# terms

id: MONDO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly with and without other manifestations (obsolete MONDO:0034673)","termid":"MONDO:0034673","xrefs":{"Monarch":{"xref_id":"0034673"}}}


id: GO:0072429
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104159],"is_not":false,"summary":null,"term":"GO:0072429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-S DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0072429","terms_by_termid":{"GO:0072429":null}}


id: PBO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034632"}


id: PBO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-0 (non-functional)","termid":"PBO:0051308"}


id: PBO:0062837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 3","termid":"PBO:0062837"}


id: PBO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A8","termid":"PBO:0072747"}


id: GO:2001032
data:
  {"annotated_genes":["SJAG_03048","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NHEJ","type":"exact"}],"termid":"GO:2001032","terms_by_termid":{"GO:2001033":null,"GO:2001034":null}}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: MOD:01816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0542","PubMed:11714714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2'-hydroxy-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-hydroxy-L-tryptophan","type":"exact"},{"name":"2-hydroxy-tryptophan","type":"exact"}],"termid":"MOD:01816"}


id: PBO:0050885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase 2","termid":"PBO:0050885"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: MONDO:0010912
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86728],"is_not":false,"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"},{"relation_name":"is_a","term_name":"TUBB3-related tubulinopathy","termid":"MONDO:0100154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600638","DOID:0081017","GARD:15321","MEDGEN:412638","UMLS:C2748801","MESH:C567572"],"synonyms":[{"name":"CFEOM3A","type":"related"},{"name":"Feom3 locus","type":"related"},{"name":"TUBB3 congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in TUBB3","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","type":"exact"}],"termid":"MONDO:0010912","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0010912"}}}


id: GO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of a host protein via a direct interaction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host molecular function (obsolete GO:0052055)","synonyms":[{"name":"modification by symbiont of host molecular function","type":"exact"},{"name":"modification by symbiont of host protein function","type":"exact"}],"termid":"GO:0052055"}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: GO:0098639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any collagen binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen binding","termid":"GO:0005518"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515","GO:0098631"],"is_obsolete":false,"name":"collagen binding involved in cell-matrix adhesion","termid":"GO:0098639"}


id: PBO:0026866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","termid":"PBO:0026866"}


id: MONDO:1012903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the SOX10 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, SOX10-related, pig","secondary_identifiers":["OMIA:002453-9823"],"termid":"MONDO:1012903","xrefs":{"Monarch":{"xref_id":"1012903"}}}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: GO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pole plasm RNA localization","secondary_identifiers":["GO:0048116"],"synonyms":[{"name":"establishment and maintenance of pole plasm RNA localization","type":"exact"},{"name":"oocyte pole plasm RNA localization","type":"exact"},{"name":"pole plasm RNA localisation","type":"exact"}],"termid":"GO:0007316"}


id: MONDO:0021458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"penile neoplasm","termid":"MONDO:0006895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of penis","secondary_identifiers":["NCIT:C3489","UMLS:C0149627","ICD10CM:D29.0","SCTID:92286008","ICD9:222.1","icd11.foundation:561160219","MEDGEN:57435"],"synonyms":[{"name":"benign neoplasm of the penis","type":"exact"},{"name":"benign penile neoplasm","type":"exact"},{"name":"benign penile tumor","type":"exact"},{"name":"benign penile tumour","type":"exact"},{"name":"benign tumor of penis","type":"exact"},{"name":"benign tumor of the penis","type":"exact"},{"name":"benign tumour of penis","type":"exact"},{"name":"benign tumour of the penis","type":"exact"},{"name":"penis benign neoplasm","type":"exact"}],"termid":"MONDO:0021458","xrefs":{"Monarch":{"xref_id":"0021458"}}}


id: GO:0036086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.","definition_xrefs":["GOC:cjk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (obsolete GO:0036086)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to iron deficiency","type":"exact"}],"termid":"GO:0036086"}


id: PATO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000778 short term memory value (obsolete PATO:0000778)","termid":"PATO:0000778"}


id: PBO:0075773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 1","termid":"PBO:0075773"}


id: GO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-galactonate, the anion of D-galactonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-galactonate metabolic process","synonyms":[{"name":"D-galactonate metabolism","type":"exact"}],"termid":"GO:0034192"}


id: PBO:0083833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A","termid":"PBO:0083833"}


id: MONDO:0006258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic hamartomatous polyp that arises from the stomach and intestinal tract. It is characterized by the presence of tortuous and cystically dilated glands, edematous changes, and inflammation.","definition_xrefs":["NCIT:C3826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyp","secondary_identifiers":["UMLS:C0221273","EFO:1000310","MEDGEN:113158"],"synonyms":[{"name":"juvenile polyp","type":"exact"},{"name":"retention polyp","type":"exact"}],"termid":"MONDO:0006258","xrefs":{"Monarch":{"xref_id":"0006258"}}}


id: GO:0019315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-allose biosynthetic process","synonyms":[{"name":"D-allose anabolism","type":"exact"},{"name":"D-allose biosynthesis","type":"exact"},{"name":"D-allose formation","type":"exact"},{"name":"D-allose synthesis","type":"exact"}],"termid":"GO:0019315"}


id: MONDO:0022546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal cell nevus anodontia abnormal bone mineralization (obsolete MONDO:0022546)","termid":"MONDO:0022546","xrefs":{"Monarch":{"xref_id":"0022546"}}}


id: GO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + stipitatonate = CO2 + H+ + stipitatate.","definition_xrefs":["EC:4.1.1.60","RHEA:13885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"stipitatonate decarboxylase activity","secondary_identifiers":["MetaCyc:STIPITATONATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03739"],"synonyms":[{"name":"stipitatonate carboxy-lyase (decyclizing)","type":"related"},{"name":"stipitatonate carboxy-lyase (decyclizing, stipitatate-forming)","type":"related"}],"termid":"GO:0050296"}


id: PATO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000781 circulatory function value (obsolete PATO:0000781)","termid":"PATO:0000781"}


id: PBO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0018171"}


id: MONDO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Oncorhynchus mykiss.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete rainbow trout allergy (obsolete MONDO:0000793)","secondary_identifiers":["DOID:0060518"],"synonyms":[{"name":"Oncorhynchus mykiss allergic disease","type":"exact"},{"name":"Oncorhynchus mykiss allergy","type":"exact"},{"name":"Oncorhynchus mykiss caused allergic disease","type":"exact"},{"name":"allergy of Oncorhynchus mykiss","type":"exact"}],"termid":"MONDO:0000793","xrefs":{"Monarch":{"xref_id":"0000793"}}}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PBO:0086321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hect domain E3 ubiquitin-protein ligases; not essential for viability; found in association with Trf4 in TRAMP complex","termid":"PBO:0086321"}


id: PBO:0077505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 222","termid":"PBO:0077505"}


id: MONDO:1010654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, domestic cat","secondary_identifiers":["OMIA:000809-9685"],"termid":"MONDO:1010654","xrefs":{"Monarch":{"xref_id":"1010654"}}}


id: MONDO:0024532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 1","secondary_identifiers":["UMLS:C3714941","GARD:16502","OMIM:166780","MEDGEN:811516"],"synonyms":[{"name":"EYA1 otofaciocervical syndrome","type":"exact"},{"name":"OFC","type":"broad"},{"name":"OFC1","type":"related"},{"name":"OTFCS","type":"broad"},{"name":"otofaciocervical syndrome","type":"broad"},{"name":"otofaciocervical syndrome 1","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in EYA1","type":"exact"}],"termid":"MONDO:0024532","xrefs":{"Monarch":{"xref_id":"0024532"}}}


id: MONDO:0700047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoporosis occurring in premenopausal women with existing fragility fractures, diseases or treatments known to cause bone loss or fractures.","definition_xrefs":["PMID:28394826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"premenopausal osteoporosis","termid":"MONDO:0700047","xrefs":{"Monarch":{"xref_id":"0700047"}}}


id: SO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_downstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:near-gene-3","type":"exact"}],"termid":"SO:0002083"}


id: GO:0009208
data:
  {"annotated_genes":["SJAG_02887","SJAG_05024","SJAG_00533","SJAG_03676","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[92937,67792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[64537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009208","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null}}


id: PBO:0041973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 14","termid":"PBO:0041973"}


id: GO:0004809
data:
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id: PBO:0028298
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id: GO:0014802
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id: GO:0002619
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id: MONDO:0044986
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id: GO:0045095
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id: GO:1902790
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id: PR:O14065
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id: PBO:0113417
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id: MONDO:0004069
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id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: MONDO:0024945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the liver in non-human animals.","definition_xrefs":["MESH:D006520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis, non-human animal","synonyms":[{"name":"Hepatitides, animal","type":"related"},{"name":"animal Hepatitides","type":"related"},{"name":"animal Hepatitis","type":"related"}],"termid":"MONDO:0024945","xrefs":{"Monarch":{"xref_id":"0024945"}}}


id: PBO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 47","termid":"PBO:0071441"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: PBO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15","termid":"PBO:0072122"}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PomBase:mah","PMID:9649519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: MONDO:0971050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated optic neuritis","termid":"MONDO:0044688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"relapsing isolated optic neuritis","secondary_identifiers":["MEDGEN:1863611","UMLS:C5925139","Orphanet:659634"],"termid":"MONDO:0971050","xrefs":{"Monarch":{"xref_id":"0971050"}}}


id: MONDO:0700232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the KIZ gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"KIZ-related retinopathy","synonyms":[{"name":"KIZ-related retinopathy","type":"exact"}],"termid":"MONDO:0700232","xrefs":{"Monarch":{"xref_id":"0700232"}}}


id: GO:2000885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a galactoglucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactoglucomannan metabolic process","termid":"GO:0010392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactoglucomannan catabolic process","synonyms":[{"name":"galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000885"}


id: PBO:0091111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transmembrane transporter","termid":"PBO:0091111"}


id: GO:1905357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["PMID:27268497","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"negatively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"negative regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"down regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"down-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"downregulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"inhibition of snRNA pseudouridine synthesis","type":"narrow"}],"termid":"GO:1905357"}


id: MONDO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, severe type of vascular headache often associated with increased sympathetic activity, resulting in nausea, vomiting, and light sensitivity.","definition_xrefs":["NCIT:C89715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine disorder","secondary_identifiers":["MEDGEN:57451","MESH:D008881","UMLS:C0149931","ICD9:346.9","DOID:6364","ICD9:346"],"synonyms":[{"name":"migraine","type":"exact"},{"name":"migraine disorder","type":"exact"},{"name":"migraine headache","type":"exact"},{"name":"migraine variant","type":"exact"},{"name":"migraine with or without aura","type":"exact"}],"termid":"MONDO:0005277","xrefs":{"Monarch":{"xref_id":"0005277"}}}


id: PATO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's having thin, tail-like projections extending outwards from the cell body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ciliated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliatedness","termid":"PATO:0001408"}


id: PBO:0062258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 14","termid":"PBO:0062258"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: FYPO:0004278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased uracil DNA N-glycosylase activity","synonyms":[{"name":"reduced uracil DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004278"}


id: GO:0060498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands contributing to the formation of the primary lung bud.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in lung bud formation (obsolete GO:0060498)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in lung bud formation","type":"exact"}],"termid":"GO:0060498"}


id: PBO:0026990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrion","termid":"PBO:0026990"}


id: GO:0045303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-2,4-diaminobutyrate = L-aspartate 4-semialdehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.76","RHEA:11160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"diaminobutyrate-2-oxoglutarate transaminase activity","secondary_identifiers":["KEGG_REACTION:R06977","MetaCyc:R101-RXN"],"synonyms":[{"name":"2,4-diaminobutyrate 4-aminotransferase activity","type":"related"},{"name":"DAB aminotransferase activity","type":"related"},{"name":"DABA aminotransferase activity","type":"related"},{"name":"EctB","type":"related"},{"name":"L-2,4-diaminobutanoate:2-oxoglutarate 4-aminotransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate:2-oxoglutarate 4-aminotransferase activity","type":"related"},{"name":"diaminibutyric acid aminotransferase activity","type":"related"},{"name":"diaminobutyrate transaminase activity","type":"related"},{"name":"diaminobutyrate--2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0045303"}


id: MONDO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glioma that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain glioma","secondary_identifiers":["SCTID:254937005","UMLS:C0349661","MEDGEN:91163","NCIT:C162993","DOID:0060108"],"synonyms":[{"name":"brain malignant glioma","type":"exact"},{"name":"malignant glioma of brain","type":"exact"}],"termid":"MONDO:0005499","xrefs":{"Monarch":{"xref_id":"0005499"}}}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: PBO:0085109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1","termid":"PBO:0085109"}


id: PBO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 13","termid":"PBO:0046355"}


id: GO:2001153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal water transport","termid":"GO:2001151"},{"relation_name":"positively_regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal water transport","termid":"GO:2001153"}


id: GO:0141137
data:
  {"annotated_genes":["SJAG_00440","SJAG_00739","SJAG_00349","SJAG_02773","SJAG_02447","SJAG_02768","SJAG_00641","SJAG_03758","SJAG_03576","SJAG_03366","SJAG_02329","SJAG_02798","SJAG_05313","SJAG_04755","SJAG_02303","SJAG_01711","SJAG_03752","SJAG_03839","SJAG_05192","SJAG_04194","SJAG_02927","SJAG_02571","SJAG_00581","SJAG_03884","SJAG_01658","SJAG_03599","SJAG_05020","SJAG_03145","SJAG_01230","SJAG_01475","SJAG_04005","SJAG_00743","SJAG_00769","SJAG_04596","SJAG_02541","SJAG_04038","SJAG_03694","SJAG_02906","SJAG_02385","SJAG_01465","SJAG_00087","SJAG_00735","SJAG_04613","SJAG_04989","SJAG_03944","SJAG_03431","SJAG_01110","SJAG_00746","SJAG_03776","SJAG_00045","SJAG_01325","SJAG_01513","SJAG_03441","SJAG_04274","SJAG_03579","SJAG_02872","SJAG_01611","SJAG_01016","SJAG_00868","SJAG_00873","SJAG_00896","SJAG_04097","SJAG_00184","SJAG_04205","SJAG_04758","SJAG_03668","SJAG_02170","SJAG_07011","SJAG_02549","SJAG_02500","SJAG_02846","SJAG_01622","SJAG_02458","SJAG_03033","SJAG_02466","SJAG_02589","SJAG_01653","SJAG_04213","SJAG_01111","SJAG_02869","SJAG_00584","SJAG_02254","SJAG_01804","SJAG_04576","SJAG_03787","SJAG_03255","SJAG_02981","SJAG_02066","SJAG_02314","SJAG_00441"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115412,90552,100978,94105,105044,88829,93749,110625,117994,90673,114740,90659,98499,104572,105788,87936,88113,89751,91378,117644,115730,97811,94181,94091,117297,115426,98666,114253,95860,87757,92762,94278,107344,113150,93980,115280,94153,95421,111768,116931,88446,105639,109592,110490,117574,107696,107895,106763,116563,114242,103851,88296,103369,95867,109081,109360,113169,114415,94125,117596,92264,115032,97072,98231,95446,87610,103122,90028,102783,106915,107457,109484,112567,113339,94613,99392,89065,96424,96633,105036,108481,114326,116374,117481,93483,99142,89238,101566,116313,112994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic process that increases gene expression at specific genomic regions through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or the cytosine DNA demethylation.","definition_xrefs":["PMID:36618446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":90,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03255":null,"SJAG_03366":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of gene expression, epigenetic","type":"exact"},{"name":"up regulation of gene expression, epigenetic","type":"exact"},{"name":"up-regulation of gene expression, epigenetic","type":"exact"},{"name":"upregulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0141137","terms_by_termid":{"GO:0045815":null}}


