"name":"obsolete urethral diverticulum (disease)","type":"exact"}],"termid":"MONDO:0004761","xrefs":{"Monarch":{"xref_id":"0004761"}}}


id: MONDO:0016558
data:
  {"annotated_genes":["SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013790"}]},"cv_name":"mondo","definition":"Congenital mirror movement disorder is a condition in which intentional movements of one side of the body are mirrored by involuntary movements of the other side. For example, when an affected individual makes a fist with the right hand, the left hand makes a similar movement. The mirror movements in this disorder primarily involve the upper limbs, especially the hands and fingers. This pattern of movements is present from infancy or early childhood and usually persists throughout life, without other associated signs and symptoms. Intelligence and lifespan are not affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"familial congenital mirror movements","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1966778637","MEDGEN:473166","DOID:0111153","OMIMPS:157600","Orphanet:238722","SCTID:229247004","GARD:12551","UMLS:C0454455"],"synonyms":[{"name":"CMM","type":"related"},{"name":"bimanual synkinesis","type":"related"},{"name":"congenital mirror movement disorder","type":"related"},{"name":"congenital mirror movements","type":"related"},{"name":"familial congenital controlateral synkinesia","type":"exact"},{"name":"familial congenital mirror movements","type":"exact"},{"name":"hereditary congenital controlateral synkinesia","type":"exact"},{"name":"hereditary congenital mirror movements","type":"exact"},{"name":"isolated congenital controlateral synkinesia","type":"exact"},{"name":"isolated congenital mirror movements","type":"exact"}],"termid":"MONDO:0016558","terms_by_termid":{"MONDO:0013790":null},"xrefs":{"Monarch":{"xref_id":"0016558"}}}


id: SO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between the 3'D-HEPTAMER and 3'D-NONAMER of a 3'D-RS.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_spacer","synonyms":[{"name":"3'D-SPACER","type":"exact"},{"name":"three prime D spacer","type":"exact"}],"termid":"SO:0000495"}


id: PBO:0057183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 338","termid":"PBO:0057183"}


id: MOD:01136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate","termid":"MOD:01136"}


id: MOD:01322
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:256#K","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionaldehyde +40","termid":"MOD:00579"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40 - site K","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:01322"}


id: GO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["PMID:12605307","PMID:11181628","PMID:11449884","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber adaptation","synonyms":[{"name":"skeletal muscle fiber plasticity","type":"related"},{"name":"skeletal muscle fibre plasticity","type":"exact"},{"name":"skeletal myofiber plasticity","type":"exact"},{"name":"skeletal myofibre plasticity","type":"exact"}],"termid":"GO:0043503"}


id: MOD:01444
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:11435113","PubMed:17558559","RESID:AA0492#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01444"}


id: PBO:0042422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 6","termid":"PBO:0042422"}


id: GO:2000772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular senescence","termid":"GO:2000772"}


id: GO:0009724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an abscisic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abscisic acid stimulus","synonyms":[{"name":"perception of abscisic acid stimulus","type":"related"}],"termid":"GO:0009724"}


id: MONDO:1011454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, non-human animal","secondary_identifiers":["OMIA:000754"],"termid":"MONDO:1011454","xrefs":{"Monarch":{"xref_id":"1011454"}}}


id: GO:0035514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA demethylase activity","termid":"GO:0035514"}


id: PBO:0043466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 6 like","termid":"PBO:0043466"}


id: PBO:0081099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 24","termid":"PBO:0081099"}


id: PBO:0068069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 374","termid":"PBO:0068069"}


id: GO:0070461
data:
  {"annotated_genes":["SJAG_01658","SJAG_02773","SJAG_00584","SJAG_02541","SJAG_00184","SJAG_04205","SJAG_04613","SJAG_03668","SJAG_01711","SJAG_00087","SJAG_03599","SJAG_02458","SJAG_02066","SJAG_02927","SJAG_00641","SJAG_01475","SJAG_04274","SJAG_03776","SJAG_03752"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91374,73876,62010,116308,58041,70829,71489,76655,88444,103366,57807,78872,77128,117593,73443,75386,63168,73655,66161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[63170,58347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A histone acetyltransferase complex that acetylates nucleosomal histones H2B, H3, or H4 and is required for the expression of a subset of Pol II-transcribed genes. This complex includes the acetyltransferases GCN5/KAT2A or PCAF/KAT2B, several proteins of the ADA, SGF and SPT families, and several TBP-associate proteins (TAFs).","definition_xrefs":["PMID:17337012","GOC:mah","PMID:10637607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"SAGA-type complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAGA family complex","type":"exact"}],"termid":"GO:0070461","terms_by_termid":{"GO:0000124":null,"GO:0046695":null}}


id: GO:0072702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methyl methanesulfonate (MMS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methyl methanesulfonate","synonyms":[{"name":"response to MMS","type":"exact"}],"termid":"GO:0072702"}


id: PBO:0056693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis/spermiogenesis associated 1","termid":"PBO:0056693"}


id: GO:0016418
data:
  {"annotated_genes":["SJAG_02158","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004313"},{"annotations":[62603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02158":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"S-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"termid":"GO:0016418","terms_by_termid":{"GO:0004313":null,"GO:0004742":null}}


id: CHEBI:29321
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium nitroprusside","termid":"CHEBI:29321"}


id: PBO:0027558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_alpha-glucan_level","termid":"PBO:0027558"}


