# genes

id: SJAG_03127
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77593],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[77592],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[111955],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[77591],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3E3","GOA:B6K3E3","EnsemblGenomes-Gn:SJAG_03127","InterPro:IPR002673","EnsemblGenomes-Tr:EEB08000"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":31,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl1b","uniquename":"SJAG_03122"},{"name":"smi1","uniquename":"SJAG_03123"},{"name":"pha2","uniquename":"SJAG_03124"},{"name":"naf1","uniquename":"SJAG_03125"},{"name":"dis2","uniquename":"SJAG_03126"},{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"}],"genes_by_uniquename":{"HGNC:10331":null,"SJAG_03127":null,"SPBC776.01":null,"YFR032C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal L29e protein family","id":"PF01779","interpro_description":"Large ribosomal subunit protein eL29","interpro_id":"IPR002673","interpro_name":"Ribosomal_eL29","locations":[{"end":42,"start":3}],"match_end":42,"match_start":3,"name":"Ribosomal_L29e"},{"dbname":"GENE3D","id":"G3DSA:6.10.140.1730","locations":[{"end":63,"start":1}],"match_end":63,"match_start":1},{"dbname":"PANTHER","id":"PTHR12884","interpro_description":"Large ribosomal subunit protein eL29","interpro_id":"IPR002673","interpro_name":"Ribosomal_eL29","locations":[{"end":59,"start":1}],"match_end":59,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L29"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":31,"start":1}],"match_end":31,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":26,"start":1}],"match_end":26,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":478351,"start_pos":478103,"strand":"reverse"},"name":"rpl29","ortholog_annotations":[{"gene_uniquename":"SJAG_03127","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10331","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03127","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03127","ortholog_taxonid":4932,"ortholog_uniquename":"YFR032C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03127","ortholog_taxonid":4932,"ortholog_uniquename":"YFR032C-A","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L29","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005730","GO:0002181","GO:0005198","GO:0005829","GO:0005634","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0022625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03127.1"],"transcripts_by_uniquename":{"SJAG_03127.1":null},"uniprot_identifier":"B6K3E3","uniquename":"SJAG_03127"}


id: SJAG_03128
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111284],"is_not":false,"summary":null,"term":"GO:0006335"},{"annotations":[111285],"is_not":false,"summary":null,"term":"GO:0034728"},{"annotations":[111286],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[111287],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[111288],"is_not":false,"summary":null,"term":"GO:0031509"},{"annotations":[111289],"is_not":false,"summary":null,"term":"GO:0140673"}],"cellular_component":[{"annotations":[66087],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[111278],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111279],"is_not":false,"summary":null,"term":"GO:0000791"},{"annotations":[77459],"is_not":false,"summary":null,"term":"GO:0035101"},{"annotations":[111281],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[66086],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[111292],"is_not":false,"summary":null,"term":"GO:0000511"},{"annotations":[77457],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[77458],"is_not":false,"summary":null,"term":"GO:0031491"}]},"dbxrefs":["InterPro:IPR038167","EnsemblGenomes-Gn:SJAG_03128","InterPro:IPR024954","InterPro:IPR000969","InterPro:IPR013719","InterPro:IPR035417","UniProtKB/TrEMBL:B6K3E4","GOA:B6K3E4","EnsemblGenomes-Tr:EEB08001","InterPro:IPR011993"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":507,"start":461}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"smi1","uniquename":"SJAG_03123"},{"name":"pha2","uniquename":"SJAG_03124"},{"name":"naf1","uniquename":"SJAG_03125"},{"name":"dis2","uniquename":"SJAG_03126"},{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"}],"genes_by_uniquename":{"HGNC:11327":null,"SJAG_03128":null,"SPBC609.05":null,"YML069W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SSRP1 PH domain","id":"PF21103","interpro_description":"FACT complex subunit SSRP1-like, first PH domain","interpro_id":"IPR048993","interpro_name":"SSRP1-like_PH1","locations":[{"end":342,"start":213}],"match_end":342,"match_start":213,"name":"PH1_SSRP1-like"},{"dbname":"PFAM","description":"Structure-specific recognition protein (SSRP1)","id":"PF03531","interpro_description":"SSRP1, dimerization domain","interpro_id":"IPR024954","interpro_name":"SSRP1_DD","locations":[{"end":176,"start":105}],"match_end":176,"match_start":105,"name":"SSrecog"},{"dbname":"PFAM","description":"Histone chaperone Rttp106-like, middle domain","id":"PF08512","interpro_description":"Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain","interpro_id":"IPR013719","interpro_name":"RTT106/SPT16-like_middle_dom","locations":[{"end":446,"start":356}],"match_end":446,"match_start":356,"name":"Rttp106-like_middle"},{"dbname":"PFAM","description":"POB3-like N-terminal PH domain","id":"PF17292","interpro_description":"FACT complex subunit SSRP1/POB3, N-terminal PH domain","interpro_id":"IPR035417","interpro_name":"SSRP1/POB3_N","locations":[{"end":98,"start":7}],"match_end":98,"match_start":7,"name":"POB3_N"},{"dbname":"CDD","description":"PH2_SSRP1-like","id":"cd13231","locations":[{"end":447,"start":348}],"match_end":447,"match_start":348,"name":"PH2_SSRP1-like"},{"dbname":"CDD","description":"PH1_SSRP1-like","id":"cd13230","locations":[{"end":346,"start":210}],"match_end":346,"match_start":210,"name":"PH1_SSRP1-like"},{"dbname":"SMART","id":"SM01287","interpro_description":"Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain","interpro_id":"IPR013719","interpro_name":"RTT106/SPT16-like_middle_dom","locations":[{"end":447,"start":354}],"match_end":447,"match_start":354,"name":"Rtt106_2"},{"dbname":"PRINTS","description":"Structure-specific recognition protein signature","id":"PR00887","interpro_description":"FACT complex subunit SSRP1/POB3","interpro_id":"IPR000969","interpro_name":"SSRP1/POB3","locations":[{"end":241,"start":225},{"end":263,"start":247},{"end":286,"start":270},{"end":348,"start":335},{"end":397,"start":362},{"end":440,"start":406}],"match_end":440,"match_start":225,"name":"SSRCOGNITION"},{"dbname":"FUNFAM","description":"Fact complex subunit ssrp1","id":"G3DSA:2.30.29.150:FF:000001","locations":[{"end":344,"start":205}],"match_end":344,"match_start":205},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":446,"start":210}],"match_end":446,"match_start":210,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":93,"start":1},{"end":456,"start":345}],"match_end":456,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:2.30.29.150","locations":[{"end":344,"start":205}],"match_end":344,"match_start":205},{"dbname":"GENE3D","id":"G3DSA:2.30.29.220","interpro_description":"SSRP1 domain superfamily","interpro_id":"IPR038167","interpro_name":"SSRP1_sf","locations":[{"end":183,"start":94}],"match_end":183,"match_start":94},{"dbname":"PANTHER","id":"PTHR45849","interpro_description":"RTT106/SSRP1 Histone Chaperone/FACT Complex","interpro_id":"IPR050454","interpro_name":"RTT106/SSRP1_HistChap/FACT","locations":[{"end":507,"start":6}],"match_end":507,"match_start":6,"name":"FACT COMPLEX SUBUNIT SSRP1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":507,"start":461}],"match_end":507,"match_start":461,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":495,"start":462}],"match_end":495,"match_start":462,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":480521,"start_pos":478867,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":189,"start":174}},{"range":{"end":492,"start":459}}],"name":"pob3","ortholog_annotations":[{"gene_uniquename":"SJAG_03128","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11327","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03128","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC609.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03128","ortholog_taxonid":4932,"ortholog_uniquename":"YML069W","reference_uniquename":"PMID:29761456"}],"product":"histone H2A-H2B chaperone, FACT complex subunit Pob3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0042393","GO:0031491","GO:0003677"],"not-binding":["GO:0000511"]}},"subset_termids":["GO:0006325","GO:0140104","GO:0005654","GO:0005829","GO:0006351","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000511":null,"GO:0000791":null,"GO:0003677":null,"GO:0005829":null,"GO:0006335":null,"GO:0030466":null,"GO:0031491":null,"GO:0031508":null,"GO:0031509":null,"GO:0034728":null,"GO:0035101":null,"GO:0042393":null,"GO:0043596":null,"GO:0140445":null,"GO:0140673":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03128.1"],"transcripts_by_uniquename":{"SJAG_03128.1":null},"uniprot_identifier":"B6K3E4","uniquename":"SJAG_03128"}


id: SJAG_03129
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[68025],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[68024],"is_not":false,"summary":null,"term":"GO:0004672"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03129","InterPro:IPR000719","EnsemblGenomes-Tr:EEB08002","InterPro:IPR011009","UniProtKB/TrEMBL:B6K3E5","GOA:B6K3E5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pha2","uniquename":"SJAG_03124"},{"name":"naf1","uniquename":"SJAG_03125"},{"name":"dis2","uniquename":"SJAG_03126"},{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"}],"genes_by_uniquename":{"SJAG_03129":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":285,"start":43}],"match_end":285,"match_start":43,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":285,"start":55}],"match_end":285,"match_start":55,"name":"serkin_6"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":289,"start":60}],"match_end":289,"match_start":60,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":290,"start":90}],"match_end":290,"match_start":90,"name":"Transferase(Phosphotransferase) domain 1"}],"location":{"chromosome_name":"supercont5.2","end_pos":483538,"start_pos":481375,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":255,"start":244}}],"product":"serine/threonine protein kinase","references_by_uniquename":{"GO_REF:0000002":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004672"]}},"subset_termids":["GO:0140096","GO:0004672","GO:0016301"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004672":null,"GO:0005524":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03129.1"],"transcripts_by_uniquename":{"SJAG_03129.1":null},"uniprot_identifier":"B6K3E5","uniquename":"SJAG_03129"}


id: SJAG_03130
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70618],"is_not":false,"summary":null,"term":"GO:0045717"}],"cellular_component":[{"annotations":[70620],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[111275],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111276],"is_not":false,"summary":null,"term":"GO:0005634"}]},"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":607,"start":582}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"naf1","uniquename":"SJAG_03125"},{"name":"dis2","uniquename":"SJAG_03126"},{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"}],"genes_by_uniquename":{"HGNC:30002":null,"SJAG_03130":null,"SPBC609.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":76,"start":42},{"end":121,"start":89},{"end":173,"start":137},{"end":688,"start":650},{"end":729,"start":694}],"match_end":729,"match_start":42,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":77,"start":63}],"match_end":77,"match_start":63,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":77,"start":44}],"match_end":77,"match_start":44,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":85,"start":44}],"match_end":85,"match_start":44,"name":"WD_REPEATS_2"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":76,"start":37},{"end":122,"start":80},{"end":174,"start":135},{"end":291,"start":242},{"end":688,"start":646},{"end":730,"start":691}],"match_end":730,"match_start":37,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":300,"start":34},{"end":729,"start":653}],"match_end":729,"match_start":34,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":362,"start":30},{"end":754,"start":641}],"match_end":754,"match_start":30},{"dbname":"PANTHER","id":"PTHR15574","interpro_description":"DDB1- and CUL4-associated factor 8-like","interpro_id":"IPR045151","interpro_name":"DCAF8","locations":[{"end":788,"start":8}],"match_end":788,"match_start":8,"name":"WD REPEAT DOMAIN-CONTAINING FAMILY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":607,"start":582}],"match_end":607,"match_start":582,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":607,"start":593}],"match_end":607,"match_start":593,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":486165,"start_pos":483592,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":188,"start":177}},{"range":{"end":608,"start":592}}],"name":"iqw1","ortholog_annotations":[{"gene_uniquename":"SJAG_03130","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30002","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03130","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC609.03","reference_uniquename":"PMID:21511999"}],"product":"WD repeat protein, Iqw1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006629","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0045717":null,"GO:0080008":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03130.1"],"transcripts_by_uniquename":{"SJAG_03130.1":null},"uniprot_identifier":"B6K3E6","uniquename":"SJAG_03130"}


id: SJAG_03131
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111272],"is_not":false,"summary":null,"term":"GO:0046854"}],"cellular_component":[{"annotations":[111269],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[78641],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111271],"is_not":false,"summary":null,"term":"GO:0005770"}],"molecular_function":[{"annotations":[78642],"is_not":false,"summary":null,"term":"GO:0016314"}],"mondo":[{"annotations":[85787],"is_not":false,"summary":null,"term":"MONDO:0008021"},{"annotations":[87254],"is_not":false,"summary":null,"term":"MONDO:0011789"},{"annotations":[87255],"is_not":false,"summary":null,"term":"MONDO:0013092"},{"annotations":[86791],"is_not":false,"summary":null,"term":"MONDO:0011537"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03131","InterPro:IPR016130","InterPro:IPR000340","EnsemblGenomes-Tr:EEB08004","UniProtKB/TrEMBL:B6K3E7","InterPro:IPR029023","GOA:B6K3E7","InterPro:IPR029021"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dis2","uniquename":"SJAG_03126"},{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"}],"genes_by_uniquename":{"HGNC:12023":null,"HGNC:17299":null,"HGNC:9588":null,"HGNC:9589":null,"SJAG_03131":null,"SPBC609.02":null,"YNL128W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Polymorphic toxin system, DSP-PTPase phosphatase","id":"PF22785","locations":[{"end":148,"start":72}],"match_end":148,"match_start":72,"name":"Tc-R-P"},{"dbname":"CDD","description":"PTP_PTEN-like","id":"cd14497","locations":[{"end":186,"start":29}],"match_end":186,"match_start":29,"name":"PTP_PTEN-like"},{"dbname":"PROSITE_PATTERNS","description":"Tyrosine specific protein phosphatases active site.","id":"PS00383","interpro_description":"Protein-tyrosine phosphatase, active site","interpro_id":"IPR016130","interpro_name":"Tyr_Pase_AS","locations":[{"end":138,"start":128}],"match_end":138,"match_start":128,"name":"TYR_PHOSPHATASE_1"},{"dbname":"PROSITE_PROFILES","description":"Phosphatase tensin-type domain profile.","id":"PS51181","interpro_description":"Tensin-type phosphatase domain","interpro_id":"IPR029023","interpro_name":"Tensin_phosphatase","locations":[{"end":190,"start":19}],"match_end":190,"match_start":19,"name":"PPASE_TENSIN"},{"dbname":"PROSITE_PROFILES","description":"Tyrosine specific protein phosphatases domain profile.","id":"PS50056","interpro_description":"Tyrosine-specific protein phosphatases domain","interpro_id":"IPR000387","interpro_name":"Tyr_Pase_dom","locations":[{"end":178,"start":108}],"match_end":178,"match_start":108,"name":"TYR_PHOSPHATASE_2"},{"dbname":"SUPERFAMILY","id":"SSF52799","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":185,"start":27}],"match_end":185,"match_start":27,"name":"(Phosphotyrosine protein) phosphatases II"},{"dbname":"GENE3D","id":"G3DSA:3.90.190.10","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":191,"start":3}],"match_end":191,"match_start":3,"name":"Protein tyrosine phosphatase superfamily"},{"dbname":"PANTHER","id":"PTHR12305","interpro_description":"Dual-specificity lipid and protein phosphatase","interpro_id":"IPR051281","interpro_name":"Dual-spec_lipid-protein_phosph","locations":[{"end":319,"start":6}],"match_end":319,"match_start":6,"name":"PHOSPHATASE WITH HOMOLOGY TO TENSIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":487349,"start_pos":486339,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":201,"start":183}}],"name":"ptn1","ortholog_annotations":[{"gene_uniquename":"SJAG_03131","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12023","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17299","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9588","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9589","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC609.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":4932,"ortholog_uniquename":"YNL128W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03131","ortholog_taxonid":4932,"ortholog_uniquename":"YNL128W","reference_uniquename":"PMID:26896847"}],"product":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatase Ptn1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016314"]}},"subset_termids":["GO:0005768","GO:0016788","MONDO:0000426","GO:0005829","GO:0006629","GO:0031410","MONDO:0005093"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005770":null,"GO:0005829":null,"GO:0016314":null,"GO:0032153":null,"GO:0046854":null,"MONDO:0008021":null,"MONDO:0011537":null,"MONDO:0011789":null,"MONDO:0013092":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03131.1"],"transcripts_by_uniquename":{"SJAG_03131.1":null},"uniprot_identifier":"B6K3E7","uniquename":"SJAG_03131"}


id: SJAG_03132
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111266],"is_not":false,"summary":null,"term":"GO:0000956"}],"cellular_component":[{"annotations":[111264],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[69665],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[69664],"is_not":false,"summary":null,"term":"GO:0000175"},{"annotations":[57021],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[85158],"is_not":false,"summary":null,"term":"MONDO:0009965"}]},"dbxrefs":["InterPro:IPR012340","UniProtKB/TrEMBL:B6K3E8","EnsemblGenomes-Tr:EEB08005","GOA:B6K3E8","InterPro:IPR041093","InterPro:IPR041505","InterPro:IPR001900","EnsemblGenomes-Gn:SJAG_03132"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":21,"start":1}},{"range":{"end":115,"start":73}},{"range":{"end":175,"start":127}},{"range":{"end":249,"start":224}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl29","uniquename":"SJAG_03127"},{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"}],"genes_by_uniquename":{"HGNC:28648":null,"SJAG_03132":null,"SPBC609.01":null,"YDR293C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DIS3-like exonuclease 2 C terminal","id":"PF17877","interpro_description":"DIS3-like exonuclease 2-like, C-terminal","interpro_id":"IPR041093","interpro_name":"Dis3l2-like_C","locations":[{"end":1042,"start":961}],"match_end":1042,"match_start":961,"name":"Dis3l2_C_term"},{"dbname":"PFAM","description":"RNB domain","id":"PF00773","interpro_description":"Ribonuclease II/R","interpro_id":"IPR001900","interpro_name":"RNase_II/R","locations":[{"end":908,"start":594}],"match_end":908,"match_start":594,"name":"RNB"},{"dbname":"PFAM","description":"Dis3-like cold-shock domain 2 (CSD2)","id":"PF17849","interpro_description":"Dis3-like cold-shock domain 2","interpro_id":"IPR041505","interpro_name":"Dis3_CSD2","locations":[{"end":564,"start":490}],"match_end":564,"match_start":490,"name":"OB_Dis3"},{"dbname":"SMART","id":"SM00955","interpro_description":"Ribonuclease II/R","interpro_id":"IPR001900","interpro_name":"RNase_II/R","locations":[{"end":912,"start":594}],"match_end":912,"match_start":594,"name":"RNB_2"},{"dbname":"FUNFAM","description":"Cell wall biogenesis protein","id":"G3DSA:2.40.50.700:FF:000002","locations":[{"end":552,"start":471}],"match_end":552,"match_start":471},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":448,"start":279},{"end":823,"start":520},{"end":954,"start":853}],"match_end":954,"match_start":279,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":1032,"start":963}],"match_end":1032,"match_start":963},{"dbname":"GENE3D","id":"G3DSA:2.40.50.690","locations":[{"end":371,"start":272}],"match_end":371,"match_start":272},{"dbname":"GENE3D","id":"G3DSA:2.40.50.700","locations":[{"end":552,"start":472}],"match_end":552,"match_start":472},{"dbname":"PANTHER","id":"PTHR23355","interpro_description":"RNR Ribonuclease","interpro_id":"IPR050180","interpro_name":"RNR_Ribonuclease","locations":[{"end":1083,"start":24}],"match_end":1083,"match_start":24,"name":"RIBONUCLEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":21,"start":1},{"end":115,"start":73},{"end":175,"start":127},{"end":249,"start":224}],"match_end":249,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":115,"start":104}],"match_end":115,"match_start":104,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":17,"start":1},{"end":169,"start":155},{"end":249,"start":231}],"match_end":249,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":491441,"start_pos":487842,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":114,"start":94}},{"range":{"end":201,"start":183}},{"range":{"end":227,"start":221}},{"range":{"end":366,"start":351}},{"range":{"end":384,"start":371}},{"range":{"end":735,"start":725}},{"range":{"end":982,"start":971}},{"range":{"end":1052,"start":1041}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03132","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03132","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC609.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03132","ortholog_taxonid":4932,"ortholog_uniquename":"YDR293C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03132","ortholog_taxonid":4932,"ortholog_uniquename":"YDR293C","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0000175"]}},"subset_termids":["GO:0005829","GO:0016788","GO:0140098","GO:0004527","GO:0016071","GO:0000932"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000175":null,"GO:0000932":null,"GO:0000956":null,"GO:0003723":null,"GO:0005829":null,"MONDO:0009965":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03132.1"],"transcripts_by_uniquename":{"SJAG_03132.1":null},"uniprot_identifier":"B6K3E8","uniquename":"SJAG_03132"}


id: SJAG_03133
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78241],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[78240],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[118823],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[78239],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR038097","InterPro:IPR000509","EnsemblGenomes-Tr:EEB08006","EnsemblGenomes-Gn:SJAG_03133","UniProtKB/TrEMBL:B6K3E9","GOA:B6K3E9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":34,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pob3","uniquename":"SJAG_03128"},{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"}],"genes_by_uniquename":{"HGNC:13631":null,"SJAG_03133":null,"SPBC405.07":null,"SPCC970.05":null,"YMR194W":null,"YPL249C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L36e","id":"PF01158","interpro_description":"Large ribosomal subunit protein eL36","interpro_id":"IPR000509","interpro_name":"Ribosomal_eL36","locations":[{"end":96,"start":4}],"match_end":96,"match_start":4,"name":"Ribosomal_L36e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L36e signature.","id":"PS01190","interpro_description":"Large ribosomal subunit protein eL36","interpro_id":"IPR000509","interpro_name":"Ribosomal_eL36","locations":[{"end":60,"start":50}],"match_end":60,"match_start":50,"name":"RIBOSOMAL_L36E"},{"dbname":"FUNFAM","description":"60S ribosomal protein L36","id":"G3DSA:1.10.10.1760:FF:000003","locations":[{"end":99,"start":1}],"match_end":99,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:1.10.10.1760","interpro_description":"Large ribosomal subunit protein eL36 domain superfamily","interpro_id":"IPR038097","interpro_name":"Ribosomal_eL36_sf","locations":[{"end":99,"start":1}],"match_end":99,"match_start":1,"name":"60S ribosomal protein L36"},{"dbname":"PANTHER","id":"PTHR10114","interpro_description":"Large ribosomal subunit protein eL36","interpro_id":"IPR000509","interpro_name":"Ribosomal_eL36","locations":[{"end":98,"start":4}],"match_end":98,"match_start":4,"name":"60S RIBOSOMAL PROTEIN L36"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":34,"start":1}],"match_end":34,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":492620,"start_pos":492218,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":79,"start":64}}],"name":"rpl36b","ortholog_annotations":[{"gene_uniquename":"SJAG_03133","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13631","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13631","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC970.05","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4932,"ortholog_uniquename":"YMR194W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4932,"ortholog_uniquename":"YMR194W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4932,"ortholog_uniquename":"YPL249C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03133","ortholog_taxonid":4932,"ortholog_uniquename":"YPL249C-A","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L36","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0022626","GO:0005829","GO:0030684","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03133.1"],"transcripts_by_uniquename":{"SJAG_03133.1":null},"uniprot_identifier":"B6K3E9","uniquename":"SJAG_03133"}


id: SJAG_03134
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03134","EnsemblGenomes-Tr:EEB08007","UniProtKB/TrEMBL:B6K3F0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03129"},{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"}],"genes_by_uniquename":{"SJAG_03134":null,"YML020W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR47349","locations":[{"end":493,"start":37}],"match_end":493,"match_start":37,"name":"CHROMOSOME 8, WHOLE GENOME SHOTGUN SEQUENCE"}],"location":{"chromosome_name":"supercont5.2","end_pos":494802,"start_pos":493212,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":286,"start":276}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03134","ortholog_taxonid":4932,"ortholog_uniquename":"YML020W","reference_uniquename":"PMID:26896847"}],"product":"fungal conserved protein YML020W protein ortholog, PTHR47349 family","references_by_uniquename":{"PMID:26896847":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03134.1"],"transcripts_by_uniquename":{"SJAG_03134.1":null},"uniprot_identifier":"B6K3F0","uniquename":"SJAG_03134"}


id: SJAG_03135
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77928],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[110294],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[110295],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[66658],"is_not":false,"summary":null,"term":"GO:0030544"},{"annotations":[66660],"is_not":false,"summary":null,"term":"GO:0051082"},{"annotations":[66661],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001623","GOA:B6K3F1","InterPro:IPR002939","InterPro:IPR008971","InterPro:IPR018253","EnsemblGenomes-Tr:EEB08008","InterPro:IPR001305","EnsemblGenomes-Gn:SJAG_03135","InterPro:IPR036410","InterPro:IPR036869","UniProtKB/TrEMBL:B6K3F1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"iqw1","uniquename":"SJAG_03130"},{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"}],"genes_by_uniquename":{"SJAG_03135":null,"SPBC405.06":null,"YLR090W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DnaJ central domain","id":"PF00684","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":215,"start":148}],"match_end":215,"match_start":148,"name":"DnaJ_CXXCXGXG"},{"dbname":"PFAM","description":"DnaJ C terminal domain","id":"PF01556","interpro_description":"Chaperone DnaJ, C-terminal","interpro_id":"IPR002939","interpro_name":"DnaJ_C","locations":[{"end":147,"start":123},{"end":345,"start":216}],"match_end":345,"match_start":123,"name":"DnaJ_C"},{"dbname":"PFAM","description":"DnaJ domain","id":"PF00226","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":70,"start":7}],"match_end":70,"match_start":7,"name":"DnaJ"},{"dbname":"CDD","description":"DnaJ_C","id":"cd10747","locations":[{"end":345,"start":216}],"match_end":345,"match_start":216,"name":"DnaJ_C"},{"dbname":"CDD","description":"DnaJ_zf","id":"cd10719","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":215,"start":148}],"match_end":215,"match_start":148,"name":"DnaJ_zf"},{"dbname":"CDD","description":"DnaJ","id":"cd06257","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":62,"start":6}],"match_end":62,"match_start":6,"name":"DnaJ"},{"dbname":"PROSITE_PATTERNS","description":"Nt-dnaJ domain signature.","id":"PS00636","interpro_description":"DnaJ domain, conserved site","interpro_id":"IPR018253","interpro_name":"DnaJ_domain_CS","locations":[{"end":69,"start":50}],"match_end":69,"match_start":50,"name":"DNAJ_1"},{"dbname":"PROSITE_PROFILES","description":"dnaJ domain profile.","id":"PS50076","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":73,"start":6}],"match_end":73,"match_start":6,"name":"DNAJ_2"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger CR-type profile.","id":"PS51188","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain","interpro_id":"IPR001305","interpro_name":"HSP_DnaJ_Cys-rich_dom","locations":[{"end":220,"start":135}],"match_end":220,"match_start":135,"name":"ZF_CR"},{"dbname":"SMART","id":"SM00271","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":65,"start":5}],"match_end":65,"match_start":5,"name":"dnaj_3"},{"dbname":"PRINTS","description":"DnaJ domain signature","id":"PR00625","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":41,"start":8},{"end":84,"start":45}],"match_end":84,"match_start":8,"name":"JDOMAIN"},{"dbname":"FUNFAM","description":"DnaJ subfamily A member 2","id":"G3DSA:2.10.230.10:FF:000001","locations":[{"end":215,"start":148}],"match_end":215,"match_start":148},{"dbname":"FUNFAM","description":"DnaJ subfamily A member 2","id":"G3DSA:2.60.260.20:FF:000003","locations":[{"end":346,"start":263}],"match_end":346,"match_start":263},{"dbname":"SUPERFAMILY","id":"SSF49493","interpro_description":"HSP40/DnaJ peptide-binding","interpro_id":"IPR008971","interpro_name":"HSP40/DnaJ_pept-bd","locations":[{"end":139,"start":114},{"end":354,"start":192}],"match_end":354,"match_start":114,"name":"HSP40/DnaJ peptide-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF57938","interpro_description":"Heat shock protein DnaJ, cysteine-rich domain superfamily","interpro_id":"IPR036410","interpro_name":"HSP_DnaJ_Cys-rich_dom_sf","locations":[{"end":217,"start":145}],"match_end":217,"match_start":145,"name":"DnaJ/Hsp40 cysteine-rich domain"},{"dbname":"SUPERFAMILY","id":"SSF46565","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":105,"start":5}],"match_end":105,"match_start":5,"name":"Chaperone J-domain"},{"dbname":"GENE3D","id":"G3DSA:2.60.260.20","locations":[{"end":147,"start":118},{"end":256,"start":216},{"end":369,"start":262}],"match_end":369,"match_start":118},{"dbname":"GENE3D","id":"G3DSA:2.10.230.10","locations":[{"end":215,"start":148}],"match_end":215,"match_start":148},{"dbname":"GENE3D","id":"G3DSA:1.10.287.110","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":110,"start":3}],"match_end":110,"match_start":3,"name":"DnaJ domain"},{"dbname":"PANTHER","id":"PTHR43888","interpro_description":"DnaJ homolog subfamily A member 1/2-like","interpro_id":"IPR044713","interpro_name":"DNJA1/2-like","locations":[{"end":381,"start":4}],"match_end":381,"match_start":4,"name":"DNAJ-LIKE-2, ISOFORM A-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":496167,"start_pos":494908,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":106,"start":98}}],"name":"xdj1","ortholog_annotations":[{"gene_uniquename":"SJAG_03135","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03135","ortholog_taxonid":4932,"ortholog_uniquename":"YLR090W","reference_uniquename":"PMID:29761456"}],"product":"DNAJ protein Xdj1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030544","GO:0051082","GO:0008270"]}},"subset_termids":["GO:0005739","GO:0051082","GO:0005634","GO:0006457","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0008270":null,"GO:0030544":null,"GO:0042026":null,"GO:0051082":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03135.1"],"transcripts_by_uniquename":{"SJAG_03135.1":null},"uniprot_identifier":"B6K3F1","uniquename":"SJAG_03135"}


id: SJAG_03136
data:
  {"coiled_coil_coords":[{"range":{"end":98,"start":78}},{"range":{"end":151,"start":117}}],"cv_annotations":{"biological_process":[{"annotations":[110291],"is_not":false,"summary":null,"term":"GO:0016236"}],"cellular_component":[{"annotations":[110288],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110290],"is_not":false,"summary":null,"term":"GO:0034045"}],"molecular_function":[{"annotations":[110292],"is_not":false,"summary":null,"term":"GO:0019776"}],"mondo":[{"annotations":[87320],"is_not":false,"summary":null,"term":"MONDO:0012610"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08009","EnsemblGenomes-Gn:SJAG_03136","GOA:B6K3F2","UniProtKB/TrEMBL:B6K3F2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":73,"start":54}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptn1","uniquename":"SJAG_03131"},{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"}],"genes_by_uniquename":{"HGNC:21498":null,"HGNC:25464":null,"SJAG_03136":null,"SPBC405.05":null,"YMR159C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Autophagy protein 16 (ATG16)","id":"PF08614","interpro_description":"Autophagy-related protein 16 domain","interpro_id":"IPR013923","interpro_name":"Autophagy-rel_prot_16_dom","locations":[{"end":155,"start":5}],"match_end":155,"match_start":5,"name":"ATG16"},{"dbname":"COILS","id":"Coil","locations":[{"end":98,"start":78},{"end":151,"start":117}],"match_end":151,"match_start":78,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":73,"start":54}],"match_end":73,"match_start":54,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":497012,"start_pos":496539,"strand":"reverse"},"name":"atg16","ortholog_annotations":[{"gene_uniquename":"SJAG_03136","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21498","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03136","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25464","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03136","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03136","ortholog_taxonid":4932,"ortholog_uniquename":"YMR159C","reference_uniquename":"PMID:29761456"}],"product":"autophagy associated protein Atg16","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0019776"]}},"subset_termids":["GO:0000407","MONDO:0005046","GO:0005829","GO:0019787","MONDO:0004335","GO:0140096","GO:0016746","GO:0006914"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0016236":null,"GO:0019776":null,"GO:0034045":null,"MONDO:0012610":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03136.1"],"transcripts_by_uniquename":{"SJAG_03136.1":null},"uniprot_identifier":"B6K3F2","uniquename":"SJAG_03136"}


id: SJAG_03137
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110279],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[110280],"is_not":false,"summary":null,"term":"GO:0006896"},{"annotations":[110281],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[110282],"is_not":false,"summary":null,"term":"GO:0061191"},{"annotations":[110283],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[110276],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74649],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[74650],"is_not":false,"summary":null,"term":"GO:0005770"}],"molecular_function":[{"annotations":[62741],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[62742],"is_not":false,"summary":null,"term":"GO:0003924"}],"mondo":[{"annotations":[85293],"is_not":false,"summary":null,"term":"MONDO:0010949"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3F3","EnsemblGenomes-Tr:EEB08010","EnsemblGenomes-Gn:SJAG_03137","GOA:B6K3F3","InterPro:IPR001806","InterPro:IPR005225","InterPro:IPR027417"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03132"},{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"}],"genes_by_uniquename":{"HGNC:9788":null,"SJAG_03137":null,"SPBC405.04c":null,"YML001W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":174,"start":10}],"match_end":174,"match_start":10,"name":"Ras"},{"dbname":"CDD","description":"Rab7","id":"cd01862","locations":[{"end":181,"start":9}],"match_end":181,"match_start":9,"name":"Rab7"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":205,"start":4}],"match_end":205,"match_start":4,"name":"RAB"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Ras family profile.","id":"PS51421","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":205,"start":1}],"match_end":205,"match_start":1,"name":"RAS"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rho family profile.","id":"PS51420","locations":[{"end":175,"start":1}],"match_end":175,"match_start":1,"name":"RHO"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":178,"start":11}],"match_end":178,"match_start":11,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00173","locations":[{"end":178,"start":6}],"match_end":178,"match_start":6,"name":"ras_sub_4"},{"dbname":"SMART","id":"SM00175","locations":[{"end":178,"start":9}],"match_end":178,"match_start":9,"name":"rab_sub_5"},{"dbname":"SMART","id":"SM00176","locations":[{"end":196,"start":14}],"match_end":196,"match_start":14,"name":"ran_sub_2"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":30,"start":9},{"end":48,"start":32},{"end":72,"start":50},{"end":129,"start":116},{"end":175,"start":153}],"match_end":175,"match_start":9,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"Ras-related small GTPase","id":"G3DSA:3.40.50.300:FF:000086","locations":[{"end":192,"start":1}],"match_end":192,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":178,"start":5}],"match_end":178,"match_start":5,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":192,"start":1}],"match_end":192,"match_start":1},{"dbname":"PANTHER","id":"PTHR47981","locations":[{"end":184,"start":1}],"match_end":184,"match_start":1,"name":"RAB FAMILY"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":171,"start":10}],"match_end":171,"match_start":10,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.2","end_pos":498160,"start_pos":497427,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":9,"start":4}}],"name":"ypt7","ortholog_annotations":[{"gene_uniquename":"SJAG_03137","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03137","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03137","ortholog_taxonid":4932,"ortholog_uniquename":"YML001W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03137","ortholog_taxonid":4932,"ortholog_uniquename":"YML001W","reference_uniquename":"PMID:26896847"}],"product":"GTPase Ypt7","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924"]}},"subset_termids":["GO:0023052","GO:0003924","MONDO:0005244","GO:0016192","GO:0031410","GO:0005829","GO:0005768","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0003924":null,"GO:0005525":null,"GO:0005770":null,"GO:0005829":null,"GO:0006886":null,"GO:0006896":null,"GO:0006897":null,"GO:0023052":null,"GO:0061191":null,"MONDO:0010949":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03137.1"],"transcripts_by_uniquename":{"SJAG_03137.1":null},"uniprot_identifier":"B6K3F3","uniquename":"SJAG_03137"}