id: FYPO:0003881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mtDNA level","termid":"FYPO:0003769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mtDNA absent from cell","synonyms":[{"name":"absent mtDNA","type":"exact"},{"name":"mitochondrial DNA absent from cell","type":"exact"},{"name":"mtDNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mtDNA absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003881"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_06613","SJAG_01551","SJAG_03952","SJAG_04289","SJAG_02553","SJAG_00772","SJAG_02250","SJAG_04369","SJAG_04153","SJAG_04084","SJAG_03179","SJAG_01818","SJAG_03745","SJAG_04916","SJAG_04006","SJAG_00897","SJAG_04321","SJAG_01191","SJAG_00965","SJAG_02374","SJAG_03234","SJAG_00722","SJAG_00854","SJAG_04492","SJAG_03425","SJAG_02644","SJAG_01581","SJAG_00882","SJAG_02275","SJAG_02830","SJAG_03789","SJAG_03796","SJAG_01623","SJAG_00955","SJAG_00081","SJAG_01521","SJAG_02993","SJAG_04582","SJAG_04818","SJAG_04174","SJAG_04824","SJAG_04524","SJAG_02547"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61551,63158,78167,78588,97970],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[94930,91663,71219,104116],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[118620,78224,94680,115419,105672,103129,74437,96474,104562,115331,70201,113506,105673,71689,104781,96773,71081,72887,109018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[89935,102084,71481,107466,71114,75005,72291,115466,79360,106476,115908,97230,70556,77477,98938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[107467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: MONDO:0006861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor mass composed of myeloblasts or immature myeloid cells. It occurs in extramedullary sites or the bone. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"myeloid sarcoma","secondary_identifiers":["GARD:12763","ICD9:205.3","ICDO:9930/3","icd11.foundation:921720320","UMLS:C4721505","icd11.foundation:1988933820","MedDRA:10028562","Orphanet:86850","ONCOTREE:MS","ICD10CM:C92.3","MEDGEN:1656669","MESH:D023981","NCIT:C3520","DOID:8683","EFO:1001052"],"synonyms":[{"name":"MS","type":"related"},{"name":"chloroma","type":"exact"},{"name":"extramedullary myeloid tumor","type":"exact"},{"name":"extramedullary myeloid tumour","type":"exact"},{"name":"granulocytic sarcoma","type":"related"},{"name":"myeloid sarcoma","type":"exact"},{"name":"sarcoma, myeloid, malignant","type":"exact"}],"termid":"MONDO:0006861","xrefs":{"Monarch":{"xref_id":"0006861"}}}


id: GO:0015855
data:
  {"annotated_genes":["SJAG_04714","SJAG_04717","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88045],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[88388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[95510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of pyrimidine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base transmembrane transport","type":"exact"},{"name":"pyrimidine base transport","type":"exact"},{"name":"pyrimidine transmembrane transport","type":"related"},{"name":"pyrimidine transport","type":"related"}],"termid":"GO:0015855","terms_by_termid":{"GO:0098721":null,"GO:1904082":null,"GO:1905530":null}}


id: PR:Q92338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc1 gene.","definition_xrefs":["UniProtKB:Q92338","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ABC1 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.18","synonyms":[{"name":"Spom972h-abc1","type":"exact"}],"termid":"PR:Q92338"}


id: MONDO:0007396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stanescu type dysostosis is a rare form of osteosclerosis.","definition_xrefs":["Orphanet:1798"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysostosis, Stanescu type","secondary_identifiers":["MEDGEN:140931","UMLS:C0432263","GARD:2016","MESH:C562974","OMIM:122900","SCTID:254124008"],"synonyms":[{"name":"Stanescu osteosclerosis","type":"exact"},{"name":"autosomal dominant osteosclerosis, Stanescu type","type":"exact"},{"name":"craniofacial dysostosis with diaphyseal hyperplasia","type":"related"},{"name":"craniofacial dysostosis-diaphyseal hyperplasia syndrome","type":"exact"},{"name":"dysostosis Stanescu type","type":"related"},{"name":"osteosclerosis, Stanescu type","type":"related"}],"termid":"MONDO:0007396","xrefs":{"Monarch":{"xref_id":"0007396"}}}


id: MONDO:1011178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, Japanese quail","secondary_identifiers":["OMIA:000755-93934"],"termid":"MONDO:1011178","xrefs":{"Monarch":{"xref_id":"1011178"}}}


id: GO:0060650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland bud epithelial cells, resulting in the elongation of the bud.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"},{"relation_name":"part_of","term_name":"mammary gland bud elongation","termid":"GO:0060649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}


id: PBO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 2 Y-linked","termid":"PBO:0044033"}


id: GO:2000361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prostaglandin-E synthase activity (obsolete GO:2000361)","synonyms":[{"name":"regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"regulation of PGE isomerase activity","type":"exact"},{"name":"regulation of PGE2 isomerase activity","type":"exact"},{"name":"regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"regulation of endoperoxide isomerase activity","type":"exact"},{"name":"regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000361"}


id: GO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4-alpha-methyl-delta7-sterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy,delta7-sterol + 3 NADP+ + 3 H2O.","definition_xrefs":["GOC:pr","PMID:14653780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4-alpha-methyl-delta7-sterol oxidation","synonyms":[{"name":"4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080065"}


id: FYPO:0004687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lovastatin. Cells stop growing (and may die) at a concentration of lovastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to lovastatin","synonyms":[{"name":"hypersensitive to lovastatin","type":"exact"},{"name":"sensitive to lovastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to lovastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004687"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0140096","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: PBO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein (predicted)","termid":"PBO:0002444"}


id: GO:0042450
data:
  {"annotated_genes":["SJAG_01592","SJAG_00695","SJAG_00636","SJAG_00412","SJAG_00635","SJAG_01461","SJAG_04577","SJAG_00392","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70071,78429,98151,102626,106530,110479,111090,111920,118415],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: PBO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 6","termid":"PBO:0043709"}


id: GO:2000327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000327)","synonyms":[{"name":"positive regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"positive regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000327"}


id: MONDO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Renal Glucosuria (FRG) is characterized by the presence of persistent isolated glucosuria in the absence of both generalized proximal tubular dysfunction and hyperglycemia. FRG is usually considered a benign entity as most patients are not affected by severe clinical consequences. Polyuria and enuresis and later a mild growth and pubertal maturation delay are the only manifestations that have been reported during a follow-up period of 30 years. Episodic dehydration and ketosis during pregnancy and starvation and an increased incidence of urinary tract infections have occasionally been reported in severe cases. FRG is caused by loss-of-function mutations in the gene SLC5A2 (16p11.2).","definition_xrefs":["Orphanet:69076"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0037792"],"is_obsolete":false,"name":"familial renal glucosuria","secondary_identifiers":["UMLS:C3245525","MESH:D006030","ICD9:271.4","DOID:9432","GARD:7548","MEDGEN:757652","OMIM:233100","icd11.foundation:381783069","NORD:1658","SCTID:267430007","MedDRA:10038457"],"synonyms":[{"name":"GLYS","type":"related"},{"name":"Glys1","type":"related"},{"name":"Renal Glycosuria","type":"exact"},{"name":"SGLT2 deficiency","type":"exact"},{"name":"familial renal glucosuria","type":"exact"},{"name":"glycosuria, renal","type":"related"},{"name":"renal diabetes","type":"exact"},{"name":"renal glucosuria","type":"related"},{"name":"renal glycosuria","type":"related"}],"termid":"MONDO:0009297","xrefs":{"Monarch":{"xref_id":"0009297"}}}


id: GO:0032885
data:
  {"annotated_genes":["SJAG_04666","SJAG_01255","SJAG_04509","SJAG_01787","SJAG_04771","SJAG_00424","SJAG_03705","SJAG_00610","SJAG_02278","SJAG_04659","SJAG_01376","SJAG_04462","SJAG_00963","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78839,77122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[87472,92389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[92373,105358,90733,105930,117938,118063,102848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[102850,89394,94910,92395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032885","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural cell adhesion molecule 2","termid":"PBO:0060594"}


id: GO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin collar in pathogenic fungi involved in the constriction of hyphae at the plant plasmodesma enabling penetration of an adjacent cell.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin collar","termid":"GO:0032173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphae septin collar","synonyms":[{"name":"septin collar of invasive hyphae","type":"related"}],"termid":"GO:0062140"}


id: PBO:0063501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase catalytic subunit 2","termid":"PBO:0063501"}


id: MONDO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the larynx. It is the most common histologic type of laryngeal carcinoma. It can arise from the glottis, supraglottic area, or it can be transglottic. Glottic squamous cell carcinoma is the most frequent laryngeal carcinoma in the United States. The symptoms, clinical behavior and the prognosis depend on the site of origin within the larynx.","definition_xrefs":["NCIT:C4044"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare otorhinolaryngologic tumor (obsolete MONDO:0020035)","termid":"MONDO:0020035"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal squamous cell carcinoma","secondary_identifiers":["EFO:0006352","GARD:17908","UMLS:C0280324","MEDGEN:83630","Orphanet:494550","SCTID:405822008","DOID:2876","ONCOTREE:LXSC"],"synonyms":[{"name":"LXSC","type":"related"},{"name":"epidermoid carcinoma of larynx","type":"exact"},{"name":"epidermoid carcinoma of the larynx","type":"exact"},{"name":"laryngeal epidermoid carcinoma","type":"exact"},{"name":"laryngeal squamous cell carcinoma","type":"exact"},{"name":"laryngeal throat squamous cell cancer","type":"exact"},{"name":"larynx epidermoid carcinoma","type":"exact"},{"name":"larynx squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of larynx","type":"exact"},{"name":"squamous cell carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0005595","xrefs":{"Monarch":{"xref_id":"0005595"}}}


id: GO:0141221
data:
  {"annotated_genes":["SJAG_03844","SJAG_00581","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63865,109486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[109487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[109488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[109489,97207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[109490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[109491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-acetyl-L-lysyl-[histone] = acetate + L-lysyl-[histone].","definition_xrefs":["PMID:28450737","RHEA:58196","PMID:24691964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0033558","GO:0016810","GO:0019213","GO:0003674"],"is_obsolete":false,"name":"histone deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.98","MetaCyc:3.5.1.98-RXN"],"synonyms":[{"name":"histone deacetylase activity","type":"broad"},{"name":"histone deacetylase activity, NAD-independent","type":"exact"}],"termid":"GO:0141221","terms_by_termid":{"GO:0031078":null,"GO:0032129":null,"GO:0034739":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: GO:1903210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glomerular visceral epithelial cell.","definition_xrefs":["GO_REF:0000085","PMID:23515840","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte apoptotic process","synonyms":[{"name":"glomerular podocyte apoptosis","type":"narrow"},{"name":"glomerular podocyte apoptotic process","type":"exact"},{"name":"glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"podocyte apoptosis","type":"narrow"}],"termid":"GO:1903210"}


id: GO:0006351
data:
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id: MONDO:1012741
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id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: PBO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q4","termid":"PBO:0043659"}


id: PBO:0065473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 11","termid":"PBO:0065473"}


id: PATO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001094 absolute flux value (obsolete PATO:0001094)","termid":"PATO:0001094"}


id: PBO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(p16.1)","termid":"PBO:0047876"}


id: MONDO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"idiopathic granulomatous myositis","secondary_identifiers":["Orphanet:206979","DOID:3428","NCIT:C27575","MEDGEN:235204","UMLS:C1334150"],"synonyms":[{"name":"granulomatous myositis","type":"related"},{"name":"idiopathic granulomatous myositis","type":"exact"}],"termid":"MONDO:0002644","xrefs":{"Monarch":{"xref_id":"0002644"}}}


id: PBO:0056718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha","termid":"PBO:0056718"}


id: PATO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001003 relative alternation value (obsolete PATO:0001003)","termid":"PATO:0001003"}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: PBO:0085681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteasomal and 40S ribosomal subunit biogenesis; required for cleavage of the 20S pre-rRNA to generate the mature 18S rRNA; cleavage is activated by Fun12p, a GTPase and translation initiation factor; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085681"}


id: PBO:0081161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein 2","termid":"PBO:0081161"}


id: GO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the response to osmotic stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to osmotic stress","termid":"GO:0047484"}


id: PBO:0012521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_of","termid":"PBO:0012521"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: PR:O94455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.14c gene.","definition_xrefs":["UniProtKB:O94455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C1687.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.14c","synonyms":[{"name":"Spom972h-SPAC1687.14c","type":"exact"}],"termid":"PR:O94455"}


id: GO:0103107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: castasterone + UDP-alpha-D-glucose = castasterone-23-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete castasterone 23-O-glucosyltransferase activity (obsolete GO:0103107)","termid":"GO:0103107"}


id: PBO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad1","termid":"PBO:0003554"}


id: GO:0098630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together of unicellular organisms in suspension form aggregates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation of unicellular organisms","synonyms":[{"name":"aggregation of single cell organisms","type":"exact"}],"termid":"GO:0098630"}


id: GO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a neutral pH (pH close to 7) stimulus.","definition_xrefs":["GOC:di","PMID:6374461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}


id: GO:0170012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone H3 position 18] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone H3] + nicotinamide.","definition_xrefs":["PMID:34927582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016746","GO:0016787","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H3K18 decrotonylase activity","termid":"GO:0170012"}


id: PBO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39","termid":"PBO:0071701"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PomBase:mah","PMID:30279276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0041695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator 1","termid":"PBO:0041695"}


id: PBO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Raptor homolog Mip1","termid":"PBO:0001017"}


id: GO:0031653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism releases excess heat to the environment, thereby lowering its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat dissipation","termid":"GO:0031653"}


id: GO:1904227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycogen synthase activity, transferring glucose-1-phosphate.","definition_xrefs":["PMID:17569761","GOC:BHF","GO_REF:0000059","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen synthase activity, transferring glucose-1-phosphate","synonyms":[{"name":"down regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"down-regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"downregulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"inhibition of glycogen synthase activity, transferring glucose-1-phosphate","type":"narrow"}],"termid":"GO:1904227"}


id: PBO:0091452
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human QNG1","termid":"PBO:0091452"}


id: PBO:0004430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex eta subunit Cct7","termid":"PBO:0004430"}


