# terms

id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["GARD:20975","UMLS:C0027806","icd11.foundation:172158971","MEDGEN:14343","Orphanet:268865"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: PR:O60168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcl3 gene.","definition_xrefs":["UniProtKB:O60168","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C19F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.04c","synonyms":[{"name":"Spom972h-lcl3","type":"exact"}],"termid":"PR:O60168"}


id: MONDO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal condition characterized by an acute autoimmune reaction of the eye. It is caused by hypersensitivity of the eye to the protein of the crystalline lens and commonly follows trauma to the crystalline lens or cataract surgery. Associated symptoms include swelling and inflammation of the eye, severe pain, and blurred vision. The substance of the lens is invaded by polymorphonuclear cells and mononuclear phagocytes. Accurate diagnosis must differentiate between this condition and infectious endophthalmitis. Therapy is supportive and commonly includes the administration of corticosteroids and atropine. Refractory cases may require surgical removal of the lens.","direct_ancestors":[{"relation_name":"is_a","term_name":"phacogenic glaucoma","termid":"MONDO:0001554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"phacolytic glaucoma","secondary_identifiers":["icd11.foundation:1566213590","SCTID:32893002","ICD9:365.51","DOID:12570","MEDGEN:508901","UMLS:C0152137"],"termid":"MONDO:0001553","xrefs":{"Monarch":{"xref_id":"0001553"}}}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: PBO:0055051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2466","termid":"PBO:0055051"}


id: PBO:0004314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (predicted)","termid":"PBO:0004314"}


id: MONDO:0021023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complete androgen insensitivity syndrome (CAIS) is a form of androgen insensitivity syndrome (AIS), a disorder of sex development (DSD), characterized by the presence of female external genitalia in a 46,XY individual with normal testis development but undescended testes and unresponsiveness to age-appropriate levels of androgens.","definition_xrefs":["Orphanet:99429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome","termid":"MONDO:0019154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete androgen insensitivity syndrome","secondary_identifiers":["GARD:10597","MEDGEN:183188","DOID:0080775","NCIT:C120191","UMLS:C0936016","SCTID:368851000119102","ICD10CM:E34.51"],"synonyms":[{"name":"CAIS","type":"exact"},{"name":"androgen insensitivity syndrome, complete","type":"related"},{"name":"complete androgen resistance syndrome","type":"exact"}],"termid":"MONDO:0021023","xrefs":{"Monarch":{"xref_id":"0021023"}}}


id: MONDO:0003643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma characterized by the presence of hylanized vascular channels and is often associated with the presence of calcifications, fibrosis, and hemorrhage.","definition_xrefs":["NCIT:C27777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"giant hemangioma","secondary_identifiers":["MEDGEN:272670","DOID:5774","UMLS:C1333817"],"synonyms":[{"name":"giant hemangioma","type":"exact"}],"termid":"MONDO:0003643","xrefs":{"Monarch":{"xref_id":"0003643"}}}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: PR:P40379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rep1 gene.","definition_xrefs":["UniProtKB:P40379","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rec16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.06","synonyms":[{"name":"Spom972h-rep1","type":"exact"},{"name":"zinc finger protein rep1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40379"}


id: PBO:0034226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_upstream_of_sequence_of","termid":"PBO:0034226"}


id: PATO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic","termid":"PATO:0000692"}


id: PR:Q7Z991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf16 gene.","definition_xrefs":["UniProtKB:Q7Z991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C20G4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.01","synonyms":[{"name":"Spom972h-caf16","type":"exact"}],"termid":"PR:Q7Z991"}


id: PBO:0084646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus end-tracking protein; forms a complex with Kar9p that makes up the cortical microtubule capture site and delays the exit from mitosis when the spindle is oriented abnormally; homolog of human end binding protein 1 (EB1)","termid":"PBO:0084646"}


id: PBO:0028026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_meiosis_II","termid":"PBO:0028026"}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: PBO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPVL antisense RNA 1","termid":"PBO:0043843"}


id: PATO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mass which is lower than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mass","secondary_identifiers":["PATO:0000579"],"synonyms":[{"name":"low mass","type":"exact"},{"name":"small mass","type":"exact"}],"termid":"PATO:0001562"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: GO:0099540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"},{"relation_name":"is_a","term_name":"synaptic signaling via neuropeptide","termid":"GO:0099538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}