id: SJAG_03138
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":337,"start":23}}],"cv_annotations":{"biological_process":[{"annotations":[65836],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[110272],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[110273],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[65835],"is_not":false,"summary":null,"term":"GO:0022857"}],"sequence":[{"annotations":[80463],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03138","GOA:B6K3F4","EnsemblGenomes-Tr:EEB08011","InterPro:IPR009262","UniProtKB/TrEMBL:B6K3F4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl36b","uniquename":"SJAG_03133"},{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"}],"genes_by_uniquename":{"HGNC:23617":null,"SJAG_03138":null,"SPBC405.03c":null,"YDR438W":null,"YML018C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Solute carrier family 35","id":"PF06027","interpro_description":"Solute carrier family 35 member SLC35F1/F2/F6","interpro_id":"IPR009262","interpro_name":"SLC35_F1/F2/F6","locations":[{"end":331,"start":108}],"match_end":331,"match_start":108,"name":"SLC35F"},{"dbname":"SUPERFAMILY","id":"SSF103481","locations":[{"end":177,"start":101}],"match_end":177,"match_start":101,"name":"Multidrug resistance efflux transporter EmrE"},{"dbname":"PANTHER","id":"PTHR23051","locations":[{"end":334,"start":2}],"match_end":334,"match_start":2,"name":"SOLUTE CARRIER FAMILY 35, MEMBER F5"}],"location":{"chromosome_name":"supercont5.2","end_pos":500225,"start_pos":499212,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":23,"start":4}},{"range":{"end":236,"start":223}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03138","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23617","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03138","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03138","ortholog_taxonid":4932,"ortholog_uniquename":"YDR438W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03138","ortholog_taxonid":4932,"ortholog_uniquename":"YDR438W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03138","ortholog_taxonid":4932,"ortholog_uniquename":"YML018C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03138","ortholog_taxonid":4932,"ortholog_uniquename":"YML018C","reference_uniquename":"PMID:26896847"}],"product":"transmembrane transporter","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":22,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0022857"]}},"subset_termids":["GO:0055085","GO:0005794","GO:0022857","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005794":null,"GO:0022857":null,"GO:0055085":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":23,"start":5}},{"assigned_by":"TMHMM","range":{"end":57,"start":38}},{"assigned_by":"TMHMM","range":{"end":118,"start":101}},{"assigned_by":"TMHMM","range":{"end":150,"start":128}},{"assigned_by":"TMHMM","range":{"end":174,"start":155}},{"assigned_by":"TMHMM","range":{"end":210,"start":189}},{"assigned_by":"TMHMM","range":{"end":245,"start":223}},{"assigned_by":"TMHMM","range":{"end":300,"start":278}},{"assigned_by":"TMHMM","range":{"end":331,"start":312}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03138.1"],"transcripts_by_uniquename":{"SJAG_03138.1":null},"uniprot_identifier":"B6K3F4","uniquename":"SJAG_03138"}


id: SJAG_03139
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB08012","EnsemblGenomes-Gn:SJAG_03139","GOA:B6K3F5","UniProtKB/TrEMBL:B6K3F5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":41,"start":1}},{"range":{"end":123,"start":80}},{"range":{"end":301,"start":268}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03134"},{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"}],"genes_by_uniquename":{"SJAG_03139":null,"SPBC405.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":41,"start":1},{"end":123,"start":80},{"end":301,"start":268}],"match_end":301,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":103,"start":93},{"end":278,"start":268}],"match_end":278,"match_start":93,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":30,"start":15}],"match_end":30,"match_start":15,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":502366,"start_pos":501125,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":103,"start":91}},{"range":{"end":277,"start":241}},{"range":{"end":298,"start":291}},{"range":{"end":333,"start":318}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03139","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.02c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein, GPI anchored","references_by_uniquename":{"PMID:21511999":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":368,"start":346}},{"assigned_by":"TMHMM","range":{"end":408,"start":389}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03139.1"],"transcripts_by_uniquename":{"SJAG_03139.1":null},"uniprot_identifier":"B6K3F5","uniquename":"SJAG_03139"}


id: SJAG_03140
data:
  {"cv_annotations":{"biological_process":[{"annotations":[57982],"is_not":false,"summary":null,"term":"GO:0006189"},{"annotations":[70531],"is_not":false,"summary":null,"term":"GO:0046084"}],"cellular_component":[{"annotations":[70532],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[57975],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[57972],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[70529],"is_not":false,"summary":null,"term":"GO:0004637"},{"annotations":[70530],"is_not":false,"summary":null,"term":"GO:0004641"}]},"dbxrefs":["InterPro:IPR020561","InterPro:IPR037123","InterPro:IPR013815","InterPro:IPR020559","EnsemblGenomes-Tr:EEB08013","InterPro:IPR004733","InterPro:IPR016188","InterPro:IPR010918","InterPro:IPR011054","EnsemblGenomes-Gn:SJAG_03140","UniProtKB/TrEMBL:B6K3F6","InterPro:IPR036676","InterPro:IPR020562","InterPro:IPR020560","InterPro:IPR000115","GOA:B6K3F6","InterPro:IPR011761","InterPro:IPR036921","InterPro:IPR016185"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"xdj1","uniquename":"SJAG_03135"},{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"}],"genes_by_uniquename":{"HGNC:4163":null,"SJAG_03140":null,"SPBC405.01":null,"YGL234W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain","id":"PF01071","interpro_description":"Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain","interpro_id":"IPR020561","interpro_name":"PRibGlycinamid_synth_ATP-grasp","locations":[{"end":304,"start":110}],"match_end":304,"match_start":110,"name":"GARS_A"},{"dbname":"PFAM","description":"Phosphoribosylglycinamide synthetase, C domain","id":"PF02843","interpro_description":"Phosphoribosylglycinamide synthetase, C-domain","interpro_id":"IPR020560","interpro_name":"PRibGlycinamide_synth_C-dom","locations":[{"end":428,"start":340}],"match_end":428,"match_start":340,"name":"GARS_C"},{"dbname":"PFAM","description":"AIR synthase related protein, N-terminal domain","id":"PF00586","interpro_description":"PurM-like, N-terminal domain","interpro_id":"IPR016188","interpro_name":"PurM-like_N","locations":[{"end":598,"start":492}],"match_end":598,"match_start":492,"name":"AIRS"},{"dbname":"PFAM","description":"Phosphoribosylglycinamide synthetase, N domain","id":"PF02844","interpro_description":"Phosphoribosylglycinamide synthetase, N-terminal","interpro_id":"IPR020562","interpro_name":"PRibGlycinamide_synth_N","locations":[{"end":109,"start":6}],"match_end":109,"match_start":6,"name":"GARS_N"},{"dbname":"PFAM","description":"AIR synthase related protein, C-terminal domain","id":"PF02769","interpro_description":"PurM-like, C-terminal domain","interpro_id":"IPR010918","interpro_name":"PurM-like_C_dom","locations":[{"end":775,"start":611}],"match_end":775,"match_start":611,"name":"AIRS_C"},{"dbname":"CDD","description":"PurM","id":"cd02196","interpro_description":"Phosphoribosylformylglycinamidine cyclo-ligase","interpro_id":"IPR004733","interpro_name":"PurM_cligase","locations":[{"end":771,"start":473}],"match_end":771,"match_start":473,"name":"PurM"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoribosylglycinamide synthetase signature.","id":"PS00184","interpro_description":"Phosphoribosylglycinamide synthetase, conserved site","interpro_id":"IPR020559","interpro_name":"PRibGlycinamide_synth_CS","locations":[{"end":305,"start":298}],"match_end":305,"match_start":298,"name":"GARS"},{"dbname":"PROSITE_PROFILES","description":"ATP-grasp fold profile.","id":"PS50975","interpro_description":"ATP-grasp fold","interpro_id":"IPR011761","interpro_name":"ATP-grasp","locations":[{"end":324,"start":116}],"match_end":324,"match_start":116,"name":"ATP_GRASP"},{"dbname":"SMART","id":"SM01210","interpro_description":"Phosphoribosylglycinamide synthetase, C-domain","interpro_id":"IPR020560","interpro_name":"PRibGlycinamide_synth_C-dom","locations":[{"end":430,"start":338}],"match_end":430,"match_start":338,"name":"GARS_C_2"},{"dbname":"SMART","id":"SM01209","locations":[{"end":304,"start":110}],"match_end":304,"match_start":110,"name":"GARS_A_3"},{"dbname":"FUNFAM","description":"phosphoribosylamine--glycine ligase, chloroplastic-like","id":"G3DSA:3.30.1490.20:FF:000006","locations":[{"end":199,"start":128}],"match_end":199,"match_start":128},{"dbname":"FUNFAM","description":"Trifunctional purine biosynthetic protein adenosine-3","id":"G3DSA:3.30.470.20:FF:000018","locations":[{"end":336,"start":200}],"match_end":336,"match_start":200},{"dbname":"FUNFAM","description":"Trifunctional purine biosynthetic protein adenosine-3","id":"G3DSA:3.90.600.10:FF:000001","locations":[{"end":438,"start":338}],"match_end":438,"match_start":338},{"dbname":"FUNFAM","description":"Phosphoribosylformylglycinamidine cyclo-ligase","id":"G3DSA:3.30.1330.10:FF:000001","locations":[{"end":604,"start":439}],"match_end":604,"match_start":439},{"dbname":"FUNFAM","description":"Phosphoribosylamine--glycine ligase, chloroplastic","id":"G3DSA:3.40.50.20:FF:000006","locations":[{"end":102,"start":6}],"match_end":102,"match_start":6},{"dbname":"FUNFAM","description":"Trifunctional purine biosynthetic protein adenosine-3","id":"G3DSA:3.90.650.10:FF:000007","locations":[{"end":791,"start":605}],"match_end":791,"match_start":605},{"dbname":"SUPERFAMILY","id":"SSF52440","interpro_description":"Pre-ATP-grasp domain superfamily","interpro_id":"IPR016185","interpro_name":"PreATP-grasp_dom_sf","locations":[{"end":110,"start":5}],"match_end":110,"match_start":5,"name":"PreATP-grasp domain"},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":325,"start":111}],"match_end":325,"match_start":111,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"SUPERFAMILY","id":"SSF51246","interpro_description":"Rudiment single hybrid motif","interpro_id":"IPR011054","interpro_name":"Rudment_hybrid_motif","locations":[{"end":430,"start":337}],"match_end":430,"match_start":337,"name":"Rudiment single hybrid motif"},{"dbname":"SUPERFAMILY","id":"SSF56042","interpro_description":"PurM-like, C-terminal domain superfamily","interpro_id":"IPR036676","interpro_name":"PurM-like_C_sf","locations":[{"end":777,"start":609}],"match_end":777,"match_start":609,"name":"PurM C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF55326","interpro_description":"PurM-like, N-terminal domain superfamily","interpro_id":"IPR036921","interpro_name":"PurM-like_N_sf","locations":[{"end":603,"start":440}],"match_end":603,"match_start":440,"name":"PurM N-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.10","interpro_description":"PurM-like, N-terminal domain superfamily","interpro_id":"IPR036921","interpro_name":"PurM-like_N_sf","locations":[{"end":604,"start":441}],"match_end":604,"match_start":441},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.20","interpro_description":"ATP-grasp fold, subdomain 1","interpro_id":"IPR013815","interpro_name":"ATP_grasp_subdomain_1","locations":[{"end":198,"start":129}],"match_end":198,"match_start":129},{"dbname":"GENE3D","id":"G3DSA:3.40.50.20","locations":[{"end":102,"start":6}],"match_end":102,"match_start":6},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":337,"start":200}],"match_end":337,"match_start":200},{"dbname":"GENE3D","id":"G3DSA:3.90.650.10","interpro_description":"PurM-like, C-terminal domain superfamily","interpro_id":"IPR036676","interpro_name":"PurM-like_C_sf","locations":[{"end":787,"start":605}],"match_end":787,"match_start":605},{"dbname":"GENE3D","id":"G3DSA:3.90.600.10","interpro_description":"Phosphoribosylglycinamide synthetase, C-domain superfamily","interpro_id":"IPR037123","interpro_name":"PRibGlycinamide_synth_C_sf","locations":[{"end":440,"start":339}],"match_end":440,"match_start":339},{"dbname":"PANTHER","id":"PTHR10520","interpro_description":"Phosphoribosylformylglycinamidine cyclo-ligase","interpro_id":"IPR004733","interpro_name":"PurM_cligase","locations":[{"end":782,"start":93}],"match_end":782,"match_start":93,"name":"TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED"},{"dbname":"HAMAP","description":"Phosphoribosylamine--glycine ligase [purD].","id":"MF_00138","interpro_description":"Phosphoribosylglycinamide synthetase","interpro_id":"IPR000115","interpro_name":"PRibGlycinamide_synth","locations":[{"end":430,"start":5}],"match_end":430,"match_start":5,"name":"GARS"},{"dbname":"HAMAP","description":"Phosphoribosylformylglycinamidine cyclo-ligase [purM].","id":"MF_00741","interpro_description":"Phosphoribosylformylglycinamidine cyclo-ligase","interpro_id":"IPR004733","interpro_name":"PurM_cligase","locations":[{"end":785,"start":440}],"match_end":785,"match_start":440,"name":"AIRS"},{"dbname":"NCBIFAM","description":"phosphoribosylformylglycinamidine cyclo-ligase","id":"TIGR00878","interpro_description":"Phosphoribosylformylglycinamidine cyclo-ligase","interpro_id":"IPR004733","interpro_name":"PurM_cligase","locations":[{"end":771,"start":440}],"match_end":771,"match_start":440,"name":"purM"},{"dbname":"NCBIFAM","description":"phosphoribosylamine--glycine ligase","id":"TIGR00877","interpro_description":"Phosphoribosylglycinamide synthetase","interpro_id":"IPR000115","interpro_name":"PRibGlycinamide_synth","locations":[{"end":430,"start":6}],"match_end":430,"match_start":6,"name":"purD"}],"location":{"chromosome_name":"supercont5.2","end_pos":505136,"start_pos":502761,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":85,"start":71}},{"range":{"end":753,"start":741}}],"name":"ade1","ortholog_annotations":[{"gene_uniquename":"SJAG_03140","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4163","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03140","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC405.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03140","ortholog_taxonid":4932,"ortholog_uniquename":"YGL234W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03140","ortholog_taxonid":4932,"ortholog_uniquename":"YGL234W","reference_uniquename":"PMID:26896847"}],"product":"phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0046872"],"not-binding":["GO:0004641","GO:0004637"]}},"subset_termids":["GO:0016874","GO:0005829","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004637":null,"GO:0004641":null,"GO:0005524":null,"GO:0005829":null,"GO:0006189":null,"GO:0046084":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03140.1"],"transcripts_by_uniquename":{"SJAG_03140.1":null},"uniprot_identifier":"B6K3F6","uniquename":"SJAG_03140"}


id: SJAG_03141
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110682],"is_not":false,"summary":null,"term":"GO:0006555"},{"annotations":[110683],"is_not":false,"summary":null,"term":"GO:0009088"}],"cellular_component":[{"annotations":[110681],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[69560],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[69564],"is_not":false,"summary":null,"term":"GO:0004413"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3F7","InterPro:IPR000870","InterPro:IPR020568","InterPro:IPR014721","InterPro:IPR013750","EnsemblGenomes-Gn:SJAG_03141","GOA:B6K3F7","InterPro:IPR006204","InterPro:IPR036554","EnsemblGenomes-Tr:EEB08014","InterPro:IPR006203"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg16","uniquename":"SJAG_03136"},{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"}],"genes_by_uniquename":{"SJAG_03141":null,"SPBC4C3.03":null,"YHR025W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GHMP kinases N terminal domain","id":"PF00288","interpro_description":"GHMP kinase N-terminal domain","interpro_id":"IPR006204","interpro_name":"GHMP_kinase_N_dom","locations":[{"end":146,"start":62}],"match_end":146,"match_start":62,"name":"GHMP_kinases_N"},{"dbname":"PFAM","description":"GHMP kinases C terminal","id":"PF08544","interpro_description":"GHMP kinase, C-terminal domain","interpro_id":"IPR013750","interpro_name":"GHMP_kinase_C_dom","locations":[{"end":308,"start":252}],"match_end":308,"match_start":252,"name":"GHMP_kinases_C"},{"dbname":"PROSITE_PATTERNS","description":"GHMP kinases putative ATP-binding domain.","id":"PS00627","interpro_description":"GHMP kinase, ATP-binding, conserved site","interpro_id":"IPR006203","interpro_name":"GHMP_knse_ATP-bd_CS","locations":[{"end":103,"start":92}],"match_end":103,"match_start":92,"name":"GHMP_KINASES_ATP"},{"dbname":"PRINTS","description":"Homoserine kinase signature","id":"PR00958","locations":[{"end":26,"start":11},{"end":114,"start":99},{"end":146,"start":133},{"end":216,"start":199},{"end":298,"start":283}],"match_end":298,"match_start":11,"name":"HOMSERKINASE"},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":152,"start":4}],"match_end":152,"match_start":4,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"SUPERFAMILY","id":"SSF55060","interpro_description":"GHMP kinase, C-terminal domain superfamily","interpro_id":"IPR036554","interpro_name":"GHMP_kinase_C_sf","locations":[{"end":319,"start":195}],"match_end":319,"match_start":195,"name":"GHMP Kinase, C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.230.10","interpro_description":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_id":"IPR014721","interpro_name":"Ribsml_uS5_D2-typ_fold_subgr","locations":[{"end":173,"start":2}],"match_end":173,"match_start":2},{"dbname":"GENE3D","id":"G3DSA:3.30.70.890","interpro_description":"GHMP kinase, C-terminal domain superfamily","interpro_id":"IPR036554","interpro_name":"GHMP_kinase_C_sf","locations":[{"end":326,"start":190}],"match_end":326,"match_start":190},{"dbname":"PANTHER","id":"PTHR20861","locations":[{"end":338,"start":2}],"match_end":338,"match_start":2,"name":"HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE"},{"dbname":"PIRSF","id":"PIRSF000676","interpro_description":"Homoserine kinase","interpro_id":"IPR000870","interpro_name":"Homoserine_kinase","locations":[{"end":338,"start":1}],"match_end":338,"match_start":1,"name":"Homoser_kin"},{"dbname":"HAMAP","description":"Homoserine kinase [thrB].","id":"MF_00384","interpro_description":"Homoserine kinase","interpro_id":"IPR000870","interpro_name":"Homoserine_kinase","locations":[{"end":336,"start":4}],"match_end":336,"match_start":4,"name":"Homoser_kinase"},{"dbname":"NCBIFAM","description":"homoserine kinase","id":"TIGR00191","interpro_description":"Homoserine kinase","interpro_id":"IPR000870","interpro_name":"Homoserine_kinase","locations":[{"end":336,"start":4}],"match_end":336,"match_start":4,"name":"thrB"}],"location":{"chromosome_name":"supercont5.2","end_pos":506976,"start_pos":505957,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":107,"start":94}}],"name":"thr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03141","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03141","ortholog_taxonid":4932,"ortholog_uniquename":"YHR025W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03141","ortholog_taxonid":4932,"ortholog_uniquename":"YHR025W","reference_uniquename":"PMID:26896847"}],"product":"homoserine kinase Thr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004413"]}},"subset_termids":["GO:0016301","GO:0006520","GO:0006790"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004413":null,"GO:0005524":null,"GO:0005737":null,"GO:0006555":null,"GO:0009088":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03141.1"],"transcripts_by_uniquename":{"SJAG_03141.1":null},"uniprot_identifier":"B6K3F7","uniquename":"SJAG_03141"}


id: SJAG_03142
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110688],"is_not":false,"summary":null,"term":"GO:0006892"}],"cellular_component":[{"annotations":[110686],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110687],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[57031],"is_not":false,"summary":null,"term":"GO:0005085"},{"annotations":[110690],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR007515","InterPro:IPR011057","UniProtKB/TrEMBL:B6K3F8","GOA:B6K3F8","InterPro:IPR011323","EnsemblGenomes-Gn:SJAG_03142","EnsemblGenomes-Tr:EEB08015"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":59,"start":40}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ypt7","uniquename":"SJAG_03137"},{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"}],"genes_by_uniquename":{"HGNC:9797":null,"SJAG_03142":null,"SPBC4C3.04c":null,"YPR017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mss4 protein","id":"PF04421","interpro_description":"Mss4","interpro_id":"IPR007515","interpro_name":"Mss4","locations":[{"end":123,"start":14}],"match_end":123,"match_start":14,"name":"Mss4"},{"dbname":"PROSITE_PROFILES","description":"MSS4 domain profile.","id":"PS51796","interpro_description":"Mss4","interpro_id":"IPR007515","interpro_name":"Mss4","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"MSS4"},{"dbname":"SUPERFAMILY","id":"SSF51316","interpro_description":"Mss4-like superfamily","interpro_id":"IPR011057","interpro_name":"Mss4-like_sf","locations":[{"end":119,"start":3}],"match_end":119,"match_start":3,"name":"Mss4-like"},{"dbname":"GENE3D","id":"G3DSA:2.170.150.10","interpro_description":"Mss4/translationally controlled tumour-associated TCTP","interpro_id":"IPR011323","interpro_name":"Mss4/transl-control_tumour","locations":[{"end":123,"start":1}],"match_end":123,"match_start":1,"name":"Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A"},{"dbname":"PANTHER","id":"PTHR13276","interpro_description":"Mss4","interpro_id":"IPR007515","interpro_name":"Mss4","locations":[{"end":119,"start":6}],"match_end":119,"match_start":6,"name":"GUANINE NUCLEOTIDE EXCHANGE FACTOR MSS4"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":59,"start":40}],"match_end":59,"match_start":40,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":53,"start":43}],"match_end":53,"match_start":43,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":508201,"start_pos":507803,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":52,"start":39}}],"name":"dss4","ortholog_annotations":[{"gene_uniquename":"SJAG_03142","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9797","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03142","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03142","ortholog_taxonid":4932,"ortholog_uniquename":"YPR017C","reference_uniquename":"PMID:29761456"}],"product":"guanyl-nucleotide exchange factor, meiosis specific","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0005085"]}},"subset_termids":["GO:0016192","GO:0005829","GO:0005085","GO:0098772","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005085":null,"GO:0005829":null,"GO:0006892":null,"GO:0008270":null,"GO:0016020":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03142.1"],"transcripts_by_uniquename":{"SJAG_03142.1":null},"uniprot_identifier":"B6K3F8","uniquename":"SJAG_03142"}


id: SJAG_03143
data:
  {"alleles_by_uniquename":{"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[110737],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[110738],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[110734],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[110735],"is_not":false,"summary":null,"term":"GO:0097221"}],"molecular_function":[{"annotations":[110740],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[75691],"is_not":false,"summary":null,"term":"GO:0000978"}],"single_locus_phenotype":[{"annotations":[119328],"is_not":false,"summary":null,"term":"FYPO:0006557"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03143","EnsemblGenomes-Tr:EEB08016","GOA:B6K3F9","InterPro:IPR036388","UniProtKB/TrEMBL:B6K3F9","InterPro:IPR030456","InterPro:IPR001766","InterPro:IPR036390"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":359,"start":332}},{"range":{"end":420,"start":371}},{"range":{"end":630,"start":562}}],"feature_publications":[{"reference_uniquename":"PMID:22300943","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03138"},{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"}],"genes_by_uniquename":{"SJAG_03143":null,"SPBC4C3.12":null,"YCR065W":null},"genotypes_by_uniquename":{"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Forkhead domain","id":"PF00250","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":194,"start":109}],"match_end":194,"match_start":109,"name":"Forkhead"},{"dbname":"CDD","description":"FH_FOX","id":"cd00059","locations":[{"end":185,"start":111}],"match_end":185,"match_start":111,"name":"FH_FOX"},{"dbname":"PROSITE_PATTERNS","description":"Fork head domain signature 2.","id":"PS00658","interpro_description":"Fork head domain conserved site 2","interpro_id":"IPR030456","interpro_name":"TF_fork_head_CS_2","locations":[{"end":160,"start":154}],"match_end":160,"match_start":154,"name":"FORK_HEAD_2"},{"dbname":"PROSITE_PROFILES","description":"Fork head domain profile.","id":"PS50039","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":186,"start":110}],"match_end":186,"match_start":110,"name":"FORK_HEAD_3"},{"dbname":"SMART","id":"SM00339","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":198,"start":108}],"match_end":198,"match_start":108,"name":"forkneu4"},{"dbname":"PRINTS","description":"Fork head domain signature","id":"PR00053","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":123,"start":110},{"end":148,"start":131},{"end":171,"start":154}],"match_end":171,"match_start":110,"name":"FORKHEAD"},{"dbname":"FUNFAM","description":"Forkhead transcription factor (Sep1)","id":"G3DSA:1.10.10.10:FF:000260","locations":[{"end":201,"start":104}],"match_end":201,"match_start":104},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":197,"start":110}],"match_end":197,"match_start":110,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":199,"start":104}],"match_end":199,"match_start":104},{"dbname":"PANTHER","id":"PTHR45881","locations":[{"end":441,"start":44}],"match_end":441,"match_start":44,"name":"CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":359,"start":332},{"end":420,"start":371},{"end":630,"start":562}],"match_end":630,"match_start":332,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":420,"start":399}],"match_end":420,"match_start":399,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":359,"start":347},{"end":398,"start":388},{"end":609,"start":578}],"match_end":609,"match_start":347,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":511027,"start_pos":508934,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":90,"start":76}},{"range":{"end":235,"start":221}},{"range":{"end":274,"start":263}},{"range":{"end":381,"start":376}},{"range":{"end":422,"start":398}}],"name":"sep1","ortholog_annotations":[{"gene_uniquename":"SJAG_03143","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03143","ortholog_taxonid":4932,"ortholog_uniquename":"YCR065W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03143","ortholog_taxonid":4932,"ortholog_uniquename":"YCR065W","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding forkhead transcription factor Sep1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:22300943":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978"],"not-binding":["GO:0001228"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0006557"]}},"subset_termids":["GO:0003700","GO:0005694","FYPO:0001320","GO:0005634","GO:0006355","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYPO:0006557":null,"FYPO_EXT:0000002":null,"GO:0000122":null,"GO:0000785":null,"GO:0000978":null,"GO:0001228":null,"GO:0045944":null,"GO:0097221":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03143.1"],"transcripts_by_uniquename":{"SJAG_03143.1":null},"uniprot_identifier":"B6K3F9","uniquename":"SJAG_03143"}


id: SJAG_03144
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64007],"is_not":false,"summary":null,"term":"GO:0006390"},{"annotations":[64000],"is_not":false,"summary":null,"term":"GO:0042793"},{"annotations":[64005],"is_not":false,"summary":null,"term":"GO:0006366"},{"annotations":[64006],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[64002],"is_not":false,"summary":null,"term":"GO:0001059"},{"annotations":[64003],"is_not":false,"summary":null,"term":"GO:0001060"},{"annotations":[110694],"is_not":false,"summary":null,"term":"GO:0006362"}],"cellular_component":[{"annotations":[110691],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[64001],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[75697],"is_not":false,"summary":null,"term":"GO:0005736"}],"molecular_function":[{"annotations":[63997],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[63998],"is_not":false,"summary":null,"term":"GO:0003899"}],"mondo":[{"annotations":[85086],"is_not":false,"summary":null,"term":"MONDO:0014651"},{"annotations":[86060],"is_not":false,"summary":null,"term":"MONDO:0958018"}]},"dbxrefs":["InterPro:IPR015699","InterPro:IPR007080","GOA:B6K3G0","InterPro:IPR007083","InterPro:IPR006592","UniProtKB/TrEMBL:B6K3G0","EnsemblGenomes-Gn:SJAG_03144","InterPro:IPR000722","InterPro:IPR007066","InterPro:IPR007081","InterPro:IPR042102","InterPro:IPR038120","EnsemblGenomes-Tr:EEB08017"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":168,"start":144}},{"range":{"end":301,"start":253}},{"range":{"end":1425,"start":1349}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03139"},{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"}],"genes_by_uniquename":{"HGNC:17264":null,"SJAG_03144":null,"SPBC4C3.05c":null,"YOR341W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerase Rpb1, domain 1","id":"PF04997","interpro_description":"RNA polymerase Rpb1, domain 1","interpro_id":"IPR007080","interpro_name":"RNA_pol_Rpb1_1","locations":[{"end":455,"start":9}],"match_end":455,"match_start":9,"name":"RNA_pol_Rpb1_1"},{"dbname":"PFAM","description":"RNA polymerase Rpb1, domain 2","id":"PF00623","interpro_description":"RNA polymerase, alpha subunit","interpro_id":"IPR000722","interpro_name":"RNA_pol_asu","locations":[{"end":646,"start":459}],"match_end":646,"match_start":459,"name":"RNA_pol_Rpb1_2"},{"dbname":"PFAM","description":"RNA polymerase Rpb1, domain 3","id":"PF04983","interpro_description":"RNA polymerase Rpb1, domain 3","interpro_id":"IPR007066","interpro_name":"RNA_pol_Rpb1_3","locations":[{"end":826,"start":650}],"match_end":826,"match_start":650,"name":"RNA_pol_Rpb1_3"},{"dbname":"PFAM","description":"RNA polymerase Rpb1, domain 4","id":"PF05000","interpro_description":"RNA polymerase Rpb1, domain 4","interpro_id":"IPR007083","interpro_name":"RNA_pol_Rpb1_4","locations":[{"end":973,"start":890}],"match_end":973,"match_start":890,"name":"RNA_pol_Rpb1_4"},{"dbname":"PFAM","description":"RNA polymerase Rpb1, domain 5","id":"PF04998","interpro_description":"RNA polymerase Rpb1, domain 5","interpro_id":"IPR007081","interpro_name":"RNA_pol_Rpb1_5","locations":[{"end":1601,"start":980}],"match_end":1601,"match_start":980,"name":"RNA_pol_Rpb1_5"},{"dbname":"CDD","description":"RNAP_I_RPA1_N","id":"cd01435","interpro_description":"DNA-directed RNA pol I, largest subunit, N-terminal domain","interpro_id":"IPR015699","interpro_name":"DNA-dir_RNA_pol1_lsu_N","locations":[{"end":1026,"start":15}],"match_end":1026,"match_start":15,"name":"RNAP_I_RPA1_N"},{"dbname":"CDD","description":"RNAP_I_Rpa1_C","id":"cd02735","interpro_description":"DNA-directed RNA pol I, largest subunit, C-terminal domain","interpro_id":"IPR047107","interpro_name":"DNA-dir_RNA_pol1_lsu_C","locations":[{"end":1650,"start":1160}],"match_end":1650,"match_start":1160,"name":"RNAP_I_Rpa1_C"},{"dbname":"SMART","id":"SM00663","interpro_description":"RNA polymerase, N-terminal","interpro_id":"IPR006592","interpro_name":"RNA_pol_N","locations":[{"end":675,"start":339}],"match_end":675,"match_start":339,"name":"rpolaneu7"},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase subunit","id":"G3DSA:3.30.1490.180:FF:000003","locations":[{"end":573,"start":492}],"match_end":573,"match_start":492},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase II subunit RPB1","id":"G3DSA:2.40.40.20:FF:000019","locations":[{"end":654,"start":551}],"match_end":654,"match_start":551},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase subunit","id":"G3DSA:4.10.860.120:FF:000006","locations":[{"end":129,"start":4}],"match_end":129,"match_start":4},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase subunit","id":"G3DSA:1.10.274.100:FF:000006","locations":[{"end":820,"start":655}],"match_end":820,"match_start":655},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase subunit","id":"G3DSA:1.10.357.120:FF:000002","locations":[{"end":1167,"start":1045}],"match_end":1167,"match_start":1045},{"dbname":"SUPERFAMILY","id":"SSF64484","locations":[{"end":130,"start":4},{"end":235,"start":182},{"end":1314,"start":290},{"end":1651,"start":1418}],"match_end":1651,"match_start":4,"name":"beta and beta-prime subunits of DNA dependent RNA-polymerase"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.2940","locations":[{"end":1018,"start":960}],"match_end":1018,"match_start":960},{"dbname":"GENE3D","id":"G3DSA:1.10.150.390","locations":[{"end":1646,"start":1603}],"match_end":1646,"match_start":1603},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.180","locations":[{"end":573,"start":492}],"match_end":573,"match_start":492,"name":"RNA polymerase ii"},{"dbname":"GENE3D","id":"G3DSA:2.40.40.20","locations":[{"end":491,"start":450},{"end":654,"start":574}],"match_end":654,"match_start":450},{"dbname":"GENE3D","id":"G3DSA:3.30.70.2850","locations":[{"end":1393,"start":1248},{"end":1490,"start":1434}],"match_end":1490,"match_start":1248},{"dbname":"GENE3D","id":"G3DSA:4.10.860.120","interpro_description":"RNA polymerase Rpb1, clamp domain superfamily","interpro_id":"IPR044893","interpro_name":"RNA_pol_Rpb1_clamp_domain","locations":[{"end":132,"start":2}],"match_end":132,"match_start":2,"name":"RNA polymerase II, clamp domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.132.30","interpro_description":"RNA polymerase Rpb1, funnel domain superfamily","interpro_id":"IPR038120","interpro_name":"Rpb1_funnel_sf","locations":[{"end":958,"start":859}],"match_end":958,"match_start":859},{"dbname":"GENE3D","id":"G3DSA:1.10.274.100","interpro_description":"RNA polymerase Rpb1, domain 3 superfamily","interpro_id":"IPR042102","interpro_name":"RNA_pol_Rpb1_3_sf","locations":[{"end":820,"start":655}],"match_end":820,"match_start":655,"name":"RNA polymerase Rpb1, domain 3"},{"dbname":"GENE3D","id":"G3DSA:1.10.357.120","locations":[{"end":1166,"start":1045}],"match_end":1166,"match_start":1045},{"dbname":"PANTHER","id":"PTHR19376","interpro_description":"DNA-directed RNA polymerase, subunit beta-prime","interpro_id":"IPR045867","interpro_name":"DNA-dir_RpoC_beta_prime","locations":[{"end":1650,"start":15}],"match_end":1650,"match_start":15,"name":"DNA-DIRECTED RNA POLYMERASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":168,"start":144},{"end":301,"start":253},{"end":1425,"start":1349}],"match_end":1425,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":288,"start":266},{"end":1362,"start":1351},{"end":1409,"start":1400}],"match_end":1409,"match_start":266,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":265,"start":256},{"end":300,"start":289}],"match_end":300,"match_start":256,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":516619,"start_pos":511600,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":169,"start":142}},{"range":{"end":1258,"start":1246}},{"range":{"end":1298,"start":1285}},{"range":{"end":1362,"start":1344}}],"name":"nuc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03144","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17264","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03144","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03144","ortholog_taxonid":4932,"ortholog_uniquename":"YOR341W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03144","ortholog_taxonid":4932,"ortholog_uniquename":"YOR341W","reference_uniquename":"PMID:26896847"}],"product":"DNA-directed RNA polymerase I complex large subunit Nuc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0003899"]}},"subset_termids":["GO:0140053","GO:0140098","GO:0005829","GO:0005730","MONDO:0005497","GO:0006351","GO:0005739","MONDO:0005559","GO:0016779","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001059":null,"GO:0001060":null,"GO:0003677":null,"GO:0003899":null,"GO:0005736":null,"GO:0005739":null,"GO:0005829":null,"GO:0006362":null,"GO:0006366":null,"GO:0006383":null,"GO:0006390":null,"GO:0042793":null,"MONDO:0014651":null,"MONDO:0958018":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03144.1"],"transcripts_by_uniquename":{"SJAG_03144.1":null},"uniprot_identifier":"B6K3G0","uniquename":"SJAG_03144"}