id: PATO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000744 balance value (obsolete PATO:0000744)","termid":"PATO:0000744"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD4 production","termid":"GO:0045223"},{"relation_name":"positively_regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4 production","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: GO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation","termid":"GO:0034305"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"}


id: GO:0072760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a GW 7647 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to GW 7647","termid":"GO:1901593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to GW 7647","termid":"GO:0072760"}


id: PBO:0063375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCYT1B antisense RNA 1","termid":"PBO:0063375"}


id: PBO:0063101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6G antisense RNA 1","termid":"PBO:0063101"}


id: PBO:0090707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga5","termid":"PBO:0090707"}


id: MONDO:0009138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysosteosclerosis is a skeletal dysplasia characterized by progressive osteosclerosis and platyspondyly.","definition_xrefs":["Orphanet:1782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysosteosclerosis","secondary_identifiers":["GARD:2012","ICD9:756.9","icd11.foundation:1853176074","MEDGEN:98150","NANDO:2201365","OMIM:224300","SCTID:254123002","UMLS:C0432262","MESH:C562973"],"synonyms":[{"name":"dysosteosclerosis","type":"exact"}],"termid":"MONDO:0009138","xrefs":{"Monarch":{"xref_id":"0009138"}}}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: MONDO:0044322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual developmental disorder with neuropsychiatric features is an autosomal recessive disorder characterized by moderate intellectual disability, relatively mild seizures, and neuropsychiatric abnormalities, such as anxiety, obsessive-compulsive behavior, and autistic features. Mild facial dysmorphic features may also be present (summary by {2:Srour et al., 2017}).","definition_xrefs":["OMIM:617532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with neuropsychiatric features","secondary_identifiers":["UMLS:C4479636","MEDGEN:1379216"],"synonyms":[{"name":"IDDNPF","type":"related"},{"name":"intellectual developmental disorder with neuropsychiatric features","type":"exact"}],"termid":"MONDO:0044322","xrefs":{"Monarch":{"xref_id":"0044322"}}}


id: GO:0070874
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78839,77122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"negatively_regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"negative regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070874","terms_by_termid":{"GO:0045719":null}}


id: FYPO:0007776
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119342,119352,119364,119368,119373,119376,119412,119415,119590],"is_not":false,"summary":null,"term":"FYPO:0007776"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are shorter than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00610":null,"SJAG_02013":null,"SJAG_02527":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":9,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"decreased hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00124","SJAG_02527","SJAG_02013","SJAG_04697","SJAG_00610"],"single_locus_genotype_uniquenames":["pyp1delta","gms1delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pmk1delta","pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","SJAG_00124delta"],"synonyms":[{"name":"short hyphae","type":"exact"}],"termid":"FYPO:0007776","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007776":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA1","termid":"PBO:0060593"}


id: PBO:0065199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 divergent transcript","termid":"PBO:0065199"}


id: PBO:0075805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 4, pseudogene","termid":"PBO:0075805"}


id: PBO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase","termid":"PBO:0002436"}


id: PBO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3 (predicted)","termid":"PBO:0004871"}


id: PBO:0042305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD22 molecule","termid":"PBO:0042305"}


id: _global:causally_upstream_of_or_within,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_negative_effect","secondary_identifiers":["RO:0004046"],"termid":"_global:causally_upstream_of_or_within,_negative_effect"}


id: GO:0014857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["CL:0000188","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"}


id: GO:0051110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine uridylylation, to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (obsolete GO:0051110)","termid":"GO:0051110"}


id: PBO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene","termid":"PBO:0071536"}


id: PR:000059625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner kinetochore subunit cnp20 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-3, Thr-8, Ser-12, Ser-13, Ser-14, Thr-21, Ser-23, Thr-29, Ser-31, Ser-33, Thr-36, Ser-39, Thr-43, and Thr-45 of the amino acid sequence represented by UniProtKB:Q9HGK9. Example: UniProtKB:Q9HGK9, Ser-3/Ser-12/Ser-13/Ser-14/Ser-23/Ser-31/Ser-33/Ser-39, MOD:00046|Thr-8/Thr-21/Thr-29/Thr-36/Thr-43/Thr-45, MOD:00047.","definition_xrefs":["PomBase:VW","PMID:34810257","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cnp20/Phos-CIM","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Cnp20/Phos-CIM","type":"exact"},{"name":"PomBase_original_PRO_term_name: inner kinetochore subunit cnp20 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp20/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HGK9, Ser-3/Ser-12/Ser-13/Ser-14/Ser-23/Ser-31/Ser-33/Ser-39, MOD:00046|Thr-8/Thr-21/Thr-29/Thr-36/Thr-43/Thr-45, MOD:00047","type":"narrow"}],"termid":"PR:000059625"}


id: GO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.","definition_xrefs":["RHEA:34415","PMID:3944058","PMID:8515237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-diketocamphane 1,2-monooxygenase","secondary_identifiers":["EC:1.14.14.108","UM-BBD_enzymeID:r0428","MetaCyc:R543-RXN"],"synonyms":[{"name":"(+)-camphor,reduced-rubredoxin:oxygen oxidoreductase (1,2-lactonizing)","type":"related"},{"name":"2,5-diketocamphane lactonizing enzyme activity","type":"related"},{"name":"camphor 1,2-monooxygenase activity","type":"exact"},{"name":"camphor ketolactonase I activity","type":"related"}],"termid":"GO:0018684"}


id: PBO:0080714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing, antisense to TP73","termid":"PBO:0080714"}


id: MONDO:0010571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of otopalatodigital syndrome spectrum disorder, and is characterized by dysmorphic facies, severe skeletal dysplasia affecting the axial and appendicular skeleton, extraskeletal anomalies (including malformations of the brain, heart, genitourinary system, and intestine) and poor survival.","definition_xrefs":["Orphanet:90652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 2","secondary_identifiers":["UMLS:C1844696","OMIM:304120","NORD:1539","MESH:C538089","GARD:5802","icd11.foundation:1897308206","ICD9:759.89","SCTID:42432003","MEDGEN:337064","DOID:0111784"],"synonyms":[{"name":"Andre syndrome","type":"related"},{"name":"FPO","type":"related"},{"name":"OPD 2 syndrome","type":"exact"},{"name":"OPD II syndrome","type":"exact"},{"name":"OPD syndrome 2","type":"exact"},{"name":"OPD2","type":"related"},{"name":"Otopalatodigital Syndrome Type I and II","type":"exact"},{"name":"cranio-oro-digital syndrome","type":"related"},{"name":"cranioorodigital syndrome","type":"related"},{"name":"faciopalatoosseous syndrome","type":"related"},{"name":"oto-palato-digital syndrome type 2","type":"related"},{"name":"otopalatodigital syndrome, type 2","type":"related"},{"name":"otopalatodigital syndrome, type II","type":"related"},{"name":"otopalatodigital syndrome, type II, X-linked dominant","type":"exact"}],"termid":"MONDO:0010571","xrefs":{"Monarch":{"xref_id":"0010571"}}}


id: GO:0060840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery development","termid":"GO:0060840"}


id: PATO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000809 taste value (obsolete PATO:0000809)","termid":"PATO:0000809"}


id: MONDO:0859358
data:
  {"annotated_genes":["SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85518],"is_not":false,"summary":null,"term":"MONDO:0859358"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2H","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824069","UMLS:C5774296","OMIM:620203"],"termid":"MONDO:0859358","terms_by_termid":{"MONDO:0859358":null},"xrefs":{"Monarch":{"xref_id":"0859358"}}}


id: PBO:0054266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1651","termid":"PBO:0054266"}


id: PBO:0027608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bis(5'-nucleosyl)-tetraphosphatase_(asymmetrical)_activity","termid":"PBO:0027608"}


id: GO:0060025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic activity, the controlled release of neurotransmitters into the synaptic cleft and their subsequent detection by a postsynaptic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"part_of","term_name":"regulation of synapse structure or activity","termid":"GO:0050803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic activity","termid":"GO:0060025"}


id: PBO:0056882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 2","termid":"PBO:0056882"}


id: PBO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0030157"}


id: MOD:01624
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an asparagine and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the release of ammonia.","definition_xrefs":["RESID:AA0441#ASN","PubMed:2015294","PubMed:10801322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asn)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asn-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:01624"}


id: MONDO:1012364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Laron dwarfism, non-human animal","termid":"MONDO:1011958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, pig","secondary_identifiers":["OMIA:001323-9823"],"termid":"MONDO:1012364","xrefs":{"Monarch":{"xref_id":"1012364"}}}


id: PBO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 1","termid":"PBO:0048133"}


id: PBO:0039939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 2","termid":"PBO:0039939"}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: MONDO:0005918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal placentation in which the placenta implants in the lower segment of the uterus (the zone of dilation) and may cover part or all of the opening of the cervix. It is often associated with serious antepartum bleeding and premature labor.","definition_xrefs":["MESH:D010923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta praevia","secondary_identifiers":["UMLS:C0032046","MEDGEN:10782","SCTID:36813001","DOID:11060","EFO:0007442","NCIT:C26858"],"synonyms":[{"name":"placenta praevia","type":"exact"},{"name":"placenta previa","type":"exact"}],"termid":"MONDO:0005918","xrefs":{"Monarch":{"xref_id":"0005918"}}}


id: PBO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 10","termid":"PBO:0048240"}


id: MOD:00142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phytochromobilin.","definition_xrefs":["PubMed:1634523","PubMed:16593380","PubMed:3208761","ChEBI:15619","PubMed:7918400","RESID:AA0133","Unimod:389#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phytochromobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-1,2,3,19,22,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phytochromobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"Phytochromobilin","type":"related"},{"name":"S-phytochromobilin-L-cysteine","type":"exact"},{"name":"phytochrome chromophore","type":"exact"},{"name":"phytochromobilin","type":"related"},{"name":"phytochromobilin cysteine adduct","type":"exact"}],"termid":"MOD:00142"}


id: PBO:0053542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 547","termid":"PBO:0053542"}


id: PBO:0027158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_alanine_level","termid":"PBO:0027158"}


id: GO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"negative regulation of NOD1 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070429"}


id: MONDO:0006585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin findings arising from repeated rubbing, picking or scratching of a real or imagined irritation of the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurodermatitis","secondary_identifiers":["SCTID:267854005","UMLS:C0027822","DOID:3309","EFO:1000740","MEDGEN:45056","MESH:D009450","NCIT:C111963"],"synonyms":[{"name":"lichen simplex Chronicus","type":"exact"}],"termid":"MONDO:0006585","xrefs":{"Monarch":{"xref_id":"0006585"}}}


id: MONDO:0010075
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86701],"is_not":false,"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any spondyloepimetaphyseal dysplasia with joint laxity in which the cause of the disease is a mutation in the B3GALT6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:271640","Orphanet:642099","UMLS:C4017377","MEDGEN:865814","DOID:0112198"],"synonyms":[{"name":"B3GALT6 spondyloepimetaphyseal dysplasia with joint laxity","type":"exact"},{"name":"SEMDJL","type":"broad"},{"name":"SEMDJL1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 1, with or without fractures","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity caused by mutation in B3GALT6","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, Beighton type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","type":"exact"}],"termid":"MONDO:0010075","terms_by_termid":{"MONDO:0010075":null},"xrefs":{"Monarch":{"xref_id":"0010075"}}}


id: MONDO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 26 with or without anosmia","secondary_identifiers":["OMIM:619718","UMLS:C5676903","MEDGEN:1811919"],"synonyms":[{"name":"HH26","type":"exact"}],"termid":"MONDO:0030534","xrefs":{"Monarch":{"xref_id":"0030534"}}}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_05197","SJAG_01823","SJAG_01010","SJAG_02199","SJAG_04210","SJAG_04190","SJAG_02690","SJAG_05232","SJAG_00863","SJAG_00272","SJAG_02818","SJAG_01762","SJAG_04879","SJAG_00874","SJAG_02908","SJAG_03495","SJAG_00884","SJAG_02667","SJAG_03780","SJAG_04877","SJAG_00729","SJAG_00618","SJAG_00198","SJAG_02294","SJAG_02182","SJAG_00814","SJAG_04183","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70797,73182,77347],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[109958,112290,113585,115431,70178,112531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[74811,70185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[104229,109123,104945,102830,95208,118215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[107365,104230,95209,89530,93932,106998,95241,104946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[101507,100612,72246,92621,100648,95028,104155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["GOC:mah","ISBN:0815316194","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69190"],"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: FYECO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under semi-anaerobic conditions, where the level of oxygen is lower than normal.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-aerobic environment","synonyms":[{"name":"hypoxia","type":"related"},{"name":"hypoxic environment","type":"related"},{"name":"limited O atoms","type":"related"},{"name":"limited oxygen","type":"related"},{"name":"reduced oxygen level","type":"related"},{"name":"semi aerobic environment","type":"exact"},{"name":"semi-anaerobic environment","type":"exact"},{"name":"semiaerobic environment","type":"exact"},{"name":"semianaerobic environment","type":"exact"}],"termid":"FYECO:0000135"}


id: GO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycourobilin to phycoerythrins.","definition_xrefs":["RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycourobilin linkage","termid":"GO:0017010"}


id: MONDO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by multiple cessations of respirations during sleep that induce partial arousals and interfere with the maintenance of sleep.","definition_xrefs":["MESH:D012891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep apnea syndrome","secondary_identifiers":["ICD9:780.57","DOID:0050847","SCTID:73430006","HP:0010535","MEDGEN:11458","SCTID:111489007","NCIT:C148023","UMLS:C0037315","ICD10CM:G47.3","EFO:0003877"],"synonyms":[{"name":"SDB","type":"exact"},{"name":"apnea syndrome, sleep","type":"related"},{"name":"apnea syndromes, sleep","type":"related"},{"name":"apnea, sleep","type":"related"},{"name":"apneas, sleep","type":"related"},{"name":"breathing, sleep-disordered","type":"related"},{"name":"breathing-related sleep disorder","type":"broad"},{"name":"hypersomnia with periodic respiration","type":"related"},{"name":"hypopnea, sleep","type":"related"},{"name":"hypopneas, sleep","type":"related"},{"name":"mixed central and obstructive sleep apnea","type":"related"},{"name":"mixed sleep Apneas","type":"related"},{"name":"mixed sleep apnea","type":"related"},{"name":"sleep apnea","type":"exact"},{"name":"sleep apnea syndrome","type":"exact"},{"name":"sleep apnea, mixed","type":"related"},{"name":"sleep apnea, mixed central and obstructive","type":"related"},{"name":"sleep apneas","type":"exact"},{"name":"sleep apneas, mixed","type":"related"},{"name":"sleep disordered breathing","type":"exact"},{"name":"sleep hypopnea","type":"related"},{"name":"sleep hypopneas","type":"related"},{"name":"sleep-disordered breathing","type":"exact"}],"termid":"MONDO:0005296","xrefs":{"Monarch":{"xref_id":"0005296"}}}


id: MONDO:0015865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign tumor of fallopian tubes (obsolete MONDO:0015865)","termid":"MONDO:0015865","xrefs":{"Monarch":{"xref_id":"0015865"}}}