id: GO:0072332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:0072332"}


id: GO:0016635
data:
  {"annotated_genes":["SJAG_02876","SJAG_00197","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[60108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070819"},{"annotations":[75950,66227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.","definition_xrefs":["EC:1.3.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00260":null,"SJAG_01671":null,"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016635","terms_by_termid":{"GO:0008177":null,"GO:0070819":null,"GO:0106430":null}}


id: GO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephros are generated and organized. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros morphogenesis","synonyms":[{"name":"pronephric kidney morphogenesis","type":"exact"}],"termid":"GO:0072114"}


id: PBO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 19 subfamily A member 1","termid":"PBO:0044476"}


id: PBO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase Gln1","termid":"PBO:0001060"}


id: PBO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt3p, can instead interact with Pmt2p in some conditions; target for new antifungals","termid":"PBO:0086082"}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: GO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeletal joints over time, from formation to mature structure.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint development","termid":"GO:0072498"}


id: MONDO:0015588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of autoimmune conditions characterized by inflammation of the limbic system and other parts of the brain.The cardinal sign of limbic encephalitis is a severe impairment of short-term memory; however,symptoms may also include confusion, psychiatric symptoms, and seizures.The symptomstypically develop over a few weeks or months, but they may evolve over a few days. Limbic encephalitis is often associated with an underlying neoplasm (paraneoplastic limbic encephalitis); however some cases never have a neoplasm identified (non-paraneoplastic limbic encephalitis). Delayed diagnosis is common, but improvements are being made to assist in early detection. Various tests including imaging studies (MRI, PET) laboratory tests (CSF analysis), and tests that measure the electrical activity of the brain (EEG) may be utilized to confirm a diagnosis. Treatment includes removal of the neoplasm (if identified) and immunotherapy.","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic encephalitis","secondary_identifiers":["ICD9:323.9","MESH:D020363","UMLS:C0338430","Orphanet:163892","GARD:8742","DOID:0080741","MEDGEN:137895","SCTID:230192003"],"termid":"MONDO:0015588","xrefs":{"Monarch":{"xref_id":"0015588"}}}


id: PBO:0063462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor D","termid":"PBO:0063462"}


id: PBO:0017614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2 (predicted)","termid":"PBO:0017614"}


id: PATO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual whose sex is unknown.","definition_xrefs":["MGED:MGED"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001336 unknown sex (obsolete PATO:0001336)","termid":"PATO:0001336"}


id: PATO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised ventrally","termid":"PATO:0001920"}


id: MONDO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperphenylalaninemia, BH4-deficient (obsolete MONDO:0000040)","termid":"MONDO:0000040","xrefs":{"Monarch":{"xref_id":"0000040"}}}


id: GO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-lysine = L-glutamate + allysine.","definition_xrefs":["RHEA:21200","EC:2.6.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"L-lysine 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00457","MetaCyc:L-LYSINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine aminotransferase activity","type":"related"},{"name":"L-lysine transaminase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate 6-aminotransferase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-lysine:2-oxoglutarate 6-aminotransferase activity","type":"related"},{"name":"lysine 6-aminotransferase activity","type":"exact"},{"name":"lysine epsilon-aminotransferase activity","type":"related"},{"name":"lysine epsilon-transaminase activity","type":"related"},{"name":"lysine:2-ketoglutarate 6-aminotransferase activity","type":"related"}],"termid":"GO:0045484"}


id: PBO:0091778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa2","termid":"PBO:0091778"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119489],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"negatively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of megakaryocyte differentiation","synonyms":[{"name":"down regulation of megakaryocyte differentiation","type":"exact"},{"name":"down-regulation of megakaryocyte differentiation","type":"exact"},{"name":"downregulation of megakaryocyte differentiation","type":"exact"},{"name":"inhibition of megakaryocyte differentiation","type":"narrow"}],"termid":"GO:0045653"}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: GO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal bud.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud tip","termid":"GO:0005934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cellular bud tip polarisome","termid":"GO:0031561"}