id: SJAG_03145
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109079],"is_not":false,"summary":null,"term":"GO:0140861"},{"annotations":[109080],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[109081],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[109065],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[109066],"is_not":false,"summary":null,"term":"GO:0005884"},{"annotations":[109069],"is_not":false,"summary":null,"term":"GO:0031011"},{"annotations":[109070],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[109071],"is_not":false,"summary":null,"term":"GO:0120106"},{"annotations":[109072],"is_not":false,"summary":null,"term":"GO:0120105"},{"annotations":[109073],"is_not":false,"summary":null,"term":"GO:0120104"},{"annotations":[109074],"is_not":false,"summary":null,"term":"GO:0035267"},{"annotations":[109075],"is_not":false,"summary":null,"term":"GO:0048471"},{"annotations":[109076],"is_not":false,"summary":null,"term":"GO:0005628"},{"annotations":[109077],"is_not":false,"summary":null,"term":"GO:0000812"}],"molecular_function":[{"annotations":[109082],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[109083],"is_not":false,"summary":null,"term":"GO:0005200"}],"mondo":[{"annotations":[85023],"is_not":false,"summary":null,"term":"MONDO:0012730"},{"annotations":[85301],"is_not":false,"summary":null,"term":"MONDO:0013011"},{"annotations":[85820],"is_not":false,"summary":null,"term":"MONDO:0011480"},{"annotations":[86420],"is_not":false,"summary":null,"term":"MONDO:0013812"},{"annotations":[85252],"is_not":false,"summary":null,"term":"MONDO:0008070"},{"annotations":[86536],"is_not":false,"summary":null,"term":"MONDO:0859517"},{"annotations":[86539],"is_not":false,"summary":null,"term":"MONDO:0859523"},{"annotations":[86134],"is_not":false,"summary":null,"term":"MONDO:0013261"},{"annotations":[86174],"is_not":false,"summary":null,"term":"MONDO:0012799"},{"annotations":[86302],"is_not":false,"summary":null,"term":"MONDO:0030329"},{"annotations":[85918],"is_not":false,"summary":null,"term":"MONDO:0013542"},{"annotations":[86869],"is_not":false,"summary":null,"term":"MONDO:0013452"},{"annotations":[85761],"is_not":false,"summary":null,"term":"MONDO:0014800"},{"annotations":[86704],"is_not":false,"summary":null,"term":"MONDO:0020754"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08018","InterPro:IPR004001","UniProtKB/TrEMBL:B6K3G1","InterPro:IPR020902","InterPro:IPR004000","EnsemblGenomes-Gn:SJAG_03145","GOA:B6K3G1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ade1","uniquename":"SJAG_03140"},{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"}],"genes_by_uniquename":{"HGNC:129":null,"HGNC:130":null,"HGNC:143":null,"HGNC:144":null,"HGNC:145":null,"SJAG_03145":null,"SPBC32H8.12c":null,"YFL039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Actin","id":"PF00022","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":375,"start":3}],"match_end":375,"match_start":3,"name":"Actin"},{"dbname":"CDD","description":"NBD_sugar-kinase_HSP70_actin","id":"cd00012","locations":[{"end":181,"start":8}],"match_end":181,"match_start":8,"name":"NBD_sugar-kinase_HSP70_actin"},{"dbname":"PROSITE_PATTERNS","description":"Actins and actin-related proteins signature.","id":"PS01132","interpro_description":"Actin/actin-like conserved site","interpro_id":"IPR020902","interpro_name":"Actin/actin-like_CS","locations":[{"end":116,"start":104}],"match_end":116,"match_start":104,"name":"ACTINS_ACT_LIKE"},{"dbname":"PROSITE_PATTERNS","description":"Actins signature 2.","id":"PS00432","interpro_description":"Actin, conserved site","interpro_id":"IPR004001","interpro_name":"Actin_CS","locations":[{"end":364,"start":356}],"match_end":364,"match_start":356,"name":"ACTINS_2"},{"dbname":"PROSITE_PATTERNS","description":"Actins signature 1.","id":"PS00406","interpro_description":"Actin, conserved site","interpro_id":"IPR004001","interpro_name":"Actin_CS","locations":[{"end":63,"start":53}],"match_end":63,"match_start":53,"name":"ACTINS_1"},{"dbname":"SMART","id":"SM00268","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":375,"start":5}],"match_end":375,"match_start":5,"name":"actin_3"},{"dbname":"PRINTS","description":"Actin signature","id":"PR00190","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":35,"start":26},{"end":83,"start":49},{"end":128,"start":115},{"end":159,"start":140},{"end":252,"start":236}],"match_end":252,"match_start":26,"name":"ACTIN"},{"dbname":"FUNFAM","description":"Actin, alpha skeletal muscle","id":"G3DSA:3.30.420.40:FF:000291","locations":[{"end":166,"start":1}],"match_end":166,"match_start":1},{"dbname":"FUNFAM","description":"Putative actin-related protein 5","id":"G3DSA:3.30.420.40:FF:000058","locations":[{"end":367,"start":339}],"match_end":367,"match_start":339},{"dbname":"FUNFAM","description":"Actin, muscle","id":"G3DSA:3.90.640.10:FF:000001","locations":[{"end":271,"start":180}],"match_end":271,"match_start":180},{"dbname":"FUNFAM","description":"Actin, alpha skeletal muscle","id":"G3DSA:2.30.36.70:FF:000001","locations":[{"end":71,"start":34}],"match_end":71,"match_start":34},{"dbname":"FUNFAM","description":"Major actin","id":"G3DSA:3.30.420.40:FF:000404","locations":[{"end":338,"start":254}],"match_end":338,"match_start":254},{"dbname":"SUPERFAMILY","id":"SSF53067","interpro_description":"ATPase, nucleotide binding domain","interpro_id":"IPR043129","interpro_name":"ATPase_NBD","locations":[{"end":375,"start":4}],"match_end":375,"match_start":4,"name":"Actin-like ATPase domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.40","locations":[{"end":179,"start":8},{"end":369,"start":272}],"match_end":369,"match_start":8},{"dbname":"GENE3D","id":"G3DSA:3.90.640.10","locations":[{"end":271,"start":180}],"match_end":271,"match_start":180,"name":"Actin; Chain A, domain 4"},{"dbname":"PANTHER","id":"PTHR11937","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":369,"start":8}],"match_end":369,"match_start":8,"name":"ACTIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":518167,"start_pos":517040,"strand":"reverse"},"name":"act1","ortholog_annotations":[{"gene_uniquename":"SJAG_03145","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:129","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:130","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:143","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:144","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:145","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32H8.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03145","ortholog_taxonid":4932,"ortholog_uniquename":"YFL039C","reference_uniquename":"PMID:29761456"}],"product":"actin Act1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0005200"]}},"subset_termids":["MONDO:0004335","GO:0005938","GO:0030479","MONDO:0002320","MONDO:0005336","MONDO:0019497","MONDO:0000426","GO:0006351","GO:0005628","MONDO:0005267","GO:0070938","GO:0005198","GO:0005634","GO:0016192","GO:0005694","GO:0006325","GO:0015629","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000812":null,"GO:0005200":null,"GO:0005524":null,"GO:0005628":null,"GO:0005884":null,"GO:0006897":null,"GO:0030479":null,"GO:0031011":null,"GO:0035267":null,"GO:0043332":null,"GO:0045815":null,"GO:0048471":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:0140861":null,"MONDO:0008070":null,"MONDO:0011480":null,"MONDO:0012730":null,"MONDO:0012799":null,"MONDO:0013011":null,"MONDO:0013261":null,"MONDO:0013452":null,"MONDO:0013542":null,"MONDO:0013812":null,"MONDO:0014800":null,"MONDO:0020754":null,"MONDO:0030329":null,"MONDO:0859517":null,"MONDO:0859523":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03145.1"],"transcripts_by_uniquename":{"SJAG_03145.1":null},"uniprot_identifier":"B6K3G1","uniquename":"SJAG_03145"}


id: SJAG_03146
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110701],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[110702],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[110703],"is_not":false,"summary":null,"term":"GO:0032185"}],"cellular_component":[{"annotations":[110697],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[110698],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[110699],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[110700],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[110704],"is_not":false,"summary":null,"term":"GO:0140312"}],"mondo":[{"annotations":[85548],"is_not":false,"summary":null,"term":"MONDO:0030898"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03146","EnsemblGenomes-Tr:EEB08019","InterPro:IPR001060","InterPro:IPR018808","InterPro:IPR027267","UniProtKB/TrEMBL:B6K3G2","GOA:B6K3G2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":388,"start":242}},{"range":{"end":498,"start":418}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"thr1","uniquename":"SJAG_03141"},{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"}],"genes_by_uniquename":{"HGNC:25180":null,"HGNC:25412":null,"HGNC:29002":null,"SJAG_03146":null,"SPBC4C3.06":null,"YCR030C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Muniscin C-terminal mu homology domain","id":"PF10291","interpro_description":"Muniscin, C-terminal","interpro_id":"IPR018808","interpro_name":"Muniscin_C","locations":[{"end":743,"start":533}],"match_end":743,"match_start":533,"name":"muHD"},{"dbname":"PFAM","description":"Fes/CIP4, and EFC/F-BAR homology domain","id":"PF00611","interpro_description":"FCH domain","interpro_id":"IPR001060","interpro_name":"FCH_dom","locations":[{"end":94,"start":25}],"match_end":94,"match_start":25,"name":"FCH"},{"dbname":"CDD","description":"F-BAR_Syp1p_like","id":"cd07650","locations":[{"end":245,"start":17}],"match_end":245,"match_start":17,"name":"F-BAR_Syp1p_like"},{"dbname":"CDD","description":"AP_Syp1_MHD","id":"cd09264","interpro_description":"Syp1-like, mu-homology domain","interpro_id":"IPR049609","interpro_name":"Syp1-like_MHD","locations":[{"end":792,"start":532}],"match_end":792,"match_start":532,"name":"AP_Syp1_MHD"},{"dbname":"SMART","id":"SM00055","interpro_description":"FCH domain","interpro_id":"IPR001060","interpro_name":"FCH_dom","locations":[{"end":100,"start":15}],"match_end":100,"match_start":15,"name":"fch_2"},{"dbname":"SUPERFAMILY","id":"SSF103657","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":239,"start":16}],"match_end":239,"match_start":16,"name":"BAR/IMD domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.60","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":252,"start":3}],"match_end":252,"match_start":3,"name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"PANTHER","id":"PTHR23065","locations":[{"end":111,"start":25}],"match_end":111,"match_start":25,"name":"PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":388,"start":242},{"end":498,"start":418}],"match_end":498,"match_start":242,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":438,"start":421},{"end":493,"start":468}],"match_end":493,"match_start":421,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":257,"start":244},{"end":351,"start":338}],"match_end":351,"match_start":244,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":272,"start":261},{"end":379,"start":368},{"end":462,"start":451}],"match_end":462,"match_start":261,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":298,"start":276}],"match_end":298,"match_start":276,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":520878,"start_pos":518466,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":133,"start":118}},{"range":{"end":275,"start":257}},{"range":{"end":372,"start":356}},{"range":{"end":437,"start":420}},{"range":{"end":492,"start":467}}],"name":"syp1","ortholog_annotations":[{"gene_uniquename":"SJAG_03146","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25180","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03146","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25412","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03146","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29002","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03146","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03146","ortholog_taxonid":4932,"ortholog_uniquename":"YCR030C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03146","ortholog_taxonid":4932,"ortholog_uniquename":"YCR030C","reference_uniquename":"PMID:26896847"}],"product":"endocytic adaptor, F-BAR domain protein Syp1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140312"]}},"subset_termids":["MONDO:0005046","GO:0015629","GO:0005886","GO:0030479","GO:0005938","GO:0030036","GO:0031410","GO:0016192","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0005886":null,"GO:0030139":null,"GO:0030479":null,"GO:0032153":null,"GO:0032185":null,"GO:0072583":null,"GO:0140312":null,"MONDO:0030898":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03146.1"],"transcripts_by_uniquename":{"SJAG_03146.1":null},"uniprot_identifier":"B6K3G2","uniquename":"SJAG_03146"}


id: SJAG_03147
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62166],"is_not":false,"summary":null,"term":"GO:0001732"}],"cellular_component":[{"annotations":[110706],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[62164],"is_not":false,"summary":null,"term":"GO:0016282"},{"annotations":[62165],"is_not":false,"summary":null,"term":"GO:0033290"},{"annotations":[110710],"is_not":false,"summary":null,"term":"GO:0071540"},{"annotations":[74198],"is_not":false,"summary":null,"term":"GO:0071541"}],"molecular_function":[{"annotations":[110714],"is_not":false,"summary":null,"term":"GO:0101005"},{"annotations":[62156],"is_not":false,"summary":null,"term":"GO:0008237"},{"annotations":[74195],"is_not":false,"summary":null,"term":"GO:0003743"},{"annotations":[74196],"is_not":false,"summary":null,"term":"GO:0031369"}],"mondo":[{"annotations":[86231],"is_not":false,"summary":null,"term":"MONDO:0032662"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08020","EnsemblGenomes-Gn:SJAG_03147","InterPro:IPR027531","UniProtKB/TrEMBL:B6K3G3","GOA:B6K3G3","InterPro:IPR000555","InterPro:IPR024969","InterPro:IPR037518"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dss4","uniquename":"SJAG_03142"},{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"}],"genes_by_uniquename":{"HGNC:3275":null,"SJAG_03147":null,"SPBC4C3.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Maintenance of mitochondrial structure and function","id":"PF13012","interpro_description":"EIF3F/CSN6-like, C-terminal","interpro_id":"IPR024969","interpro_name":"EIF3F/CSN6-like_C","locations":[{"end":298,"start":189}],"match_end":298,"match_start":189,"name":"MitMem_reg"},{"dbname":"PFAM","description":"JAB1/Mov34/MPN/PAD-1 ubiquitin protease","id":"PF01398","interpro_description":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_id":"IPR000555","interpro_name":"JAMM/MPN+_dom","locations":[{"end":124,"start":22}],"match_end":124,"match_start":22,"name":"JAB"},{"dbname":"CDD","description":"MPN_eIF3f","id":"cd08064","interpro_description":"Eukaryotic translation initiation factor 3 subunit F","interpro_id":"IPR027531","interpro_name":"eIF3f","locations":[{"end":298,"start":23}],"match_end":298,"match_start":23,"name":"MPN_eIF3f"},{"dbname":"PROSITE_PROFILES","description":"MPN domain profile.","id":"PS50249","interpro_description":"MPN domain","interpro_id":"IPR037518","interpro_name":"MPN","locations":[{"end":165,"start":23}],"match_end":165,"match_start":23,"name":"MPN"},{"dbname":"SMART","id":"SM00232","interpro_description":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_id":"IPR000555","interpro_name":"JAMM/MPN+_dom","locations":[{"end":164,"start":22}],"match_end":164,"match_start":22,"name":"pad1_6"},{"dbname":"GENE3D","id":"G3DSA:3.40.140.10","locations":[{"end":210,"start":16}],"match_end":210,"match_start":16,"name":"Cytidine Deaminase, domain 2"},{"dbname":"PANTHER","id":"PTHR10540","locations":[{"end":299,"start":17}],"match_end":299,"match_start":17,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED"},{"dbname":"HAMAP","description":"Eukaryotic translation initiation factor 3 subunit F [EIF3F].","id":"MF_03005","interpro_description":"Eukaryotic translation initiation factor 3 subunit F","interpro_id":"IPR027531","interpro_name":"eIF3f","locations":[{"end":301,"start":21}],"match_end":301,"match_start":21,"name":"eIF3f"}],"location":{"chromosome_name":"supercont5.2","end_pos":522409,"start_pos":521501,"strand":"forward"},"name":"tif306","ortholog_annotations":[{"gene_uniquename":"SJAG_03147","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3275","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03147","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.07","reference_uniquename":"PMID:21511999"}],"product":"translation initiation factor eIF3f","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031369"],"not-binding":["GO:0003743","GO:0101005","GO:0008237"]}},"subset_termids":["GO:0005829","MONDO:0006025","GO:0140096","GO:0002181","GO:0008233","MONDO:0005066","GO:0065003","MONDO:0037792"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001732":null,"GO:0003743":null,"GO:0005829":null,"GO:0008237":null,"GO:0016282":null,"GO:0031369":null,"GO:0033290":null,"GO:0071540":null,"GO:0071541":null,"GO:0101005":null,"MONDO:0032662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03147.1"],"transcripts_by_uniquename":{"SJAG_03147.1":null},"uniprot_identifier":"B6K3G3","uniquename":"SJAG_03147"}


id: SJAG_03148
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":160,"start":19}}],"cv_annotations":{"sequence":[{"annotations":[80415],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03148","EnsemblGenomes-Tr:EEB08021","UniProtKB/TrEMBL:B6K3G4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sep1","uniquename":"SJAG_03143"},{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"}],"genes_by_uniquename":{"SJAG_03148":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":524391,"start_pos":523909,"strand":"forward"},"product":"Schizosaccharomyces japonicus specific protein with predicted signal peptide","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03148.1"],"transcripts_by_uniquename":{"SJAG_03148.1":null},"uniprot_identifier":"B6K3G4","uniquename":"SJAG_03148"}


id: SJAG_03149
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110720],"is_not":false,"summary":null,"term":"GO:0006487"},{"annotations":[110721],"is_not":false,"summary":null,"term":"GO:0006493"}],"cellular_component":[{"annotations":[110718],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[110719],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[110722],"is_not":false,"summary":null,"term":"GO:0001962"}],"mondo":[{"annotations":[87177],"is_not":false,"summary":null,"term":"MONDO:0013291"},{"annotations":[86691],"is_not":false,"summary":null,"term":"MONDO:0014526"}]},"dbxrefs":["InterPro:IPR029044","UniProtKB/TrEMBL:B6K3G5","EnsemblGenomes-Gn:SJAG_03149","GOA:B6K3G5","EnsemblGenomes-Tr:EEB08022"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nuc1","uniquename":"SJAG_03144"},{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"}],"genes_by_uniquename":{"HGNC:4699":null,"HGNC:4700":null,"HGNC:4701":null,"SJAG_03149":null,"SPBC4C3.08":null,"YOR320C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":198,"start":89},{"end":373,"start":263}],"match_end":373,"match_start":89,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":196,"start":64},{"end":371,"start":241}],"match_end":371,"match_start":64,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR11183","interpro_description":"GNT1/Glycosyltransferase 8","interpro_id":"IPR050587","interpro_name":"GNT1/Glycosyltrans_8","locations":[{"end":367,"start":64}],"match_end":367,"match_start":64,"name":"GLYCOGENIN SUBFAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.2","end_pos":526491,"start_pos":525346,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":38,"start":23}}],"name":"otg2","ortholog_annotations":[{"gene_uniquename":"SJAG_03149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4700","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4701","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03149","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03149","ortholog_taxonid":4932,"ortholog_uniquename":"YOR320C","reference_uniquename":"PMID:29761456"}],"product":"alpha-1,3-galactosyltransferase Otg2","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0001962"]}},"subset_termids":["GO:0016757","GO:0006486","GO:0005794","GO:0005783","MONDO:0005336","MONDO:0005066","MONDO:0037792"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001962":null,"GO:0005783":null,"GO:0005794":null,"GO:0006487":null,"GO:0006493":null,"MONDO:0013291":null,"MONDO:0014526":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":43,"start":21}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03149.1"],"transcripts_by_uniquename":{"SJAG_03149.1":null},"uniprot_identifier":"B6K3G5","uniquename":"SJAG_03149"}


id: SJAG_03150
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110726],"is_not":false,"summary":null,"term":"GO:0006487"},{"annotations":[110727],"is_not":false,"summary":null,"term":"GO:0006493"}],"cellular_component":[{"annotations":[110723],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110724],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[110725],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[110728],"is_not":false,"summary":null,"term":"GO:0001962"}],"mondo":[{"annotations":[87176],"is_not":false,"summary":null,"term":"MONDO:0013291"},{"annotations":[86690],"is_not":false,"summary":null,"term":"MONDO:0014526"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08023","InterPro:IPR029044","UniProtKB/TrEMBL:B6K3G6","EnsemblGenomes-Gn:SJAG_03150","GOA:B6K3G6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"act1","uniquename":"SJAG_03145"},{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"}],"genes_by_uniquename":{"HGNC:4699":null,"HGNC:4700":null,"HGNC:4701":null,"SJAG_03150":null,"SPAC5H10.12c":null,"SPBC4C3.09":null,"YOR320C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":216,"start":89},{"end":371,"start":261}],"match_end":371,"match_start":89,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":228,"start":72},{"end":367,"start":264}],"match_end":367,"match_start":72,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR11183","interpro_description":"GNT1/Glycosyltransferase 8","interpro_id":"IPR050587","interpro_name":"GNT1/Glycosyltrans_8","locations":[{"end":364,"start":69}],"match_end":364,"match_start":69,"name":"GLYCOGENIN SUBFAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.2","end_pos":528157,"start_pos":527033,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":27,"start":16}},{"range":{"end":87,"start":72}}],"name":"otg3","ortholog_annotations":[{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4700","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4700","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4701","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4701","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC5H10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.09","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":4932,"ortholog_uniquename":"YOR320C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03150","ortholog_taxonid":4932,"ortholog_uniquename":"YOR320C","reference_uniquename":"PMID:29761456"}],"product":"alpha-1,3-galactosyltransferase Otg3","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0001962"]}},"subset_termids":["GO:0005829","MONDO:0037792","GO:0006486","GO:0005634","GO:0005794","GO:0016757","MONDO:0005336","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001962":null,"GO:0005634":null,"GO:0005794":null,"GO:0005829":null,"GO:0006487":null,"GO:0006493":null,"MONDO:0013291":null,"MONDO:0014526":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":36,"start":17}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03150.1"],"transcripts_by_uniquename":{"SJAG_03150.1":null},"uniprot_identifier":"B6K3G6","uniquename":"SJAG_03150"}


id: SJAG_03151
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":25,"start":25}}],"cv_annotations":{"biological_process":[{"annotations":[110732],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[110729],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110730],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[57000],"is_not":false,"summary":null,"term":"GO:0019774"}],"molecular_function":[{"annotations":[56997],"is_not":false,"summary":null,"term":"GO:0004298"}],"mondo":[{"annotations":[85391],"is_not":false,"summary":null,"term":"MONDO:0054699"}]},"dbxrefs":["GOA:B6K3G7","InterPro:IPR000243","InterPro:IPR029055","UniProtKB/TrEMBL:B6K3G7","InterPro:IPR001353","EnsemblGenomes-Gn:SJAG_03151","InterPro:IPR037559","InterPro:IPR016050","EnsemblGenomes-Tr:EEB08024","InterPro:IPR023333"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"syp1","uniquename":"SJAG_03146"},{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"}],"genes_by_uniquename":{"HGNC:9543":null,"HGNC:9546":null,"SJAG_03151":null,"SPBC4C3.10c":null,"YJL001W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Proteasome subunit","id":"PF00227","interpro_description":"Proteasome, subunit alpha/beta","interpro_id":"IPR001353","interpro_name":"Proteasome_sua/b","locations":[{"end":202,"start":22}],"match_end":202,"match_start":22,"name":"Proteasome"},{"dbname":"CDD","description":"proteasome_beta_type_6","id":"cd03762","locations":[{"end":212,"start":25}],"match_end":212,"match_start":25,"name":"proteasome_beta_type_6"},{"dbname":"PROSITE_PATTERNS","description":"Proteasome beta-type subunits signature.","id":"PS00854","interpro_description":"Proteasome beta-type subunit, conserved site","interpro_id":"IPR016050","interpro_name":"Proteasome_bsu_CS","locations":[{"end":75,"start":28}],"match_end":75,"match_start":28,"name":"PROTEASOME_BETA_1"},{"dbname":"PROSITE_PROFILES","description":"Proteasome beta-type subunit profile.","id":"PS51476","interpro_description":"Proteasome B-type subunit","interpro_id":"IPR023333","interpro_name":"Proteasome_suB-type","locations":[{"end":203,"start":24}],"match_end":203,"match_start":24,"name":"PROTEASOME_BETA_2"},{"dbname":"PRINTS","description":"Proteasome component signature","id":"PR00141","interpro_description":"Peptidase T1A, proteasome beta-subunit","interpro_id":"IPR000243","interpro_name":"Pept_T1A_subB","locations":[{"end":47,"start":32},{"end":175,"start":153},{"end":200,"start":189}],"match_end":200,"match_start":32,"name":"PROTEASOME"},{"dbname":"FUNFAM","description":"Proteasome subunit beta type-1","id":"G3DSA:3.60.20.10:FF:000010","locations":[{"end":221,"start":25}],"match_end":221,"match_start":25},{"dbname":"SUPERFAMILY","id":"SSF56235","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":210,"start":18}],"match_end":210,"match_start":18,"name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"GENE3D","id":"G3DSA:3.60.20.10","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":219,"start":16}],"match_end":219,"match_start":16,"name":"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"},{"dbname":"PANTHER","id":"PTHR32194","interpro_description":"Proteasome B-type subunit","interpro_id":"IPR023333","interpro_name":"Proteasome_suB-type","locations":[{"end":211,"start":22}],"match_end":211,"match_start":22,"name":"METALLOPROTEASE TLDD"}],"location":{"chromosome_name":"supercont5.2","end_pos":529364,"start_pos":528437,"strand":"reverse"},"name":"pre3","ortholog_annotations":[{"gene_uniquename":"SJAG_03151","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9543","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03151","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9546","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03151","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4C3.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03151","ortholog_taxonid":4932,"ortholog_uniquename":"YJL001W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03151","ortholog_taxonid":4932,"ortholog_uniquename":"YJL001W","reference_uniquename":"PMID:26896847"}],"product":"20S proteasome complex subunit beta 1 Pre3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004298"]}},"subset_termids":["GO:0008233","MONDO:0005046","GO:0030163","GO:0005829","GO:0005634","MONDO:0006025","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004298":null,"GO:0005634":null,"GO:0005829":null,"GO:0019774":null,"GO:0043161":null,"MONDO:0054699":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03151.1"],"transcripts_by_uniquename":{"SJAG_03151.1":null},"uniprot_identifier":"B6K3G7","uniquename":"SJAG_03151"}


id: SJAG_03152
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70981],"is_not":false,"summary":null,"term":"GO:0009090"},{"annotations":[111985],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[111986],"is_not":false,"summary":null,"term":"GO:0009088"}],"molecular_function":[{"annotations":[70982],"is_not":false,"summary":null,"term":"GO:0004412"},{"annotations":[111988],"is_not":false,"summary":null,"term":"GO:0070403"},{"annotations":[58505],"is_not":false,"summary":null,"term":"GO:0050661"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08025","InterPro:IPR036291","EnsemblGenomes-Gn:SJAG_03152","InterPro:IPR005106","InterPro:IPR019811","UniProtKB/TrEMBL:B6K3G8","GOA:B6K3G8","InterPro:IPR001342"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif306","uniquename":"SJAG_03147"},{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"}],"genes_by_uniquename":{"SJAG_03152":null,"SPBC776.03":null,"YJR139C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Homoserine dehydrogenase","id":"PF00742","interpro_description":"Homoserine dehydrogenase, catalytic","interpro_id":"IPR001342","interpro_name":"HDH_cat","locations":[{"end":437,"start":233}],"match_end":437,"match_start":233,"name":"Homoserine_dh"},{"dbname":"PFAM","description":"Homoserine dehydrogenase, NAD binding domain","id":"PF03447","interpro_description":"Aspartate/homoserine dehydrogenase, NAD-binding","interpro_id":"IPR005106","interpro_name":"Asp/hSer_DH_NAD-bd","locations":[{"end":223,"start":89}],"match_end":223,"match_start":89,"name":"NAD_binding_3"},{"dbname":"PROSITE_PATTERNS","description":"Homoserine dehydrogenase signature.","id":"PS01042","interpro_description":"Homoserine dehydrogenase, conserved site","interpro_id":"IPR019811","interpro_name":"HDH_CS","locations":[{"end":306,"start":284}],"match_end":306,"match_start":284,"name":"HOMOSER_DHGENASE"},{"dbname":"FUNFAM","description":"Bifunctional aspartokinase/homoserine dehydrogenase","id":"G3DSA:3.30.360.10:FF:000006","locations":[{"end":421,"start":244}],"match_end":421,"match_start":244},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":255,"start":81}],"match_end":255,"match_start":81,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF55347","locations":[{"end":424,"start":233}],"match_end":424,"match_start":233,"name":"Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":243,"start":83},{"end":439,"start":422}],"match_end":439,"match_start":83},{"dbname":"GENE3D","id":"G3DSA:3.30.360.10","locations":[{"end":421,"start":244}],"match_end":421,"match_start":244,"name":"Dihydrodipicolinate Reductase; domain 2"},{"dbname":"PANTHER","id":"PTHR43070","interpro_description":"Bifunctional aspartokinase/homoserine dehydrogenase, homoserine dehydrogenase domain","interpro_id":"IPR011147","interpro_name":"Bifunc_Aspkin/hSer_DH","locations":[{"end":445,"start":75}],"match_end":445,"match_start":75}],"location":{"chromosome_name":"supercont5.2","end_pos":533960,"start_pos":532438,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":43,"start":31}},{"range":{"end":386,"start":373}},{"range":{"end":431,"start":416}}],"name":"hom6","ortholog_annotations":[{"gene_uniquename":"SJAG_03152","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03152","ortholog_taxonid":4932,"ortholog_uniquename":"YJR139C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03152","ortholog_taxonid":4932,"ortholog_uniquename":"YJR139C","reference_uniquename":"PMID:26896847"}],"product":"homoserine dehydrogenase Hom6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0050661","GO:0070403"],"not-binding":["GO:0004412"]}},"subset_termids":["GO:0016491","GO:0006790","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004412":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0050661":null,"GO:0070403":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":434,"start":412}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03152.1"],"transcripts_by_uniquename":{"SJAG_03152.1":null},"uniprot_identifier":"B6K3G8","uniquename":"SJAG_03152"}