id: PBO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase (predicted)","termid":"PBO:0003323"}


id: PBO:0029079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029079"}


id: MONDO:0013853
data:
  {"annotated_genes":["SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86273],"is_not":false,"summary":null,"term":"MONDO:0013853"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the EXOSC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 1","termid":"MONDO:0016396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0006025","MONDO:0005066","MONDO:0037792","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15834","MEDGEN:766363","UMLS:C3553449","DOID:0060266","OMIM:614678"],"synonyms":[{"name":"EXOSC3 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH1B","type":"related"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in EXOSC3","type":"exact"},{"name":"pontocerebellar hypoplasia type 1B","type":"exact"},{"name":"pontocerebellar hypoplasia, type 1B","type":"related"}],"termid":"MONDO:0013853","terms_by_termid":{"MONDO:0013853":null},"xrefs":{"Monarch":{"xref_id":"0013853"}}}


id: MONDO:1012592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in dogs due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, dog","secondary_identifiers":["OMIA:000202-9615"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Canis lupus familiaris (dog)","type":"exact"}],"termid":"MONDO:1012592","xrefs":{"Monarch":{"xref_id":"1012592"}}}


id: PBO:0053220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGALSL divergent transcript","termid":"PBO:0053220"}


id: GO:0097534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lymphoid lineage cell from one site to another. A lymphoid lineage cell, also called a lymphoid lineage restricted progenitor cell, is a progenitor cell restricted to the lymphoid lineage.","definition_xrefs":["GOC:pr","PMID:22342843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration","synonyms":[{"name":"lymphoid lineage restricted progenitor cell migration","type":"exact"}],"termid":"GO:0097534"}


id: MONDO:0100362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 2 infectious disease that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes labialis","termid":"MONDO:0043653"},{"relation_name":"is_a","term_name":"herpes simplex type 2 infectious disease","termid":"MONDO:0100360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip herpes simplex type 2 infectious disorder","termid":"MONDO:0100362","xrefs":{"Monarch":{"xref_id":"0100362"}}}


id: GO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-2.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-2 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS2 complex","type":"narrow"}],"termid":"GO:0071070"}


id: PBO:0049394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 10","termid":"PBO:0049394"}


id: GO:0102168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenazine-1-carboxylate + S-adenosyl-L-methionine = 5-methyl-phenazine-1-carboxylate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:49112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"5-methyl-phenazine-1-carboxylate N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11897","EC:2.1.1.327"],"termid":"GO:0102168"}


id: GO:0060792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sweat gland over time, from its formation to the mature structure. Sweat glands secrete an aqueous solution that is used in thermoregulation.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sweat gland development","termid":"GO:0060792"}


id: GO:1990866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to sustained hypoxia (obsolete GO:1990866)","termid":"GO:1990866"}


id: MOD:00782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-acetyl-L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-leucine","synonyms":[{"name":"AcLeu","type":"exact"}],"termid":"MOD:00782"}


id: PBO:0054688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2097","termid":"PBO:0054688"}


id: PBO:0038321
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_curator","termid":"PBO:0038321"}


id: PBO:0027458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_morphology","termid":"PBO:0027458"}


id: MONDO:0018605
data:
  {"annotated_genes":["SJAG_00070","SJAG_03934","SJAG_04263","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012073"},{"annotations":[86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011624"},{"annotations":[86076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014881"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02297":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"disorders of pentose/polyol metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21841","UMLS:C5681188","MEDGEN:1843151","Orphanet:440701"],"termid":"MONDO:0018605","terms_by_termid":{"MONDO:0010480":null,"MONDO:0011624":null,"MONDO:0012073":null,"MONDO:0014881":null},"xrefs":{"Monarch":{"xref_id":"0018605"}}}


id: GO:0106140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-TEFb complex.","definition_xrefs":["PMID:18391197","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"P-TEFb complex binding","termid":"GO:0106140"}


id: MONDO:0014472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic fever-infantile enterocolitis-autoinflammatory syndrome","secondary_identifiers":["MEDGEN:863504","OMIM:616050","NANDO:2200459","Orphanet:436166","NORD:1939","GARD:17725","UMLS:C4015067","NANDO:1200994"],"synonyms":[{"name":"AIFEC","type":"related"},{"name":"AUTOINFLAMMATION with infantile enterocolitis","type":"related"},{"name":"Autoinflammation with Infantile Enterocolitis","type":"exact"},{"name":"NLRC4-related MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with macrophage activation syndrome","type":"exact"},{"name":"NLRC4-related infantile enterocolitis-autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related macrophage activation syndrome","type":"exact"},{"name":"autoinflammation with infantile enterocolitis","type":"exact"}],"termid":"MONDO:0014472","xrefs":{"Monarch":{"xref_id":"0014472"}}}


id: MONDO:1012955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary malformation of the skeletal system in non-human animals.","definition_xrefs":["PMID:23696895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnomelia syndrome, non-human animal","termid":"MONDO:1012955","xrefs":{"Monarch":{"xref_id":"1012955"}}}


id: FYPO:0008306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at layte origins.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from late origin","termid":"FYPO:0008306"}


id: GO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a single-stranded small RNA is incorporated within the RNA-initiated silencing complex (RISC). The assembly includes the maturation of the small RNA, the stabilization of the complex by accessory proteins of the RISC complex, duplex separation and the release of the second strand, forming a base-pairing complement complex that mediates gene silencing by small RNA.","definition_xrefs":["PMID:19239886","PMID:14744438","PMID:14512631","PMID:22233755","PMID:27184117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"RISC complex assembly","secondary_identifiers":["GO:0035087","GO:0070923","GO:0035280"],"synonyms":[{"name":"RISC assembly","type":"related"},{"name":"gene silencing by RNA, small RNA loading onto RISC","type":"related"},{"name":"miRISC assembly","type":"broad"},{"name":"miRNA loading onto RISC","type":"narrow"},{"name":"siRNA loading onto RISC involved in RNA interference","type":"narrow"},{"name":"siRNA loading onto RISC involved in gene silencing by small RNA","type":"narrow"},{"name":"small RNA loading onto RISC","type":"related"}],"termid":"GO:0070922"}


id: PBO:0078875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor GATA binding 1","termid":"PBO:0078875"}


id: FYPO:0002762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, spheroid cell","synonyms":[{"name":"inviable after spore germination, undivided spheroid cell","type":"exact"},{"name":"inviable following spore germination, without cell division, spheroid cell","type":"exact"},{"name":"inviable germinated spore, without cell division, spheroid cell","type":"exact"},{"name":"lethal after spore germination, without cell division, spheroid cell","type":"exact"}],"termid":"FYPO:0002762"}


id: PBO:0048951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 2","termid":"PBO:0048951"}


id: MONDO:0005965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the spinal canal.","definition_xrefs":["MESH:D013130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis","secondary_identifiers":["DOID:6725","UMLS:C1861329","HP:0003416","SCTID:18347007","NANDO:1200372","icd11.foundation:1847895828","NCIT:C177444","EFO:0007490","ICD9:724.09","SCTID:76107001","MEDGEN:396107","ICD9:723.0","ICD9:724.00"],"synonyms":[{"name":"cervical spinal stenosis","type":"narrow"},{"name":"lumbar spinal stenosis","type":"narrow"},{"name":"spinal stenosis of lumbar region","type":"narrow"}],"termid":"MONDO:0005965","xrefs":{"Monarch":{"xref_id":"0005965"}}}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: GO:0051445
data:
  {"annotated_genes":["SJAG_02771","SJAG_04280","SJAG_06638","SJAG_02169","SJAG_01837","SJAG_00993","SJAG_01680","SJAG_03887","SJAG_01311","SJAG_00457","SJAG_04853","SJAG_02481","SJAG_03486","SJAG_03048","SJAG_05153","SJAG_01345","SJAG_01401","SJAG_01515","SJAG_02404","SJAG_03525","SJAG_02592","SJAG_04332","SJAG_04682","SJAG_02723","SJAG_04126","SJAG_01113","SJAG_03327","SJAG_01000","SJAG_03371","SJAG_05288","SJAG_04259","SJAG_04140","SJAG_04813","SJAG_00987","SJAG_01956","SJAG_03720","SJAG_04287","SJAG_03438","SJAG_01330","SJAG_03501","SJAG_00145","SJAG_00266","SJAG_00364","SJAG_03854","SJAG_02712","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89768,92106,93268,94346,104333],"is_not":false,"summary":null,"term":"GO:0051445"},{"annotations":[107982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[95127,90304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[114518,106330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116085,106628,91396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[114278,116086,106629,89014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[75209,116694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[111214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[105826,102366,105984,106662,109281,118395,104446],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[70452,78439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[116407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[98691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[107985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[102294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[116510,118261],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[73455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[89015,116259,102378,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[113804],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[107068,119119,97031,119118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051446"},{"annotations":[95130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[89016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[92156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"},{"annotations":[94514,101628,104927,109060],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0110044"},{"annotations":[101341],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[96923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate or extent of progression through the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic cell 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of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic cell cycle modulation","type":"exact"},{"name":"meiotic cell cycle regulation","type":"exact"},{"name":"meiotic cell cycle regulator","type":"related"},{"name":"modulation of meiotic cell cycle progression","type":"exact"},{"name":"regulation of meiotic cell cycle progression","type":"exact"},{"name":"regulation of progression through meiotic cell cycle","type":"exact"}],"termid":"GO:0051445","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0045128":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051598":null,"GO:0051728":null,"GO:0075296":null,"GO:0075297":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null,"GO:1902103":null,"GO:1903024":null,"GO:1904514":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PR:Q9UUH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leptin receptor overlapping transcript-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.11","secondary_identifiers":["UniProtKB:Q9UUH1"],"synonyms":[{"name":"Spom972h-LEPROTL1","type":"exact"}],"termid":"PR:Q9UUH1"}


id: MONDO:0009011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constriction rings syndrome (obsolete MONDO:0009011)","termid":"MONDO:0009011","xrefs":{"Monarch":{"xref_id":"0009011"}}}


id: PBO:0072408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 13","termid":"PBO:0072408"}


id: PR:O14267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C7D4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.12c","synonyms":[{"name":"Spom972h-SPAC7D4.12c","type":"exact"}],"termid":"PR:O14267"}


id: PBO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 35","termid":"PBO:0072506"}


id: PBO:0053722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 934","termid":"PBO:0053722"}


id: GO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"third ventricle development","termid":"GO:0021678"}


id: GO:0071583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane transport","termid":"GO:0071580"},{"relation_name":"is_a","term_name":"negative regulation of zinc ion transport","termid":"GO:0071582"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of zinc ion transmembrane transport","synonyms":[{"name":"negative regulation of zinc ion membrane transport","type":"exact"}],"termid":"GO:0071583"}


id: PBO:0091293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA initiator Methionine","termid":"PBO:0091293"}


id: FYECO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cycloheximide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cycloheximide","synonyms":[{"name":"+ CHX","type":"exact"}],"termid":"FYECO:0000257"}


id: PR:Q9P6M2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.03c gene.","definition_xrefs":["UniProtKB:Q9P6M2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.03c","synonyms":[{"name":"Spom972h-SPAC688.03c","type":"exact"}],"termid":"PR:Q9P6M2"}


id: PBO:0067590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 751, pseudogene","termid":"PBO:0067590"}


id: PBO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 8","termid":"PBO:0045818"}


id: FYPO:0006615
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119432,119433],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a greater diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"single_locus_genotype_uniquenames":["rga6delta","rga4delta"],"synonyms":[{"name":"increased cell thickness","type":"exact"},{"name":"increased cell width","type":"exact"}],"termid":"FYPO:0006615","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0111315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PRR repeat protein, implicated in mitochondrial gene expression","termid":"PBO:0111315"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_04609","SJAG_01809","SJAG_03838","SJAG_01114","SJAG_00379","SJAG_03029","SJAG_00858","SJAG_02282","SJAG_00916","SJAG_04565","SJAG_03915","SJAG_03970","SJAG_01516","SJAG_00144","SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95691],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[118914,94866,91257,112802,101132,113022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[69926,106426,113024,107058,109595,77396,95119,108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[88043],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_03029":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: GO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"},{"relation_name":"part_of","term_name":"in utero embryonic development","termid":"GO:0001701"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic placenta development","synonyms":[{"name":"fetal placenta development","type":"exact"}],"termid":"GO:0001892"}


id: PBO:0012277
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe methyltransferase","termid":"PBO:0012277"}


id: MONDO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 20","secondary_identifiers":["DOID:0112023","MEDGEN:208677","GARD:22667","MESH:C563142","OMIM:300047","UMLS:C0796226"],"synonyms":[{"name":"MRX20","type":"exact"},{"name":"intellectual disability, X-linked 20","type":"exact"},{"name":"mental retardation, X-linked 20","type":"related"}],"termid":"MONDO:0010231","xrefs":{"Monarch":{"xref_id":"0010231"}}}


id: PATO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two parts, roughly spherical and of equal size, connected by a bar.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dumbbell-shaped","termid":"PATO:0001876"}


id: MONDO:1040037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the IMPG1 gene.","definition_xrefs":["PMID:23993198","PMID:28644393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"IMPG1-related recessive retinopathy","synonyms":[{"name":"IMPG1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040037","xrefs":{"Monarch":{"xref_id":"1040037"}}}


id: PBO:0017027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat Mark1","termid":"PBO:0017027"}


id: MONDO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal epididymo-orchitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"gonococcal epididymo-orchitis","termid":"MONDO:0021158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal epididymo-orchitis","secondary_identifiers":["UMLS:C0153193","DOID:10802","SCTID:30168008","ICD9:098.13","MEDGEN:509195"],"synonyms":[{"name":"gonococcal epididymo-orchitis (acute)","type":"exact"},{"name":"gonococcal epididymo-orchitis, acute","type":"exact"}],"termid":"MONDO:0001125","xrefs":{"Monarch":{"xref_id":"0001125"}}}


id: PBO:0075926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 18","termid":"PBO:0075926"}


id: PBO:0064618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU domain class 5, transcription factor 2","termid":"PBO:0064618"}


id: PBO:0088654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3","termid":"PBO:0088654"}


id: GO:1990096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion.","definition_xrefs":["GOC:kmv","PMID:16166371","PMID:12869585"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to superoxide (obsolete GO:1990096)","termid":"GO:1990096"}


id: MONDO:0019344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Antisynthetase (AS) syndrome is a clinically heterogeneous form of idiopathic inflammatory myopathy characterized by myositis, arthralgia, Raynaud phenomenon, mechanic hands, interstitial lung disease (ILD), and serum autoantibodies to aminoacyl transfer RNA synthetases (anti-ARS).","definition_xrefs":["Orphanet:81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"antisynthetase syndrome","secondary_identifiers":["MESH:C537778","DOID:0080744","icd11.foundation:1572057936","ICD9:279.49","MEDGEN:388567","GARD:735","NORD:1926","EFO:1001982","MedDRA:10068801","SCTID:445187004","UMLS:C2609059"],"synonyms":[{"name":"AS syndrome","type":"exact"},{"name":"anti-Jo1 syndrome","type":"exact"}],"termid":"MONDO:0019344","xrefs":{"Monarch":{"xref_id":"0019344"}}}