id: MONDO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute lymphoblastic leukemia of T-cell origin. It comprises about 15% of childhood cases and 25% of adult cases. It is more common in males than females. (WHO, 2001)","definition_xrefs":["NCIT:C3183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"T-cell leukemia","termid":"MONDO:0005525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell acute lymphoblastic leukemia","secondary_identifiers":["ICDO:9837/3","CSP:2004-1600","EFO:0000209","DOID:5603","MEDGEN:368378","NANDO:2200003","HGNC:5056","SCTID:110007008","SCTID:277575008","CSP:2004-1803","UMLS:C1961099"],"synonyms":[{"name":"T acute lymphoblastic leukaemia","type":"exact"},{"name":"T acute lymphoblastic leukemia","type":"exact"},{"name":"T-ALL","type":"exact"},{"name":"T-cell ALL","type":"exact"},{"name":"T-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"T-cell acute lymphoblastic leukemia","type":"exact"},{"name":"T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"T-cell acute lymphocytic leukemia","type":"exact"},{"name":"T-cell type acute leukaemia","type":"exact"},{"name":"T-cell type acute leukemia","type":"exact"},{"name":"acute T cell leukaemia","type":"broad"},{"name":"acute T cell leukemia","type":"exact"},{"name":"acute T cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T cell lymphoblastic leukemia","type":"exact"},{"name":"acute T cell lymphocytic leukaemia","type":"exact"},{"name":"acute T cell lymphocytic leukemia","type":"exact"},{"name":"acute T-cell leukaemia","type":"exact"},{"name":"acute T-cell leukemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukaemia","type":"exact"},{"name":"acute T-cell lymphoblastic leukemia","type":"exact"},{"name":"acute T-cell lymphocytic leukaemia","type":"exact"},{"name":"acute T-cell lymphocytic leukemia","type":"exact"},{"name":"precursor T lymphoblastic leukaemia","type":"exact"},{"name":"precursor T lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia","type":"exact"},{"name":"precursor T-lymphoblastic leukaemia (T-cell ALL)","type":"exact"},{"name":"precursor T-lymphoblastic leukemia","type":"exact"},{"name":"precursor T-lymphoblastic leukemia (T-cell ALL)","type":"exact"}],"termid":"MONDO:0004963","xrefs":{"Monarch":{"xref_id":"0004963"}}}


id: PBO:0087460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric NC2 transcription regulator complex; complex binds to TBP and can repress transcription by preventing preinitiation complex assembly or stimulate activated transcription; homologous to human NC2alpha; complex also includes Ncb2p; bur6 ncb2 double mutation is functionally complemented by coexpression of human DRAP1 and DR1, although the single bur6 mutation is not complemented by its ortholog DRAP1","termid":"PBO:0087460"}


id: GO:0061837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a neuropeptide precursor. Processing leads to the attainment of the full functional capacity of the neuropeptide.","definition_xrefs":["PMID:17564681","PMID:12657671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"neuropeptide processing","termid":"GO:0061837"}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: FYPO:0005836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip does not occur. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abolished protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport along microtubule to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005836"}


id: SO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is incomplete.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragmentary","synonyms":[{"name":"fragment","type":"exact"}],"termid":"SO:0000731"}


id: PR:O94315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxidoreductase YdbC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C215.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.11c","secondary_identifiers":["UniProtKB:O94315"],"synonyms":[{"name":"Spom972h-ydbC","type":"exact"}],"termid":"PR:O94315"}


id: PR:Q9P7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada2 gene.","definition_xrefs":["UniProtKB:Q9P7J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adapter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.08c","synonyms":[{"name":"Spom972h-ada2","type":"exact"}],"termid":"PR:Q9P7J7"}


id: PBO:0078805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 22-1","termid":"PBO:0078805"}


id: PBO:0066296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member X, pseudogene","termid":"PBO:0066296"}


id: MONDO:0010467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xq27.3q28 duplication syndrome is a recently described syndrome characterized by short stature, hypogonadism, developmental delay and facial dysmorphism.","definition_xrefs":["Orphanet:261483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq27.3q28 duplication syndrome","secondary_identifiers":["UMLS:C3275521","MEDGEN:477152","GARD:17247","OMIM:300869"],"synonyms":[{"name":"Xq27.3-q28 microduplication syndrome","type":"exact"},{"name":"chromosome Xq27.3-q28 DUPLICATION syndrome","type":"related"},{"name":"chromosome xq27.3-q28 duplication syndrome, X-linked recessive","type":"exact"},{"name":"dup(X)(q27.3q28)","type":"exact"},{"name":"trisomy Xq27.3-q28","type":"exact"},{"name":"trisomy Xq27.3q28","type":"exact"}],"termid":"MONDO:0010467","xrefs":{"Monarch":{"xref_id":"0010467"}}}


id: PBO:0046967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member D","termid":"PBO:0046967"}