id: SJAG_03153
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75487],"is_not":false,"summary":null,"term":"GO:0090110"},{"annotations":[111995],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[63743],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[75486],"is_not":false,"summary":null,"term":"GO:0030127"},{"annotations":[111991],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75485],"is_not":false,"summary":null,"term":"GO:0070971"},{"annotations":[111993],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75484],"is_not":false,"summary":null,"term":"GO:0005096"},{"annotations":[63742],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[85420],"is_not":false,"summary":null,"term":"MONDO:0009134"},{"annotations":[85763],"is_not":false,"summary":null,"term":"MONDO:0014802"},{"annotations":[86931],"is_not":false,"summary":null,"term":"MONDO:0011911"}]},"dbxrefs":["InterPro:IPR006896","InterPro:IPR036175","InterPro:IPR036174","EnsemblGenomes-Tr:EEB08026","EnsemblGenomes-Gn:SJAG_03153","UniProtKB/TrEMBL:B6K3G9","GOA:B6K3G9","InterPro:IPR006900","InterPro:IPR012990","InterPro:IPR036465","InterPro:IPR029006","InterPro:IPR037364","InterPro:IPR037550","InterPro:IPR006895","InterPro:IPR036180","InterPro:IPR007123"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03148"},{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"}],"genes_by_uniquename":{"HGNC:10701":null,"HGNC:10702":null,"SJAG_03153":null,"SPBC776.04":null,"YPR181C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec23/Sec24 zinc finger","id":"PF04810","interpro_description":"Zinc finger, Sec23/Sec24-type","interpro_id":"IPR006895","interpro_name":"Znf_Sec23_Sec24","locations":[{"end":92,"start":53}],"match_end":92,"match_start":53,"name":"zf-Sec23_Sec24"},{"dbname":"PFAM","description":"Sec23/Sec24 trunk domain","id":"PF04811","interpro_description":"Sec23/Sec24, trunk domain","interpro_id":"IPR006896","interpro_name":"Sec23/24_trunk_dom","locations":[{"end":390,"start":121}],"match_end":390,"match_start":121,"name":"Sec23_trunk"},{"dbname":"PFAM","description":"Sec23/Sec24 helical domain","id":"PF04815","interpro_description":"Sec23/Sec24, helical domain","interpro_id":"IPR006900","interpro_name":"Sec23/24_helical_dom","locations":[{"end":614,"start":516}],"match_end":614,"match_start":516,"name":"Sec23_helical"},{"dbname":"PFAM","description":"Gelsolin repeat","id":"PF00626","interpro_description":"Gelsolin-like domain","interpro_id":"IPR007123","interpro_name":"Gelsolin-like_dom","locations":[{"end":717,"start":628}],"match_end":717,"match_start":628,"name":"Gelsolin"},{"dbname":"PFAM","description":"Sec23/Sec24 beta-sandwich domain","id":"PF08033","interpro_description":"Sec23/Sec24 beta-sandwich","interpro_id":"IPR012990","interpro_name":"Sec23_24_beta_S","locations":[{"end":504,"start":401}],"match_end":504,"match_start":401,"name":"Sec23_BS"},{"dbname":"CDD","description":"Sec23_C","id":"cd11287","interpro_description":"Sec23, C-terminal","interpro_id":"IPR037550","interpro_name":"Sec23_C","locations":[{"end":729,"start":608}],"match_end":729,"match_start":608,"name":"Sec23_C"},{"dbname":"FUNFAM","description":"Protein transport protein SEC23","id":"G3DSA:1.20.120.730:FF:000005","locations":[{"end":643,"start":513}],"match_end":643,"match_start":513},{"dbname":"FUNFAM","description":"Protein transport protein SEC23","id":"G3DSA:3.40.20.10:FF:000006","locations":[{"end":723,"start":618}],"match_end":723,"match_start":618},{"dbname":"FUNFAM","description":"Protein transport protein SEC23","id":"G3DSA:3.40.50.410:FF:000008","locations":[{"end":400,"start":122}],"match_end":400,"match_start":122},{"dbname":"FUNFAM","description":"Protein transport protein SEC23","id":"G3DSA:2.30.30.380:FF:000001","locations":[{"end":110,"start":50}],"match_end":110,"match_start":50},{"dbname":"SUPERFAMILY","id":"SSF53300","interpro_description":"von Willebrand factor A-like domain superfamily","interpro_id":"IPR036465","interpro_name":"vWFA_dom_sf","locations":[{"end":391,"start":122}],"match_end":391,"match_start":122,"name":"vWA-like"},{"dbname":"SUPERFAMILY","id":"SSF81995","locations":[{"end":61,"start":2},{"end":515,"start":409}],"match_end":515,"match_start":2,"name":"beta-sandwich domain of Sec23/24"},{"dbname":"SUPERFAMILY","id":"SSF81811","interpro_description":"Sec23/Sec24 helical domain superfamily","interpro_id":"IPR036175","interpro_name":"Sec23/24_helical_dom_sf","locations":[{"end":618,"start":516}],"match_end":618,"match_start":516,"name":"Helical domain of Sec23/24"},{"dbname":"SUPERFAMILY","id":"SSF82919","interpro_description":"Zinc finger, Sec23/Sec24-type superfamily","interpro_id":"IPR036174","interpro_name":"Znf_Sec23_Sec24_sf","locations":[{"end":118,"start":45}],"match_end":118,"match_start":45,"name":"Zn-finger domain of Sec23/24"},{"dbname":"SUPERFAMILY","id":"SSF82754","interpro_description":"Gelsolin-like domain superfamily","interpro_id":"IPR036180","interpro_name":"Gelsolin-like_dom_sf","locations":[{"end":760,"start":619}],"match_end":760,"match_start":619,"name":"C-terminal, gelsolin-like domain of Sec23/24"},{"dbname":"GENE3D","id":"G3DSA:1.20.120.730","locations":[{"end":617,"start":513},{"end":758,"start":724}],"match_end":758,"match_start":513,"name":"Sec23/Sec24 helical domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.410","interpro_description":"von Willebrand factor A-like domain superfamily","interpro_id":"IPR036465","interpro_name":"vWFA_dom_sf","locations":[{"end":199,"start":122},{"end":400,"start":225}],"match_end":400,"match_start":122,"name":"von Willebrand factor, type A domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.20.10","interpro_description":"ADF-H/Gelsolin-like domain superfamily","interpro_id":"IPR029006","interpro_name":"ADF-H/Gelsolin-like_dom_sf","locations":[{"end":723,"start":618}],"match_end":723,"match_start":618,"name":"Severin"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1670","locations":[{"end":49,"start":6},{"end":121,"start":111},{"end":501,"start":401}],"match_end":501,"match_start":6},{"dbname":"GENE3D","id":"G3DSA:2.30.30.380","locations":[{"end":110,"start":50}],"match_end":110,"match_start":50},{"dbname":"PANTHER","id":"PTHR11141","interpro_description":"Protein transport protein Sec23","interpro_id":"IPR037364","interpro_name":"Sec23","locations":[{"end":760,"start":2}],"match_end":760,"match_start":2,"name":"PROTEIN TRANSPORT PROTEIN SEC23"}],"location":{"chromosome_name":"supercont5.2","end_pos":536993,"start_pos":534460,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":206,"start":192}}],"name":"sec2302","ortholog_annotations":[{"gene_uniquename":"SJAG_03153","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10701","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03153","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10702","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03153","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03153","ortholog_taxonid":4932,"ortholog_uniquename":"YPR181C","reference_uniquename":"PMID:29761456"}],"product":"COPII cargo receptor subunit Sec23b","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0005096"]}},"subset_termids":["GO:0016192","GO:0005634","MONDO:0002280","MONDO:0024322","GO:0031410","GO:0030163","GO:0098772","MONDO:0000426","MONDO:0005093","GO:0061024","GO:0005829","MONDO:0005066","MONDO:0005570","GO:0005783","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005634":null,"GO:0005829":null,"GO:0006886":null,"GO:0008270":null,"GO:0030127":null,"GO:0036503":null,"GO:0070971":null,"GO:0090110":null,"MONDO:0009134":null,"MONDO:0011911":null,"MONDO:0014802":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03153.1"],"transcripts_by_uniquename":{"SJAG_03153.1":null},"uniprot_identifier":"B6K3G9","uniquename":"SJAG_03153"}


id: SJAG_03154
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72329],"is_not":false,"summary":null,"term":"GO:0006656"}],"cellular_component":[{"annotations":[111999],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[112000],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[112001],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[112003],"is_not":false,"summary":null,"term":"GO:0106158"}]},"dbxrefs":["InterPro:IPR021261","EnsemblGenomes-Tr:EEB08027","GOA:B6K3H0","UniProtKB/TrEMBL:B6K3H0","EnsemblGenomes-Gn:SJAG_03154"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"otg2","uniquename":"SJAG_03149"},{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"}],"genes_by_uniquename":{"SJAG_03154":null,"SPBC776.05":null,"YGR149W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein of unknown function (DUF2838)","id":"PF10998","interpro_description":"Glycerophosphocholine acyltransferase 1","interpro_id":"IPR021261","interpro_name":"GPCAT","locations":[{"end":222,"start":112}],"match_end":222,"match_start":112,"name":"DUF2838"},{"dbname":"PANTHER","id":"PTHR31201","interpro_description":"Glycerophosphocholine acyltransferase 1","interpro_id":"IPR021261","interpro_name":"GPCAT","locations":[{"end":396,"start":57}],"match_end":396,"match_start":57,"name":"OS01G0585100 PROTEIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":538862,"start_pos":537333,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":152,"start":135}},{"range":{"end":240,"start":221}},{"range":{"end":361,"start":350}}],"name":"gpc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03154","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03154","ortholog_taxonid":4932,"ortholog_uniquename":"YGR149W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03154","ortholog_taxonid":4932,"ortholog_uniquename":"YGR149W","reference_uniquename":"PMID:26896847"}],"product":"glycerophosphocholine acyltransferase (GPCAT) Gpc1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0106158"]}},"subset_termids":["GO:0016746","GO:0006629","GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null,"GO:0006656":null,"GO:0016020":null,"GO:0106158":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":132,"start":114}},{"assigned_by":"TMHMM","range":{"end":156,"start":137}},{"assigned_by":"TMHMM","range":{"end":183,"start":161}},{"assigned_by":"TMHMM","range":{"end":207,"start":190}},{"assigned_by":"TMHMM","range":{"end":241,"start":222}},{"assigned_by":"TMHMM","range":{"end":284,"start":262}},{"assigned_by":"TMHMM","range":{"end":345,"start":323}},{"assigned_by":"TMHMM","range":{"end":374,"start":352}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03154.1"],"transcripts_by_uniquename":{"SJAG_03154.1":null},"uniprot_identifier":"B6K3H0","uniquename":"SJAG_03154"}


id: SJAG_03155
data:
  {"coiled_coil_coords":[{"range":{"end":149,"start":129}}],"cv_annotations":{"biological_process":[{"annotations":[112006],"is_not":false,"summary":null,"term":"GO:0061668"}],"cellular_component":[{"annotations":[62886],"is_not":false,"summary":null,"term":"GO:0005759"}],"mondo":[{"annotations":[85183],"is_not":false,"summary":null,"term":"MONDO:0054677"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08028","InterPro:IPR003428","InterPro:IPR036561","UniProtKB/TrEMBL:B6K3H1","EnsemblGenomes-Gn:SJAG_03155","GOA:B6K3H1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"otg3","uniquename":"SJAG_03150"},{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"}],"genes_by_uniquename":{"HGNC:1243":null,"SJAG_03155":null,"SPBC776.07":null,"YIL070C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial glycoprotein","id":"PF02330","interpro_description":"Mitochondrial glycoprotein","interpro_id":"IPR003428","interpro_name":"MAM33","locations":[{"end":276,"start":58}],"match_end":276,"match_start":58,"name":"MAM33"},{"dbname":"SUPERFAMILY","id":"SSF54529","interpro_description":"Mitochondrial glycoprotein superfamily","interpro_id":"IPR036561","interpro_name":"MAM33_sf","locations":[{"end":123,"start":53},{"end":277,"start":165}],"match_end":277,"match_start":53,"name":"Mitochondrial glycoprotein MAM33-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.280.10","interpro_description":"Mitochondrial glycoprotein superfamily","interpro_id":"IPR036561","interpro_name":"MAM33_sf","locations":[{"end":276,"start":44}],"match_end":276,"match_start":44,"name":"Mitochondrial glycoprotein"},{"dbname":"PANTHER","id":"PTHR10826","interpro_description":"Mitochondrial glycoprotein","interpro_id":"IPR003428","interpro_name":"MAM33","locations":[{"end":277,"start":48}],"match_end":277,"match_start":48,"name":"COMPLEMENT COMPONENT 1"},{"dbname":"COILS","id":"Coil","locations":[{"end":149,"start":129}],"match_end":149,"match_start":129,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":540453,"start_pos":539521,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":145,"start":119}}],"name":"mam33","ortholog_annotations":[{"gene_uniquename":"SJAG_03155","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1243","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03155","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03155","ortholog_taxonid":4932,"ortholog_uniquename":"YIL070C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03155","ortholog_taxonid":4932,"ortholog_uniquename":"YIL070C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosome assembly protein Mam33","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0005066","GO:0005739","MONDO:0004069","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0061668":null,"MONDO:0054677":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03155.1"],"transcripts_by_uniquename":{"SJAG_03155.1":null},"uniprot_identifier":"B6K3H1","uniquename":"SJAG_03155"}


id: SJAG_03156
data:
  {"coiled_coil_coords":[{"range":{"end":740,"start":720}}],"cv_annotations":{"biological_process":[{"annotations":[112012],"is_not":false,"summary":null,"term":"GO:0030490"},{"annotations":[78508],"is_not":false,"summary":null,"term":"GO:0006409"}],"cellular_component":[{"annotations":[78510],"is_not":false,"summary":null,"term":"GO:0032545"},{"annotations":[78509],"is_not":false,"summary":null,"term":"GO:0032040"},{"annotations":[78511],"is_not":false,"summary":null,"term":"GO:0034456"}],"molecular_function":[{"annotations":[112014],"is_not":false,"summary":null,"term":"GO:0030515"}]},"dbxrefs":["InterPro:IPR035371","InterPro:IPR035370","UniProtKB/TrEMBL:B6K3H2","GOA:B6K3H2","InterPro:IPR035082","InterPro:IPR035367","InterPro:IPR035369","EnsemblGenomes-Tr:EEB08029","EnsemblGenomes-Gn:SJAG_03156","InterPro:IPR035368","InterPro:IPR005554"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":47,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pre3","uniquename":"SJAG_03151"},{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"}],"genes_by_uniquename":{"HGNC:19910":null,"SJAG_03156":null,"SPBC776.08c":null,"YGR090W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nrap protein PAP/OAS1-like domain 5","id":"PF17406","interpro_description":"Nrap protein, domain 5","interpro_id":"IPR035370","interpro_name":"Nrap_D5","locations":[{"end":967,"start":814}],"match_end":967,"match_start":814,"name":"Nrap_D5"},{"dbname":"PFAM","description":"Nrap protein domain 3","id":"PF17404","interpro_description":"Nrap protein, domain 3","interpro_id":"IPR035368","interpro_name":"Nrap_D3","locations":[{"end":604,"start":453}],"match_end":604,"match_start":453,"name":"Nrap_D3"},{"dbname":"PFAM","description":"Nrap protein PAP/OAS-like domain","id":"PF17403","interpro_description":"Nrap protein, domain 2","interpro_id":"IPR035367","interpro_name":"Nrap_D2","locations":[{"end":447,"start":307}],"match_end":447,"match_start":307,"name":"Nrap_D2"},{"dbname":"PFAM","description":"Nrap protein nucleotidyltransferase domain 4","id":"PF17405","interpro_description":"Nrap protein, domain 4","interpro_id":"IPR035369","interpro_name":"Nrap_D4","locations":[{"end":812,"start":619}],"match_end":812,"match_start":619,"name":"Nrap_D4"},{"dbname":"PFAM","description":"Nrap protein domain 6","id":"PF17407","interpro_description":"Nrap protein, domain 6","interpro_id":"IPR035371","interpro_name":"Nrap_D6","locations":[{"end":1090,"start":970}],"match_end":1090,"match_start":970,"name":"Nrap_D6"},{"dbname":"PFAM","description":"Nrap protein domain 1","id":"PF03813","interpro_description":"Nrap protein domain 1","interpro_id":"IPR035082","interpro_name":"Nrap_D1","locations":[{"end":303,"start":165}],"match_end":303,"match_start":165,"name":"Nrap"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.3030","locations":[{"end":1092,"start":972}],"match_end":1092,"match_start":972},{"dbname":"GENE3D","id":"G3DSA:1.10.1410.10","locations":[{"end":450,"start":287}],"match_end":450,"match_start":287},{"dbname":"PANTHER","id":"PTHR17972","interpro_description":"NOL6/Upt22","interpro_id":"IPR005554","interpro_name":"NOL6/Upt22","locations":[{"end":1091,"start":33}],"match_end":1091,"match_start":33,"name":"NUCLEOLAR RNA-ASSOCIATED PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":740,"start":720}],"match_end":740,"match_start":720,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":47,"start":1}],"match_end":47,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":12,"start":1}],"match_end":12,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":543988,"start_pos":540660,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":76,"start":65}},{"range":{"end":554,"start":546}}],"name":"utp22","ortholog_annotations":[{"gene_uniquename":"SJAG_03156","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19910","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03156","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03156","ortholog_taxonid":4932,"ortholog_uniquename":"YGR090W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03156","ortholog_taxonid":4932,"ortholog_uniquename":"YGR090W","reference_uniquename":"PMID:26896847"}],"product":"small-subunit processome, UTP-C complex subunit Utp22","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030515"]}},"subset_termids":["GO:0005634","GO:0006913","GO:0005730","GO:0030684","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006409":null,"GO:0030490":null,"GO:0030515":null,"GO:0032040":null,"GO:0032545":null,"GO:0034456":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03156.1"],"transcripts_by_uniquename":{"SJAG_03156.1":null},"uniprot_identifier":"B6K3H2","uniquename":"SJAG_03156"}


id: SJAG_03157
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112018],"is_not":false,"summary":null,"term":"GO:0000290"},{"annotations":[76578],"is_not":false,"summary":null,"term":"GO:0033962"},{"annotations":[76579],"is_not":false,"summary":null,"term":"GO:0034063"}],"cellular_component":[{"annotations":[76577],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[76575],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[65035],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[76576],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[65036],"is_not":false,"summary":null,"term":"GO:0003724"}],"mondo":[{"annotations":[86815],"is_not":false,"summary":null,"term":"MONDO:0032851"}]},"dbxrefs":["InterPro:IPR014001","InterPro:IPR027417","InterPro:IPR000629","EnsemblGenomes-Tr:EEB08030","InterPro:IPR014014","GOA:B6K3H3","InterPro:IPR011545","InterPro:IPR001650","EnsemblGenomes-Gn:SJAG_03157","UniProtKB/TrEMBL:B6K3H3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":498,"start":430}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hom6","uniquename":"SJAG_03152"},{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"}],"genes_by_uniquename":{"HGNC:2747":null,"SJAG_03157":null,"SPBC776.09":null,"YDL160C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DEAD/DEAH box helicase","id":"PF00270","interpro_description":"DEAD/DEAH box helicase domain","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH_box_helicase_dom","locations":[{"end":229,"start":69}],"match_end":229,"match_start":69,"name":"DEAD"},{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF00271","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":377,"start":269}],"match_end":377,"match_start":269,"name":"Helicase_C"},{"dbname":"CDD","description":"SF2_C_DEAD","id":"cd18787","locations":[{"end":386,"start":257}],"match_end":386,"match_start":257,"name":"SF2_C_DEAD"},{"dbname":"CDD","description":"DEADc_DDX6","id":"cd17940","locations":[{"end":247,"start":47}],"match_end":247,"match_start":47,"name":"DEADc_DDX6"},{"dbname":"PROSITE_PATTERNS","description":"DEAD-box subfamily ATP-dependent helicases signature.","id":"PS00039","interpro_description":"ATP-dependent RNA helicase DEAD-box, conserved site","interpro_id":"IPR000629","interpro_name":"RNA-helicase_DEAD-box_CS","locations":[{"end":200,"start":192}],"match_end":200,"match_start":192,"name":"DEAD_ATP_HELICASE"},{"dbname":"PROSITE_PROFILES","description":"DEAD-box RNA helicase Q motif profile.","id":"PS51195","interpro_description":"RNA helicase, DEAD-box type, Q motif","interpro_id":"IPR014014","interpro_name":"RNA_helicase_DEAD_Q_motif","locations":[{"end":73,"start":45}],"match_end":73,"match_start":45,"name":"Q_MOTIF"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":246,"start":76}],"match_end":246,"match_start":76,"name":"HELICASE_ATP_BIND_1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":416,"start":256}],"match_end":416,"match_start":256,"name":"HELICASE_CTER"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":377,"start":296}],"match_end":377,"match_start":296,"name":"helicmild6"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":260,"start":64}],"match_end":260,"match_start":64,"name":"ultradead3"},{"dbname":"FUNFAM","description":"ATP-dependent RNA helicase DDX6","id":"G3DSA:3.40.50.300:FF:000364","locations":[{"end":249,"start":26}],"match_end":249,"match_start":26},{"dbname":"FUNFAM","description":"ATP-dependent RNA helicase DDX6","id":"G3DSA:3.40.50.300:FF:000114","locations":[{"end":420,"start":250}],"match_end":420,"match_start":250},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":398,"start":113}],"match_end":398,"match_start":113,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":423,"start":13}],"match_end":423,"match_start":13},{"dbname":"PANTHER","id":"PTHR47960","locations":[{"end":417,"start":15}],"match_end":417,"match_start":15,"name":"DEAD-BOX ATP-DEPENDENT RNA HELICASE 50"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":498,"start":430}],"match_end":498,"match_start":430,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":485,"start":465}],"match_end":485,"match_start":465,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":450,"start":431}],"match_end":450,"match_start":431,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":546084,"start_pos":544448,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":151,"start":139}},{"range":{"end":484,"start":450}}],"name":"ste13","ortholog_annotations":[{"gene_uniquename":"SJAG_03157","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2747","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03157","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03157","ortholog_taxonid":4932,"ortholog_uniquename":"YDL160C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03157","ortholog_taxonid":4932,"ortholog_uniquename":"YDL160C","reference_uniquename":"PMID:26896847"}],"product":"ATP-dependent RNA helicase Ste13/Dhh1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003729"],"not-binding":["GO:0003724"]}},"subset_termids":["GO:0140098","GO:0000932","GO:0016071","GO:0010494"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000290":null,"GO:0000932":null,"GO:0003724":null,"GO:0003729":null,"GO:0005524":null,"GO:0010494":null,"GO:0033962":null,"GO:0034063":null,"MONDO:0032851":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03157.1"],"transcripts_by_uniquename":{"SJAG_03157.1":null},"uniprot_identifier":"B6K3H3","uniquename":"SJAG_03157"}


id: SJAG_03158
data:
  {"coiled_coil_coords":[{"range":{"end":138,"start":118}}],"cv_annotations":{"biological_process":[{"annotations":[77294],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[112029],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[112024],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[112025],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[65864],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[77295],"is_not":false,"summary":null,"term":"GO:0017119"},{"annotations":[112027],"is_not":false,"summary":null,"term":"GO:0005634"}],"mondo":[{"annotations":[86418],"is_not":false,"summary":null,"term":"MONDO:0013810"},{"annotations":[85981],"is_not":false,"summary":null,"term":"MONDO:0014131"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03158","EnsemblGenomes-Tr:EEB08031","InterPro:IPR010490","UniProtKB/TrEMBL:B6K3H4","GOA:B6K3H4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec2302","uniquename":"SJAG_03153"},{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"}],"genes_by_uniquename":{"HGNC:18621":null,"SJAG_03158":null,"SPBC776.10c":null,"YNL041C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Conserved Oligomeric Golgi complex subunit 6, C-terminal","id":"PF20653","interpro_description":"Conserved Oligomeric Golgi complex subunit 6, C-terminal","interpro_id":"IPR048369","interpro_name":"COG6_C","locations":[{"end":646,"start":196}],"match_end":646,"match_start":196,"name":"COG6_C"},{"dbname":"PFAM","description":"Conserved oligomeric complex COG6, N-terminal","id":"PF06419","interpro_description":"Conserved oligomeric complex COG6, N-terminal","interpro_id":"IPR048368","interpro_name":"COG6_N","locations":[{"end":161,"start":50}],"match_end":161,"match_start":50,"name":"COG6_N"},{"dbname":"SMART","id":"SM01087","interpro_description":"Conserved oligomeric Golgi complex subunit 6","interpro_id":"IPR010490","interpro_name":"COG6","locations":[{"end":647,"start":44}],"match_end":647,"match_start":44,"name":"COG6_2"},{"dbname":"PANTHER","id":"PTHR21506","interpro_description":"Conserved oligomeric Golgi complex subunit 6","interpro_id":"IPR010490","interpro_name":"COG6","locations":[{"end":651,"start":19}],"match_end":651,"match_start":19,"name":"COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6"},{"dbname":"COILS","id":"Coil","locations":[{"end":138,"start":118}],"match_end":138,"match_start":118,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":548393,"start_pos":546312,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":198,"start":189}},{"range":{"end":602,"start":586}},{"range":{"end":641,"start":630}}],"name":"cog6","ortholog_annotations":[{"gene_uniquename":"SJAG_03158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18621","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03158","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03158","ortholog_taxonid":4932,"ortholog_uniquename":"YNL041C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03158","ortholog_taxonid":4932,"ortholog_uniquename":"YNL041C","reference_uniquename":"PMID:26896847"}],"product":"Golgi transport complex peripheral subunit Cog6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005794","MONDO:0006025","MONDO:0024322","MONDO:0005066","MONDO:0005093","GO:0016192","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005634":null,"GO:0005829":null,"GO:0006886":null,"GO:0006891":null,"GO:0017119":null,"GO:0032153":null,"MONDO:0013810":null,"MONDO:0014131":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03158.1"],"transcripts_by_uniquename":{"SJAG_03158.1":null},"uniprot_identifier":"B6K3H4","uniquename":"SJAG_03158"}


id: SJAG_03159
data:
  {"cv_annotations":{"biological_process":[{"annotations":[117630],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[74022],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[112034],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[117628],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[74021],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6K3H5","InterPro:IPR030878","UniProtKB/TrEMBL:B6K3H5","EnsemblGenomes-Gn:SJAG_03159","InterPro:IPR021131","InterPro:IPR001196","EnsemblGenomes-Tr:EEB08032","InterPro:IPR036227"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":38,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpc1","uniquename":"SJAG_03154"},{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"}],"genes_by_uniquename":{"HGNC:10329":null,"SJAG_03159":null,"SPBC776.11":null,"SPCC5E4.07":null,"YGL103W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A","id":"PF00828","interpro_description":"Large ribosomal subunit protein uL15/eL18","interpro_id":"IPR021131","interpro_name":"Ribosomal_uL15/eL18","locations":[{"end":145,"start":28}],"match_end":145,"match_start":28,"name":"Ribosomal_L27A"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L15 signature.","id":"PS00475","interpro_description":"Large ribosomal subunit protein uL15, conserved site","interpro_id":"IPR001196","interpro_name":"Ribosomal_uL15_CS","locations":[{"end":141,"start":110}],"match_end":141,"match_start":110,"name":"RIBOSOMAL_L15"},{"dbname":"FUNFAM","description":"60S ribosomal protein L27a","id":"G3DSA:3.100.10.10:FF:000002","locations":[{"end":148,"start":58}],"match_end":148,"match_start":58},{"dbname":"SUPERFAMILY","id":"SSF52080","interpro_description":"Large ribosomal subunit protein uL15/eL18 superfamily","interpro_id":"IPR036227","interpro_name":"Ribosomal_uL15/eL18_sf","locations":[{"end":147,"start":6}],"match_end":147,"match_start":6,"name":"Ribosomal proteins L15p and L18e"},{"dbname":"GENE3D","id":"G3DSA:3.100.10.10","locations":[{"end":148,"start":58}],"match_end":148,"match_start":58},{"dbname":"PANTHER","id":"PTHR11721","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L27A"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL15 [rplO].","id":"MF_01341","interpro_description":"Large ribosomal subunit protein uL15","interpro_id":"IPR030878","interpro_name":"Ribosomal_uL15","locations":[{"end":147,"start":1}],"match_end":147,"match_start":1,"name":"Ribosomal_L15"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":38,"start":1}],"match_end":38,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":13,"start":1},{"end":30,"start":21}],"match_end":30,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":549435,"start_pos":548989,"strand":"forward"},"name":"rpl28a","ortholog_annotations":[{"gene_uniquename":"SJAG_03159","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10329","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10329","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC5E4.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":4932,"ortholog_uniquename":"YGL103W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":4932,"ortholog_uniquename":"YGL103W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03159","ortholog_taxonid":4932,"ortholog_uniquename":"YGL103W","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L27/L28","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0005730","GO:0030684","GO:0002181","GO:0005829","GO:0022626","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03159.1"],"transcripts_by_uniquename":{"SJAG_03159.1":null},"uniprot_identifier":"B6K3H5","uniquename":"SJAG_03159"}


id: SJAG_03160
data:
  {"coiled_coil_coords":[{"range":{"end":455,"start":435}}],"cv_annotations":{"biological_process":[{"annotations":[112048],"is_not":false,"summary":null,"term":"GO:0000727"},{"annotations":[112049],"is_not":false,"summary":null,"term":"GO:0000082"},{"annotations":[112050],"is_not":false,"summary":null,"term":"GO:0033314"},{"annotations":[112051],"is_not":false,"summary":null,"term":"GO:0031573"},{"annotations":[112052],"is_not":false,"summary":null,"term":"GO:0045739"},{"annotations":[112053],"is_not":false,"summary":null,"term":"GO:1903468"}],"cellular_component":[{"annotations":[112044],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[112045],"is_not":false,"summary":null,"term":"GO:0031431"}],"molecular_function":[{"annotations":[63545],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[75316],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR008271","EnsemblGenomes-Tr:EEB08033","InterPro:IPR011009","UniProtKB/TrEMBL:B6K3H6","EnsemblGenomes-Gn:SJAG_03160","GOA:B6K3H6","InterPro:IPR000719"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":28,"start":1}},{"range":{"end":493,"start":441}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mam33","uniquename":"SJAG_03155"},{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"}],"genes_by_uniquename":{"HGNC:1745":null,"SJAG_03160":null,"SPBC776.12c":null,"YDL017W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":244,"start":117},{"end":430,"start":277}],"match_end":430,"match_start":117,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_Cdc7","id":"cd14019","locations":[{"end":430,"start":66}],"match_end":430,"match_start":66,"name":"STKc_Cdc7"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":221,"start":209}],"match_end":221,"match_start":209,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":430,"start":68}],"match_end":430,"match_start":68,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":430,"start":68}],"match_end":430,"match_start":68,"name":"serkin_6"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":87,"start":54},{"end":241,"start":117},{"end":431,"start":279}],"match_end":431,"match_start":54,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":173,"start":46}],"match_end":173,"match_start":46,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":452,"start":178}],"match_end":452,"match_start":178,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR44167","locations":[{"end":439,"start":47}],"match_end":439,"match_start":47,"name":"OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":455,"start":435}],"match_end":455,"match_start":435,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":28,"start":1},{"end":493,"start":441}],"match_end":493,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":458,"start":441}],"match_end":458,"match_start":441,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":551411,"start_pos":549752,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":458,"start":431}}],"name":"hsk1","ortholog_annotations":[{"gene_uniquename":"SJAG_03160","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1745","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03160","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03160","ortholog_taxonid":4932,"ortholog_uniquename":"YDL017W","reference_uniquename":"PMID:29761456"}],"product":"Dbf4(Dfp1)-dependent protein kinase Hsk1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0005634","GO:0023052","GO:0006310","GO:0006281","GO:0004672","GO:0016301","GO:0044772","GO:0006260","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000082":null,"GO:0000727":null,"GO:0004674":null,"GO:0005524":null,"GO:0005737":null,"GO:0031431":null,"GO:0031573":null,"GO:0033314":null,"GO:0045739":null,"GO:1903468":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03160.1"],"transcripts_by_uniquename":{"SJAG_03160.1":null},"uniprot_identifier":"B6K3H6","uniquename":"SJAG_03160"}


id: SJAG_03161
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71642],"is_not":false,"summary":null,"term":"GO:0010032"},{"annotations":[71640],"is_not":false,"summary":null,"term":"GO:0007076"}],"cellular_component":[{"annotations":[71641],"is_not":false,"summary":null,"term":"GO:0000796"},{"annotations":[112058],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[112059],"is_not":false,"summary":null,"term":"GO:0000791"},{"annotations":[112060],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[112061],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[112062],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[112066],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[112067],"is_not":false,"summary":null,"term":"GO:0061776"},{"annotations":[112068],"is_not":false,"summary":null,"term":"GO:0106260"},{"annotations":[71638],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[112071],"is_not":false,"summary":null,"term":"GO:0003697"}],"mondo":[{"annotations":[85979],"is_not":false,"summary":null,"term":"MONDO:0054804"}]},"dbxrefs":["InterPro:IPR016024","UniProtKB/TrEMBL:B6K3H7","EnsemblGenomes-Gn:SJAG_03161","InterPro:IPR007673","InterPro:IPR026971","InterPro:IPR024324","InterPro:IPR032682","EnsemblGenomes-Tr:EEB08034","GOA:B6K3H7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"utp22","uniquename":"SJAG_03156"},{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"}],"genes_by_uniquename":{"HGNC:24305":null,"SJAG_03161":null,"SPBC776.13":null,"YLR272C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"non-SMC mitotic condensation complex subunit 1, N-term","id":"PF12922","interpro_description":"Condensin complex subunit 1, N-terminal","interpro_id":"IPR024324","interpro_name":"Condensin_cplx_su1_N","locations":[{"end":232,"start":73}],"match_end":232,"match_start":73,"name":"Cnd1_N"},{"dbname":"PFAM","description":"non-SMC mitotic condensation complex subunit 1","id":"PF12717","interpro_description":"Condensin complex subunit 1, C-terminal","interpro_id":"IPR032682","interpro_name":"Cnd1_C","locations":[{"end":1129,"start":966}],"match_end":1129,"match_start":966,"name":"Cnd1"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":430,"start":255},{"end":794,"start":564},{"end":1080,"start":924}],"match_end":1080,"match_start":255,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":459,"start":281},{"end":1143,"start":895}],"match_end":1143,"match_start":281},{"dbname":"PANTHER","id":"PTHR14222","interpro_description":"Condensin subunit 1/Condensin-2 complex subunit D3","interpro_id":"IPR026971","interpro_name":"CND1/NCAPD3","locations":[{"end":1140,"start":52}],"match_end":1140,"match_start":52,"name":"CONDENSIN"},{"dbname":"PIRSF","id":"PIRSF017127","interpro_description":"Condensin subunit 1","interpro_id":"IPR007673","interpro_name":"Condensin_cplx_su1","locations":[{"end":1148,"start":1}],"match_end":1148,"match_start":1,"name":"Condensin_D2"}],"location":{"chromosome_name":"supercont5.2","end_pos":555137,"start_pos":551584,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":97,"start":82}},{"range":{"end":254,"start":243}},{"range":{"end":518,"start":503}},{"range":{"end":704,"start":691}}],"name":"cnd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03161","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24305","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03161","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03161","ortholog_taxonid":4932,"ortholog_uniquename":"YLR272C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03161","ortholog_taxonid":4932,"ortholog_uniquename":"YLR272C","reference_uniquename":"PMID:26896847"}],"product":"condensin complex non-SMC subunit Cnd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003697","GO:0061776","GO:0042393","GO:0106260"],"not-binding":["GO:0016887"]}},"subset_termids":["GO:0000070","MONDO:0006025","GO:0005694","GO:0005634","GO:0061776","MONDO:0700092","GO:0016887","GO:0060090","GO:0000776","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0000791":null,"GO:0000796":null,"GO:0003697":null,"GO:0005730":null,"GO:0005737":null,"GO:0007076":null,"GO:0010032":null,"GO:0016887":null,"GO:0042393":null,"GO:0061776":null,"GO:0106260":null,"GO:0140602":null,"MONDO:0054804":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03161.1"],"transcripts_by_uniquename":{"SJAG_03161.1":null},"uniprot_identifier":"B6K3H7","uniquename":"SJAG_03161"}