id: SO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region forming a motif, composed of adenines, where the minor groove edges are inserted into the minor groove of another helix.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_minor_RNA_motif","synonyms":[{"name":"A minor RNA motif","type":"exact"}],"termid":"SO:0000022"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: GO:0019137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thioglucoside + H2O = a thiol + a sugar.","definition_xrefs":["EC:3.2.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"thioglucosidase activity","secondary_identifiers":["MetaCyc:RXN-9946"],"synonyms":[{"name":"myrosinase activity","type":"exact"},{"name":"sinigrase activity","type":"exact"},{"name":"sinigrinase activity","type":"exact"},{"name":"thioglucoside glucohydrolase activity","type":"exact"}],"termid":"GO:0019137"}


id: PBO:0065527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTCHD1 antisense RNA (head to head)","termid":"PBO:0065527"}


id: PBO:0077766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 2","termid":"PBO:0077766"}


id: PBO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corin, serine peptidase","termid":"PBO:0043671"}


id: PBO:0062733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily D member 1","termid":"PBO:0062733"}


id: PBO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000987)","termid":"PBO:0030750"}


id: FYPO:0007011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at non-coding RNA genes","type":"exact"}],"termid":"FYPO:0007011"}


id: MONDO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the fallopian tube. Representative examples include papilloma, adenofibroma, and leiomyoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube benign neoplasm","secondary_identifiers":["Orphanet:180237","MEDGEN:83416","NCIT:C4517","DOID:0060111","SCTID:92100009","UMLS:C0346190","MedDRA:10053865"],"synonyms":[{"name":"benign fallopian tube neoplasm","type":"exact"},{"name":"benign fallopian tube tumor","type":"exact"},{"name":"benign fallopian tube tumour","type":"exact"},{"name":"benign neoplasm of fallopian tube","type":"exact"},{"name":"benign neoplasm of the fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tubes","type":"exact"},{"name":"benign tumor of the fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tubes","type":"exact"},{"name":"benign tumour of the fallopian tube","type":"exact"},{"name":"fallopian tube benign neoplasm","type":"exact"},{"name":"fallopian tube neoplasm, benign","type":"exact"},{"name":"fallopian tube tumor, benign","type":"exact"}],"termid":"MONDO:0000645","xrefs":{"Monarch":{"xref_id":"0000645"}}}


id: GO:1900158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bone mineralization","termid":"GO:0030502"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"negatively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"down regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"down-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"downregulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"inhibition of bone mineralization involved in bone maturation","type":"narrow"}],"termid":"GO:1900158"}


id: MONDO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse replacement of the lung tissue by connective tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse pulmonary fibrosis","secondary_identifiers":["UMLS:C0865849","DOID:5641","MEDGEN:167847","NCIT:C27216"],"termid":"MONDO:0003563","xrefs":{"Monarch":{"xref_id":"0003563"}}}


id: GO:0098045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus baseplate.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus baseplate assembly","termid":"GO:0098045"}


id: GO:0009269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to desiccation","synonyms":[{"name":"desiccation tolerance","type":"related"}],"termid":"GO:0009269"}


id: GO:2001049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tendon cell differentiation","synonyms":[{"name":"regulation of muscle attachment cell differentiation","type":"exact"},{"name":"regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001049"}


id: PBO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 3","termid":"PBO:0050866"}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: PBO:0072279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 8","termid":"PBO:0072279"}


id: PBO:0067489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 623, pseudogene","termid":"PBO:0067489"}


id: PBO:0068945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 189, pseudogene","termid":"PBO:0068945"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: PBO:0041224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 21","termid":"PBO:0041224"}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: GO:0008666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = L-2-succinylamino-6-oxopimelate + CoA.","definition_xrefs":["EC:2.3.1.117","RHEA:17325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","secondary_identifiers":["MetaCyc:TETHYDPICSUCC-RXN","KEGG_REACTION:R04365"],"synonyms":[{"name":"THDP N-succinyltransferase activity","type":"exact"},{"name":"succinyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate succinylase activity","type":"related"},{"name":"tetrahydrodipicolinate succinyltransferase activity","type":"related"},{"name":"tetrahydropicolinate succinylase activity","type":"related"}],"termid":"GO:0008666"}


id: GO:0021536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diencephalon development","termid":"GO:0021536"}


id: PBO:0063871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C","termid":"PBO:0063871"}


id: PBO:0034509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_mitotic_interphase","termid":"PBO:0034509"}


id: GO:0031379
data:
  {"annotated_genes":["SJAG_02725","SJAG_03193","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69874,71829,118006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses RNA-directed RNA polymerase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase complex","termid":"GO:0030880"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031379","terms_by_termid":{"GO:0031380":null}}


id: PBO:0069141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: PBO:0042823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 2","termid":"PBO:0042823"}


id: PBO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 1","termid":"PBO:0043846"}


id: PBO:0061574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 beta (pseudogene)","termid":"PBO:0061574"}


id: PBO:0111923
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0111923"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: GO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein via L-cysteinyl molybdopterin.","definition_xrefs":["RESID:AA0142"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-cysteinyl molybdopterin (obsolete GO:0018292)","termid":"GO:0018292"}


id: PBO:0089186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mia40-Erv1 disulfide relay system sulfhydryl oxidase subunit Erv1","termid":"PBO:0089186"}


id: PBO:0080728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW and C2 domain containing 2","termid":"PBO:0080728"}


id: PBO:0038587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA carboxylase alpha","termid":"PBO:0038587"}


id: PATO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000026 carbohydrate composition (obsolete PATO:0000026)","termid":"PATO:0000026"}


id: PBO:0086701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy","termid":"PBO:0086701"}


id: GO:0097125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin B1-CDK1 complex","termid":"GO:0097125"}


id: PBO:0069703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 983, pseudogene","termid":"PBO:0069703"}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: GO:0000285
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72453],"is_not":false,"summary":null,"term":"GO:0000285"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + ADP + H+.","definition_xrefs":["RHEA:13609","EC:2.7.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1676168","Reactome:R-HSA-1676134","KEGG_REACTION:R05802","Reactome:R-HSA-1675921","MetaCyc:2.7.1.150-RXN","Reactome:R-HSA-1675910"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-3-phosphate 5-phosphotransferase activity","type":"related"},{"name":"phosphatidylinositol 3-phosphate 5-kinase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate 5-kinase activity","type":"exact"},{"name":"type III PIP kinase activity","type":"related"}],"termid":"GO:0000285","terms_by_termid":{"GO:0000285":null}}


id: GO:0110031
data:
  {"annotated_genes":["SJAG_03854","SJAG_04280","SJAG_04287","SJAG_02771","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70452,78439],"is_not":false,"summary":null,"term":"GO:0110031"},{"annotations":[91396,106628,116085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:25492408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110030"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/MI transition of meiotic cell cycle","termid":"GO:0008315"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110031","terms_by_termid":{"GO:0033315":null,"GO:0110031":null}}


id: PBO:0086844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxal kinase; a key enzyme in vitamin B6 metabolism; involved in bud-site selection; diploid mutants display a random rather than a bipolar budding pattern; similarity to yeast BUD16 and human pyridoxal kinase (PDXK)","termid":"PBO:0086844"}


id: PBO:0054513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1913","termid":"PBO:0054513"}


id: MONDO:0800383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 34","secondary_identifiers":["MEDGEN:1612206","UMLS:C4539386"],"synonyms":[{"name":"JBTS34","type":"exact"}],"termid":"MONDO:0800383","xrefs":{"Monarch":{"xref_id":"0800383"}}}


id: MONDO:0035447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic disease characterized by the presence of ten or more hepatocellular adenomas in a background of normal appearing hepatic parenchyma. The majority of reported cases are female. There is no association with steroid use. The condition is considered benign, although the risk of complications (such as malignant transformation or spontaneous rupture with intraperitoneal hemorrhage) is much higher than in isolated hepatic adenoma. Hepatocellular carcinoma develops in less than 10% of cases.","definition_xrefs":["Orphanet:566841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver adenomatosis","secondary_identifiers":["GARD:22278","ICD10CM:D13.4","MEDGEN:1803906","UMLS:C5680136"],"synonyms":[{"name":"Hepatic adenomatosis","type":"exact"}],"termid":"MONDO:0035447","xrefs":{"Monarch":{"xref_id":"0035447"}}}


id: PBO:0088521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5","termid":"PBO:0088521"}


id: PBO:0116792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliated left-right organizer protein containing ZP-N domains","termid":"PBO:0116792"}


id: PBO:0089367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Asr1","termid":"PBO:0089367"}


id: GO:1905390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GO_REF:0000071","PMID:14656734","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leukotriene B4","termid":"GO:1905389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leukotriene B4","synonyms":[{"name":"cellular response to LTB4","type":"exact"}],"termid":"GO:1905390"}


id: FYPO:0000749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to selenite ((SeO3)2-) ions. Cells stop growing (and may die) at a concentration of selenite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to selenite ion","synonyms":[{"name":"hypersensitive to selenite ion","type":"exact"},{"name":"sensitive to selenite ion during mitotic cell cycle","type":"related"},{"name":"sensitive to selenite ion during vegetative growth","type":"exact"},{"name":"sensitive to selenite ions","type":"exact"},{"name":"sensitive to selenium","type":"related"}],"termid":"FYPO:0000749"}


id: PBO:0077786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II beta","termid":"PBO:0077786"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: PBO:0074372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with aspartate rich tail 1","termid":"PBO:0074372"}


id: MONDO:0007376
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86365],"is_not":false,"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"Fleck corneal dystrophy (FCD) is a rare generally asymptomatic form of stromal corneal dystrophy characterized by multiple asymptomatic, non-progressive opacities disseminated throughout the corneal stroma with no effect on visual acuity.","definition_xrefs":["Orphanet:98970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fleck corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:371.56","icd11.foundation:607143324","SCTID:417183007","MEDGEN:287065","DOID:0060448","MESH:C563256","OMIM:121850","GARD:16879","UMLS:C1562113"],"synonyms":[{"name":"Cfd","type":"related"},{"name":"FCD","type":"exact"},{"name":"FranC'ois-Neetens speckled corneal dystrophy","type":"exact"},{"name":"Francois-Neetens speckled corneal dystrophy","type":"exact"},{"name":"François-Neetens speckled corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, FLECK","type":"related"},{"name":"corneal dystrophy, Francois-Neetens speckled or flecked","type":"related"},{"name":"corneal fleck dystrophy","type":"exact"},{"name":"fleck corneal dystrophy","type":"exact"}],"termid":"MONDO:0007376","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0007376"}}}


id: FYPO:0000296
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119437],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[119380,119452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119546],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119302],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119270,119582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119438],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the organization of the actin cytoskeleton. Actin cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and associated proteins.","definition_xrefs":["GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_01143","SJAG_04280","SJAG_03596","SJAG_02392"],"name":"actin cytoskeleton organization phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_01143","SJAG_04522","SJAG_02392","SJAG_03596","SJAG_04280","SJAG_02592"],"single_locus_genotype_uniquenames":["rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","for3delta","mid1delta","pom1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"actin cytoskeleton organisation phenotype","type":"exact"},{"name":"actin cytoskeleton organization phenotype during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton organization phenotype during vegetative growth","type":"exact"},{"name":"fission yeast actin cytoskeleton organization phenotype","type":"exact"}],"termid":"FYPO:0000296","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0011010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Matthew-Wood syndrome is a rare clinical entity including as main characteristics anophthalmia or severe microphthalmia, and pulmonary hypoplasia or aplasia.","definition_xrefs":["Orphanet:2470"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Matthew-Wood syndrome","secondary_identifiers":["OMIM:601186","GARD:713","MEDGEN:318679","DOID:0111807","MESH:C537768","DOID:0050819","SCTID:722458000","UMLS:C1832661"],"synonyms":[{"name":"MCOPS9","type":"exact"},{"name":"Matthew Wood syndrome","type":"related"},{"name":"Matthew-Wood syndrome","type":"exact"},{"name":"anophthalmia, clinical, with mild Facial Dysmorphism and variable malformations of the lung, heart, and diaphragm","type":"related"},{"name":"anophthalmia-pulmonary hypoplasia syndrome","type":"exact"},{"name":"anophthalmia/microphthalmia and pulmonary hypoplasia","type":"related"},{"name":"clinical anophthalmia mild facial dysmorphism lung heart and diaphragm malformations","type":"related"},{"name":"microphthalmia syndromic 9","type":"related"},{"name":"microphthalmia syndromic type 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 8","type":"related"},{"name":"microphthalmia, syndromic 9","type":"related"},{"name":"microphthalmia, syndromic type 9","type":"exact"},{"name":"pulmonary Hypoplasia-diaphragmatic hernia-anophthalmia-Cardiac defect","type":"related"},{"name":"pulmonary agenesis microphthalmi and diaphragmatic defect","type":"related"},{"name":"pulmonary agenesis, microphthalmia, and diaphragmatic defect","type":"related"},{"name":"spear syndrome","type":"related"},{"name":"syndromic microphthalmia type 9","type":"exact"}],"termid":"MONDO:0011010","xrefs":{"Monarch":{"xref_id":"0011010"}}}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["GOC:mah","Wikipedia:Cofactor_F430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: PBO:0081552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 471","termid":"PBO:0081552"}


id: PBO:0044932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase theta","termid":"PBO:0044932"}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PBO:0040437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 2","termid":"PBO:0040437"}


id: GO:0103083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(4'-methylthio)butylmalate = 3-(4'-methylthio)butylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate isomerase activity (obsolete GO:0103083)","termid":"GO:0103083"}


id: PBO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identical paralog","termid":"PBO:0001888"}


id: MONDO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hypothyroidism (obsolete MONDO:0000311)","termid":"MONDO:0000311","xrefs":{"Monarch":{"xref_id":"0000311"}}}


id: PBO:0053270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A3","termid":"PBO:0053270"}


id: GO:0004457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"},{"annotations":[80311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004457","terms_by_termid":{"GO:0004458":null,"GO:0008720":null}}