id: MONDO:0022462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by bilateral anophthalmia, esophageal atresia, and cryptorchidism. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:1352427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anophthalmia esophageal atresia cryptorchidism","termid":"MONDO:0022462","xrefs":{"Monarch":{"xref_id":"0022462"}}}


id: PBO:0048037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicle stimulating hormone receptor","termid":"PBO:0048037"}


id: GO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + inorganic triphosphate = diphosphate + phosphate.","definition_xrefs":["RHEA:14157","EC:3.6.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inorganic triphosphate phosphatase activity","secondary_identifiers":["MetaCyc:TRIPHOSPHATASE-RXN","KEGG_REACTION:R00138"],"synonyms":[{"name":"inorganic triphosphatase activity","type":"related"},{"name":"triphosphatase activity","type":"broad"},{"name":"triphosphate phosphohydrolase activity","type":"related"},{"name":"tripolyphosphatase activity","type":"exact"}],"termid":"GO:0050355"}


id: GO:0102285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-11-oxopentalenate + O2 + NADPH + H+ = pentalenolactone D + H2O + NADP.","definition_xrefs":["GOC:pz","RHEA:34635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1-deoxy-11-oxopentalenate oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12654","EC:1.14.13.170"],"termid":"GO:0102285"}


id: MONDO:0020937
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87096,87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[87122,87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"contractures, pterygia, and variable skeletal fusions syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:178110"],"termid":"MONDO:0020937","terms_by_termid":{"MONDO:0008338":null,"MONDO:0020746":null},"xrefs":{"Monarch":{"xref_id":"0020937"}}}


id: GO:1905631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:11377826","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"},{"relation_name":"is_a","term_name":"response to glyceraldehyde","termid":"GO:1905630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glyceraldehyde","termid":"GO:1905631"}


id: MONDO:0014696
data:
  {"annotated_genes":["SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84976],"is_not":false,"summary":null,"term":"MONDO:0014696"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"COFS syndrome","termid":"MONDO:0008926"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"cerebrooculofacioskeletal syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1851443","DOID:0080913","GARD:16140","MESH:C565035","MEDGEN:342008","OMIM:616570"],"synonyms":[{"name":"COFS3","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome 3","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome type 3","type":"exact"}],"termid":"MONDO:0014696","terms_by_termid":{"MONDO:0014696":null},"xrefs":{"Monarch":{"xref_id":"0014696"}}}


id: PBO:0091573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta6","termid":"PBO:0091573"}


id: MONDO:1010464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, chicken","secondary_identifiers":["OMIA:000779-9031"],"termid":"MONDO:1010464","xrefs":{"Monarch":{"xref_id":"1010464"}}}


id: GO:0005275
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amines, including polyamines, from one side of a membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"amine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005279"],"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"broad"},{"name":"amine/polyamine transmembrane transporter activity","type":"exact"},{"name":"amino acid-polyamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0005275","terms_by_termid":{"GO:0015200":null}}


id: GO:2000406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte migration","termid":"GO:2000403"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"positively_regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell migration","synonyms":[{"name":"positive regulation of T lymphocyte migration","type":"exact"},{"name":"positive regulation of T-cell migration","type":"exact"},{"name":"positive regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000406"}


id: PBO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 1","termid":"PBO:0061427"}


id: GO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host environment (obsolete GO:0052117)","synonyms":[{"name":"aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052117"}


id: GO:0034753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor (AhR) complex found in the nucleus; ; consists of ligand-bound AhR and the aryl hydrocarbon receptor nuclear translocator (ARNT).","definition_xrefs":["PMID:7598497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear aryl hydrocarbon receptor complex","synonyms":[{"name":"6S-nuclear aryl hydrocarbon (Ah) receptor ligand-activated complex","type":"related"},{"name":"nuclear AHRC","type":"exact"},{"name":"nuclear AhR complex","type":"exact"}],"termid":"GO:0034753"}


id: GO:1902331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA strand elongation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand elongation involved in bacterial-type DNA replication (obsolete GO:1902331)","termid":"GO:1902331"}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: PBO:0091984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote-like Wtf21","termid":"PBO:0091984"}


id: PBO:0038977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylarginine hydrolase","termid":"PBO:0038977"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: GO:0018559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2-(dihydroxy-4'-chorophenyl)-2-(4-chlorophenyl)ethene + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate.","definition_xrefs":["UM-BBD_reactionID:r0442"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethene 1,2-dioxygenase activity (obsolete GO:0018559)","synonyms":[{"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethylene 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018559"}