id: SJAG_03162
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112076],"is_not":false,"summary":null,"term":"GO:0046339"},{"annotations":[112077],"is_not":false,"summary":null,"term":"GO:0140042"},{"annotations":[74457],"is_not":false,"summary":null,"term":"GO:0019432"}],"cellular_component":[{"annotations":[112072],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[112074],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[74460],"is_not":false,"summary":null,"term":"GO:0097038"}],"molecular_function":[{"annotations":[62519],"is_not":false,"summary":null,"term":"GO:0008374"},{"annotations":[74459],"is_not":false,"summary":null,"term":"GO:0046027"}],"mondo":[{"annotations":[86911],"is_not":false,"summary":null,"term":"MONDO:0007620"},{"annotations":[85386],"is_not":false,"summary":null,"term":"MONDO:0009515"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08035","GOA:B6K3H8","InterPro:IPR003386","EnsemblGenomes-Gn:SJAG_03162","InterPro:IPR029058","UniProtKB/TrEMBL:B6K3H8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":46,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ste13","uniquename":"SJAG_03157"},{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"}],"genes_by_uniquename":{"HGNC:17163":null,"HGNC:6522":null,"SJAG_03162":null,"SPBC776.14":null,"YNR008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Lecithin:cholesterol acyltransferase","id":"PF02450","interpro_description":"Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase","interpro_id":"IPR003386","interpro_name":"LACT/PDAT_acylTrfase","locations":[{"end":601,"start":168}],"match_end":601,"match_start":168,"name":"LCAT"},{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":156,"start":140},{"end":425,"start":220},{"end":557,"start":481}],"match_end":557,"match_start":140,"name":"alpha/beta-Hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1820","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":381,"start":200}],"match_end":381,"match_start":200,"name":"alpha/beta hydrolase"},{"dbname":"PANTHER","id":"PTHR11440","locations":[{"end":620,"start":130}],"match_end":620,"match_start":130,"name":"LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":46,"start":1}],"match_end":46,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":29,"start":16}],"match_end":29,"match_start":16,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":15,"start":1}],"match_end":15,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":558239,"start_pos":555625,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":14,"start":1}},{"range":{"end":65,"start":54}},{"range":{"end":407,"start":398}}],"name":"plh1","ortholog_annotations":[{"gene_uniquename":"SJAG_03162","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17163","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03162","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6522","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03162","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03162","ortholog_taxonid":4932,"ortholog_uniquename":"YNR008W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03162","ortholog_taxonid":4932,"ortholog_uniquename":"YNR008W","reference_uniquename":"PMID:26896847"}],"product":"phospholipid-diacylglycerol acyltransferase Plh1/Lro1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0046027","GO:0008374"]}},"subset_termids":["GO:0005789","GO:0005938","GO:0006629","GO:0005783","GO:0016746","MONDO:0002525","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0008374":null,"GO:0019432":null,"GO:0032541":null,"GO:0046027":null,"GO:0046339":null,"GO:0097038":null,"GO:0140042":null,"MONDO:0007620":null,"MONDO:0009515":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":72,"start":55}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03162.1"],"transcripts_by_uniquename":{"SJAG_03162.1":null},"uniprot_identifier":"B6K3H8","uniquename":"SJAG_03162"}


id: SJAG_03163
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75745],"is_not":false,"summary":null,"term":"GO:0006099"}],"cellular_component":[{"annotations":[112082],"is_not":false,"summary":null,"term":"GO:0042645"},{"annotations":[64044],"is_not":false,"summary":null,"term":"GO:0045252"}],"molecular_function":[{"annotations":[75744],"is_not":false,"summary":null,"term":"GO:0004149"}],"mondo":[{"annotations":[87129],"is_not":false,"summary":null,"term":"MONDO:0032771"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03163","EnsemblGenomes-Tr:EEB08036","InterPro:IPR003016","InterPro:IPR011053","GOA:B6K3H9","InterPro:IPR006255","InterPro:IPR023213","InterPro:IPR001078","UniProtKB/TrEMBL:B6K3H9","InterPro:IPR000089"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":203,"start":118}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cog6","uniquename":"SJAG_03158"},{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"}],"genes_by_uniquename":{"HGNC:2911":null,"SJAG_03163":null,"SPBC776.15c":null,"YDR148C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Biotin-requiring enzyme","id":"PF00364","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":114,"start":42}],"match_end":114,"match_start":42,"name":"Biotin_lipoyl"},{"dbname":"PFAM","description":"2-oxoacid dehydrogenases acyltransferase (catalytic domain)","id":"PF00198","interpro_description":"2-oxoacid dehydrogenase acyltransferase, catalytic domain","interpro_id":"IPR001078","interpro_name":"2-oxoacid_DH_actylTfrase","locations":[{"end":437,"start":205}],"match_end":437,"match_start":205,"name":"2-oxoacid_dh"},{"dbname":"CDD","description":"lipoyl_domain","id":"cd06849","locations":[{"end":104,"start":41}],"match_end":104,"match_start":41,"name":"lipoyl_domain"},{"dbname":"PROSITE_PATTERNS","description":"2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.","id":"PS00189","interpro_description":"2-oxo acid dehydrogenase, lipoyl-binding site","interpro_id":"IPR003016","interpro_name":"2-oxoA_DH_lipoyl-BS","locations":[{"end":94,"start":65}],"match_end":94,"match_start":65,"name":"LIPOYL"},{"dbname":"PROSITE_PROFILES","description":"Biotinyl/lipoyl domain profile.","id":"PS50968","interpro_description":"Biotin/lipoyl attachment","interpro_id":"IPR000089","interpro_name":"Biotin_lipoyl","locations":[{"end":115,"start":40}],"match_end":115,"match_start":40,"name":"BIOTINYL_LIPOYL"},{"dbname":"FUNFAM","description":"Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex","id":"G3DSA:3.30.559.10:FF:000007","locations":[{"end":437,"start":194}],"match_end":437,"match_start":194},{"dbname":"SUPERFAMILY","id":"SSF52777","locations":[{"end":437,"start":205}],"match_end":437,"match_start":205,"name":"CoA-dependent acyltransferases"},{"dbname":"SUPERFAMILY","id":"SSF51230","interpro_description":"Single hybrid motif","interpro_id":"IPR011053","interpro_name":"Single_hybrid_motif","locations":[{"end":134,"start":39}],"match_end":134,"match_start":39,"name":"Single hybrid motif"},{"dbname":"GENE3D","id":"G3DSA:3.30.559.10","interpro_description":"Chloramphenicol acetyltransferase-like domain superfamily","interpro_id":"IPR023213","interpro_name":"CAT-like_dom_sf","locations":[{"end":436,"start":190}],"match_end":436,"match_start":190},{"dbname":"GENE3D","id":"G3DSA:2.40.50.100","locations":[{"end":139,"start":38}],"match_end":139,"match_start":38},{"dbname":"PANTHER","id":"PTHR43416","interpro_description":"2-oxoacid dehydrogenase","interpro_id":"IPR050537","interpro_name":"2-oxoacid_dehydrogenase","locations":[{"end":437,"start":25}],"match_end":437,"match_start":25,"name":"DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":203,"start":118}],"match_end":203,"match_start":118,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":129,"start":118},{"end":202,"start":169}],"match_end":202,"match_start":118,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":145,"start":130}],"match_end":145,"match_start":130,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":168,"start":158}],"match_end":168,"match_start":158,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"dihydrolipoyllysine-residue succinyltransferase","id":"TIGR01347","interpro_description":"Dihydrolipoamide succinyltransferase","interpro_id":"IPR006255","interpro_name":"SucB","locations":[{"end":437,"start":41}],"match_end":437,"match_start":41,"name":"sucB"}],"location":{"chromosome_name":"supercont5.2","end_pos":560119,"start_pos":558331,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":187,"start":101}},{"range":{"end":202,"start":190}}],"name":"kgd2","ortholog_annotations":[{"gene_uniquename":"SJAG_03163","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2911","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03163","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC776.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03163","ortholog_taxonid":4932,"ortholog_uniquename":"YDR148C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03163","ortholog_taxonid":4932,"ortholog_uniquename":"YDR148C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial dihydrolipoamide S-succinyltransferase, (e2 component of oxoglutarate dehydrogenase complex) Kgd2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004149"]}},"subset_termids":["GO:0006091","GO:0016746","GO:0140096","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004149":null,"GO:0006099":null,"GO:0042645":null,"GO:0045252":null,"MONDO:0032771":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03163.1"],"transcripts_by_uniquename":{"SJAG_03163.1":null},"uniprot_identifier":"B6K3H9","uniquename":"SJAG_03163"}


id: SJAG_03164
data:
  {"alleles_by_uniquename":{"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[73881],"is_not":false,"summary":null,"term":"GO:0006207"},{"annotations":[61808],"is_not":false,"summary":null,"term":"GO:0044205"}],"cellular_component":[{"annotations":[73879],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116741],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[116742],"is_not":false,"summary":null,"term":"GO:0140453"}],"molecular_function":[{"annotations":[73880],"is_not":false,"summary":null,"term":"GO:0004590"}],"single_locus_phenotype":[{"annotations":[119457],"is_not":false,"summary":null,"term":"FYPO:0001012"}]},"dbxrefs":["InterPro:IPR001754","EnsemblGenomes-Gn:SJAG_03164","InterPro:IPR011060","EnsemblGenomes-Tr:EEB08037","InterPro:IPR013785","InterPro:IPR014732","GOA:B6K3I0","InterPro:IPR018089","UniProtKB/TrEMBL:B6K3I0"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:19330769","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl28a","uniquename":"SJAG_03159"},{"name":"hsk1","uniquename":"SJAG_03160"},{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"}],"genes_by_uniquename":{"HGNC:12563":null,"SJAG_03164":null,"SPCC330.05c":null,"YEL021W":null},"genotypes_by_uniquename":{"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Orotidine 5'-phosphate decarboxylase / HUMPS family","id":"PF00215","interpro_description":"Orotidine 5'-phosphate decarboxylase domain","interpro_id":"IPR001754","interpro_name":"OMPdeCOase_dom","locations":[{"end":249,"start":33}],"match_end":249,"match_start":33,"name":"OMPdecase"},{"dbname":"CDD","description":"OMP_decarboxylase_like","id":"cd04725","locations":[{"end":249,"start":35}],"match_end":249,"match_start":35,"name":"OMP_decarboxylase_like"},{"dbname":"PROSITE_PATTERNS","description":"Orotidine 5'-phosphate decarboxylase active site.","id":"PS00156","interpro_description":"Orotidine 5'-phosphate decarboxylase, active site","interpro_id":"IPR018089","interpro_name":"OMPdecase_AS","locations":[{"end":103,"start":90}],"match_end":103,"match_start":90,"name":"OMPDECASE"},{"dbname":"SMART","id":"SM00934","interpro_description":"Orotidine 5'-phosphate decarboxylase domain","interpro_id":"IPR001754","interpro_name":"OMPdeCOase_dom","locations":[{"end":246,"start":34}],"match_end":246,"match_start":34,"name":"OMPdecase_2"},{"dbname":"FUNFAM","description":"Decarboxylase,orotidine phosphate","id":"G3DSA:3.20.20.70:FF:000114","locations":[{"end":263,"start":4}],"match_end":263,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF51366","interpro_description":"Ribulose-phosphate binding barrel","interpro_id":"IPR011060","interpro_name":"RibuloseP-bd_barrel","locations":[{"end":261,"start":7}],"match_end":261,"match_start":7,"name":"Ribulose-phoshate binding barrel"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":263,"start":4}],"match_end":263,"match_start":4,"name":"Aldolase class I"},{"dbname":"PANTHER","id":"PTHR19278","locations":[{"end":260,"start":7}],"match_end":260,"match_start":7,"name":"OROTATE PHOSPHORIBOSYLTRANSFERASE"},{"dbname":"NCBIFAM","description":"orotidine-5'-phosphate decarboxylase","id":"TIGR01740","interpro_description":"Orotidine 5'-phosphate decarboxylase","interpro_id":"IPR014732","interpro_name":"OMPdecase","locations":[{"end":250,"start":36}],"match_end":250,"match_start":36,"name":"pyrF"}],"location":{"chromosome_name":"supercont5.2","end_pos":563473,"start_pos":562679,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":148,"start":138}},{"range":{"end":212,"start":199}}],"name":"ura4","ortholog_annotations":[{"gene_uniquename":"SJAG_03164","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12563","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03164","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC330.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03164","ortholog_taxonid":4932,"ortholog_uniquename":"YEL021W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03164","ortholog_taxonid":4932,"ortholog_uniquename":"YEL021W","reference_uniquename":"PMID:26896847"}],"product":"orotidine 5'-phosphate decarboxylase Ura4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:19330769":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004590"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0001012"]}},"subset_termids":["GO:0005829","GO:0016829","GO:0055086","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0001012":null,"GO:0004590":null,"GO:0005634":null,"GO:0005829":null,"GO:0006207":null,"GO:0044205":null,"GO:0140453":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03164.1"],"transcripts_by_uniquename":{"SJAG_03164.1":null},"uniprot_identifier":"B6K3I0","uniquename":"SJAG_03164"}


id: SJAG_03166
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":42,"start":42}}],"cv_annotations":{"biological_process":[{"annotations":[70126],"is_not":false,"summary":null,"term":"GO:0045454"},{"annotations":[57537],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[70130],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[70125],"is_not":false,"summary":null,"term":"GO:0042744"},{"annotations":[116753],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[116746],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70128],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[116748],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[70129],"is_not":false,"summary":null,"term":"GO:0005777"}],"molecular_function":[{"annotations":[70131],"is_not":false,"summary":null,"term":"GO:0008379"}]},"dbxrefs":["InterPro:IPR037944","EnsemblGenomes-Tr:EEB08038","UniProtKB/TrEMBL:B6K3I1","EnsemblGenomes-Gn:SJAG_03166","InterPro:IPR013740","GOA:B6K3I1","InterPro:IPR036249","InterPro:IPR013766"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cnd1","uniquename":"SJAG_03161"},{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"}],"genes_by_uniquename":{"HGNC:9355":null,"SJAG_03166":null,"SPCC330.06c":null,"YLR109W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Redoxin","id":"PF08534","interpro_description":"Redoxin","interpro_id":"IPR013740","interpro_name":"Redoxin","locations":[{"end":152,"start":5}],"match_end":152,"match_start":5,"name":"Redoxin"},{"dbname":"CDD","description":"PRX5_like","id":"cd03013","interpro_description":"Peroxiredoxin-5-like","interpro_id":"IPR037944","interpro_name":"PRX5-like","locations":[{"end":153,"start":5}],"match_end":153,"match_start":5,"name":"PRX5_like"},{"dbname":"PROSITE_PROFILES","description":"Thioredoxin domain profile.","id":"PS51352","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":155,"start":2}],"match_end":155,"match_start":2,"name":"THIOREDOXIN_2"},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":154,"start":1}],"match_end":154,"match_start":1,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":155,"start":1}],"match_end":155,"match_start":1,"name":"Glutaredoxin"},{"dbname":"PANTHER","id":"PTHR10430","interpro_description":"Peroxiredoxin-5-like","interpro_id":"IPR037944","interpro_name":"PRX5-like","locations":[{"end":154,"start":2}],"match_end":154,"match_start":2,"name":"PEROXIREDOXIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":564888,"start_pos":564421,"strand":"reverse"},"name":"pmp20","ortholog_annotations":[{"gene_uniquename":"SJAG_03166","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9355","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03166","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC330.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03166","ortholog_taxonid":4932,"ortholog_uniquename":"YLR109W","reference_uniquename":"PMID:29761456"}],"product":"thioredoxin-related chaperone Pmp20","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008379"]}},"subset_termids":["GO:0051604","GO:0005634","GO:0005829","GO:0016491","GO:0051920","GO:0005739","GO:0098754","GO:0006457","GO:0005777"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005777":null,"GO:0005829":null,"GO:0008379":null,"GO:0034599":null,"GO:0042026":null,"GO:0042744":null,"GO:0045454":null,"GO:0098869":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03166.1"],"transcripts_by_uniquename":{"SJAG_03166.1":null},"uniprot_identifier":"B6K3I1","uniquename":"SJAG_03166"}


id: SJAG_03167
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77154],"is_not":false,"summary":null,"term":"GO:0000162"}],"cellular_component":[{"annotations":[77153],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[104392],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65724],"is_not":false,"summary":null,"term":"GO:0004048"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08039","InterPro:IPR000312","EnsemblGenomes-Gn:SJAG_03167","InterPro:IPR005940","InterPro:IPR035902","UniProtKB/TrEMBL:B6K3I2","GOA:B6K3I2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"plh1","uniquename":"SJAG_03162"},{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"}],"genes_by_uniquename":{"SJAG_03167":null,"SPBC16G5.08":null,"YDR354W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl transferase family, a/b domain","id":"PF00591","interpro_description":"Glycosyl transferase, family 3","interpro_id":"IPR000312","interpro_name":"Glycosyl_Trfase_fam3","locations":[{"end":340,"start":85}],"match_end":340,"match_start":85,"name":"Glycos_transf_3"},{"dbname":"FUNFAM","description":"Anthranilate phosphoribosyltransferase","id":"G3DSA:3.40.1030.10:FF:000002","locations":[{"end":352,"start":82}],"match_end":352,"match_start":82},{"dbname":"SUPERFAMILY","id":"SSF52418","interpro_description":"Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily","interpro_id":"IPR035902","interpro_name":"Nuc_phospho_transferase","locations":[{"end":352,"start":87}],"match_end":352,"match_start":87,"name":"Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.1030.10","interpro_description":"Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily","interpro_id":"IPR035902","interpro_name":"Nuc_phospho_transferase","locations":[{"end":355,"start":83}],"match_end":355,"match_start":83,"name":"Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain"},{"dbname":"PANTHER","id":"PTHR43285","interpro_description":"Anthranilate phosphoribosyl transferase","interpro_id":"IPR005940","interpro_name":"Anthranilate_Pribosyl_Tfrase","locations":[{"end":351,"start":24}],"match_end":351,"match_start":24,"name":"ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE"},{"dbname":"HAMAP","description":"Anthranilate phosphoribosyltransferase [trpD].","id":"MF_00211","interpro_description":"Anthranilate phosphoribosyl transferase","interpro_id":"IPR005940","interpro_name":"Anthranilate_Pribosyl_Tfrase","locations":[{"end":349,"start":10}],"match_end":349,"match_start":10,"name":"TrpD"},{"dbname":"NCBIFAM","description":"anthranilate phosphoribosyltransferase","id":"TIGR01245","interpro_description":"Anthranilate phosphoribosyl transferase","interpro_id":"IPR005940","interpro_name":"Anthranilate_Pribosyl_Tfrase","locations":[{"end":348,"start":29}],"match_end":348,"match_start":29,"name":"trpD"}],"location":{"chromosome_name":"supercont5.2","end_pos":566841,"start_pos":565774,"strand":"reverse"},"name":"trp4","ortholog_annotations":[{"gene_uniquename":"SJAG_03167","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03167","ortholog_taxonid":4932,"ortholog_uniquename":"YDR354W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03167","ortholog_taxonid":4932,"ortholog_uniquename":"YDR354W","reference_uniquename":"PMID:26896847"}],"product":"phosphoribosylanthranilate transferase Trp4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004048"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0016757","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000162":null,"GO:0004048":null,"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03167.1"],"transcripts_by_uniquename":{"SJAG_03167.1":null},"uniprot_identifier":"B6K3I2","uniquename":"SJAG_03167"}


id: SJAG_03168
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104390],"is_not":false,"summary":null,"term":"GO:0007006"}],"cellular_component":[{"annotations":[104388],"is_not":false,"summary":null,"term":"GO:0005743"}]},"dbxrefs":["InterPro:IPR032435","GOA:B6K3I3","InterPro:IPR001107","EnsemblGenomes-Gn:SJAG_03168","UniProtKB/TrEMBL:B6K3I3","EnsemblGenomes-Tr:EEB08040","InterPro:IPR036013","InterPro:IPR001972"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":349,"start":322}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"kgd2","uniquename":"SJAG_03163"},{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"}],"genes_by_uniquename":{"HGNC:14559":null,"SJAG_03168":null,"SPBC16G5.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SPFH domain / Band 7 family","id":"PF01145","interpro_description":"Band 7 domain","interpro_id":"IPR001107","interpro_name":"Band_7","locations":[{"end":212,"start":44}],"match_end":212,"match_start":44,"name":"Band_7"},{"dbname":"PFAM","description":"C-terminal region of band_7","id":"PF16200","interpro_description":"STML2-like, C-terminal extension","interpro_id":"IPR032435","interpro_name":"STML2-like_C","locations":[{"end":322,"start":263}],"match_end":322,"match_start":263,"name":"Band_7_C"},{"dbname":"CDD","description":"SPFH_paraslipin","id":"cd08829","locations":[{"end":187,"start":77}],"match_end":187,"match_start":77,"name":"SPFH_paraslipin"},{"dbname":"SMART","id":"SM00244","interpro_description":"Band 7 domain","interpro_id":"IPR001107","interpro_name":"Band_7","locations":[{"end":197,"start":39}],"match_end":197,"match_start":39,"name":"PHB_4"},{"dbname":"PRINTS","description":"Stomatin signature","id":"PR00721","interpro_description":"Stomatin/HflK family","interpro_id":"IPR001972","interpro_name":"Stomatin_HflK_fam","locations":[{"end":68,"start":46},{"end":115,"start":94},{"end":213,"start":149}],"match_end":213,"match_start":46,"name":"STOMATIN"},{"dbname":"SUPERFAMILY","id":"SSF117892","interpro_description":"Band 7/SPFH domain superfamily","interpro_id":"IPR036013","interpro_name":"Band_7/SPFH_dom_sf","locations":[{"end":204,"start":71}],"match_end":204,"match_start":71,"name":"Band 7/SPFH domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.479.30","interpro_description":"Band 7/SPFH domain superfamily","interpro_id":"IPR036013","interpro_name":"Band_7/SPFH_dom_sf","locations":[{"end":199,"start":68}],"match_end":199,"match_start":68,"name":"Band 7 domain"},{"dbname":"PANTHER","id":"PTHR43327","interpro_description":"Band 7/mec-2 domain-containing protein","interpro_id":"IPR050710","interpro_name":"Band7/mec-2_domain","locations":[{"end":325,"start":38}],"match_end":325,"match_start":38,"name":"STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":349,"start":322}],"match_end":349,"match_start":322,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":349,"start":338}],"match_end":349,"match_start":338,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":568529,"start_pos":567295,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03168","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14559","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03168","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.07c","reference_uniquename":"PMID:21511999"}],"product":"stomatin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0007005","GO:0005739","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0007006":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03168.1"],"transcripts_by_uniquename":{"SJAG_03168.1":null},"uniprot_identifier":"B6K3I3","uniquename":"SJAG_03168"}


id: SJAG_03170
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71758],"is_not":false,"summary":null,"term":"GO:0090158"},{"annotations":[71759],"is_not":false,"summary":null,"term":"GO:0061817"},{"annotations":[104378],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[104379],"is_not":false,"summary":null,"term":"GO:0051685"},{"annotations":[104380],"is_not":false,"summary":null,"term":"GO:1902647"},{"annotations":[104381],"is_not":false,"summary":null,"term":"GO:0007009"},{"annotations":[104382],"is_not":false,"summary":null,"term":"GO:0061709"}],"cellular_component":[{"annotations":[104372],"is_not":false,"summary":null,"term":"GO:0160219"},{"annotations":[104374],"is_not":false,"summary":null,"term":"GO:0140268"},{"annotations":[71757],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[104383],"is_not":false,"summary":null,"term":"GO:0140506"},{"annotations":[104384],"is_not":false,"summary":null,"term":"GO:0160214"},{"annotations":[104385],"is_not":false,"summary":null,"term":"GO:0035091"},{"annotations":[104386],"is_not":false,"summary":null,"term":"GO:0001786"}],"mondo":[{"annotations":[86678],"is_not":false,"summary":null,"term":"MONDO:0008453"},{"annotations":[86602],"is_not":false,"summary":null,"term":"MONDO:0012077"}]},"dbxrefs":["GOA:B6K3I5","InterPro:IPR008962","InterPro:IPR000535","UniProtKB/TrEMBL:B6K3I5","InterPro:IPR013783","EnsemblGenomes-Tr:EEB08042","InterPro:IPR016763","EnsemblGenomes-Gn:SJAG_03170"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":267,"start":129}},{"range":{"end":346,"start":293}},{"range":{"end":485,"start":411}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"}],"genes_by_uniquename":{"HGNC:12648":null,"HGNC:12649":null,"SJAG_03170":null,"SPBC16G5.05c":null,"YBL091C-A":null,"YER120W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MSP (Major sperm protein) domain","id":"PF00635","interpro_description":"Major sperm protein (MSP) domain","interpro_id":"IPR000535","interpro_name":"MSP_dom","locations":[{"end":107,"start":2}],"match_end":107,"match_start":2,"name":"Motile_Sperm"},{"dbname":"PROSITE_PROFILES","description":"Major sperm protein (MSP) domain profile.","id":"PS50202","interpro_description":"Major sperm protein (MSP) domain","interpro_id":"IPR000535","interpro_name":"MSP_dom","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"MSP"},{"dbname":"FUNFAM","description":"Vesicle-associated protein 1-1","id":"G3DSA:2.60.40.10:FF:000813","locations":[{"end":129,"start":1}],"match_end":129,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF49354","interpro_description":"PapD-like superfamily","interpro_id":"IPR008962","interpro_name":"PapD-like_sf","locations":[{"end":129,"start":2}],"match_end":129,"match_start":2,"name":"PapD-like"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.10","interpro_description":"Immunoglobulin-like fold","interpro_id":"IPR013783","interpro_name":"Ig-like_fold","locations":[{"end":129,"start":1}],"match_end":129,"match_start":1,"name":"Immunoglobulins"},{"dbname":"PANTHER","id":"PTHR10809","interpro_description":"Vesicle-associated membrane-protein-associated protein","interpro_id":"IPR016763","interpro_name":"VAP","locations":[{"end":389,"start":4}],"match_end":389,"match_start":4,"name":"VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":267,"start":129},{"end":346,"start":293},{"end":485,"start":411}],"match_end":485,"match_start":129,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":160,"start":140},{"end":198,"start":176},{"end":224,"start":212},{"end":267,"start":243},{"end":471,"start":454}],"match_end":471,"match_start":140,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":237,"start":226},{"end":434,"start":422}],"match_end":434,"match_start":226,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":211,"start":199},{"end":341,"start":332}],"match_end":341,"match_start":199,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":175,"start":161}],"match_end":175,"match_start":161,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":572157,"start_pos":570391,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":189,"start":139}},{"range":{"end":223,"start":193}},{"range":{"end":268,"start":242}},{"range":{"end":317,"start":297}},{"range":{"end":420,"start":412}},{"range":{"end":470,"start":453}}],"name":"scs2","ortholog_annotations":[{"gene_uniquename":"SJAG_03170","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03170","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12649","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03170","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03170","ortholog_taxonid":4932,"ortholog_uniquename":"YBL091C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03170","ortholog_taxonid":4932,"ortholog_uniquename":"YER120W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03170","ortholog_taxonid":4932,"ortholog_uniquename":"YER120W","reference_uniquename":"PMID:26896847"}],"product":"VAP family protein Scs2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0035091","GO:0001786"],"not-binding":["GO:0140506","GO:0160214"]}},"subset_termids":["GO:0005886","GO:0008289","GO:0061024","GO:0006629","MONDO:0005559","GO:0007163","GO:0005789","GO:0140056","GO:0005938","GO:0005783","GO:0006914","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001786":null,"GO:0005886":null,"GO:0007009":null,"GO:0007163":null,"GO:0035091":null,"GO:0051685":null,"GO:0061709":null,"GO:0061817":null,"GO:0090158":null,"GO:0140268":null,"GO:0140506":null,"GO:0160214":null,"GO:0160219":null,"GO:1902647":null,"MONDO:0008453":null,"MONDO:0012077":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03170.1"],"transcripts_by_uniquename":{"SJAG_03170.1":null},"uniprot_identifier":"B6K3I5","uniquename":"SJAG_03170"}


id: SJAG_03171
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K3I6","EnsemblGenomes-Gn:SJAG_03171","EnsemblGenomes-Tr:EEB08043"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":98,"start":68}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"}],"genes_by_uniquename":{"SJAG_03171":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":98,"start":68}],"match_end":98,"match_start":68,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":572808,"start_pos":572512,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":83,"start":69}}],"product":"Schizosaccharomyces japonicus specific disordered protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03171.1"],"transcripts_by_uniquename":{"SJAG_03171.1":null},"uniprot_identifier":"B6K3I6","uniquename":"SJAG_03171"}


id: SJAG_03172
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109540],"is_not":false,"summary":null,"term":"GO:0120010"}],"cellular_component":[{"annotations":[109536],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[109537],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[109538],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109539],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74418],"is_not":false,"summary":null,"term":"GO:0008526"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03172","EnsemblGenomes-Tr:EEB08044","InterPro:IPR011074","UniProtKB/TrEMBL:B6K3I7","InterPro:IPR036273","InterPro:IPR001251","InterPro:IPR036865"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"}],"genes_by_uniquename":{"SJAG_03172":null,"SPBC365.01":null,"YLR380W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CRAL/TRIO domain","id":"PF00650","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":254,"start":105}],"match_end":254,"match_start":105,"name":"CRAL_TRIO"},{"dbname":"PFAM","description":"CRAL/TRIO, N-terminal domain","id":"PF03765","interpro_description":"CRAL/TRIO, N-terminal domain","interpro_id":"IPR011074","interpro_name":"CRAL/TRIO_N_dom","locations":[{"end":74,"start":21}],"match_end":74,"match_start":21,"name":"CRAL_TRIO_N"},{"dbname":"CDD","description":"SEC14","id":"cd00170","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":255,"start":104}],"match_end":255,"match_start":104,"name":"SEC14"},{"dbname":"PROSITE_PROFILES","description":"CRAL-TRIO lipid binding domain profile.","id":"PS50191","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":260,"start":96}],"match_end":260,"match_start":96,"name":"CRAL_TRIO"},{"dbname":"SMART","id":"SM00516","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":257,"start":99}],"match_end":257,"match_start":99,"name":"sec14_4"},{"dbname":"SMART","id":"SM01100","interpro_description":"CRAL/TRIO, N-terminal domain","interpro_id":"IPR011074","interpro_name":"CRAL/TRIO_N_dom","locations":[{"end":76,"start":51}],"match_end":76,"match_start":51,"name":"CRAL_TRIO_N_2"},{"dbname":"SUPERFAMILY","id":"SSF52087","interpro_description":"CRAL-TRIO lipid binding domain superfamily","interpro_id":"IPR036865","interpro_name":"CRAL-TRIO_dom_sf","locations":[{"end":257,"start":100}],"match_end":257,"match_start":100,"name":"CRAL/TRIO domain"},{"dbname":"SUPERFAMILY","id":"SSF46938","interpro_description":"CRAL/TRIO, N-terminal domain superfamily","interpro_id":"IPR036273","interpro_name":"CRAL/TRIO_N_dom_sf","locations":[{"end":89,"start":45}],"match_end":89,"match_start":45,"name":"CRAL/TRIO N-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.525.10","interpro_description":"CRAL-TRIO lipid binding domain superfamily","interpro_id":"IPR036865","interpro_name":"CRAL-TRIO_dom_sf","locations":[{"end":278,"start":22}],"match_end":278,"match_start":22},{"dbname":"PANTHER","id":"PTHR46590","interpro_description":"Phosphatidylinositol transfer protein/CRAL-TRIO domain","interpro_id":"IPR052432","interpro_name":"PITP/CRAL-TRIO","locations":[{"end":360,"start":28}],"match_end":360,"match_start":28,"name":"PHOSPHATIDYLINOSITOL TRANSFER PROTEIN CSR1-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":574359,"start_pos":573124,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":54,"start":41}}],"name":"csr103","ortholog_annotations":[{"gene_uniquename":"SJAG_03172","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC365.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03172","ortholog_taxonid":4932,"ortholog_uniquename":"YLR380W","reference_uniquename":"PMID:29761456"}],"product":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr103","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008526"]}},"subset_termids":["GO:0120013","GO:0005634","GO:0061024","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008526":null,"GO:0032153":null,"GO:0051286":null,"GO:0120010":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03172.1"],"transcripts_by_uniquename":{"SJAG_03172.1":null},"uniprot_identifier":"B6K3I7","uniquename":"SJAG_03172"}