id: MONDO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"corticosterone methyloxidase type 1 deficiency","secondary_identifiers":["UMLS:C0268293","DOID:0080626","MEDGEN:82784","OMIM:203400","SCTID:47757001","GARD:5660"],"synonyms":[{"name":"18 Hydroxylase deficiency","type":"related"},{"name":"18 alpha hydroxylase deficiency","type":"related"},{"name":"18-Hydroxylase deficiency","type":"related"},{"name":"18-hydroxycorticosterone dehydrogenase deficiency","type":"related"},{"name":"18-hydroxylase deficiency","type":"related"},{"name":"CAH - 18-hydroxylase deficiency","type":"related"},{"name":"CMO 1 deficiency","type":"related"},{"name":"CMO I deficiency","type":"related"},{"name":"CMO II deficiency","type":"related"},{"name":"aldosterone deficiency 1","type":"related"},{"name":"aldosterone deficiency due to 18-hydroxylase defect","type":"related"},{"name":"aldosterone deficiency due to 18-hydroxysteroid dehydrogenase deficiency","type":"related"},{"name":"aldosterone deficiency due to defect in 18 hydroxylase","type":"related"},{"name":"aldosterone deficiency due to defect in steroid 18-Hydroxylase","type":"related"},{"name":"corticosterone 18-monooxygenase deficiency","type":"exact"},{"name":"corticosterone methyl oxidase type I deficiency","type":"related"},{"name":"corticosterone methyl oxidase type II deficiency","type":"related"},{"name":"corticosterone methyloxidase type 1 deficiency","type":"exact"},{"name":"corticosterone methyloxidase type I deficiency","type":"related"},{"name":"hyperreninemic hypoaldosteronism, familial, 1","type":"related"},{"name":"hypoaldosteronism, congenital, due to cmo i deficiency","type":"exact"},{"name":"steroid 18-hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008751","xrefs":{"Monarch":{"xref_id":"0008751"}}}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: GO:0019187
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.","definition_xrefs":["PMID:8166646","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"termid":"GO:0019187","terms_by_termid":{"GO:0004578":null}}


id: GO:0021631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the optic nerve is generated and organized. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve morphogenesis","synonyms":[{"name":"CN II morphogenesis","type":"related"}],"termid":"GO:0021631"}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: GO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"positively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine uptake","synonyms":[{"name":"activation of epinephrine uptake","type":"narrow"},{"name":"positive regulation of adrenaline uptake","type":"exact"},{"name":"positive regulation of epinephrine import","type":"exact"},{"name":"stimulation of epinephrine uptake","type":"narrow"},{"name":"up regulation of epinephrine uptake","type":"exact"},{"name":"up-regulation of epinephrine uptake","type":"exact"},{"name":"upregulation of epinephrine uptake","type":"exact"}],"termid":"GO:0051628"}


id: SO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000244 four_cutter_restriction_site (obsolete SO:0000244)","synonyms":[{"name":"4-cutter_restriction_site","type":"related"},{"name":"four-cutter_restriction_sit","type":"related"}],"termid":"SO:0000244"}


id: MONDO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia in which the blasts lack sufficient evidence to classify as myeloid or lymphoid or they have morphologic and/or immunophenotypic characteristics of both myeloid and lymphoid cells. (WHO, 2001)","definition_xrefs":["NCIT:C7464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute leukemia of ambiguous lineage","secondary_identifiers":["MEDGEN:226983","Orphanet:86851","MedDRA:10067399","UMLS:C1301357","NANDO:2200017","icd11.foundation:1062906118","GARD:8638","NANDO:2200018","SCTID:721308005"],"synonyms":[{"name":"ALL with myeloid markers","type":"related"},{"name":"AML with lymphoid markers","type":"related"},{"name":"BAL","type":"related"},{"name":"acute leukaemia of indeterminate lineage","type":"exact"},{"name":"acute leukaemia of undetermined lineage","type":"related"},{"name":"acute leukemia of ambiguous lineage","type":"exact"},{"name":"acute leukemia of indeterminate lineage","type":"exact"},{"name":"acute leukemia of undetermined lineage","type":"related"},{"name":"biphenotypic acute leukaemia","type":"related"},{"name":"biphenotypic acute leukemia","type":"related"},{"name":"hybrid acute leukaemia","type":"exact"},{"name":"hybrid acute leukemia","type":"exact"},{"name":"mixed lineage acute leukaemia","type":"exact"},{"name":"mixed lineage acute leukemia","type":"exact"},{"name":"mixed phenotype acute leukaemia","type":"related"},{"name":"mixed phenotype acute leukemia","type":"related"}],"termid":"MONDO:0019460","xrefs":{"Monarch":{"xref_id":"0019460"}}}


id: SO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_hydroxynorvalylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_hydroxynorvalylcarbamoyladenosine","secondary_identifiers":["RNAMOD:014"],"synonyms":[{"name":"N6 hydroxynorvalylcarbamoyladenosine","type":"exact"},{"name":"N6-hydroxynorvalylcarbamoyladenosine","type":"exact"},{"name":"hn6A","type":"exact"}],"termid":"SO:0001308"}


id: GO:0102806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + cyanin betaine = shisonin + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroyl-CoA:cyanidin-3,5-diglucoside-6''-O-acyltransferase activity (obsolete GO:0102806)","termid":"GO:0102806"}


id: PBO:0050553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papillomavirus (type 18) integration site 2","termid":"PBO:0050553"}


id: GO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of substances between any membrane of a cell, including the plasma membrane and its regions.","definition_xrefs":["GOC:pr","GOC:ai","PMID:10671554"],"gene_count":0,"genotype_count":0,"name":"obsolete intermembrane transport (obsolete GO:0046909)","termid":"GO:0046909"}


id: PBO:0005743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Npp106","termid":"PBO:0005743"}


id: PBO:0110193
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_first_submitted_timestamp","termid":"PBO:0110193"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: GO:0032971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of muscle filament sliding","termid":"GO:0032971"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: MONDO:0019941
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024309"},{"annotations":[85776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013634"}]},"cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 2 (HSAN2) is an inherited disorder characterized by profound and universal sensory loss involving large and small fiber nerves, and marked hypotonia.","definition_xrefs":["Orphanet:970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5574675","MEDGEN:1800880","PMID:21089229","GARD:3976","DOID:0070161","NORD:1235","SCTID:398148000"],"synonyms":[{"name":"Giaccai type acroosteolysis","type":"related"},{"name":"HSAN2","type":"exact"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type II","type":"exact"},{"name":"autosomal recessive sensory radicular neuropathy","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type II","type":"exact"},{"name":"hereditary sensory neuropathy type 2","type":"related"},{"name":"hereditary sensory radicular neuropathy, recessive form","type":"related"},{"name":"neurogenic acroosteolysis","type":"exact"}],"termid":"MONDO:0019941","terms_by_termid":{"MONDO:0013634":null,"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0019941"}}}


id: PBO:0079548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1","termid":"PBO:0079548"}


id: MONDO:0010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata","secondary_identifiers":["MEDGEN:538019","UMLS:C0263627","DOID:0060292"],"synonyms":[{"name":"CPXD","type":"exact"},{"name":"X-linked dominant chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, X-linked","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant","type":"related"},{"name":"chondrodystrophia calcificans congenita","type":"exact"}],"termid":"MONDO:0010556","xrefs":{"Monarch":{"xref_id":"0010556"}}}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["GOC:signaling","PMID:17615392"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: PBO:0073831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 7","termid":"PBO:0073831"}


id: GO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly, arrangement, or disassembly of cytoskeletal structures that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"cytoskeletal rearrangement involved in phagocytosis, engulfment","termid":"GO:0060097"}


id: PATO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised posteriorly","termid":"PATO:0001922"}


id: GO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of peptidyl-thyronine from peptidyl-tyrosine in thyroglobulin by phenyl transfer coupled with the formation of peptidyl-dehydroalanine.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine biosynthetic process from peptidyl-tyrosine (obsolete GO:0019879)","synonyms":[{"name":"peptidyl-thyronine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0019879"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: GO:0030559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification guide activity","termid":"GO:0030556"},{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"rRNA pseudouridylation guide activity","termid":"GO:0030559"}


id: MONDO:0006954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic fever (obsolete MONDO:0006954)","termid":"MONDO:0006954","xrefs":{"Monarch":{"xref_id":"0006954"}}}


id: GO:0051250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"negatively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte activation","synonyms":[{"name":"down regulation of lymphocyte activation","type":"exact"},{"name":"down-regulation of lymphocyte activation","type":"exact"},{"name":"downregulation of lymphocyte activation","type":"exact"},{"name":"inhibition of lymphocyte activation","type":"narrow"}],"termid":"GO:0051250"}


id: MONDO:0957556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins atresia or stenosis","termid":"MONDO:0017864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary vein atresia","secondary_identifiers":["MEDGEN:576417","UMLS:C0344679","Orphanet:99126"],"termid":"MONDO:0957556","xrefs":{"Monarch":{"xref_id":"0957556"}}}


id: GO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:rph","PMID:20570858","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}


id: PBO:0067964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 266","termid":"PBO:0067964"}


id: PBO:0040009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 17A","termid":"PBO:0040009"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0001217","GO:0003700","GO:0140110"],"is_obsolete":false,"name":"ligand-modulated transcription repressor activity","synonyms":[{"name":"ligand-activated transcription repressor activity","type":"narrow"}],"termid":"GO:0141096"}


id: GO:0051269
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91782],"is_not":false,"summary":null,"term":"GO:0051269"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-ketoester + H+ + NADPH = (R)-hydroxy ester + NADP+.","definition_xrefs":["RHEA:80767","PMID:15564669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoester reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051269","terms_by_termid":{"GO:0051269":null}}


id: PBO:0081994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 25","termid":"PBO:0081994"}


id: PBO:0045817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 7","termid":"PBO:0045817"}


id: MONDO:0021324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the abdominal part of esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal cancer","termid":"MONDO:0007576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant neoplasm of abdominal esophagus","secondary_identifiers":["SCTID:187724003","NCIT:C4764","MEDGEN:141675","UMLS:C0496775","ICD9:150.2"],"synonyms":[{"name":"abdominal part of esophagus cancer","type":"exact"},{"name":"abdominal part of oesophagus cancer","type":"exact"},{"name":"cancer of abdominal part of esophagus","type":"exact"},{"name":"cancer of abdominal part of oesophagus","type":"exact"},{"name":"malignant abdominal part of esophagus neoplasm","type":"exact"},{"name":"malignant abdominal part of oesophagus neoplasm","type":"exact"},{"name":"malignant neoplasm of abdominal part of esophagus","type":"exact"},{"name":"malignant neoplasm of abdominal part of oesophagus","type":"exact"},{"name":"malignant neoplasm of the abdominal esophagus","type":"exact"},{"name":"malignant neoplasm of the abdominal oesophagus","type":"exact"},{"name":"malignant tumor of the abdominal esophagus","type":"exact"},{"name":"malignant tumour of the abdominal oesophagus","type":"exact"}],"termid":"MONDO:0021324","xrefs":{"Monarch":{"xref_id":"0021324"}}}


id: GO:1905320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26846297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: MONDO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lymphatic part of lymphoid system","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymphatic system cancer","secondary_identifiers":["DOID:0060073"],"synonyms":[{"name":"cancer of lymphatic part of lymphoid system","type":"exact"},{"name":"lymphatic part of lymphoid system cancer","type":"exact"},{"name":"malignant lymphatic part of lymphoid system neoplasm","type":"exact"},{"name":"malignant neoplasm of lymphatic part of lymphoid system","type":"exact"}],"termid":"MONDO:0000612","xrefs":{"Monarch":{"xref_id":"0000612"}}}


id: MONDO:0012713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, East African type","secondary_identifiers":["MEDGEN:388701","MESH:C535796","OMIM:611702","UMLS:C2673686","DOID:0112302","GARD:4992"],"synonyms":[{"name":"spondylometaphyseal dysplasia East-African type","type":"related"},{"name":"spondylometaphyseal dysplasia, East African type","type":"exact"}],"termid":"MONDO:0012713","xrefs":{"Monarch":{"xref_id":"0012713"}}}


id: GO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenosine receptor signaling pathway","termid":"GO:0060167"},{"relation_name":"positively_regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenosine receptor signaling pathway","synonyms":[{"name":"positive regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060168"}


id: PBO:0089852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery protein Mms19","termid":"PBO:0089852"}


id: PBO:0056399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE3 antisense RNA 1","termid":"PBO:0056399"}


id: MONDO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast nipple and areola cancer","secondary_identifiers":["ICD9:174.0","SCTID:188147009","MEDGEN:507933","UMLS:C0024621","DOID:11889"],"synonyms":[{"name":"malignant neoplasm of nipple and areola of female breast","type":"exact"},{"name":"malignant neoplasm of nipple or areola of female breast","type":"exact"}],"termid":"MONDO:0001401","xrefs":{"Monarch":{"xref_id":"0001401"}}}


id: PBO:0088079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin (Ub) chain assembly factor (E4); forms branched Ub chains on substrates destined for degradation, catalyzing K48-linked multi-monoubiquitination of K29-linked Ub chains assembled by the Ub-ligase Ufd4p; involved in the Ub-fusion degradation pathway, OLE membrane fluidity pathway, stress response survival and the ERAD pathway for misfolded proteins, where it promotes ubiquitination and transfer of ERAD substrates to Rad23p; U-box family member; homologous to human Ufd2a and Ufd2b","termid":"PBO:0088079"}


id: GO:0031210
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69718],"is_not":false,"summary":null,"term":"GO:0031210"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylcholine, a glycophospholipid in which a phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylcholine binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031210","terms_by_termid":{"GO:0031210":null}}


id: PBO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: PBO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 2","termid":"PBO:0047574"}


id: MONDO:0005009
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86598,86597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.","definition_xrefs":["NCIT:C3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congestive heart failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:42343007","UMLS:C0018802","ICD9:404.01","MEDGEN:9169","ICD9:404.13","EFO:0000373","ICD9:428","DOID:6000","icd11.foundation:2136808878","ICD9:404.11","ICD9:428.0","ICD9:428.9"],"synonyms":[{"name":"CHF","type":"exact"},{"name":"cardiac failure, congestive","type":"exact"},{"name":"congestive heart disease","type":"exact"},{"name":"failure, congestive heart","type":"exact"},{"name":"heart failure, congestive","type":"exact"},{"name":"weak heart","type":"exact"}],"termid":"MONDO:0005009","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0005009"}}}


id: MONDO:0031415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carey-Fineman-Ziter syndrome","secondary_identifiers":["icd11.foundation:1784462638","UMLS:C1850746","MEDGEN:338115","GARD:3889","OMIMPS:254940","Orphanet:1358"],"termid":"MONDO:0031415","xrefs":{"Monarch":{"xref_id":"0031415"}}}


id: PBO:0030585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysine_level","termid":"PBO:0030585"}


id: PBO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase (predicted)","termid":"PBO:0002285"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: PBO:0038810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 17","termid":"PBO:0038810"}


id: PBO:0054908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2322","termid":"PBO:0054908"}


id: GO:0048362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage metabolic process","synonyms":[{"name":"pedicel mucilage metabolism","type":"exact"}],"termid":"GO:0048362"}


id: MOD:00385
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and a glycine residue to form L-asparagine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0380","PubMed:10504696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,3-diamino-3-oxopropyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,3-diamino-3-oxopropyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Asn-Gly)","type":"exact"},{"name":"L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"Zoanthus sp. fluorescent protein FP506 chromophore","type":"exact"},{"name":"[2-(1,3-diamino-3-oxopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"asparaginyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00385"}