id: MONDO:0014023
data:
  {"annotated_genes":["SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85253],"is_not":false,"summary":null,"term":"MONDO:0014023"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005336","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with intellectual disability and severe epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080571","OMIM:615042","MEDGEN:1682844","Orphanet:329178","UMLS:C5190603","GARD:12416"],"synonyms":[{"name":"CDG Iu","type":"related"},{"name":"CDG syndrome type Iu","type":"exact"},{"name":"CDG-Iu","type":"exact"},{"name":"CDG1U","type":"exact"},{"name":"CMD with intellectual disability and severe epilepsy","type":"exact"},{"name":"DPM2-CDG","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Iu","type":"exact"},{"name":"congenital disorder of glycosylation type 1u","type":"exact"},{"name":"congenital disorder of glycosylation type Iu","type":"exact"},{"name":"congenital disorder of glycosylation, type Iu","type":"related"}],"termid":"MONDO:0014023","terms_by_termid":{"MONDO:0014023":null},"xrefs":{"Monarch":{"xref_id":"0014023"}}}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["Orphanet:370938","GARD:12059","UMLS:C1836824","DOID:0060470","SCTID:722762005","MEDGEN:323005","Orphanet:370933","Orphanet:171714","OMIM:609056"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: MONDO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An exceedingly rare, autosomal recessive immune disease characterized by thumb aplasia, short stature with skeletal abnormalities, and combined immunodeficiency described in three sibships from two possibly related families. The skeletal abnormalities included unfused olecranon and the immunodeficiency manifested with severe chickenpox and chronic candidiasis. No new cases have been reported since 1978.","definition_xrefs":["Orphanet:2951"],"gene_count":0,"genotype_count":0,"name":"obsolete absent thumb-short stature-immunodeficiency syndrome (obsolete MONDO:0010123)","secondary_identifiers":["OMIM:274190","MESH:C564770"],"synonyms":[{"name":"thumb agenesis, short stature, and immunodeficiency","type":"related"}],"termid":"MONDO:0010123","xrefs":{"Monarch":{"xref_id":"0010123"}}}


id: MONDO:0011813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A3","secondary_identifiers":["MESH:C564590","UMLS:C1846452","MEDGEN:337585","OMIM:607324","GARD:18174"],"synonyms":[{"name":"PAPA3","type":"related"},{"name":"Papa3","type":"related"},{"name":"polydactyly, postaxial, type A3","type":"exact"},{"name":"postaxial polydactyly, type A3","type":"related"}],"termid":"MONDO:0011813","xrefs":{"Monarch":{"xref_id":"0011813"}}}


id: GO:0140325
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94379],"is_not":false,"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140325","terms_by_termid":{"GO:0140325":null}}


id: GO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a misfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:15226511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to misfolded protein","termid":"GO:0051788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of misfolded protein","termid":"GO:0002236"}


id: MONDO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal pathological resorption of tooth","secondary_identifiers":["SCTID:52994003","DOID:13239","ICD9:521.41","MEDGEN:540237","UMLS:C0266880"],"synonyms":[{"name":"internal granuloma of pulp","type":"related"},{"name":"internal pathologic resorption","type":"exact"},{"name":"internal pathological resorption","type":"related"},{"name":"internal resorption of crown of tooth","type":"related"},{"name":"internal resorption of tooth","type":"exact"},{"name":"pathological tooth resorption - internal","type":"related"},{"name":"pink spot lesion of tooth","type":"related"},{"name":"pink tooth of mummery","type":"related"}],"termid":"MONDO:0001668","xrefs":{"Monarch":{"xref_id":"0001668"}}}


id: PBO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 4","termid":"PBO:0046023"}


id: MONDO:0020141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with dementia (obsolete MONDO:0020141)","secondary_identifiers":["Orphanet:98542"],"termid":"MONDO:0020141","xrefs":{"Monarch":{"xref_id":"0020141"}}}