id: SJAG_03173
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78209],"is_not":false,"summary":null,"term":"GO:0006784"}],"cellular_component":[{"annotations":[109542],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[78208],"is_not":false,"summary":null,"term":"GO:0008495"}],"mondo":[{"annotations":[85696],"is_not":false,"summary":null,"term":"MONDO:0033635"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3I8","InterPro:IPR000537","GOA:B6K3I8","EnsemblGenomes-Gn:SJAG_03173","InterPro:IPR006369","InterPro:IPR016315","EnsemblGenomes-Tr:EEB08045","InterPro:IPR030470"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"}],"genes_by_uniquename":{"HGNC:2260":null,"SJAG_03173":null,"SPBC365.02c":null,"YPL172C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"UbiA prenyltransferase family","id":"PF01040","interpro_description":"UbiA prenyltransferase","interpro_id":"IPR000537","interpro_name":"UbiA_prenyltransferase","locations":[{"end":337,"start":88}],"match_end":337,"match_start":88,"name":"UbiA"},{"dbname":"CDD","description":"PT_UbiA_Cox10","id":"cd13957","interpro_description":"Protohaem IX farnesyltransferase","interpro_id":"IPR006369","interpro_name":"Protohaem_IX_farnesylTrfase","locations":[{"end":347,"start":77}],"match_end":347,"match_start":77,"name":"PT_UbiA_Cox10"},{"dbname":"PROSITE_PATTERNS","description":"UbiA prenyltransferase family signature.","id":"PS00943","interpro_description":"UbiA prenyltransferase conserved site","interpro_id":"IPR030470","interpro_name":"UbiA_prenylTrfase_CS","locations":[{"end":149,"start":127}],"match_end":149,"match_start":127,"name":"UBIA"},{"dbname":"GENE3D","id":"G3DSA:1.10.357.140","interpro_description":"UbiA prenyltransferase superfamily","interpro_id":"IPR044878","interpro_name":"UbiA_sf","locations":[{"end":228,"start":81}],"match_end":228,"match_start":81,"name":"UbiA prenyltransferase"},{"dbname":"PANTHER","id":"PTHR43448","interpro_description":"Protohaem IX farnesyltransferase","interpro_id":"IPR006369","interpro_name":"Protohaem_IX_farnesylTrfase","locations":[{"end":355,"start":69}],"match_end":355,"match_start":69,"name":"PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL"},{"dbname":"HAMAP","description":"Protoheme IX farnesyltransferase [cyoE].","id":"MF_00154","interpro_description":"Protohaem IX farnesyltransferase","interpro_id":"IPR006369","interpro_name":"Protohaem_IX_farnesylTrfase","locations":[{"end":353,"start":72}],"match_end":353,"match_start":72,"name":"CyoE_CtaB"},{"dbname":"NCBIFAM","description":"heme o synthase","id":"TIGR01473","interpro_description":"Protohaem IX farnesyltransferase","interpro_id":"IPR006369","interpro_name":"Protohaem_IX_farnesylTrfase","locations":[{"end":351,"start":76}],"match_end":351,"match_start":76,"name":"cyoE_ctaB"}],"location":{"chromosome_name":"supercont5.2","end_pos":575706,"start_pos":574522,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":121,"start":102}}],"name":"cox10","ortholog_annotations":[{"gene_uniquename":"SJAG_03173","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2260","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03173","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC365.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03173","ortholog_taxonid":4932,"ortholog_uniquename":"YPL172C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03173","ortholog_taxonid":4932,"ortholog_uniquename":"YPL172C","reference_uniquename":"PMID:26896847"}],"product":"protoheme IX farnesyltransferase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008495"]}},"subset_termids":["MONDO:0004069","GO:0033013","GO:0005739","MONDO:0005066","GO:0016765"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006784":null,"GO:0008495":null,"MONDO:0033635":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":192,"start":170}},{"assigned_by":"TMHMM","range":{"end":221,"start":199}},{"assigned_by":"TMHMM","range":{"end":313,"start":291}},{"assigned_by":"TMHMM","range":{"end":354,"start":333}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03173.1"],"transcripts_by_uniquename":{"SJAG_03173.1":null},"uniprot_identifier":"B6K3I8","uniquename":"SJAG_03173"}


id: SJAG_03174
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":262,"start":262}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":13,"start":11}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":45,"start":41}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":146,"start":146}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":190,"start":190}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":234,"start":229}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":256,"start":256}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":258,"start":258}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":262,"start":261}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":262,"start":262}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":292,"start":292}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":295,"start":295}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":297,"start":297}},{"assigned_by":"UniProtKB","ligand":"K(+)","range":{"end":301,"start":301}}],"cv_annotations":{"biological_process":[{"annotations":[58553],"is_not":false,"summary":null,"term":"GO:0019303"}],"cellular_component":[{"annotations":[104355],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[58550],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[58551],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[58547],"is_not":false,"summary":null,"term":"GO:0004747"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03174","EnsemblGenomes-Tr:EEB08046","InterPro:IPR029056","GOA:B6K3I9","InterPro:IPR002139","InterPro:IPR002173","InterPro:IPR011611","UniProtKB/TrEMBL:B6K3I9","InterPro:IPR011877"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"}],"genes_by_uniquename":{"HGNC:30325":null,"SJAG_03174":null,"SPBC16G5.02c":null,"YCR036W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"pfkB family carbohydrate kinase","id":"PF00294","interpro_description":"Carbohydrate kinase PfkB","interpro_id":"IPR011611","interpro_name":"PfkB_dom","locations":[{"end":304,"start":1}],"match_end":304,"match_start":1,"name":"PfkB"},{"dbname":"CDD","description":"ribokinase","id":"cd01174","interpro_description":"Ribokinase","interpro_id":"IPR011877","interpro_name":"D_ribokin","locations":[{"end":304,"start":3}],"match_end":304,"match_start":3,"name":"ribokinase"},{"dbname":"PROSITE_PATTERNS","description":"pfkB family of carbohydrate kinases signature 2.","id":"PS00584","interpro_description":"Carbohydrate/purine kinase, PfkB, conserved site","interpro_id":"IPR002173","interpro_name":"Carboh/pur_kinase_PfkB_CS","locations":[{"end":269,"start":256}],"match_end":269,"match_start":256,"name":"PFKB_KINASES_2"},{"dbname":"PRINTS","description":"Ribokinase signature","id":"PR00990","interpro_description":"Ribokinase/fructokinase","interpro_id":"IPR002139","interpro_name":"Ribo/fructo_kinase","locations":[{"end":27,"start":6},{"end":54,"start":35},{"end":124,"start":111},{"end":194,"start":179},{"end":237,"start":226}],"match_end":237,"match_start":6,"name":"RIBOKINASE"},{"dbname":"SUPERFAMILY","id":"SSF53613","interpro_description":"Ribokinase-like","interpro_id":"IPR029056","interpro_name":"Ribokinase-like","locations":[{"end":310,"start":1}],"match_end":310,"match_start":1,"name":"Ribokinase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1190.20","interpro_description":"Ribokinase-like","interpro_id":"IPR029056","interpro_name":"Ribokinase-like","locations":[{"end":311,"start":1}],"match_end":311,"match_start":1},{"dbname":"PANTHER","id":"PTHR10584","locations":[{"end":309,"start":4}],"match_end":309,"match_start":4,"name":"SUGAR KINASE"},{"dbname":"HAMAP","description":"Ribokinase [rbsK].","id":"MF_01987","interpro_description":"Ribokinase","interpro_id":"IPR011877","interpro_name":"D_ribokin","locations":[{"end":310,"start":2}],"match_end":310,"match_start":2,"name":"Ribokinase"},{"dbname":"NCBIFAM","description":"ribokinase","id":"TIGR02152","interpro_description":"Ribokinase","interpro_id":"IPR011877","interpro_name":"D_ribokin","locations":[{"end":309,"start":4}],"match_end":309,"match_start":4,"name":"D_ribokin_bact"}],"location":{"chromosome_name":"supercont5.2","end_pos":577144,"start_pos":576206,"strand":"reverse"},"name":"rbk1","ortholog_annotations":[{"gene_uniquename":"SJAG_03174","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30325","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03174","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03174","ortholog_taxonid":4932,"ortholog_uniquename":"YCR036W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03174","ortholog_taxonid":4932,"ortholog_uniquename":"YCR036W","reference_uniquename":"PMID:26896847"}],"product":"ribokinase Rbk1","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004747"]}},"subset_termids":["GO:0016301","GO:0005975","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004747":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0019303":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03174.1"],"transcripts_by_uniquename":{"SJAG_03174.1":null},"uniprot_identifier":"B6K3I9","uniquename":"SJAG_03174"}


id: SJAG_03175
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104362],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[104360],"is_not":false,"summary":null,"term":"GO:0005741"},{"annotations":[104361],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[104363],"is_not":false,"summary":null,"term":"GO:0061665"},{"annotations":[104364],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[61941],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08047","InterPro:IPR001841","InterPro:IPR013083","UniProtKB/TrEMBL:B6K3J0","EnsemblGenomes-Gn:SJAG_03175","GOA:B6K3J0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":287,"start":267}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"}],"genes_by_uniquename":{"SJAG_03175":null,"SPBC16G5.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ring finger domain","id":"PF13639","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":66,"start":26}],"match_end":66,"match_start":26,"name":"zf-RING_2"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":66,"start":26}],"match_end":66,"match_start":26,"name":"ZF_RING_2"},{"dbname":"SMART","id":"SM00184","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":65,"start":26}],"match_end":65,"match_start":26,"name":"ring_2"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":73,"start":20}],"match_end":73,"match_start":20,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":87,"start":20}],"match_end":87,"match_start":20,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR46077","locations":[{"end":241,"start":17}],"match_end":241,"match_start":17,"name":"E3 UBIQUITIN-PROTEIN LIGASE TOPORS"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":287,"start":267}],"match_end":287,"match_start":267,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":287,"start":277}],"match_end":287,"match_start":277,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":578411,"start_pos":577548,"strand":"forward"},"name":"mrz1","ortholog_annotations":[{"gene_uniquename":"SJAG_03175","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.03","reference_uniquename":"PMID:21511999"}],"product":"ubiquitin-protein ligase E3/SUMO transferase, Topors, possibly associated with DNA damage","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061665","GO:0061630"]}},"subset_termids":["GO:0005739","GO:0016746","GO:0140096","GO:0005634","GO:0030163","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005741":null,"GO:0008270":null,"GO:0043161":null,"GO:0061630":null,"GO:0061665":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03175.1"],"transcripts_by_uniquename":{"SJAG_03175.1":null},"uniprot_identifier":"B6K3J0","uniquename":"SJAG_03175"}


id: SJAG_03176
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104368],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[79146],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[79144],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[79145],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08048","GOA:B6K3J1","EnsemblGenomes-Gn:SJAG_03176","InterPro:IPR005822","InterPro:IPR005823","UniProtKB/TrEMBL:B6K3J1","InterPro:IPR036899"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"}],"genes_by_uniquename":{"HGNC:14278":null,"SJAG_03176":null,"SPBC16G5.04":null,"YOR150W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L13","id":"PF00572","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":133,"start":14}],"match_end":133,"match_start":14,"name":"Ribosomal_L13"},{"dbname":"CDD","description":"Ribosomal_L13","id":"cd00392","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":130,"start":16}],"match_end":130,"match_start":16,"name":"Ribosomal_L13"},{"dbname":"SUPERFAMILY","id":"SSF52161","interpro_description":"Large ribosomal subunit protein uL13 superfamily","interpro_id":"IPR036899","interpro_name":"Ribosomal_uL13_sf","locations":[{"end":135,"start":12}],"match_end":135,"match_start":12,"name":"Ribosomal protein L13"},{"dbname":"GENE3D","id":"G3DSA:3.90.1180.10","interpro_description":"Large ribosomal subunit protein uL13 superfamily","interpro_id":"IPR036899","interpro_name":"Ribosomal_uL13_sf","locations":[{"end":157,"start":1}],"match_end":157,"match_start":1,"name":"Ribosomal protein L13"},{"dbname":"PANTHER","id":"PTHR11545","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":143,"start":8}],"match_end":143,"match_start":8,"name":"RIBOSOMAL PROTEIN L13"},{"dbname":"PIRSF","id":"PIRSF002181","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":162,"start":1}],"match_end":162,"match_start":1,"name":"RPL13p_RPL13Aa_RPL16e_RPL13o"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL13 [rplM].","id":"MF_01366","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":165,"start":16}],"match_end":165,"match_start":16,"name":"Ribosomal_L13"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L13","id":"TIGR01066","interpro_description":"Large ribosomal subunit protein uL13, bacterial-type","interpro_id":"IPR005823","interpro_name":"Ribosomal_uL13_bac-type","locations":[{"end":136,"start":8}],"match_end":136,"match_start":8,"name":"rplM_bact"}],"location":{"chromosome_name":"supercont5.2","end_pos":579264,"start_pos":578723,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":125,"start":112}}],"name":"mrpl23","ortholog_annotations":[{"gene_uniquename":"SJAG_03176","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14278","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03176","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03176","ortholog_taxonid":4932,"ortholog_uniquename":"YOR150W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03176","ortholog_taxonid":4932,"ortholog_uniquename":"YOR150W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L13","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03176.1"],"transcripts_by_uniquename":{"SJAG_03176.1":null},"uniprot_identifier":"B6K3J1","uniquename":"SJAG_03176"}


id: SJAG_03178
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":296,"start":19}}],"cv_annotations":{"sequence":[{"annotations":[80503],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08049","EnsemblGenomes-Gn:SJAG_03178","UniProtKB/TrEMBL:B6K3J2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"}],"genes_by_uniquename":{"SJAG_03178":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":581382,"start_pos":580492,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":48,"start":37}},{"range":{"end":174,"start":76}},{"range":{"end":266,"start":252}},{"range":{"end":281,"start":274}}],"product":"Schizosaccharomyces japonicus specific serine/threonine rich protein","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03178.1"],"transcripts_by_uniquename":{"SJAG_03178.1":null},"uniprot_identifier":"B6K3J2","uniquename":"SJAG_03178"}


id: SJAG_03179
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97230],"is_not":false,"summary":null,"term":"GO:0000467"},{"annotations":[97231],"is_not":false,"summary":null,"term":"GO:0070651"},{"annotations":[97232],"is_not":false,"summary":null,"term":"GO:0071031"},{"annotations":[97233],"is_not":false,"summary":null,"term":"GO:0071042"},{"annotations":[97234],"is_not":false,"summary":null,"term":"GO:0071035"},{"annotations":[97236],"is_not":false,"summary":null,"term":"GO:0070478"},{"annotations":[97237],"is_not":false,"summary":null,"term":"GO:0070481"},{"annotations":[76110],"is_not":false,"summary":null,"term":"GO:0071051"},{"annotations":[97239],"is_not":false,"summary":null,"term":"GO:0030847"},{"annotations":[97240],"is_not":false,"summary":null,"term":"GO:0071038"},{"annotations":[76106],"is_not":false,"summary":null,"term":"GO:0034475"}],"cellular_component":[{"annotations":[97223],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[76108],"is_not":false,"summary":null,"term":"GO:0000177"},{"annotations":[97225],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76107],"is_not":false,"summary":null,"term":"GO:0000176"},{"annotations":[76104],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[76105],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR027408","EnsemblGenomes-Tr:EEB08050","InterPro:IPR036345","InterPro:IPR020568","EnsemblGenomes-Gn:SJAG_03179","GOA:B6K3J3","UniProtKB/TrEMBL:B6K3J3","InterPro:IPR001247","InterPro:IPR015847"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"}],"genes_by_uniquename":{"HGNC:18189":null,"SJAG_03179":null,"SPAC3G9.10c":null,"YGR195W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"3' exoribonuclease family, domain 2","id":"PF03725","interpro_description":"Exoribonuclease, phosphorolytic domain 2","interpro_id":"IPR015847","interpro_name":"ExoRNase_PH_dom2","locations":[{"end":217,"start":154}],"match_end":217,"match_start":154,"name":"RNase_PH_C"},{"dbname":"PFAM","description":"3' exoribonuclease family, domain 1","id":"PF01138","interpro_description":"Exoribonuclease, phosphorolytic domain 1","interpro_id":"IPR001247","interpro_name":"ExoRNase_PH_dom1","locations":[{"end":150,"start":21}],"match_end":150,"match_start":21,"name":"RNase_PH"},{"dbname":"CDD","description":"RNase_PH_RRP41","id":"cd11370","locations":[{"end":235,"start":11}],"match_end":235,"match_start":11,"name":"RNase_PH_RRP41"},{"dbname":"FUNFAM","description":"Exosome complex component Rrp41","id":"G3DSA:3.30.230.70:FF:000004","locations":[{"end":240,"start":4}],"match_end":240,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":178,"start":5}],"match_end":178,"match_start":5,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"SUPERFAMILY","id":"SSF55666","interpro_description":"Exoribonuclease, PH domain 2 superfamily","interpro_id":"IPR036345","interpro_name":"ExoRNase_PH_dom2_sf","locations":[{"end":236,"start":152}],"match_end":236,"match_start":152,"name":"Ribonuclease PH domain 2-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.230.70","interpro_description":"PNPase/RNase PH domain superfamily","interpro_id":"IPR027408","interpro_name":"PNPase/RNase_PH_dom_sf","locations":[{"end":240,"start":1}],"match_end":240,"match_start":1},{"dbname":"PANTHER","id":"PTHR11953","interpro_description":"Ribonuclease PH","interpro_id":"IPR050080","interpro_name":"RNase_PH","locations":[{"end":227,"start":13}],"match_end":227,"match_start":13,"name":"EXOSOME COMPLEX COMPONENT"}],"location":{"chromosome_name":"supercont5.2","end_pos":583050,"start_pos":582120,"strand":"reverse"},"name":"rrp41","ortholog_annotations":[{"gene_uniquename":"SJAG_03179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03179","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3G9.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03179","ortholog_taxonid":4932,"ortholog_uniquename":"YGR195W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03179","ortholog_taxonid":4932,"ortholog_uniquename":"YGR195W","reference_uniquename":"PMID:26896847"}],"product":"exosome subunit Rrp41","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005694","GO:0016074","GO:0016071","GO:0006399","GO:0006351","GO:0005829","GO:0005730","GO:0016073","GO:0005634","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000467":null,"GO:0000785":null,"GO:0003723":null,"GO:0005730":null,"GO:0005829":null,"GO:0030847":null,"GO:0034475":null,"GO:0070478":null,"GO:0070481":null,"GO:0070651":null,"GO:0071031":null,"GO:0071035":null,"GO:0071038":null,"GO:0071042":null,"GO:0071051":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03179.1"],"transcripts_by_uniquename":{"SJAG_03179.1":null},"uniprot_identifier":"B6K3J3","uniquename":"SJAG_03179"}


id: SJAG_03180
data:
  {"cv_annotations":{"biological_process":[{"annotations":[67499],"is_not":false,"summary":null,"term":"GO:0006633"}],"cellular_component":[{"annotations":[97300],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[67498],"is_not":false,"summary":null,"term":"GO:0008897"},{"annotations":[67497],"is_not":false,"summary":null,"term":"GO:0000287"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08051","EnsemblGenomes-Gn:SJAG_03180","GOA:B6K3J4","InterPro:IPR004568","InterPro:IPR037143","InterPro:IPR008278","UniProtKB/TrEMBL:B6K3J4","InterPro:IPR002582"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rbk1","uniquename":"SJAG_03174"},{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"}],"genes_by_uniquename":{"SJAG_03180":null,"SPAC3G9.17":null,"YPL148C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"4'-phosphopantetheinyl transferase superfamily","id":"PF01648","interpro_description":"4'-phosphopantetheinyl transferase domain","interpro_id":"IPR008278","interpro_name":"4-PPantetheinyl_Trfase_dom","locations":[{"end":124,"start":2}],"match_end":124,"match_start":2,"name":"ACPS"},{"dbname":"SUPERFAMILY","id":"SSF56214","interpro_description":"4'-phosphopantetheinyl transferase domain superfamily","interpro_id":"IPR037143","interpro_name":"4-PPantetheinyl_Trfase_dom_sf","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"4'-phosphopantetheinyl transferase"},{"dbname":"GENE3D","id":"G3DSA:3.90.470.20","interpro_description":"4'-phosphopantetheinyl transferase domain superfamily","interpro_id":"IPR037143","interpro_name":"4-PPantetheinyl_Trfase_dom_sf","locations":[{"end":127,"start":1}],"match_end":127,"match_start":1},{"dbname":"HAMAP","description":"Holo-[acyl-carrier-protein] synthase [acpS].","id":"MF_00101","interpro_description":"Holo-[acyl carrier protein] synthase","interpro_id":"IPR002582","interpro_name":"ACPS","locations":[{"end":128,"start":1}],"match_end":128,"match_start":1,"name":"AcpS"},{"dbname":"NCBIFAM","description":"phosphopantetheine--protein transferase domain","id":"TIGR00556","interpro_description":"Phosphopantetheine-protein transferase domain","interpro_id":"IPR004568","interpro_name":"Ppantetheine-prot_Trfase_dom","locations":[{"end":125,"start":1}],"match_end":125,"match_start":1,"name":"pantethn_trn"}],"location":{"chromosome_name":"supercont5.2","end_pos":583713,"start_pos":583227,"strand":"forward"},"name":"ppt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03180","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3G9.17","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03180","ortholog_taxonid":4932,"ortholog_uniquename":"YPL148C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial holo-[acyl-carrier-protein] synthase Ppt2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287"],"not-binding":["GO:0008897"]}},"subset_termids":["GO:0006629","GO:0005739","GO:0016780"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0005759":null,"GO:0006633":null,"GO:0008897":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03180.1"],"transcripts_by_uniquename":{"SJAG_03180.1":null},"uniprot_identifier":"B6K3J4","uniquename":"SJAG_03180"}


id: SJAG_03181
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62925],"is_not":false,"summary":null,"term":"GO:0006383"}],"cellular_component":[{"annotations":[116477],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74799],"is_not":false,"summary":null,"term":"GO:0005666"}],"molecular_function":[{"annotations":[116481],"is_not":false,"summary":null,"term":"GO:0003899"}],"mondo":[{"annotations":[86937],"is_not":false,"summary":null,"term":"MONDO:0030813"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3J5","EnsemblGenomes-Gn:SJAG_03181","InterPro:IPR036388","GOA:B6K3J5","EnsemblGenomes-Tr:EEB08052","InterPro:IPR007832","InterPro:IPR016049","InterPro:IPR036390"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrz1","uniquename":"SJAG_03175"},{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"}],"genes_by_uniquename":{"HGNC:15763":null,"SJAG_03181":null,"SPCC290.02":null,"YNR003C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerase Rpc34 subunit","id":"PF05158","interpro_description":"RNA polymerase Rpc34","interpro_id":"IPR007832","interpro_name":"RNA_pol_Rpc34","locations":[{"end":300,"start":4}],"match_end":300,"match_start":4,"name":"RNA_pol_Rpc34"},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerase III subunit RPC6","id":"G3DSA:1.10.10.10:FF:000116","locations":[{"end":149,"start":84}],"match_end":149,"match_start":84},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":150,"start":76}],"match_end":150,"match_start":76,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":71,"start":10},{"end":149,"start":84}],"match_end":149,"match_start":10},{"dbname":"PANTHER","id":"PTHR12780","interpro_description":"RNA polymerase Rpc34-like","interpro_id":"IPR016049","interpro_name":"RNA_pol_Rpc34-like","locations":[{"end":300,"start":5}],"match_end":300,"match_start":5,"name":"RNA POLYMERASE III  DNA DIRECTED , 39KD SUBUNIT-RELATED"},{"dbname":"PIRSF","id":"PIRSF028763","interpro_description":"RNA polymerase Rpc34","interpro_id":"IPR007832","interpro_name":"RNA_pol_Rpc34","locations":[{"end":301,"start":4}],"match_end":301,"match_start":4,"name":"RNAP3_C34/C39"}],"location":{"chromosome_name":"supercont5.2","end_pos":585440,"start_pos":584443,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":60,"start":48}}],"name":"rpc34","ortholog_annotations":[{"gene_uniquename":"SJAG_03181","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15763","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03181","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC290.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03181","ortholog_taxonid":4932,"ortholog_uniquename":"YNR003C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03181","ortholog_taxonid":4932,"ortholog_uniquename":"YNR003C","reference_uniquename":"PMID:26896847"}],"product":"DNA-directed RNA polymerase III complex subunit Rpc34","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003899"]}},"subset_termids":["MONDO:0005046","GO:0005829","GO:0016779","GO:0005634","GO:0140098","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003899":null,"GO:0005666":null,"GO:0005829":null,"GO:0006383":null,"MONDO:0030813":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03181.1"],"transcripts_by_uniquename":{"SJAG_03181.1":null},"uniprot_identifier":"B6K3J5","uniquename":"SJAG_03181"}


id: SJAG_03182
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76181],"is_not":false,"summary":null,"term":"GO:0006999"},{"annotations":[64554],"is_not":false,"summary":null,"term":"GO:0006913"}],"cellular_component":[{"annotations":[116482],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116484],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[76182],"is_not":false,"summary":null,"term":"GO:0044611"}],"molecular_function":[{"annotations":[76180],"is_not":false,"summary":null,"term":"GO:0017056"}],"mondo":[{"annotations":[85789],"is_not":false,"summary":null,"term":"MONDO:0014818"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08053","GOA:B6K3J6","EnsemblGenomes-Gn:SJAG_03182","InterPro:IPR016024","InterPro:IPR021827","UniProtKB/TrEMBL:B6K3J6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl23","uniquename":"SJAG_03176"},{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"}],"genes_by_uniquename":{"HGNC:18658":null,"SJAG_03182":null,"SPCC290.03c":null,"YJL039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nuclear pore complex scaffold, nucleoporins 186/192/205","id":"PF11894","interpro_description":"Nucleoporin Nup186/Nup192/Nup205","interpro_id":"IPR021827","interpro_name":"Nup186/Nup192/Nup205","locations":[{"end":1552,"start":4}],"match_end":1552,"match_start":4,"name":"Nup192"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":643,"start":579},{"end":731,"start":695},{"end":945,"start":853},{"end":1012,"start":995},{"end":1085,"start":1067},{"end":1158,"start":1139},{"end":1352,"start":1274}],"match_end":1352,"match_start":579,"name":"ARM repeat"},{"dbname":"PANTHER","id":"PTHR31344","interpro_description":"Nucleoporin Nup186/Nup192/Nup205","interpro_id":"IPR021827","interpro_name":"Nup186/Nup192/Nup205","locations":[{"end":1584,"start":29}],"match_end":1584,"match_start":29,"name":"NUCLEAR PORE COMPLEX PROTEIN NUP205"}],"location":{"chromosome_name":"supercont5.2","end_pos":590582,"start_pos":585636,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":150,"start":139}},{"range":{"end":828,"start":813}},{"range":{"end":1517,"start":1505}}],"name":"nup186","ortholog_annotations":[{"gene_uniquename":"SJAG_03182","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18658","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03182","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC290.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03182","ortholog_taxonid":4932,"ortholog_uniquename":"YJL039C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03182","ortholog_taxonid":4932,"ortholog_uniquename":"YJL039C","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Nup186","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0017056"]}},"subset_termids":["GO:0005198","MONDO:0005240","GO:0005829","GO:0005634","GO:0006913","GO:0005643","GO:0034399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006913":null,"GO:0006999":null,"GO:0017056":null,"GO:0034399":null,"GO:0044611":null,"MONDO:0014818":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03182.1"],"transcripts_by_uniquename":{"SJAG_03182.1":null},"uniprot_identifier":"B6K3J6","uniquename":"SJAG_03182"}


id: SJAG_03183
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116494],"is_not":false,"summary":null,"term":"GO:0034080"},{"annotations":[116495],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[116491],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[116492],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[116493],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[116496],"is_not":false,"summary":null,"term":"GO:0019237"},{"annotations":[116497],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[116498],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[64550],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08054","InterPro:IPR000679","GOA:B6K3J7","InterPro:IPR013088","EnsemblGenomes-Gn:SJAG_03183","InterPro:IPR042403","UniProtKB/TrEMBL:B6K3J7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":164,"start":144}},{"range":{"end":253,"start":224}},{"range":{"end":480,"start":420}},{"range":{"end":589,"start":565}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03178"},{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"}],"genes_by_uniquename":{"SJAG_03183":null,"SPCC290.04":null,"YMR179W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GATA zinc finger","id":"PF00320","interpro_description":"Zinc finger, GATA-type","interpro_id":"IPR000679","interpro_name":"Znf_GATA","locations":[{"end":372,"start":338}],"match_end":372,"match_start":338,"name":"GATA"},{"dbname":"CDD","description":"ZnF_GATA","id":"cd00202","interpro_description":"Zinc finger, GATA-type","interpro_id":"IPR000679","interpro_name":"Znf_GATA","locations":[{"end":382,"start":338}],"match_end":382,"match_start":338,"name":"ZnF_GATA"},{"dbname":"PROSITE_PATTERNS","description":"GATA-type zinc finger domain.","id":"PS00344","interpro_description":"Zinc finger, GATA-type","interpro_id":"IPR000679","interpro_name":"Znf_GATA","locations":[{"end":365,"start":338}],"match_end":365,"match_start":338,"name":"GATA_ZN_FINGER_1"},{"dbname":"PROSITE_PROFILES","description":"GATA-type zinc finger domain profile.","id":"PS50114","interpro_description":"Zinc finger, GATA-type","interpro_id":"IPR000679","interpro_name":"Znf_GATA","locations":[{"end":377,"start":338}],"match_end":377,"match_start":338,"name":"GATA_ZN_FINGER_2"},{"dbname":"SMART","id":"SM00401","interpro_description":"Zinc finger, GATA-type","interpro_id":"IPR000679","interpro_name":"Znf_GATA","locations":[{"end":385,"start":332}],"match_end":385,"match_start":332,"name":"GATA_3"},{"dbname":"FUNFAM","description":"Similar to transcription factor Zn, GATA","id":"G3DSA:3.30.50.10:FF:000059","locations":[{"end":394,"start":333}],"match_end":394,"match_start":333},{"dbname":"SUPERFAMILY","id":"SSF57716","locations":[{"end":384,"start":329}],"match_end":384,"match_start":329,"name":"Glucocorticoid receptor-like (DNA-binding domain)"},{"dbname":"GENE3D","id":"G3DSA:3.30.50.10","interpro_description":"Zinc finger, NHR/GATA-type","interpro_id":"IPR013088","interpro_name":"Znf_NHR/GATA","locations":[{"end":386,"start":333}],"match_end":386,"match_start":333},{"dbname":"PANTHER","id":"PTHR39147","interpro_description":"Spt21/Ams2","interpro_id":"IPR042403","interpro_name":"Spt21/Ams2","locations":[{"end":677,"start":213}],"match_end":677,"match_start":213,"name":"PROTEIN SPT21"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":164,"start":144},{"end":253,"start":224},{"end":480,"start":420},{"end":589,"start":565}],"match_end":589,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":459,"start":443},{"end":589,"start":577}],"match_end":589,"match_start":443,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":429,"start":420}],"match_end":429,"match_start":420,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":593319,"start_pos":591239,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":170,"start":157}},{"range":{"end":207,"start":195}}],"name":"ams2","ortholog_annotations":[{"gene_uniquename":"SJAG_03183","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC290.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03183","ortholog_taxonid":4932,"ortholog_uniquename":"YMR179W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor for histones, zf-GATA-type Ams2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978","GO:0008270","GO:0019237"],"not-binding":["GO:0001228"]}},"subset_termids":["GO:0006325","GO:0005694","GO:0005634","GO:0006351","GO:0006355","GO:0003700","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0008270":null,"GO:0019237":null,"GO:0034080":null,"GO:0034506":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03183.1"],"transcripts_by_uniquename":{"SJAG_03183.1":null},"uniprot_identifier":"B6K3J7","uniquename":"SJAG_03183"}


id: SJAG_03185
data:
  {"cv_annotations":{"biological_process":[{"annotations":[117103],"is_not":false,"summary":null,"term":"GO:0071470"},{"annotations":[117104],"is_not":false,"summary":null,"term":"GO:1903753"}],"cellular_component":[{"annotations":[117101],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71303],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[58893],"is_not":false,"summary":null,"term":"GO:0043169"},{"annotations":[117106],"is_not":false,"summary":null,"term":"GO:1990439"}]},"dbxrefs":["GOA:B6K3J8","InterPro:IPR000222","EnsemblGenomes-Tr:EEB08055","UniProtKB/TrEMBL:B6K3J8","InterPro:IPR015655","InterPro:IPR001932","InterPro:IPR036457","EnsemblGenomes-Gn:SJAG_03185"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp41","uniquename":"SJAG_03179"},{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"}],"genes_by_uniquename":{"HGNC:16381":null,"SJAG_03185":null,"SPCC4F11.02":null,"YDL006W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase 2C","id":"PF00481","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":314,"start":71}],"match_end":314,"match_start":71,"name":"PP2C"},{"dbname":"CDD","description":"PP2Cc","id":"cd00143","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":321,"start":70}],"match_end":321,"match_start":70,"name":"PP2Cc"},{"dbname":"PROSITE_PATTERNS","description":"PPM-type phosphatase domain signature.","id":"PS01032","interpro_description":"PPM-type phosphatase, divalent cation binding","interpro_id":"IPR000222","interpro_name":"PP2C_BS","locations":[{"end":110,"start":102}],"match_end":110,"match_start":102,"name":"PPM_1"},{"dbname":"PROSITE_PROFILES","description":"PPM-type phosphatase domain profile.","id":"PS51746","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":321,"start":69}],"match_end":321,"match_start":69,"name":"PPM_2"},{"dbname":"SMART","id":"SM00332","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":319,"start":57}],"match_end":319,"match_start":57,"name":"PP2C_4"},{"dbname":"SUPERFAMILY","id":"SSF81606","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":322,"start":62}],"match_end":322,"match_start":62,"name":"PP2C-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.40.10","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":344,"start":62}],"match_end":344,"match_start":62},{"dbname":"PANTHER","id":"PTHR13832","interpro_description":"Protein phosphatase 2C","interpro_id":"IPR015655","interpro_name":"PP2C","locations":[{"end":318,"start":63}],"match_end":318,"match_start":63,"name":"PROTEIN PHOSPHATASE 2C"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":1}],"match_end":69,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":19,"start":8},{"end":69,"start":56}],"match_end":69,"match_start":8,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":51,"start":36}],"match_end":51,"match_start":36,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":595367,"start_pos":594327,"strand":"forward"},"name":"ptc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03185","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16381","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03185","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC4F11.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03185","ortholog_taxonid":4932,"ortholog_uniquename":"YDL006W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03185","ortholog_taxonid":4932,"ortholog_uniquename":"YDL006W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043169"],"not-binding":["GO:1990439"]}},"subset_termids":["GO:0005634","GO:0023052","GO:0016788","GO:0004721","GO:0005829","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0043169":null,"GO:0071470":null,"GO:1903753":null,"GO:1990439":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03185.1"],"transcripts_by_uniquename":{"SJAG_03185.1":null},"uniprot_identifier":"B6K3J8","uniquename":"SJAG_03185"}


id: SJAG_03186
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[117109],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[117110],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03186","EnsemblGenomes-Tr:EEB08056","UniProtKB/TrEMBL:B6K3J9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":93,"start":67}},{"range":{"end":226,"start":153}},{"range":{"end":284,"start":262}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppt2","uniquename":"SJAG_03180"},{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"}],"genes_by_uniquename":{"SJAG_03186":null,"SPCC4F11.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":93,"start":67},{"end":226,"start":153},{"end":284,"start":262}],"match_end":284,"match_start":67,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":84,"start":72},{"end":226,"start":211}],"match_end":226,"match_start":72,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":196,"start":187},{"end":274,"start":262}],"match_end":274,"match_start":187,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":185,"start":175}],"match_end":185,"match_start":175,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":596863,"start_pos":595909,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":83,"start":70}},{"range":{"end":126,"start":109}},{"range":{"end":144,"start":132}},{"range":{"end":161,"start":155}},{"range":{"end":241,"start":209}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03186","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC4F11.03c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03186.1"],"transcripts_by_uniquename":{"SJAG_03186.1":null},"uniprot_identifier":"B6K3J9","uniquename":"SJAG_03186"}