id: MONDO:0021320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the mouth floor.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"neoplasm of floor of mouth","termid":"MONDO:0021383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant tumor of floor of mouth","secondary_identifiers":["SCTID:363385007","ICD9:144.9","NCIT:C9318","UMLS:C0153368","ICD9:144.8","MEDGEN:102264"],"synonyms":[{"name":"cancer of mouth floor","type":"exact"},{"name":"malignant floor of mouth neoplasm","type":"exact"},{"name":"malignant floor of mouth tumor","type":"exact"},{"name":"malignant floor of mouth tumour","type":"exact"},{"name":"malignant floor of the mouth neoplasm","type":"exact"},{"name":"malignant floor of the mouth tumor","type":"exact"},{"name":"malignant floor of the mouth tumour","type":"exact"},{"name":"malignant mouth floor neoplasm","type":"exact"},{"name":"malignant neoplasm of floor of mouth","type":"exact"},{"name":"malignant neoplasm of mouth floor","type":"exact"},{"name":"malignant neoplasm of the floor of the mouth","type":"exact"},{"name":"malignant tumor of the floor of the mouth","type":"exact"},{"name":"malignant tumour of the floor of the mouth","type":"exact"},{"name":"mouth floor cancer","type":"exact"}],"termid":"MONDO:0021320","xrefs":{"Monarch":{"xref_id":"0021320"}}}


id: MONDO:0700276
data:
  {"annotated_genes":["SJAG_00637","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86141,86142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011897"},{"annotations":[86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_04934":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3A-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700276","terms_by_termid":{"MONDO:0009910":null,"MONDO:0011897":null},"xrefs":{"Monarch":{"xref_id":"0700276"}}}


id: MOD:00677
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an hydroxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated residue","synonyms":[{"name":"HyRes","type":"exact"},{"name":"Hydroxylation (of delta C of Lysine, beta C of Tryptophan, C3 or C4 of Proline, beta C of Aspartate)","type":"exact"}],"termid":"MOD:00677"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: GO:0004418
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76341],"is_not":false,"summary":null,"term":"GO:0004418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4.","definition_xrefs":["EC:2.5.1.61","RHEA:13185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxymethylbilane synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-189406","MetaCyc:OHMETHYLBILANESYN-RXN","KEGG_REACTION:R00084"],"synonyms":[{"name":"(4-(2-carboxyethyl)-3-(carboxymethyl)pyrrol-2-yl)methyltransferase (hydrolyzing) activity","type":"related"},{"name":"(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"HMB-synthase activity","type":"related"},{"name":"porphobilinogen ammonia-lyase (polymerizing)","type":"related"},{"name":"porphobilinogen deaminase activity","type":"related"},{"name":"porphobilinogen:(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"pre-uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen I synthase activity","type":"narrow"},{"name":"uroporphyrinogen I synthetase activity","type":"narrow"},{"name":"uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen synthetase activity","type":"related"}],"termid":"GO:0004418","terms_by_termid":{"GO:0004418":null}}


id: GO:0031403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lithium ion (Li+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"lithium ion binding","synonyms":[{"name":"Li+ ion binding","type":"exact"}],"termid":"GO:0031403"}


id: GO:0051935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387","Wikipedia:Glutamate_transporter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"},{"relation_name":"is_a","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutamate reuptake","synonyms":[{"name":"L-glutamate reuptake","type":"exact"},{"name":"L-glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"L-glutamate uptake involved in synaptic transmission","type":"exact"},{"name":"glutamate import into glial cell","type":"narrow"},{"name":"glutamate import into neuron","type":"narrow"},{"name":"glutamate recycling","type":"broad"},{"name":"glutamate uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051935"}


id: GO:1901979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23449501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inward rectifier potassium channel activity","synonyms":[{"name":"regulation of Kir channel activity","type":"exact"}],"termid":"GO:1901979"}


id: PBO:0068010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 312","termid":"PBO:0068010"}


id: MONDO:0017418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic intestinal failure (CIF) is a chronic type of intestinal failure characterized by a nonfunctioning small bowel (that may be reversible or irreversal) where the body is unable to maintain energy and nutritional needs through absorption of food or nutrients via the intestinal tract (despite being metabolically stable) and which therefore necessitates long-term parenteral feeding. CIF may be the result of congenital digestive diseases (such as gastroschisis, atresia of small intestine), short bowel syndrome, intra-abdominal or pelvic cancer, or progressive and devastating gastrointestinal or systemic benign diseases (such as Crohn disease).","definition_xrefs":["Orphanet:294422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic intestinal failure","secondary_identifiers":["GARD:21178","SCTID:716665002","UMLS:C4274352","MEDGEN:909276"],"synonyms":[{"name":"CIF","type":"exact"}],"termid":"MONDO:0017418","xrefs":{"Monarch":{"xref_id":"0017418"}}}


id: PATO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during dark cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark phase","termid":"PATO:0000501"}


id: GO:0005635
data:
  {"annotated_genes":["SJAG_03448","SJAG_01083","SJAG_01584","SJAG_05740","SJAG_04394","SJAG_04480","SJAG_03508","SJAG_00962","SJAG_00680","SJAG_00521","SJAG_01460","SJAG_00093","SJAG_01410","SJAG_01242","SJAG_00946","SJAG_04319","SJAG_03715","SJAG_01014","SJAG_01013","SJAG_04429","SJAG_04645","SJAG_02424","SJAG_00968","SJAG_02655","SJAG_03989","SJAG_00790","SJAG_03693","SJAG_01358","SJAG_01293","SJAG_01789","SJAG_05243","SJAG_04191","SJAG_01422","SJAG_00762","SJAG_03729","SJAG_03299","SJAG_04464","SJAG_01722","SJAG_03525","SJAG_04411","SJAG_04558","SJAG_00471","SJAG_04187","SJAG_01981","SJAG_03850","SJAG_04489","SJAG_00054","SJAG_02248","SJAG_04578","SJAG_04284","SJAG_01143","SJAG_03300","SJAG_01131","SJAG_04841","SJAG_05196","SJAG_00298","SJAG_00205","SJAG_03227","SJAG_02274","SJAG_02094","SJAG_04472","SJAG_00753","SJAG_01834","SJAG_03182","SJAG_04783","SJAG_01263","SJAG_05303","SJAG_00840","SJAG_02998","SJAG_02210","SJAG_01534","SJAG_04366","SJAG_01581","SJAG_04148","SJAG_00586","SJAG_03103","SJAG_03837","SJAG_03662","SJAG_03795","SJAG_03321","SJAG_03892","SJAG_03491","SJAG_03959","SJAG_03449","SJAG_01227","SJAG_03986","SJAG_00641","SJAG_03592","SJAG_02815","SJAG_02980","SJAG_04888","SJAG_02885","SJAG_03803","SJAG_02661","SJAG_00416","SJAG_04010","SJAG_03281","SJAG_04721","SJAG_03783","SJAG_02214","SJAG_01745","SJAG_01695","SJAG_02757","SJAG_02520","SJAG_03125","SJAG_00375","SJAG_01538","SJAG_04884","SJAG_00594","SJAG_01833","SJAG_00479","SJAG_01374","SJAG_02425","SJAG_01737","SJAG_01065","SJAG_04017","SJAG_02651","SJAG_00178","SJAG_04969","SJAG_00053","SJAG_00900","SJAG_05226","SJAG_03470","SJAG_02337","SJAG_01909","SJAG_03847","SJAG_02514","SJAG_05207","SJAG_03657","SJAG_03251","SJAG_03907","SJAG_00810","SJAG_04379","SJAG_03593","SJAG_03812","SJAG_03891","SJAG_03200","SJAG_01185","SJAG_00941","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69717,69914,71224,71448,72758,75656,78432,88075,88807,89035,89500,90141,90368,91327,91696,93024,93182,93367,93963,94619,95358,95731,96205,96480,97265,97692,98653,99050,99828,99829,102557,102751,103147,103379,103880,104113,104205,104329,104545,104740,104873,104902,105049,106142,106572,106945,106985,107087,107552,108119,108616,108648,108679,109143,109598,110472,113243,114989,115178,115851,116172,117057,117520,117703,118725,119186,119188,119196],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[112855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[70441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034992"},{"annotations":[87907,97947,100889,103728,114729],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180028"},{"annotations":[119129],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120321"},{"annotations":[118199,77755,70023,93805,102816,103409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005637"},{"annotations":[119244,91909,103459,90909,88956,89459,89379,66941,60464,93063,110868,76392,91477,114920,119242,96696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031965"},{"annotations":[76039,117588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"},{"annotations":[88478],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005640"},{"annotations":[76661,75701,69921,57808,87325,91043,119265,89780,74299,119605,68099,79580,96098,91893,107777,119215,78678,119480,119211,119209,103661,101964,119210,119481,103603,105758,117414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005643"},{"annotations":[76992,93954,101395,70740,76052,80011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[102997,75411,74668,93955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[70413,75027,76182],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[102998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[88950,60832,115571,94948,76053,114911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[73499,109872,72959,73966,71633,78026,80328,88960,70236,72763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[119466,73994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"},{"annotations":[96697,102818],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; 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id: MONDO:0022200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete treatment for disease (obsolete MONDO:0022200)","termid":"MONDO:0022200","xrefs":{"Monarch":{"xref_id":"0022200"}}}


id: PBO:0004489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-adrenodoxin reductase Arh1","termid":"PBO:0004489"}


id: PBO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0048152"}


id: GO:2001113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"negatively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"negative regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001113"}


id: MONDO:0013383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 3","secondary_identifiers":["MESH:C538121","MEDGEN:462324","UMLS:C3150974","OMIM:613711"],"synonyms":[{"name":"GDNF Hirschsprung disease","type":"exact"},{"name":"HSCR3","type":"related"},{"name":"Hirschsprung disease caused by mutation in GDNF","type":"exact"},{"name":"Hirschsprung disease modifier","type":"related"},{"name":"Hirschsprung disease type 3","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 3","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to Hirschsprung disease 3","type":"related"}],"termid":"MONDO:0013383","xrefs":{"Monarch":{"xref_id":"0013383"}}}


id: GO:0019230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling posture","termid":"GO:0050884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception","secondary_identifiers":["Wikipedia:Proprioception"],"termid":"GO:0019230"}


id: PBO:0116501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin-repeat related protein","termid":"PBO:0116501"}


id: FYPO:0001145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man9GlcNAc2 measured in a cell is higher than normal. Man9GlcNAc2 is any N-glycan that consists of a branched undecasaccharide consisting of nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PMID:12686557","PomBase:mah","CHEBI:59579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased Man9GlcNAc level","synonyms":[{"name":"increased Man9GlcNAc accumulation","type":"related"},{"name":"increased Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man9GlcNAc2 level","type":"exact"},{"name":"increased cellular Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001145"}


id: GO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"negatively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer larval development","termid":"GO:0061067"}


id: GO:0070754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-35 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-35 production","termid":"GO:0070753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35 production","secondary_identifiers":["GO:0070750"],"synonyms":[{"name":"regulation of IL-35 production","type":"exact"},{"name":"regulation of interleukin-35 biosynthetic process","type":"narrow"}],"termid":"GO:0070754"}


id: PBO:0016559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Rna Binding protein","termid":"PBO:0016559"}


id: PBO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 1","termid":"PBO:0047527"}


id: PBO:0029580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_temperature","termid":"PBO:0029580"}


id: MONDO:0957810
data:
  {"annotated_genes":["SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86197],"is_not":false,"summary":null,"term":"MONDO:0957810"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03995":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay, dysmorphic facies, and brain anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1847857","DOID:0060933","OMIM:620535","UMLS:C5882698"],"termid":"MONDO:0957810","terms_by_termid":{"MONDO:0957810":null},"xrefs":{"Monarch":{"xref_id":"0957810"}}}


id: MONDO:0009068
data:
  {"annotated_genes":["SJAG_01077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"A very rare inherited metabolic disorder characterized by deficiency of the enzyme cytochrome-C oxidase. It may be manifested as an isolated myopathy or a systemic disorder. Signs and symptoms include myotonia, dysfunction of the heart, kidney, and brain, and lactic acidosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"cytochrome-c oxidase deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:254905","NCIT:C98910","SCTID:67434000","UMLS:C0268237","GARD:48","MEDGEN:75662","DOID:3762","MESH:D030401","NORD:1030"],"synonyms":[{"name":"COX deficiency","type":"related"},{"name":"Complex 4 mitochondrial respiratory chain deficiency","type":"related"},{"name":"Complex IV deficiency","type":"related"},{"name":"Cox deficiency","type":"related"},{"name":"Cytochrome C Oxidase Deficiency","type":"exact"},{"name":"cytochrome C oxidase deficiency","type":"related"},{"name":"cytochrome-C oxidase deficiency","type":"exact"},{"name":"cytochrome-c oxidase deficiency disease","type":"exact"},{"name":"deficiency of mitochondrial respiratory chain complex4","type":"related"},{"name":"isolated COX deficiency","type":"exact"},{"name":"isolated cytochrome C oxidase deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex IV deficiency","type":"exact"},{"name":"mitochondrial Complex 4 deficiency","type":"related"},{"name":"mitochondrial complex IV deficiency","type":"exact"}],"termid":"MONDO:0009068","terms_by_termid":{"MONDO:0012992":null},"xrefs":{"Monarch":{"xref_id":"0009068"}}}


id: FYPO:0004022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase under conditions where arrest does not normally occur, with polar microtubules that are longer than normal.","definition_xrefs":["PomBase:mah","PMID:16079915"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long polar microtubules","termid":"FYPO:0004021"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"long polar microtubules","termid":"FYPO:0004021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic metaphase with long polar microtubules","synonyms":[{"name":"abnormal cell cycle arrest in metaphase with long polar microtubules during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with condensed chromosomes and long polar microtubules","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with elongated polar microtubules","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase with long polar microtubules during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in metaphase with long polar microtubules","type":"exact"},{"name":"abolished mitotic metaphase/anaphase transition with long polar microtubules","type":"related"}],"termid":"FYPO:0004022"}


id: PBO:0083771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential NTPase required for small ribosome subunit synthesis; mediates processing of the 20S pre-rRNA at site D in the cytoplasm but associates only transiently with 43S preribosomes via Rps14p; complex with Rps14 is conserved between humans, yeast, and arches; may be the endonuclease for site D; depletion leads to accumulation of pre-40S ribosomes in 80S-like ribosomes; human TAF9 functionally complements the lethality of the null mutation","termid":"PBO:0083771"}


id: MONDO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Dandy-Walker malformation and hydrocephalus is a malformation disorder characterized by sagittal craniosynostosis, Dandy-Walker malformation, hydrocephalus, craniofacial dysmorphism (including dolichocephaly, hypertelorism, micrognathia, positional ear deformity) and variable developmental delay. The inheritance pattern appears to be autosomal dominant.","definition_xrefs":["Orphanet:1538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","secondary_identifiers":["MESH:C563973","GARD:998","OMIM:123155","UMLS:C1838347","SCTID:720813007","MEDGEN:325006"],"synonyms":[{"name":"Braddock Jones Superneau syndrome","type":"related"},{"name":"Braddock-Jones-Superneau syndrome","type":"exact"},{"name":"Dandy-Walker malformation with sagittal craniosynostosis and hydrocephalus","type":"related"},{"name":"HDCPH1","type":"related"},{"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","type":"exact"},{"name":"hydrocephalus, autosomal dominant","type":"related"},{"name":"sagittal craniosynostosis, Dandy-Walker malformation and hydrocephalus","type":"related"}],"termid":"MONDO:0007401","xrefs":{"Monarch":{"xref_id":"0007401"}}}