id: SJAG_03188
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75415],"is_not":false,"summary":null,"term":"GO:0009298"},{"annotations":[75414],"is_not":false,"summary":null,"term":"GO:0006486"}],"cellular_component":[{"annotations":[116108],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[63645],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[75416],"is_not":false,"summary":null,"term":"GO:0004475"}],"mondo":[{"annotations":[85910],"is_not":false,"summary":null,"term":"MONDO:0014142"},{"annotations":[85903],"is_not":false,"summary":null,"term":"MONDO:0014140"},{"annotations":[85908],"is_not":false,"summary":null,"term":"MONDO:0014141"}]},"dbxrefs":["InterPro:IPR001451","InterPro:IPR005835","GOA:B6K3K0","UniProtKB/TrEMBL:B6K3K0","InterPro:IPR029044","EnsemblGenomes-Gn:SJAG_03188","EnsemblGenomes-Tr:EEB08057","InterPro:IPR018357"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpc34","uniquename":"SJAG_03181"},{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"}],"genes_by_uniquename":{"HGNC:22932":null,"SJAG_03188":null,"SPCC1906.01":null,"YDL055C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleotidyl transferase","id":"PF00483","interpro_description":"Nucleotidyl transferase domain","interpro_id":"IPR005835","interpro_name":"NTP_transferase_dom","locations":[{"end":233,"start":2}],"match_end":233,"match_start":2,"name":"NTP_transferase"},{"dbname":"PFAM","description":"Bacterial transferase hexapeptide (six repeats)","id":"PF00132","interpro_description":"Hexapeptide repeat","interpro_id":"IPR001451","interpro_name":"Hexapep","locations":[{"end":288,"start":262}],"match_end":288,"match_start":262,"name":"Hexapep"},{"dbname":"CDD","description":"LbH_M1P_guanylylT_C","id":"cd05824","locations":[{"end":336,"start":257}],"match_end":336,"match_start":257,"name":"LbH_M1P_guanylylT_C"},{"dbname":"CDD","description":"M1P_guanylylT_B_like_N","id":"cd06425","interpro_description":"Mannose-1-phosphate guanyltransferase, N-terminal domain","interpro_id":"IPR045233","interpro_name":"GMPPB_N","locations":[{"end":234,"start":1}],"match_end":234,"match_start":1,"name":"M1P_guanylylT_B_like_N"},{"dbname":"PROSITE_PATTERNS","description":"Hexapeptide-repeat containing-transferases signature.","id":"PS00101","interpro_description":"Hexapeptide transferase, conserved site","interpro_id":"IPR018357","interpro_name":"Hexapep_transf_CS","locations":[{"end":286,"start":258}],"match_end":286,"match_start":258,"name":"HEXAPEP_TRANSFERASES"},{"dbname":"FUNFAM","description":"Mannose-1-phosphate guanyltransferase","id":"G3DSA:2.160.10.10:FF:000017","locations":[{"end":361,"start":234}],"match_end":361,"match_start":234},{"dbname":"FUNFAM","description":"mannose-1-phosphate guanyltransferase beta","id":"G3DSA:3.90.550.10:FF:000013","locations":[{"end":232,"start":1}],"match_end":232,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":312,"start":1}],"match_end":312,"match_start":1,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:2.160.10.10","locations":[{"end":362,"start":233}],"match_end":362,"match_start":233,"name":"Hexapeptide repeat proteins"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":232,"start":1}],"match_end":232,"match_start":1,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR22572","interpro_description":"Mannose-1-phosphate guanyltransferase","interpro_id":"IPR050486","interpro_name":"Mannose-1P_guanyltransferase","locations":[{"end":361,"start":1}],"match_end":361,"match_start":1,"name":"SUGAR-1-PHOSPHATE GUANYL TRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":599669,"start_pos":598578,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":24,"start":11}},{"range":{"end":285,"start":269}}],"name":"mpg1","ortholog_annotations":[{"gene_uniquename":"SJAG_03188","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22932","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03188","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1906.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03188","ortholog_taxonid":4932,"ortholog_uniquename":"YDL055C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03188","ortholog_taxonid":4932,"ortholog_uniquename":"YDL055C","reference_uniquename":"PMID:26896847"}],"product":"mannose-1-phosphate guanyltransferase Mpg1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0004475"]}},"subset_termids":["MONDO:0002320","GO:0005829","GO:0006486","MONDO:0024322","MONDO:0005336","GO:0016779","MONDO:0006025","GO:0055086","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004475":null,"GO:0005525":null,"GO:0005829":null,"GO:0006486":null,"GO:0009298":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03188.1"],"transcripts_by_uniquename":{"SJAG_03188.1":null},"uniprot_identifier":"B6K3K0","uniquename":"SJAG_03188"}


id: SJAG_03189
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116115],"is_not":false,"summary":null,"term":"GO:0072344"}],"cellular_component":[{"annotations":[116113],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116114],"is_not":false,"summary":null,"term":"GO:0180022"}],"molecular_function":[{"annotations":[62730],"is_not":false,"summary":null,"term":"GO:0043130"}]},"dbxrefs":["InterPro:IPR003892","EnsemblGenomes-Gn:SJAG_03189","UniProtKB/TrEMBL:B6K3K1","EnsemblGenomes-Tr:EEB08058"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":597,"start":520}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup186","uniquename":"SJAG_03182"},{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"}],"genes_by_uniquename":{"HGNC:24103":null,"SJAG_03189":null,"SPCC1906.02c":null,"YGL110C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CUE domain","id":"PF02845","interpro_description":"Ubiquitin system component CUE","interpro_id":"IPR003892","interpro_name":"CUE","locations":[{"end":320,"start":282}],"match_end":320,"match_start":282,"name":"CUE"},{"dbname":"PROSITE_PROFILES","description":"CUE domain profile.","id":"PS51140","interpro_description":"Ubiquitin system component CUE","interpro_id":"IPR003892","interpro_name":"CUE","locations":[{"end":322,"start":279}],"match_end":322,"match_start":279,"name":"CUE"},{"dbname":"PANTHER","id":"PTHR12493","locations":[{"end":579,"start":200}],"match_end":579,"match_start":200,"name":"CUE DOMAIN CONTAINING 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":597,"start":520}],"match_end":597,"match_start":520,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":597,"start":588}],"match_end":597,"match_start":588,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":572,"start":552}],"match_end":572,"match_start":552,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":602700,"start_pos":600907,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":334,"start":318}},{"range":{"end":411,"start":402}},{"range":{"end":594,"start":572}}],"name":"rqt3","ortholog_annotations":[{"gene_uniquename":"SJAG_03189","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24103","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03189","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1906.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03189","ortholog_taxonid":4932,"ortholog_uniquename":"YGL110C","reference_uniquename":"PMID:29761456"}],"product":"RQT complex CUE domain protein, human ASCC2 ortholog Rqt3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043130"]}},"subset_termids":["GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0043130":null,"GO:0072344":null,"GO:0180022":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03189.1"],"transcripts_by_uniquename":{"SJAG_03189.1":null},"uniprot_identifier":"B6K3K1","uniquename":"SJAG_03189"}


id: SJAG_03191
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115437],"is_not":false,"summary":null,"term":"GO:1990116"}],"cellular_component":[{"annotations":[115436],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[65641],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[65642],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08059","GOA:B6K3K2","InterPro:IPR000571","InterPro:IPR036855","InterPro:IPR041367","UniProtKB/TrEMBL:B6K3K2","EnsemblGenomes-Gn:SJAG_03191"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":47,"start":24}},{"range":{"end":138,"start":111}},{"range":{"end":518,"start":485}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ams2","uniquename":"SJAG_03183"},{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"}],"genes_by_uniquename":{"HGNC:7112":null,"SJAG_03191":null,"SPCC1739.01":null,"YPL054W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CCCH-type zinc finger","id":"PF18044","interpro_description":"E3 ligase, CCCH-type zinc finger","interpro_id":"IPR041367","interpro_name":"Znf-CCCH_4","locations":[{"end":75,"start":56},{"end":102,"start":83}],"match_end":102,"match_start":56,"name":"zf-CCCH_4"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C3H1-type profile.","id":"PS50103","interpro_description":"Zinc finger, CCCH-type","interpro_id":"IPR000571","interpro_name":"Znf_CCCH","locations":[{"end":105,"start":51}],"match_end":105,"match_start":51,"name":"ZF_C3H1"},{"dbname":"SMART","id":"SM00356","interpro_description":"Zinc finger, CCCH-type","interpro_id":"IPR000571","interpro_name":"Znf_CCCH","locations":[{"end":77,"start":51},{"end":104,"start":79}],"match_end":104,"match_start":51,"name":"c3hfinal6"},{"dbname":"SUPERFAMILY","id":"SSF90229","interpro_description":"Zinc finger, CCCH-type superfamily","interpro_id":"IPR036855","interpro_name":"Znf_CCCH_sf","locations":[{"end":76,"start":53},{"end":103,"start":79}],"match_end":103,"match_start":53,"name":"CCCH zinc finger"},{"dbname":"GENE3D","id":"G3DSA:4.10.1000.10","locations":[{"end":119,"start":47}],"match_end":119,"match_start":47},{"dbname":"PANTHER","id":"PTHR11224","interpro_description":"MKRN-like","interpro_id":"IPR045072","interpro_name":"MKRN-like","locations":[{"end":207,"start":55}],"match_end":207,"match_start":55,"name":"MAKORIN-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":47,"start":24},{"end":138,"start":111},{"end":518,"start":485}],"match_end":518,"match_start":24,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":518,"start":508}],"match_end":518,"match_start":508,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":128,"start":111},{"end":501,"start":485}],"match_end":501,"match_start":111,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":39,"start":24}],"match_end":39,"match_start":24,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":605982,"start_pos":604426,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":211,"start":202}},{"range":{"end":259,"start":239}},{"range":{"end":426,"start":410}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03191","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7112","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03191","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1739.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03191","ortholog_taxonid":4932,"ortholog_uniquename":"YPL054W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03191","ortholog_taxonid":4932,"ortholog_uniquename":"YPL054W","reference_uniquename":"PMID:26896847"}],"product":"E3 ubiquitin ligase, makorin family","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0019787","GO:0030163","GO:0016746","GO:0140096","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0008270":null,"GO:0061630":null,"GO:1990116":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03191.1"],"transcripts_by_uniquename":{"SJAG_03191.1":null},"uniprot_identifier":"B6K3K2","uniquename":"SJAG_03191"}


id: SJAG_03192
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115442],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[75636],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[75634],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6K3K3","EnsemblGenomes-Gn:SJAG_03192","InterPro:IPR001063","InterPro:IPR036394","UniProtKB/TrEMBL:B6K3K3","EnsemblGenomes-Tr:EEB08060","InterPro:IPR005727"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":82,"start":60}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptc1","uniquename":"SJAG_03185"},{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"}],"genes_by_uniquename":{"HGNC:14480":null,"SJAG_03192":null,"SPCC1739.02c":null,"YNL177C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L22p/L17e","id":"PF00237","interpro_description":"Large ribosomal subunit protein uL22","interpro_id":"IPR001063","interpro_name":"Ribosomal_uL22","locations":[{"end":200,"start":98}],"match_end":200,"match_start":98,"name":"Ribosomal_L22"},{"dbname":"CDD","description":"Ribosomal_L22","id":"cd00336","interpro_description":"Large ribosomal subunit protein uL22","interpro_id":"IPR001063","interpro_name":"Ribosomal_uL22","locations":[{"end":199,"start":97}],"match_end":199,"match_start":97,"name":"Ribosomal_L22"},{"dbname":"SUPERFAMILY","id":"SSF54843","interpro_description":"Ribosomal protein uL22 superfamily","interpro_id":"IPR036394","interpro_name":"Ribosomal_uL22_sf","locations":[{"end":202,"start":88}],"match_end":202,"match_start":88,"name":"Ribosomal protein L22"},{"dbname":"GENE3D","id":"G3DSA:3.90.470.10","interpro_description":"Ribosomal protein uL22 superfamily","interpro_id":"IPR036394","interpro_name":"Ribosomal_uL22_sf","locations":[{"end":221,"start":95}],"match_end":221,"match_start":95,"name":"Ribosomal protein L22/L17"},{"dbname":"PANTHER","id":"PTHR13501","interpro_description":"Large ribosomal subunit protein uL22, bacterial/organelle-type","interpro_id":"IPR047867","interpro_name":"Ribosomal_uL22_bac/org-type","locations":[{"end":232,"start":58}],"match_end":232,"match_start":58,"name":"CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":82,"start":60}],"match_end":82,"match_start":60,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":607246,"start_pos":606527,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":86,"start":71}}],"name":"mrpl22","ortholog_annotations":[{"gene_uniquename":"SJAG_03192","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14480","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03192","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1739.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03192","ortholog_taxonid":4932,"ortholog_uniquename":"YNL177C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L22","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0140053","GO:0005198","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03192.1"],"transcripts_by_uniquename":{"SJAG_03192.1":null},"uniprot_identifier":"B6K3K3","uniquename":"SJAG_03192"}


id: SJAG_03193
data:
  {"coiled_coil_coords":[{"range":{"end":677,"start":657}},{"range":{"end":761,"start":741}}],"cv_annotations":{"biological_process":[{"annotations":[115448],"is_not":false,"summary":null,"term":"GO:0140727"}],"cellular_component":[{"annotations":[115444],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[69874],"is_not":false,"summary":null,"term":"GO:0031380"}],"molecular_function":[{"annotations":[57248],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[115450],"is_not":false,"summary":null,"term":"GO:0106222"},{"annotations":[115451],"is_not":false,"summary":null,"term":"GO:0003724"}],"mondo":[{"annotations":[86016],"is_not":false,"summary":null,"term":"MONDO:0030491"}]},"dbxrefs":["InterPro:IPR041677","EnsemblGenomes-Tr:EEB08061","UniProtKB/TrEMBL:B6K3K4","InterPro:IPR014013","EnsemblGenomes-Gn:SJAG_03193","GOA:B6K3K4","InterPro:IPR027417","InterPro:IPR041679"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":27,"start":1}},{"range":{"end":98,"start":51}},{"range":{"end":195,"start":141}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03186"},{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"}],"genes_by_uniquename":{"HGNC:29271":null,"SJAG_03193":null,"SPCC1739.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"AAA domain","id":"PF13087","interpro_description":"DNA2/NAM7 helicase-like, C-terminal","interpro_id":"IPR041679","interpro_name":"DNA2/NAM7-like_C","locations":[{"end":1038,"start":852}],"match_end":1038,"match_start":852,"name":"AAA_12"},{"dbname":"PFAM","description":"AAA domain","id":"PF13086","interpro_description":"DNA2/NAM7 helicase, helicase domain","interpro_id":"IPR041677","interpro_name":"DNA2/NAM7_AAA_11","locations":[{"end":839,"start":466}],"match_end":839,"match_start":466,"name":"AAA_11"},{"dbname":"CDD","description":"SF1_C_Upf1","id":"cd18808","interpro_description":"Upf1-like, C-terminal helicase domain","interpro_id":"IPR047187","interpro_name":"SF1_C_Upf1","locations":[{"end":1052,"start":875}],"match_end":1052,"match_start":875,"name":"SF1_C_Upf1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile.","id":"PS51193","interpro_description":"Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type","interpro_id":"IPR014013","interpro_name":"Helic_SF1/SF2_ATP-bd_DinG/Rad3","locations":[{"end":839,"start":449}],"match_end":839,"match_start":449,"name":"HELICASE_ATP_BIND_2"},{"dbname":"FUNFAM","description":"P-loop containing nucleoside triphosphate hydrolase","id":"G3DSA:3.40.50.300:FF:000326","locations":[{"end":1065,"start":873}],"match_end":1065,"match_start":873},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":536,"start":463},{"end":658,"start":582},{"end":1049,"start":751}],"match_end":1049,"match_start":463,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":583,"start":383},{"end":872,"start":738},{"end":1063,"start":874}],"match_end":1063,"match_start":383},{"dbname":"PANTHER","id":"PTHR10887","interpro_description":"DNA2/NAM7-like helicase","interpro_id":"IPR045055","interpro_name":"DNA2/NAM7-like","locations":[{"end":1055,"start":113}],"match_end":1055,"match_start":113,"name":"DNA2/NAM7 HELICASE FAMILY"},{"dbname":"COILS","id":"Coil","locations":[{"end":677,"start":657},{"end":761,"start":741}],"match_end":761,"match_start":657,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":27,"start":1},{"end":98,"start":51},{"end":195,"start":141}],"match_end":195,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":190,"start":177}],"match_end":190,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":162,"start":144}],"match_end":162,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":98,"start":89}],"match_end":98,"match_start":89,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":611658,"start_pos":608219,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":82,"start":63}},{"range":{"end":190,"start":176}},{"range":{"end":677,"start":659}},{"range":{"end":755,"start":743}}],"name":"hrr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03193","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29271","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03193","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1739.03","reference_uniquename":"PMID:21511999"}],"product":"RNAi-mediated heterochromatin assembly helicase Hrr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0106222","GO:0005524"],"not-binding":["GO:0003724"]}},"subset_termids":["GO:0005829","GO:0006325","MONDO:0005046","GO:0005634","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003724":null,"GO:0005524":null,"GO:0005829":null,"GO:0031380":null,"GO:0106222":null,"GO:0140727":null,"MONDO:0030491":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03193.1"],"transcripts_by_uniquename":{"SJAG_03193.1":null},"uniprot_identifier":"B6K3K4","uniquename":"SJAG_03193"}


id: SJAG_03196
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[71029],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[71030],"is_not":false,"summary":null,"term":"GO:0004022"},{"annotations":[58572],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR036291","EnsemblGenomes-Gn:SJAG_03196","InterPro:IPR013154","EnsemblGenomes-Tr:EEB08063","InterPro:IPR013149","InterPro:IPR002328","InterPro:IPR011032","GOA:B6K3K6","InterPro:IPR020843","UniProtKB/TrEMBL:B6K3K6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"}],"genes_by_uniquename":{"SJAG_03196":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc-binding dehydrogenase","id":"PF00107","interpro_description":"Alcohol dehydrogenase-like, C-terminal","interpro_id":"IPR013149","interpro_name":"ADH-like_C","locations":[{"end":406,"start":279}],"match_end":406,"match_start":279,"name":"ADH_zinc_N"},{"dbname":"PFAM","description":"Alcohol dehydrogenase GroES-like domain","id":"PF08240","interpro_description":"Alcohol dehydrogenase-like, N-terminal","interpro_id":"IPR013154","interpro_name":"ADH-like_N","locations":[{"end":239,"start":127}],"match_end":239,"match_start":127,"name":"ADH_N"},{"dbname":"CDD","description":"CAD3","id":"cd08297","locations":[{"end":443,"start":105}],"match_end":443,"match_start":105,"name":"CAD3"},{"dbname":"PROSITE_PATTERNS","description":"Zinc-containing alcohol dehydrogenases signature.","id":"PS00059","interpro_description":"Alcohol dehydrogenase, zinc-type, conserved site","interpro_id":"IPR002328","interpro_name":"ADH_Zn_CS","locations":[{"end":177,"start":163}],"match_end":177,"match_start":163,"name":"ADH_ZINC"},{"dbname":"SMART","id":"SM00829","interpro_description":"Polyketide synthase, enoylreductase domain","interpro_id":"IPR020843","interpro_name":"PKS_ER","locations":[{"end":441,"start":111}],"match_end":441,"match_start":111,"name":"PKS_ER_names_mod"},{"dbname":"FUNFAM","description":"Alcohol dehydrogenase AdhP","id":"G3DSA:3.40.50.720:FF:000039","locations":[{"end":392,"start":251}],"match_end":392,"match_start":251},{"dbname":"FUNFAM","description":"Alcohol dehydrogenase AdhP","id":"G3DSA:3.90.180.10:FF:000002","locations":[{"end":264,"start":116}],"match_end":264,"match_start":116},{"dbname":"SUPERFAMILY","id":"SSF50129","interpro_description":"GroES-like superfamily","interpro_id":"IPR011032","interpro_name":"GroES-like_sf","locations":[{"end":265,"start":109}],"match_end":265,"match_start":109,"name":"GroES-like"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":411,"start":240}],"match_end":411,"match_start":240,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":392,"start":251}],"match_end":392,"match_start":251},{"dbname":"GENE3D","id":"G3DSA:3.90.180.10","locations":[{"end":250,"start":118},{"end":438,"start":393}],"match_end":438,"match_start":118},{"dbname":"PANTHER","id":"PTHR42940","locations":[{"end":444,"start":97}],"match_end":444,"match_start":97,"name":"ALCOHOL DEHYDROGENASE 1-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":615370,"start_pos":614033,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":39,"start":7}},{"range":{"end":68,"start":45}},{"range":{"end":96,"start":76}},{"range":{"end":130,"start":121}},{"range":{"end":183,"start":169}},{"range":{"end":283,"start":274}},{"range":{"end":331,"start":320}}],"product":"alcohol dehydrogenase (unknown specificity)","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0004022"]}},"subset_termids":["GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004022":null,"GO:0005737":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03196.1"],"transcripts_by_uniquename":{"SJAG_03196.1":null},"uniprot_identifier":"B6K3K6","uniquename":"SJAG_03196"}


id: SJAG_03197
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114503],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[114499],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[114501],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[97160],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[114505],"is_not":false,"summary":null,"term":"GO:0070180"},{"annotations":[114507],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR000218","InterPro:IPR036853","InterPro:IPR019972","EnsemblGenomes-Tr:EEB08064","GOA:B6JXG0","UniProtKB/TrEMBL:B6JXG0","EnsemblGenomes-Gn:SJAG_03197"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"}],"genes_by_uniquename":{"HGNC:10316":null,"SJAG_03197":null,"SPAC3G9.03":null,"SPCC1322.11":null,"YBL087C":null,"YER117W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L14p/L23e","id":"PF00238","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":139,"start":20}],"match_end":139,"match_start":20,"name":"Ribosomal_L14"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L14 signature.","id":"PS00049","interpro_description":"Large ribosomal subunit protein uL14, conserved site","interpro_id":"IPR019972","interpro_name":"Ribosomal_uL14_CS","locations":[{"end":104,"start":78}],"match_end":104,"match_start":78,"name":"RIBOSOMAL_L14"},{"dbname":"SMART","id":"SM01374","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":139,"start":18}],"match_end":139,"match_start":18,"name":"Ribosomal_L14_2"},{"dbname":"FUNFAM","description":"60S ribosomal protein L23","id":"G3DSA:2.40.150.20:FF:000003","locations":[{"end":139,"start":1}],"match_end":139,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50193","interpro_description":"Large ribosomal subunit protein uL14 superfamily","interpro_id":"IPR036853","interpro_name":"Ribosomal_uL14_sf","locations":[{"end":139,"start":10}],"match_end":139,"match_start":10,"name":"Ribosomal protein L14"},{"dbname":"GENE3D","id":"G3DSA:2.40.150.20","interpro_description":"Large ribosomal subunit protein uL14 superfamily","interpro_id":"IPR036853","interpro_name":"Ribosomal_uL14_sf","locations":[{"end":139,"start":2}],"match_end":139,"match_start":2,"name":"Ribosomal protein L14"},{"dbname":"PANTHER","id":"PTHR11761","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":139,"start":4}],"match_end":139,"match_start":4,"name":"50S/60S RIBOSOMAL PROTEIN L14/L23"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL14 [rplN].","id":"MF_01367","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":139,"start":18}],"match_end":139,"match_start":18,"name":"Ribosomal_L14"}],"location":{"chromosome_name":"supercont5.2","end_pos":616270,"start_pos":615770,"strand":"reverse"},"name":"rpl23a","ortholog_annotations":[{"gene_uniquename":"SJAG_03197","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10316","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10316","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3G9.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1322.11","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4932,"ortholog_uniquename":"YBL087C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4932,"ortholog_uniquename":"YBL087C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4932,"ortholog_uniquename":"YER117W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03197","ortholog_taxonid":4932,"ortholog_uniquename":"YER117W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L23","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0070180"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0030684","GO:0022626","GO:0005198","GO:0002181","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0022625":null,"GO:0030684":null,"GO:0070180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03197.1"],"transcripts_by_uniquename":{"SJAG_03197.1":null},"uniprot_identifier":"B6JXG0","uniquename":"SJAG_03197"}


id: SJAG_03198
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"coiled_coil_coords":[{"range":{"end":51,"start":31}}],"cv_annotations":{"biological_process":[{"annotations":[97152],"is_not":false,"summary":null,"term":"GO:0009107"}],"cellular_component":[{"annotations":[97151],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[97153],"is_not":false,"summary":null,"term":"GO:0004316"},{"annotations":[70674],"is_not":false,"summary":null,"term":"GO:0048038"}],"multi_locus_phenotype":[{"annotations":[119319,119321,119323],"is_not":false,"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[119306,119308,119322],"is_not":false,"summary":null,"term":"FYPO:0000080"}]},"dbxrefs":["InterPro:IPR002347","InterPro:IPR020904","InterPro:IPR036291","UniProtKB/TrEMBL:B6K3K8","GOA:B6K3K8","EnsemblGenomes-Gn:SJAG_03198","EnsemblGenomes-Tr:EEB08065"],"deletion_viability":"viable","feature_publications":[{"reference_uniquename":"PMID:23786411","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"}],"genes_by_uniquename":{"HGNC:25891":null,"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SPAC3G9.02":null,"YKL055C":null},"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"short chain dehydrogenase","id":"PF00106","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":199,"start":2}],"match_end":199,"match_start":2,"name":"adh_short"},{"dbname":"CDD","description":"SDR_c","id":"cd05233","locations":[{"end":234,"start":4}],"match_end":234,"match_start":4,"name":"SDR_c"},{"dbname":"PROSITE_PATTERNS","description":"Short-chain dehydrogenases/reductases family signature.","id":"PS00061","interpro_description":"Short-chain dehydrogenase/reductase, conserved site","interpro_id":"IPR020904","interpro_name":"Sc_DH/Rdtase_CS","locations":[{"end":172,"start":144}],"match_end":172,"match_start":144,"name":"ADH_SHORT"},{"dbname":"PRINTS","description":"Short-chain dehydrogenase/reductase (SDR) superfamily signature","id":"PR00080","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":87,"start":76},{"end":176,"start":157}],"match_end":176,"match_start":76,"name":"SDRFAMILY"},{"dbname":"PRINTS","description":"Glucose/ribitol dehydrogenase family signature","id":"PR00081","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":20,"start":3},{"end":87,"start":76},{"end":176,"start":157},{"end":195,"start":178},{"end":224,"start":204}],"match_end":224,"match_start":3,"name":"GDHRDH"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":225,"start":2}],"match_end":225,"match_start":2,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":235,"start":1}],"match_end":235,"match_start":1},{"dbname":"PANTHER","id":"PTHR42760","locations":[{"end":232,"start":2}],"match_end":232,"match_start":2,"name":"SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER"},{"dbname":"COILS","id":"Coil","locations":[{"end":51,"start":31}],"match_end":51,"match_start":31,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":617149,"start_pos":616442,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":146,"start":137}}],"name":"oar2","ortholog_annotations":[{"gene_uniquename":"SJAG_03198","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25891","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03198","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3G9.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03198","ortholog_taxonid":4932,"ortholog_uniquename":"YKL055C","reference_uniquename":"PMID:29761456"}],"product":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23786411":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0048038"],"not-binding":["GO:0004316"]},"multi_locus_phenotype":{"population_phenotype":["FYPO:0000674"]},"single_locus_phenotype":{"population_phenotype":["FYPO:0000080"]}},"subset_termids":["GO:0016491","FYPO:0002058","GO:0006790","GO:0005739","GO:0006629","FYPO:0000139"],"target_of_annotations":[{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_03575","genotype_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:23786411","show_in_summary":true},{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_03351","genotype_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:23786411","show_in_summary":true},{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_01956","genotype_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:23786411","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO:0000674":null,"FYPO_EXT:0000001":null,"GO:0004316":null,"GO:0005739":null,"GO:0009107":null,"GO:0048038":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03198.1"],"transcripts_by_uniquename":{"SJAG_03198.1":null},"uniprot_identifier":"B6K3K8","uniquename":"SJAG_03198"}


id: SJAG_03199
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94409],"is_not":false,"summary":null,"term":"GO:1903607"}],"cellular_component":[{"annotations":[60341],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[94408],"is_not":false,"summary":null,"term":"GO:0005758"}],"molecular_function":[{"annotations":[72629],"is_not":false,"summary":null,"term":"GO:0004408"}],"mondo":[{"annotations":[85922],"is_not":false,"summary":null,"term":"MONDO:0024552"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3L0","EnsemblGenomes-Tr:EEB08067","InterPro:IPR000511","EnsemblGenomes-Gn:SJAG_03199","GOA:B6K3L0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":65,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"}],"genes_by_uniquename":{"HGNC:4837":null,"SJAG_03199":null,"SPAC24C9.02c":null,"YKL087C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome c/c1 heme lyase","id":"PF01265","interpro_description":"Holocytochrome c/c1 synthase","interpro_id":"IPR000511","interpro_name":"Holocyt_c/c1_synthase","locations":[{"end":206,"start":34}],"match_end":206,"match_start":34,"name":"Cyto_heme_lyase"},{"dbname":"PROSITE_PATTERNS","description":"Cytochrome c and c1 heme lyases signature 2.","id":"PS00822","interpro_description":"Holocytochrome c/c1 synthase","interpro_id":"IPR000511","interpro_name":"Holocyt_c/c1_synthase","locations":[{"end":157,"start":151}],"match_end":157,"match_start":151,"name":"CYTO_HEME_LYASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Cytochrome c and c1 heme lyases signature 1.","id":"PS00821","interpro_description":"Holocytochrome c/c1 synthase","interpro_id":"IPR000511","interpro_name":"Holocyt_c/c1_synthase","locations":[{"end":113,"start":98}],"match_end":113,"match_start":98,"name":"CYTO_HEME_LYASE_1"},{"dbname":"PANTHER","id":"PTHR12743","interpro_description":"Holocytochrome c/c1 synthase","interpro_id":"IPR000511","interpro_name":"Holocyt_c/c1_synthase","locations":[{"end":211,"start":4}],"match_end":211,"match_start":4,"name":"CYTOCHROME C1 HEME LYASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":65,"start":1}],"match_end":65,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":34,"start":23}],"match_end":34,"match_start":23,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":21,"start":7},{"end":64,"start":55}],"match_end":64,"match_start":7,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":619406,"start_pos":618633,"strand":"forward"},"name":"cyt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03199","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4837","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03199","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03199","ortholog_taxonid":4932,"ortholog_uniquename":"YKL087C","reference_uniquename":"PMID:29761456"}],"product":"cytochrome c1 heme lyase Cyt2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004408"]}},"subset_termids":["GO:0140096","GO:0016829","GO:0005739","MONDO:0005093","MONDO:0005328"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004408":null,"GO:0005743":null,"GO:0005758":null,"GO:1903607":null,"MONDO:0024552":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03199.1"],"transcripts_by_uniquename":{"SJAG_03199.1":null},"uniprot_identifier":"B6K3L0","uniquename":"SJAG_03199"}


id: SJAG_03200
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90088],"is_not":false,"summary":null,"term":"GO:1903087"},{"annotations":[90089],"is_not":false,"summary":null,"term":"GO:0140480"},{"annotations":[80349],"is_not":false,"summary":null,"term":"GO:0006999"}],"cellular_component":[{"annotations":[90083],"is_not":false,"summary":null,"term":"GO:0140599"},{"annotations":[90084],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[119466],"is_not":false,"summary":null,"term":"GO:0070762"},{"annotations":[119467],"is_not":false,"summary":null,"term":"GO:0005816"}],"molecular_function":[{"annotations":[80348],"is_not":false,"summary":null,"term":"GO:0106166"}]},"dbxrefs":["InterPro:IPR019049","UniProtKB/TrEMBL:B6K3L1","GOA:B6K3L1","EnsemblGenomes-Gn:SJAG_03200","EnsemblGenomes-Tr:EEB08068"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:28954740","source":"canto"},{"reference_uniquename":"PMID:21733045","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"}],"genes_by_uniquename":{"HGNC:25525":null,"SJAG_03200":null,"SPAC1786.03":null,"YML031W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleoporin protein Ndc1-Nup","id":"PF09531","interpro_description":"Nucleoporin protein Ndc1-Nup","interpro_id":"IPR019049","interpro_name":"Nucleoporin_prot_Ndc1/Nup","locations":[{"end":599,"start":25}],"match_end":599,"match_start":25,"name":"Ndc1_Nup"},{"dbname":"PANTHER","id":"PTHR13269","interpro_description":"Nucleoporin protein Ndc1-Nup","interpro_id":"IPR019049","interpro_name":"Nucleoporin_prot_Ndc1/Nup","locations":[{"end":590,"start":11}],"match_end":590,"match_start":11,"name":"NUCLEOPORIN NDC1"}],"location":{"chromosome_name":"supercont5.2","end_pos":621453,"start_pos":619588,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":188,"start":178}}],"name":"cut11","ortholog_annotations":[{"gene_uniquename":"SJAG_03200","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25525","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03200","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1786.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03200","ortholog_taxonid":4932,"ortholog_uniquename":"YML031W","reference_uniquename":"PMID:29761456"}],"product":"spindle pole body docking protein Cut11","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21733045":null,"PMID:28954740":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0106166"]}},"subset_termids":["GO:0060090","GO:0005634","GO:0000226","GO:0005816","GO:0005643","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005816":null,"GO:0006999":null,"GO:0044732":null,"GO:0070762":null,"GO:0106166":null,"GO:0140480":null,"GO:0140599":null,"GO:1903087":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":55,"start":36}},{"assigned_by":"TMHMM","range":{"end":81,"start":59}},{"assigned_by":"TMHMM","range":{"end":129,"start":107}},{"assigned_by":"TMHMM","range":{"end":176,"start":154}},{"assigned_by":"TMHMM","range":{"end":222,"start":200}},{"assigned_by":"TMHMM","range":{"end":282,"start":260}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03200.1"],"transcripts_by_uniquename":{"SJAG_03200.1":null},"uniprot_identifier":"B6K3L1","uniquename":"SJAG_03200"}


id: SJAG_03201
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":411,"start":19}}],"cv_annotations":{"sequence":[{"annotations":[80681],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08069","UniProtKB/TrEMBL:B6K3L2","GOA:B6K3L2","EnsemblGenomes-Gn:SJAG_03201"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"}],"genes_by_uniquename":{"SJAG_03201":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":623370,"start_pos":622135,"strand":"forward"},"product":"Schizosaccharomyces japonicus specific 6/7 TM domain protein family","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":174,"start":152}},{"assigned_by":"TMHMM","range":{"end":208,"start":186}},{"assigned_by":"TMHMM","range":{"end":242,"start":223}},{"assigned_by":"TMHMM","range":{"end":277,"start":255}},{"assigned_by":"TMHMM","range":{"end":314,"start":292}},{"assigned_by":"TMHMM","range":{"end":357,"start":335}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03201.1"],"transcripts_by_uniquename":{"SJAG_03201.1":null},"uniprot_identifier":"B6K3L2","uniquename":"SJAG_03201"}


id: SJAG_03202
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":411,"start":19}}],"cv_annotations":{"sequence":[{"annotations":[80460],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08070","UniProtKB/TrEMBL:B6K3L3","GOA:B6K3L3","EnsemblGenomes-Gn:SJAG_03202"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"}],"genes_by_uniquename":{"SJAG_03202":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":625287,"start_pos":624052,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":276,"start":263}},{"range":{"end":302,"start":280}}],"product":"Schizosaccharomyces japonicus specific 6/7 TM domain protein family","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":176,"start":154}},{"assigned_by":"TMHMM","range":{"end":281,"start":259}},{"assigned_by":"TMHMM","range":{"end":313,"start":291}},{"assigned_by":"TMHMM","range":{"end":356,"start":334}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03202.1"],"transcripts_by_uniquename":{"SJAG_03202.1":null},"uniprot_identifier":"B6K3L3","uniquename":"SJAG_03202"}


id: SJAG_03203
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":393,"start":21}}],"cv_annotations":{"sequence":[{"annotations":[80552],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08071","UniProtKB/TrEMBL:B6K3L4","EnsemblGenomes-Gn:SJAG_03203","InterPro:IPR009637","GOA:B6K3L4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"}],"genes_by_uniquename":{"SJAG_03203":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GOST, seven transmembrane domain","id":"PF06814","interpro_description":"GOST, seven transmembrane domain","interpro_id":"IPR053937","interpro_name":"GOST_TM","locations":[{"end":343,"start":151}],"match_end":343,"match_start":151,"name":"GOST_TM"}],"location":{"chromosome_name":"supercont5.2","end_pos":626921,"start_pos":625740,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":205,"start":186}}],"product":"transmembrane protein GPR107/GPR108-like","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":20,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":173,"start":151}},{"assigned_by":"TMHMM","range":{"end":202,"start":180}},{"assigned_by":"TMHMM","range":{"end":250,"start":228}},{"assigned_by":"TMHMM","range":{"end":276,"start":257}},{"assigned_by":"TMHMM","range":{"end":305,"start":286}},{"assigned_by":"TMHMM","range":{"end":348,"start":326}},{"assigned_by":"TMHMM","range":{"end":375,"start":353}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03203.1"],"transcripts_by_uniquename":{"SJAG_03203.1":null},"uniprot_identifier":"B6K3L4","uniquename":"SJAG_03203"}


id: SJAG_03204
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":652,"start":26}}],"cv_annotations":{"biological_process":[{"annotations":[77242],"is_not":false,"summary":null,"term":"GO:0046475"}],"cellular_component":[{"annotations":[77244],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77243],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[90077],"is_not":false,"summary":null,"term":"GO:0009897"},{"annotations":[90078],"is_not":false,"summary":null,"term":"GO:0009277"}],"molecular_function":[{"annotations":[65823],"is_not":false,"summary":null,"term":"GO:0004622"},{"annotations":[77241],"is_not":false,"summary":null,"term":"GO:0004623"}],"mondo":[{"annotations":[86081],"is_not":false,"summary":null,"term":"MONDO:0018794"}],"sequence":[{"annotations":[80425],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR002642","EnsemblGenomes-Gn:SJAG_03204","GOA:B6K3L5","EnsemblGenomes-Tr:EEB08072","UniProtKB/TrEMBL:B6K3L5","InterPro:IPR016035"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"},{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"}],"genes_by_uniquename":{"HGNC:24791":null,"HGNC:27396":null,"HGNC:30038":null,"HGNC:9035":null,"HGNC:9036":null,"HGNC:9037":null,"SJAG_03204":null,"SPAC1786.02":null,"YMR006C":null,"YMR008C":null,"YOL011W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Lysophospholipase catalytic domain","id":"PF01735","interpro_description":"Lysophospholipase, catalytic domain","interpro_id":"IPR002642","interpro_name":"LysoPLipase_cat_dom","locations":[{"end":609,"start":121}],"match_end":609,"match_start":121,"name":"PLA2_B"},{"dbname":"PROSITE_PROFILES","description":"PLA2c domain profile.","id":"PS51210","interpro_description":"Lysophospholipase, catalytic domain","interpro_id":"IPR002642","interpro_name":"LysoPLipase_cat_dom","locations":[{"end":609,"start":61}],"match_end":609,"match_start":61,"name":"PLA2C"},{"dbname":"SMART","id":"SM00022","interpro_description":"Lysophospholipase, catalytic domain","interpro_id":"IPR002642","interpro_name":"LysoPLipase_cat_dom","locations":[{"end":603,"start":42}],"match_end":603,"match_start":42,"name":"pla2_6"},{"dbname":"FUNFAM","description":"Lysophospholipase","id":"G3DSA:3.40.1090.10:FF:000010","locations":[{"end":565,"start":69}],"match_end":565,"match_start":69},{"dbname":"SUPERFAMILY","id":"SSF52151","interpro_description":"Acyl transferase/acyl hydrolase/lysophospholipase","interpro_id":"IPR016035","interpro_name":"Acyl_Trfase/lysoPLipase","locations":[{"end":583,"start":74}],"match_end":583,"match_start":74,"name":"FabD/lysophospholipase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1090.10","locations":[{"end":557,"start":72}],"match_end":557,"match_start":72,"name":"Cytosolic phospholipase A2 catalytic domain"},{"dbname":"PANTHER","id":"PTHR10728","locations":[{"end":600,"start":44}],"match_end":600,"match_start":44,"name":"CYTOSOLIC PHOSPHOLIPASE A2"}],"location":{"chromosome_name":"supercont5.2","end_pos":629542,"start_pos":627584,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":646,"start":629}}],"name":"plb2","ortholog_annotations":[{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27396","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30038","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9035","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9036","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1786.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":4932,"ortholog_uniquename":"YMR006C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":4932,"ortholog_uniquename":"YMR008C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03204","ortholog_taxonid":4932,"ortholog_uniquename":"YOL011W","reference_uniquename":"PMID:29761456"}],"product":"phospholipase Plb2","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":25,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004622","GO:0004623"]}},"subset_termids":["MONDO:0004335","GO:0016788","GO:0005886","GO:0005618","MONDO:0005570","GO:0009986","GO:0005829","GO:0006629","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004622":null,"GO:0004623":null,"GO:0005783":null,"GO:0005829":null,"GO:0009277":null,"GO:0009897":null,"GO:0046475":null,"MONDO:0018794":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03204.1"],"transcripts_by_uniquename":{"SJAG_03204.1":null},"uniprot_identifier":"B6K3L5","uniquename":"SJAG_03204"}


id: SJAG_03206
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70191],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[90219],"is_not":false,"summary":null,"term":"GO:0006283"}],"cellular_component":[{"annotations":[70188],"is_not":false,"summary":null,"term":"GO:0000112"},{"annotations":[90215],"is_not":false,"summary":null,"term":"GO:0000439"},{"annotations":[70189],"is_not":false,"summary":null,"term":"GO:0005675"},{"annotations":[70190],"is_not":false,"summary":null,"term":"GO:0097550"}],"molecular_function":[{"annotations":[70187],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[57601],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[57602],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[57604],"is_not":false,"summary":null,"term":"GO:0016787"},{"annotations":[90224],"is_not":false,"summary":null,"term":"GO:0016251"}],"mondo":[{"annotations":[85257],"is_not":false,"summary":null,"term":"MONDO:0014615"},{"annotations":[85821],"is_not":false,"summary":null,"term":"MONDO:0012531"}]},"dbxrefs":["GOA:B6K3L6","InterPro:IPR001161","InterPro:IPR001650","InterPro:IPR014001","InterPro:IPR006935","InterPro:IPR027417","InterPro:IPR032830","InterPro:IPR032438","UniProtKB/TrEMBL:B6K3L6","EnsemblGenomes-Tr:EEB08073","EnsemblGenomes-Gn:SJAG_03206"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":35,"start":1}},{"range":{"end":248,"start":219}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03201"},{"uniquename":"SJAG_03202"},{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"}],"genes_by_uniquename":{"HGNC:3435":null,"SJAG_03206":null,"SPAC17A5.06":null,"YIL143C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Type III restriction enzyme, res subunit","id":"PF04851","interpro_description":"Helicase/UvrB, N-terminal","interpro_id":"IPR006935","interpro_name":"Helicase/UvrB_N","locations":[{"end":478,"start":321}],"match_end":478,"match_start":321,"name":"ResIII"},{"dbname":"PFAM","description":"ERCC3/RAD25/XPB C-terminal helicase","id":"PF16203","interpro_description":"ERCC3/RAD25/XPB helicase, C-terminal domain","interpro_id":"IPR032438","interpro_name":"ERCC3_RAD25_C","locations":[{"end":736,"start":503}],"match_end":736,"match_start":503,"name":"ERCC3_RAD25_C"},{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF13625","interpro_description":"Helicase XPB/Ssl2, N-terminal domain","interpro_id":"IPR032830","interpro_name":"XPB/Ssl2_N","locations":[{"end":220,"start":94}],"match_end":220,"match_start":94,"name":"Helicase_C_3"},{"dbname":"CDD","description":"SF2_C_XPB","id":"cd18789","locations":[{"end":669,"start":514}],"match_end":669,"match_start":514,"name":"SF2_C_XPB"},{"dbname":"CDD","description":"DEXHc_XPB","id":"cd18029","locations":[{"end":483,"start":314}],"match_end":483,"match_start":314,"name":"DEXHc_XPB"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":495,"start":333}],"match_end":495,"match_start":333,"name":"HELICASE_ATP_BIND_1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":703,"start":549}],"match_end":703,"match_start":549,"name":"HELICASE_CTER"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":654,"start":576}],"match_end":654,"match_start":576,"name":"helicmild6"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":509,"start":318}],"match_end":509,"match_start":318,"name":"ultradead3"},{"dbname":"PRINTS","description":"Xeroderma pigmentosum group B protein signature","id":"PR00851","locations":[{"end":113,"start":93},{"end":198,"start":179},{"end":329,"start":303},{"end":356,"start":334},{"end":461,"start":441},{"end":529,"start":507},{"end":559,"start":544},{"end":585,"start":563},{"end":654,"start":610},{"end":682,"start":659},{"end":772,"start":753}],"match_end":772,"match_start":93,"name":"XRODRMPGMNTB"},{"dbname":"FUNFAM","description":"Putative DNA repair helicase rad25","id":"G3DSA:3.40.50.300:FF:000117","locations":[{"end":737,"start":504}],"match_end":737,"match_start":504},{"dbname":"FUNFAM","description":"Probable DNA repair helicase RAD25","id":"G3DSA:3.40.50.300:FF:000077","locations":[{"end":503,"start":312}],"match_end":503,"match_start":312},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":505,"start":272},{"end":725,"start":538}],"match_end":725,"match_start":272,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":736,"start":313}],"match_end":736,"match_start":313},{"dbname":"PANTHER","id":"PTHR11274","interpro_description":"ATP-dependent DNA Helicase","interpro_id":"IPR050615","interpro_name":"ATP-dep_DNA_Helicase","locations":[{"end":776,"start":84}],"match_end":776,"match_start":84,"name":"RAD25/XP-B DNA REPAIR HELICASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":35,"start":1},{"end":248,"start":219}],"match_end":248,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":29,"start":14}],"match_end":29,"match_start":14,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":241,"start":224}],"match_end":241,"match_start":224,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"DNA repair helicase rad25","id":"TIGR00603","interpro_description":"Helicase XPB/Ssl2","interpro_id":"IPR001161","interpro_name":"XPB/Ssl2","locations":[{"end":793,"start":78}],"match_end":793,"match_start":78,"name":"rad25"}],"location":{"chromosome_name":"supercont5.2","end_pos":634616,"start_pos":632214,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":58,"start":37}},{"range":{"end":249,"start":234}},{"range":{"end":270,"start":264}},{"range":{"end":315,"start":304}},{"range":{"end":725,"start":716}},{"range":{"end":753,"start":743}}],"name":"ptr8","ortholog_annotations":[{"gene_uniquename":"SJAG_03206","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3435","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03206","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03206","ortholog_taxonid":4932,"ortholog_uniquename":"YIL143C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03206","ortholog_taxonid":4932,"ortholog_uniquename":"YIL143C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIH complex DNA helicase (human ERCC3) subunit Ptr8","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003677"],"not-binding":["GO:0016787","GO:0016251","GO:0043138"]}},"subset_termids":["GO:0005634","MONDO:0005066","GO:0006351","GO:0006281","GO:0005654","GO:0140223","MONDO:0021190","MONDO:0005093","GO:0140097"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000112":null,"GO:0000439":null,"GO:0003677":null,"GO:0005524":null,"GO:0005675":null,"GO:0006283":null,"GO:0006367":null,"GO:0016251":null,"GO:0016787":null,"GO:0043138":null,"GO:0097550":null,"MONDO:0012531":null,"MONDO:0014615":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03206.1"],"transcripts_by_uniquename":{"SJAG_03206.1":null},"uniprot_identifier":"B6K3L6","uniquename":"SJAG_03206"}


id: SJAG_03209
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72815],"is_not":false,"summary":null,"term":"GO:0045332"},{"annotations":[105537],"is_not":false,"summary":null,"term":"GO:0000749"},{"annotations":[105538],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[105533],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72816],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72818],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[60545],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[72814],"is_not":false,"summary":null,"term":"GO:0004674"}],"mondo":[{"annotations":[86226],"is_not":false,"summary":null,"term":"MONDO:0032648"}]},"dbxrefs":["InterPro:IPR008271","GOA:B6K3L9","EnsemblGenomes-Tr:EEB08076","EnsemblGenomes-Gn:SJAG_03209","InterPro:IPR000719","InterPro:IPR011009","UniProtKB/TrEMBL:B6K3L9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":39,"start":1}},{"range":{"end":124,"start":54}},{"range":{"end":554,"start":532}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03203"},{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"}],"genes_by_uniquename":{"HGNC:19034":null,"HGNC:19037":null,"SJAG_03209":null,"SPBC1861.09":null,"YCR091W":null,"YNR047W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":471,"start":181}],"match_end":471,"match_start":181,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_phototropin_like","id":"cd05574","locations":[{"end":495,"start":180}],"match_end":495,"match_start":180,"name":"STKc_phototropin_like"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":314,"start":302}],"match_end":314,"match_start":302,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":471,"start":181}],"match_end":471,"match_start":181,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":471,"start":181}],"match_end":471,"match_start":181,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Serine/threonine-protein kinase nrc-2","id":"G3DSA:1.10.510.10:FF:000121","locations":[{"end":489,"start":265}],"match_end":489,"match_start":265},{"dbname":"FUNFAM","description":"AGC/RSK protein kinase","id":"G3DSA:3.30.200.20:FF:001236","locations":[{"end":270,"start":180}],"match_end":270,"match_start":180},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":334,"start":164},{"end":492,"start":365}],"match_end":492,"match_start":164,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":329,"start":265},{"end":489,"start":358}],"match_end":489,"match_start":265,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":264,"start":180},{"end":493,"start":490}],"match_end":493,"match_start":180,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"PANTHER","id":"PTHR45637","locations":[{"end":495,"start":20}],"match_end":495,"match_start":20,"name":"FLIPPASE KINASE 1-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":39,"start":1},{"end":124,"start":54},{"end":554,"start":532}],"match_end":554,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":39,"start":30},{"end":66,"start":54}],"match_end":66,"match_start":30,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":29,"start":1}],"match_end":29,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":639236,"start_pos":637435,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":26,"start":3}},{"range":{"end":93,"start":79}}],"name":"ppk22","ortholog_annotations":[{"gene_uniquename":"SJAG_03209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19034","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":4932,"ortholog_uniquename":"YCR091W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":4932,"ortholog_uniquename":"YCR091W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":4932,"ortholog_uniquename":"YNR047W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03209","ortholog_taxonid":4932,"ortholog_uniquename":"YNR047W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein kinase Ppk22","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0004672","GO:0140096","GO:0016301","GO:0005634","GO:0005886","GO:0061024","GO:0005829","GO:0000747","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000749":null,"GO:0004674":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0005886":null,"GO:0023052":null,"GO:0045332":null,"MONDO:0032648":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03209.1"],"transcripts_by_uniquename":{"SJAG_03209.1":null},"uniprot_identifier":"B6K3L9","uniquename":"SJAG_03209"}


id: SJAG_03210
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77321],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[105524],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105526],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[77322],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[105529],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[77320],"is_not":false,"summary":null,"term":"GO:0030620"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03210","EnsemblGenomes-Tr:EEB08077","InterPro:IPR032675","InterPro:IPR001611","UniProtKB/TrEMBL:B6K3M0","GOA:B6K3M0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"plb2","uniquename":"SJAG_03204"},{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"},{"name":"naa35","uniquename":"SJAG_03215"}],"genes_by_uniquename":{"HGNC:11152":null,"SJAG_03210":null,"SPBC1861.08c":null,"YPL213W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Leucine-rich repeat","id":"PF14580","locations":[{"end":173,"start":27}],"match_end":173,"match_start":27,"name":"LRR_9"},{"dbname":"PROSITE_PROFILES","description":"Leucine-rich repeat profile.","id":"PS51450","interpro_description":"Leucine-rich repeat","interpro_id":"IPR001611","interpro_name":"Leu-rich_rpt","locations":[{"end":119,"start":98}],"match_end":119,"match_start":98,"name":"LRR"},{"dbname":"FUNFAM","description":"U2 small nuclear ribonucleoprotein A","id":"G3DSA:3.80.10.10:FF:000026","locations":[{"end":185,"start":19}],"match_end":185,"match_start":19},{"dbname":"SUPERFAMILY","id":"SSF52058","locations":[{"end":162,"start":35}],"match_end":162,"match_start":35,"name":"L domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.80.10.10","interpro_description":"Leucine-rich repeat domain superfamily","interpro_id":"IPR032675","interpro_name":"LRR_dom_sf","locations":[{"end":172,"start":19}],"match_end":172,"match_start":19,"name":"Ribonuclease Inhibitor"},{"dbname":"PANTHER","id":"PTHR10552","interpro_description":"U2 small nuclear ribonucleoprotein A'","interpro_id":"IPR044640","interpro_name":"RU2A","locations":[{"end":249,"start":30}],"match_end":249,"match_start":30,"name":"U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A"}],"location":{"chromosome_name":"supercont5.2","end_pos":641134,"start_pos":640317,"strand":"forward"},"name":"lea1","ortholog_annotations":[{"gene_uniquename":"SJAG_03210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11152","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03210","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03210","ortholog_taxonid":4932,"ortholog_uniquename":"YPL213W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03210","ortholog_taxonid":4932,"ortholog_uniquename":"YPL213W","reference_uniquename":"PMID:26896847"}],"product":"U2 snRNP-associated protein Lea1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030620"]}},"subset_termids":["GO:0005829","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005686":null,"GO:0005829":null,"GO:0030620":null,"GO:0045292":null,"GO:0071004":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03210.1"],"transcripts_by_uniquename":{"SJAG_03210.1":null},"uniprot_identifier":"B6K3M0","uniquename":"SJAG_03210"}


id: SJAG_03211
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105519],"is_not":false,"summary":null,"term":"GO:0006368"},{"annotations":[105520],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[76413],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[105516],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76414],"is_not":false,"summary":null,"term":"GO:0070449"}],"molecular_function":[{"annotations":[76412],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[105523],"is_not":false,"summary":null,"term":"GO:0003711"}]},"dbxrefs":["GOA:B6K3M1","EnsemblGenomes-Tr:EEB08078","EnsemblGenomes-Gn:SJAG_03211","InterPro:IPR001232","InterPro:IPR011333","UniProtKB/TrEMBL:B6K3M1","InterPro:IPR039948","InterPro:IPR016073"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06109"},{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"},{"name":"naa35","uniquename":"SJAG_03215"},{"name":"abp2","uniquename":"SJAG_03216"}],"genes_by_uniquename":{"HGNC:11617":null,"SJAG_03211":null,"SPBC1861.07":null,"YPL046C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Skp1 family, tetramerisation domain","id":"PF03931","interpro_description":"SKP1 component, POZ domain","interpro_id":"IPR016073","interpro_name":"Skp1_comp_POZ","locations":[{"end":66,"start":5}],"match_end":66,"match_start":5,"name":"Skp1_POZ"},{"dbname":"CDD","description":"BTB_POZ_EloC","id":"cd18321","locations":[{"end":97,"start":5}],"match_end":97,"match_start":5,"name":"BTB_POZ_EloC"},{"dbname":"SMART","id":"SM00512","interpro_description":"S-phase kinase-associated protein 1-like","interpro_id":"IPR001232","interpro_name":"SKP1-like","locations":[{"end":97,"start":3}],"match_end":97,"match_start":3,"name":"skp1_3"},{"dbname":"FUNFAM","description":"Elongin C transcription elongation factor","id":"G3DSA:3.30.710.10:FF:000035","locations":[{"end":97,"start":3}],"match_end":97,"match_start":3},{"dbname":"SUPERFAMILY","id":"SSF54695","interpro_description":"SKP1/BTB/POZ domain superfamily","interpro_id":"IPR011333","interpro_name":"SKP1/BTB/POZ_sf","locations":[{"end":97,"start":2}],"match_end":97,"match_start":2,"name":"POZ domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.710.10","interpro_description":"SKP1/BTB/POZ domain superfamily","interpro_id":"IPR011333","interpro_name":"SKP1/BTB/POZ_sf","locations":[{"end":97,"start":3}],"match_end":97,"match_start":3,"name":"Potassium Channel Kv1.1; Chain A"},{"dbname":"PANTHER","id":"PTHR20648","interpro_description":"Elongin-C","interpro_id":"IPR039948","interpro_name":"ELC1","locations":[{"end":97,"start":3}],"match_end":97,"match_start":3,"name":"ELONGIN-C"}],"location":{"chromosome_name":"supercont5.2","end_pos":641736,"start_pos":641286,"strand":"reverse"},"name":"elc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03211","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11617","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03211","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03211","ortholog_taxonid":4932,"ortholog_uniquename":"YPL046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03211","ortholog_taxonid":4932,"ortholog_uniquename":"YPL046C","reference_uniquename":"PMID:26896847"}],"product":"elongin C Elc1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003711","GO:0030674"]}},"subset_termids":["GO:0060090","GO:0005829","GO:0030163","GO:0005634","GO:0006351","GO:0003711","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003711":null,"GO:0005829":null,"GO:0006367":null,"GO:0006368":null,"GO:0006511":null,"GO:0030674":null,"GO:0070449":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03211.1"],"transcripts_by_uniquename":{"SJAG_03211.1":null},"uniprot_identifier":"B6K3M1","uniquename":"SJAG_03211"}


id: SJAG_03212
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[105515],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08079","EnsemblGenomes-Gn:SJAG_03212","InterPro:IPR013903","UniProtKB/TrEMBL:B6K3M2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":470,"start":451}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ptr8","uniquename":"SJAG_03206"},{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"},{"name":"naa35","uniquename":"SJAG_03215"},{"name":"abp2","uniquename":"SJAG_03216"},{"name":"cnp3","uniquename":"SJAG_03217"}],"genes_by_uniquename":{"SJAG_03212":null,"SPBC1861.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Uncharacterised protein family (UPF0300)","id":"PF08594","interpro_description":"Meiotic expression up-regulated protein","interpro_id":"IPR013903","interpro_name":"Meiotic_expression","locations":[{"end":406,"start":199}],"match_end":406,"match_start":199,"name":"UPF0300"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":470,"start":451}],"match_end":470,"match_start":451,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":643659,"start_pos":642247,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":104,"start":92}}],"name":"mug131","ortholog_annotations":[{"gene_uniquename":"SJAG_03212","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.06c","reference_uniquename":"PMID:21511999"}],"product":"UPF0300 family protein 4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03212.1"],"transcripts_by_uniquename":{"SJAG_03212.1":null},"uniprot_identifier":"B6K3M2","uniquename":"SJAG_03212"}


id: SJAG_03213
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68692],"is_not":false,"summary":null,"term":"GO:0001522"},{"annotations":[105511],"is_not":false,"summary":null,"term":"GO:0006213"}],"cellular_component":[{"annotations":[79607],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[105512],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[105513],"is_not":false,"summary":null,"term":"GO:0050225"},{"annotations":[79606],"is_not":false,"summary":null,"term":"GO:0004730"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08080","InterPro:IPR011611","InterPro:IPR029056","UniProtKB/TrEMBL:B6K3M3","InterPro:IPR022830","GOA:B6K3M3","InterPro:IPR007342","EnsemblGenomes-Gn:SJAG_03213"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ulp2","uniquename":"SJAG_16454"},{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"},{"name":"naa35","uniquename":"SJAG_03215"},{"name":"abp2","uniquename":"SJAG_03216"},{"name":"cnp3","uniquename":"SJAG_03217"},{"name":"mrpl44","uniquename":"SJAG_06110"}],"genes_by_uniquename":{"SJAG_03213":null,"SPBC1861.05":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"pfkB family carbohydrate kinase","id":"PF00294","interpro_description":"Carbohydrate kinase PfkB","interpro_id":"IPR011611","interpro_name":"PfkB_dom","locations":[{"end":562,"start":368},{"end":716,"start":608}],"match_end":716,"match_start":368,"name":"PfkB"},{"dbname":"PFAM","description":"Indigoidine synthase A like protein","id":"PF04227","interpro_description":"Pseudouridine-5'-phosphate glycosidase","interpro_id":"IPR007342","interpro_name":"PsuG","locations":[{"end":326,"start":35}],"match_end":326,"match_start":35,"name":"Indigoidine_A"},{"dbname":"CDD","description":"YeiC_kinase_like","id":"cd01941","locations":[{"end":710,"start":368}],"match_end":710,"match_start":368,"name":"YeiC_kinase_like"},{"dbname":"SUPERFAMILY","id":"SSF53613","interpro_description":"Ribokinase-like","interpro_id":"IPR029056","interpro_name":"Ribokinase-like","locations":[{"end":562,"start":369},{"end":715,"start":606}],"match_end":715,"match_start":369,"name":"Ribokinase-like"},{"dbname":"SUPERFAMILY","id":"SSF110581","interpro_description":"Indigoidine synthase A-like","interpro_id":"IPR022830","interpro_name":"Indigdn_synthA-like","locations":[{"end":328,"start":28}],"match_end":328,"match_start":28,"name":"Indigoidine synthase A-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1190.20","interpro_description":"Ribokinase-like","interpro_id":"IPR029056","interpro_name":"Ribokinase-like","locations":[{"end":722,"start":363}],"match_end":722,"match_start":363},{"dbname":"GENE3D","id":"G3DSA:3.40.1790.10","interpro_description":"Indigoidine synthase A-like","interpro_id":"IPR022830","interpro_name":"Indigdn_synthA-like","locations":[{"end":333,"start":26}],"match_end":333,"match_start":26,"name":"Indigoidine synthase domain"},{"dbname":"PANTHER","id":"PTHR42909","locations":[{"end":722,"start":15}],"match_end":722,"match_start":15,"name":"ZGC:136858"},{"dbname":"HAMAP","description":"Pseudouridine-5'-phosphate glycosidase [psuG].","id":"MF_01876","interpro_description":"Pseudouridine-5'-phosphate glycosidase","interpro_id":"IPR007342","interpro_name":"PsuG","locations":[{"end":330,"start":34}],"match_end":330,"match_start":34,"name":"PsiMP_glycosidase"}],"location":{"chromosome_name":"supercont5.2","end_pos":645992,"start_pos":643748,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":632,"start":612}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03213","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.05","reference_uniquename":"PMID:21511999"}],"product":"bifunctional pseudouridylate synthase/pseudouridine kinase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0050225","GO:0004730"]}},"subset_termids":["GO:0055086","GO:0016301","GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001522":null,"GO:0004730":null,"GO:0005524":null,"GO:0005737":null,"GO:0006213":null,"GO:0050225":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03213.1"],"transcripts_by_uniquename":{"SJAG_03213.1":null},"uniprot_identifier":"B6K3M3","uniquename":"SJAG_03213"}


id: SJAG_03214
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105505],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[105506],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[105507],"is_not":false,"summary":null,"term":"GO:0000244"}],"cellular_component":[{"annotations":[74571],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[74569],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105504],"is_not":false,"summary":null,"term":"GO:0005688"}],"molecular_function":[{"annotations":[74570],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[74567],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[74572],"is_not":false,"summary":null,"term":"GO:0008266"},{"annotations":[105508],"is_not":false,"summary":null,"term":"GO:0017069"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03214","UniProtKB/TrEMBL:B6K3M4","InterPro:IPR008669","InterPro:IPR012677","InterPro:IPR035979","GOA:B6K3M4","InterPro:IPR034397","InterPro:IPR000504","EnsemblGenomes-Tr:EEB08081","InterPro:IPR011990","InterPro:IPR034398","InterPro:IPR031766"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppk22","uniquename":"SJAG_03209"},{"name":"lea1","uniquename":"SJAG_03210"},{"name":"elc1","uniquename":"SJAG_03211"},{"name":"mug131","uniquename":"SJAG_03212"},{"uniquename":"SJAG_03213"},{"name":"prp24","uniquename":"SJAG_03214"},{"name":"naa35","uniquename":"SJAG_03215"},{"name":"abp2","uniquename":"SJAG_03216"},{"name":"cnp3","uniquename":"SJAG_03217"},{"name":"mrpl44","uniquename":"SJAG_06110"},{"name":"pof12","uniquename":"SJAG_03218"}],"genes_by_uniquename":{"HGNC:16860":null,"SJAG_03214":null,"SPBC1861.04c":null,"YMR268C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":650,"start":584},{"end":725,"start":660},{"end":818,"start":751}],"match_end":818,"match_start":584,"name":"RRM_1"},{"dbname":"PFAM","description":"Suppressor of forked protein (Suf)","id":"PF05843","interpro_description":"Suppressor of forked","interpro_id":"IPR008847","interpro_name":"Suf","locations":[{"end":215,"start":20}],"match_end":215,"match_start":20,"name":"Suf"},{"dbname":"PFAM","description":"Lsm interaction motif","id":"PF05391","interpro_description":"LSM-interacting domain","interpro_id":"IPR008669","interpro_name":"LSM_interact","locations":[{"end":997,"start":981}],"match_end":997,"match_start":981,"name":"Lsm_interact"},{"dbname":"PFAM","description":"Occluded RNA-recognition motif","id":"PF16842","interpro_description":"Occluded RNA-recognition motif","interpro_id":"IPR031766","interpro_name":"RRM_occluded","locations":[{"end":934,"start":859}],"match_end":934,"match_start":859,"name":"RRM_occluded"},{"dbname":"CDD","description":"RRM4_Prp24","id":"cd12299","interpro_description":"Occluded RNA-recognition motif","interpro_id":"IPR031766","interpro_name":"RRM_occluded","locations":[{"end":928,"start":859}],"match_end":928,"match_start":859,"name":"RRM4_Prp24"},{"dbname":"CDD","description":"RRM1_Prp24","id":"cd12296","interpro_description":"Prp24, RNA recognition motif1","interpro_id":"IPR034397","interpro_name":"Prp24_RRM1","locations":[{"end":652,"start":582}],"match_end":652,"match_start":582,"name":"RRM1_Prp24"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":735,"start":582},{"end":825,"start":749},{"end":931,"start":859}],"match_end":931,"match_start":582,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":653,"start":583},{"end":731,"start":659},{"end":821,"start":750},{"end":927,"start":860}],"match_end":927,"match_start":583,"name":"rrm1_1"},{"dbname":"FUNFAM","description":"U4/U6 snRNA-associated-splicing factor PRP24","id":"G3DSA:3.30.70.330:FF:000365","locations":[{"end":736,"start":656}],"match_end":736,"match_start":656},{"dbname":"FUNFAM","description":"Pre-mRNA splicing factor (Prp24), putative","id":"G3DSA:3.30.70.330:FF:000588","locations":[{"end":946,"start":850}],"match_end":946,"match_start":850},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":653,"start":574},{"end":742,"start":656},{"end":926,"start":749}],"match_end":926,"match_start":574,"name":"RNA-binding domain, RBD"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":355,"start":26}],"match_end":355,"match_start":26,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":654,"start":574},{"end":836,"start":656},{"end":946,"start":850}],"match_end":946,"match_start":574},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":228,"start":25},{"end":372,"start":256},{"end":540,"start":420}],"match_end":540,"match_start":25,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR10352","locations":[{"end":820,"start":736}],"match_end":820,"match_start":736,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G"}],"location":{"chromosome_name":"supercont5.2","end_pos":650017,"start_pos":646975,"strand":"forward"},"name":"prp24","ortholog_annotations":[{"gene_uniquename":"SJAG_03214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16860","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03214","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1861.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03214","ortholog_taxonid":4932,"ortholog_uniquename":"YMR268C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03214","ortholog_taxonid":4932,"ortholog_uniquename":"YMR268C","reference_uniquename":"PMID:26896847"}],"product":"RNA-binding protein Prp24","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003730","GO:0008266","GO:0008143","GO:0017069"]}},"subset_termids":["GO:0005829","GO:0016071","GO:0010494","GO:0005634","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000244":null,"GO:0000245":null,"GO:0003730":null,"GO:0005688":null,"GO:0005829":null,"GO:0008143":null,"GO:0008266":null,"GO:0010494":null,"GO:0017069":null,"GO:0045292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03214.1"],"transcripts_by_uniquename":{"SJAG_03214.1":null},"uniprot_identifier":"B6K3M4","uniquename":"SJAG_03214"}