id: PBO:0063762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHC2 antisense RNA 1","termid":"PBO:0063762"}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: PATO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grey","termid":"PATO:0000950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark grey","termid":"PATO:0001251"}


id: MONDO:0010258
data:
  {"annotated_genes":["SJAG_00466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86438],"is_not":false,"summary":null,"term":"MONDO:0010258"}]},"cv_name":"mondo","definition":"MEHMO syndrome is characterized by severe intellectual deficit, epilepsy, microcephaly, hypogenitalism, and obesity. Growth delay and diabetes are also present. To date, it has been described in seven boys, all of whom died within the first two years of life. The causative gene has been localized to the 21.1-22.13p region of the X chromosome and the syndrome appears to result from mitochondrial dysfunction.","definition_xrefs":["Orphanet:85282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete mitochondrial disease with epilepsy (obsolete MONDO:0016402)","termid":"MONDO:0016402"},{"relation_name":"excluded_subClassOf","term_name":"obsolete mitochondrial disease with peripheral neuropathy (obsolete MONDO:0016403)","termid":"MONDO:0016403"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00466":null},"genotype_count":0,"is_obsolete":false,"name":"MEHMO syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:722037004","OMIM:300987","GARD:9178","icd11.foundation:500681653","OMIM:300148","MESH:C537451","MEDGEN:375855","DOID:0060801","UMLS:C1846278"],"synonyms":[{"name":"MEHMO","type":"exact"},{"name":"MEHMO syndrome","type":"exact"},{"name":"MEHMO syndrome, X-linked recessive","type":"exact"},{"name":"MRXS20","type":"exact"},{"name":"MRXS25","type":"exact"},{"name":"MRXSBRK","type":"exact"},{"name":"X-linked MEHMO syndrome","type":"related"},{"name":"X-linked intellectual disability-epileptic seizures-hypogenitalism-microcephaly-obesity syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 20","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 25","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borck type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borck type; MRXSBRK","type":"exact"},{"name":"intellectual disability, epileptic seizures, hypogonadism and hypogenitalism, microcephaly, and obesity","type":"exact"},{"name":"mental retardation, X-linked, syndromic 20","type":"related"},{"name":"mental retardation, X-linked, syndromic 25","type":"related"},{"name":"mental retardation, X-linked, syndromic, Borck type","type":"exact"},{"name":"mental retardation, epileptic seizures, hypogonadism and hypogenitalism, microcephaly, and obesity","type":"exact"},{"name":"syndromic X-linked intellectual disability 20","type":"exact"},{"name":"syndromic X-linked intellectual disability 25","type":"exact"},{"name":"syndromic X-linked mental retardation 20","type":"exact"},{"name":"syndromic X-linked mental retardation 25","type":"exact"}],"termid":"MONDO:0010258","terms_by_termid":{"MONDO:0010258":null},"xrefs":{"Monarch":{"xref_id":"0010258"}}}


id: MONDO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachyolmia is a rare, clinically and genetically heterogeneous group of bone disorders characterized by short trunk, mild short stature, scoliosis and generalized platyspondyly without significant abnormalities in the long bones.","definition_xrefs":["Orphanet:1293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia","secondary_identifiers":["ICD9:756.19","MESH:C537098","icd11.foundation:1255949169","SCTID:254088006","GARD:10903","MEDGEN:96584","UMLS:C0432228","DOID:0050690"],"synonyms":[{"name":"brachyrachia","type":"exact"}],"termid":"MONDO:0015262","xrefs":{"Monarch":{"xref_id":"0015262"}}}


id: GO:0097257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + NADP+ = 12-oxo-leukotriene B4 + NADPH + H+.","definition_xrefs":["PMID:8394361","KEGG_REACTION:R03864","PMID:9461497","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"leukotriene B4 12-hydroxy dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161567","RHEA:50608"],"synonyms":[{"name":"leukotriene B4 12-hydroxydehydrogenase activity","type":"exact"}],"termid":"GO:0097257"}


id: GO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-tryptophan catabolic process","secondary_identifiers":["Reactome:R-HSA-71240"],"synonyms":[{"name":"tryptophan breakdown","type":"exact"},{"name":"tryptophan catabolic process","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"narrow"},{"name":"tryptophan catabolism","type":"exact"},{"name":"tryptophan catabolism, using tryptophanase","type":"narrow"},{"name":"tryptophan degradation","type":"exact"}],"termid":"GO:0006569"}


id: PATO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001118 momentum value (obsolete PATO:0001118)","termid":"PATO:0001118"}


id: MONDO:0025389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cattle caused by bacteria of the genus brucella leading to abortion in late pregnancy. brucella abortus is the primary infective agent.","definition_xrefs":["MESH:D002007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brucellosis, bovine","synonyms":[{"name":"Bangs disease","type":"related"},{"name":"Brucelloses, bovine","type":"related"},{"name":"bang disease","type":"related"},{"name":"bang's disease","type":"related"},{"name":"bovine Brucelloses","type":"related"},{"name":"bovine brucellosis","type":"related"},{"name":"disease, bang","type":"related"},{"name":"disease, bang's","type":"related"}],"termid":"MONDO:0025389","xrefs":{"Monarch":{"xref_id":"0025389"}}}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: PBO:0077100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 1","termid":"PBO:0077100"}


id: GO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus.","definition_xrefs":["GOC:vp","GOC:add","PMID:20303873","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"NLRP3 inflammasome complex","synonyms":[{"name":"NALP3 inflammasome complex","type":"exact"}],"termid":"GO:0072559"}


id: GO:0070066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains cellubrevin (VAMP3), VAMP4, endobrevin (VAMP8), and syntaxin 6 (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cellubrevin-VAMP4-endobrevin-syntaxin-6 complex","synonyms":[{"name":"SNARE complex (Vamp3, Vamp4, Vam8, Stx6)","type":"narrow"},{"name":"Vamp3-Vamp4-Vam8-Stx6 complex","type":"narrow"}],"termid":"GO:0070066"}


id: PBO:0041523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 78","termid":"PBO:0041523"}


id: GO:0000146
data:
  {"annotated_genes":["SJAG_00938","SJAG_02431","SJAG_03703","SJAG_04001","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69840,70947,74232,76583,79517],"is_not":false,"summary":null,"term":"GO:0000146"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.","definition_xrefs":["PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003774","GO:0003674"],"is_obsolete":false,"name":"microfilament motor activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9023171","GO:0030898","Reactome:R-HSA-2316352","Reactome:R-HSA-432237","EC:5.6.1.8"],"synonyms":[{"name":"actin filament motor activity","type":"exact"},{"name":"actin-activated ATPase activity","type":"exact"},{"name":"actin-dependent ATPase activity","type":"exact"},{"name":"actin-filament motor activity","type":"exact"},{"name":"muscle motor activity","type":"narrow"},{"name":"myosin ATPase activity","type":"related"}],"termid":"GO:0000146","terms_by_termid":{"GO:0000146":null}}


id: PBO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich coiled-coil 1","termid":"PBO:0052615"}


id: GO:0007621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances.","definition_xrefs":["GOC:bf","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity","synonyms":[{"name":"down regulation of female receptivity","type":"exact"},{"name":"down-regulation of female receptivity","type":"exact"},{"name":"downregulation of female receptivity","type":"exact"},{"name":"inhibition of female receptivity","type":"narrow"}],"termid":"GO:0007621"}


id: PBO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_ubiquitination","termid":"PBO:0030934"}


id: MOD:01871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: PBO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead associated phosphopeptide binding domain 1","termid":"PBO:0047596"}


id: MONDO:1012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, domestic cat","secondary_identifiers":["OMIA:000113-9685"],"termid":"MONDO:1012028","xrefs":{"Monarch":{"xref_id":"1012028"}}}


id: PBO:0079814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UHRF1BP1L divergent transcript","termid":"PBO:0079814"}


id: GO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.17-RXN","RHEA:19169"],"synonyms":[{"name":"L-hydroxyaminoacid dehydratase activity","type":"broad"},{"name":"L-serine ammonia-lyase (pyruvate-forming) activity","type":"related"},{"name":"L-serine deaminase activity","type":"exact"},{"name":"L-serine dehydratase activity","type":"broad"},{"name":"L-serine dehydration activity","type":"related"},{"name":"L-serine hydro-lyase (deaminating) activity","type":"exact"},{"name":"serine deaminase activity","type":"broad"}],"termid":"GO:0003941"}


id: GO:0035182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron opaque backbone of the insect ovarian ring canal that is a part of or adjacent to the plasma membrane. The outer rim is established as the cleavage furrow is arrested, and contains F-actin, anillin, glycoproteins and at least one a protein with a high content of phosphorylated tyrosine residues.","definition_xrefs":["PMID:7925006","PMID:12435357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"female germline ring canal","termid":"GO:0035324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"female germline ring canal outer rim","synonyms":[{"name":"germline ring canal outer rim","type":"broad"},{"name":"nurse cell ring canal outer rim","type":"narrow"},{"name":"ovarian ring canal outer rim","type":"narrow"}],"termid":"GO:0035182"}


id: GO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining a protein in an unfolded, soluble state.","definition_xrefs":["GOC:nc","GOC:PARL","GOC:bf","PMID:21636303","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein","termid":"GO:0036506"}


id: PBO:0085274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex30p and Pex32p; probably acts at a step downstream of steps mediated by Pex28p and Pex29p; PEX31 has a paralog, PEX30, that arose from the whole genome duplication","termid":"PBO:0085274"}


id: PBO:0087720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; conserved from yeast to human; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for transcriptional activation and has a role in basal transcription; protein abundance increases in response to DNA replication stress","termid":"PBO:0087720"}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: GO:2001243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of intrinsic apoptosis","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001243"}


id: MONDO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade I, slowly growing meningioma. Only a minority of tumors recur following complete resection.","definition_xrefs":["NCIT:C4055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"benign neoplasm of meninges","termid":"MONDO:0021527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign meningioma","secondary_identifiers":["DOID:4587","MEDGEN:129095","UMLS:C0281784","SCTID:724171006"],"synonyms":[{"name":"benign meningioma (WHO grade I)","type":"exact"},{"name":"meningioma (disease), benign","type":"exact"},{"name":"meningioma, benign","type":"exact"}],"termid":"MONDO:0003054","xrefs":{"Monarch":{"xref_id":"0003054"}}}


id: GO:0086033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the alpha subunit of a coupled G-protein binding to GTP. This results in the separation of the beta-gamma complex from the alpha subunit. Both the alpha subunit, and the beta-gamma complex can continue to signal to bring about membrane hyperpolarization and a reduction in heart rate.","definition_xrefs":["Wikipedia:G_protein-gated_ion_channel","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","termid":"GO:0086093"},{"relation_name":"part_of","term_name":"negative regulation of heart rate by acetylcholine","termid":"GO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"M2 receptor signalling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate","type":"exact"}],"termid":"GO:0086033"}


id: PBO:0078373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase","termid":"PBO:0078373"}


id: GO:0160175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a somatic muscle attaches to the chitin-based cuticle. In insects, this may occur via a specialized epithelial cell adherence to the chitinous extracellular matrix and to muscle cells through their basement membrane.","definition_xrefs":["PMID:35675426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle attachment to chitin-based cuticle","termid":"GO:0160175"}


id: MONDO:0019611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoma of the anterior lobe of the pituitary gland that produces thyrotropin. It is usually associated with goiter and hyperthyroidism.","definition_xrefs":["NCIT:C8011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TSH producing pituitary tumor","termid":"MONDO:0003837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSH-secreting pituitary adenoma","secondary_identifiers":["MEDGEN:87550","NANDO:1200377","Orphanet:91347","UMLS:C0346303","GARD:19157","ICD10CM:D35.2","icd11.foundation:125504731"],"synonyms":[{"name":"TSH producing adenoma of pituitary","type":"exact"},{"name":"TSH producing adenoma of pituitary gland","type":"exact"},{"name":"TSH producing adenoma of the pituitary","type":"exact"},{"name":"TSH producing adenoma of the pituitary gland","type":"exact"},{"name":"TSH producing pituitary adenoma","type":"exact"},{"name":"TSH producing pituitary gland adenoma","type":"exact"},{"name":"TSH secreting adenoma of pituitary","type":"exact"},{"name":"TSH secreting adenoma of pituitary gland","type":"exact"},{"name":"TSH secreting adenoma of the pituitary","type":"exact"},{"name":"TSH secreting adenoma of the pituitary gland","type":"exact"},{"name":"TSH secreting pituitary adenoma","type":"exact"},{"name":"TSH secreting pituitary gland adenoma","type":"exact"},{"name":"TSH-oma","type":"exact"},{"name":"TSH-producing adenoma","type":"exact"},{"name":"TSH-producing pituitary gland adenoma","type":"exact"},{"name":"TSHoma","type":"exact"},{"name":"pituitary thyrotrophic adenoma","type":"exact"},{"name":"thyroid stimulating hormone producing adenoma of pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing adenoma of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing adenoma of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing adenoma of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary adenoma","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary gland adenoma","type":"exact"},{"name":"thyroid stimulating hormone secreting adenoma of pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting adenoma of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting adenoma of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting adenoma of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary adenoma","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary gland adenoma","type":"exact"},{"name":"thyroid stimulating hormone-producing adenoma","type":"exact"},{"name":"thyroid stimulating hormone-secreting pituitary adenoma","type":"exact"},{"name":"thyrotrope adenoma","type":"exact"},{"name":"thyrotroph adenoma","type":"exact"},{"name":"thyrotrophic adenoma","type":"exact"},{"name":"thyrotropin producing pituitary gland adenoma","type":"exact"},{"name":"thyrotropinoma","type":"exact"}],"termid":"MONDO:0019611","xrefs":{"Monarch":{"xref_id":"0019611"}}}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: PBO:0028949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip","termid":"PBO:0028949"}


id: PBO:0017717
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pol1 promoter region contains 5 near matches to the MluI cell cycle box (MCB) consensus sequence","termid":"PBO:0017717"}


id: MONDO:0020263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia with oculomotor anomaly (obsolete MONDO:0020263)","secondary_identifiers":["Orphanet:98693"],"termid":"MONDO:0020263","xrefs":{"Monarch":{"xref_id":"0020263"}}}


id: GO:0020031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense ring at the most anterior position of the apical complex, from which the conoid fibers originate; formed during an invasive life cycle stage of an apicomplexan parasite.","definition_xrefs":["PMID:16518471","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar ring of apical complex","synonyms":[{"name":"anterior polar ring of apical complex","type":"exact"},{"name":"upper polar ring of apical complex","type":"exact"}],"termid":"GO:0020031"}