id: GO:1905171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["PMID:23303671","GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to phagocytic vesicle","termid":"GO:1905169"},{"relation_name":"positively_regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"activation of protein localisation in phagocytic vesicle","type":"narrow"},{"name":"activation of protein localisation to phagocytic vesicle","type":"narrow"},{"name":"activation of protein localisation to phagosome","type":"narrow"},{"name":"activation of protein localization in phagocytic vesicle","type":"narrow"},{"name":"activation of protein localization to phagocytic vesicle","type":"narrow"},{"name":"activation of protein recruitment to phagosome","type":"narrow"},{"name":"positive regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein localisation to phagosome","type":"exact"},{"name":"positive regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein recruitment to phagosome","type":"exact"},{"name":"up regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"up regulation of protein localisation to phagosome","type":"exact"},{"name":"up regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"up regulation of protein recruitment to phagosome","type":"exact"},{"name":"up-regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein localisation to phagosome","type":"exact"},{"name":"up-regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein recruitment to phagosome","type":"exact"},{"name":"upregulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"upregulation of protein localisation to phagosome","type":"exact"},{"name":"upregulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"upregulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905171"}


id: GO:1905696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of polysome binding.","definition_xrefs":["PMID:18426977","GOC:TermGenie","GO_REF:0000059","GOC:bc","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of polysome binding (obsolete GO:1905696)","synonyms":[{"name":"regulation of polyribosome binding","type":"exact"}],"termid":"GO:1905696"}


id: PBO:0049754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma associated transcript 5","termid":"PBO:0049754"}


id: MOD:02055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-serine residue","synonyms":[{"name":"XlnkSer","type":"exact"}],"termid":"MOD:02055"}


id: MONDO:0006014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the vulva and vagina with a fungus of the genus CANDIDA. It is a disease associated with HIV infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous candidiasis","termid":"MONDO:0000879"},{"relation_name":"is_a","term_name":"vulvovaginitis","termid":"MONDO:0007019"},{"relation_name":"is_a","term_name":"infective vaginitis","termid":"MONDO:0023557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvovaginal candidiasis","secondary_identifiers":["SCTID:72605008","ICD9:112.1","MESH:D002181","EFO:0007543","ICD10CM:B37.3","UMLS:C0700345","NCIT:C2914","MEDGEN:195979","DOID:2272"],"synonyms":[{"name":"candidal vulvovaginitis","type":"exact"},{"name":"candidal: [vulvovaginitis NOS] or [cervix]","type":"exact"},{"name":"candidal: cervix","type":"exact"},{"name":"candidiasis of vulva and vagina","type":"exact"},{"name":"monilial vulvovaginitis","type":"exact"},{"name":"vaginal candidiasis","type":"exact"},{"name":"vulvovaginal candidiasis","type":"exact"}],"termid":"MONDO:0006014","xrefs":{"Monarch":{"xref_id":"0006014"}}}


id: MONDO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calcification of the aortic valve","definition_xrefs":["EFO:0005239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve disorder","termid":"MONDO:0003803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve calcification","secondary_identifiers":["MEDGEN:140899","SCTID:250978003","HP:0004380","UMLS:C0428791"],"synonyms":[{"name":"aortic valve calcification","type":"exact"},{"name":"aortic valve calcification (disease)","type":"exact"}],"termid":"MONDO:0005463","xrefs":{"Monarch":{"xref_id":"0005463"}}}


id: PBO:0003719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase homolog","termid":"PBO:0003719"}


id: PBO:0042085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 152","termid":"PBO:0042085"}


id: PBO:0044348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 33","termid":"PBO:0044348"}


id: PBO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport_during_meiosis","termid":"PBO:0034576"}


id: MONDO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune process characterized by the clinical triad of ophthalmoplegia, ataxia, and areflexia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Miller Fisher syndrome","secondary_identifiers":["MEDGEN:95994","MedDRA:10049567","MESH:D019846","NCIT:C116958","UMLS:C0393799","SCTID:1767005","GARD:3668","Orphanet:98919","EFO:0007371","DOID:12889","icd11.foundation:134795253"],"synonyms":[{"name":"Fisher syndrome","type":"exact"},{"name":"Fisher's syndrome","type":"exact"},{"name":"Guillain Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Guillain-Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Miller Fisher variant of Guillain Barre syndrome","type":"exact"},{"name":"Miller-Fisher syndrome","type":"exact"},{"name":"Miller-Fisher variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of GBS","type":"exact"},{"name":"cranial variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of Guillain-Barré syndrome","type":"exact"},{"name":"ophthalmoplegia, ataxia and areflexia syndrome","type":"exact"},{"name":"syndrome, Fisher","type":"exact"},{"name":"syndrome, Miller Fisher","type":"exact"},{"name":"syndrome, Miller-Fisher","type":"exact"}],"termid":"MONDO:0005851","xrefs":{"Monarch":{"xref_id":"0005851"}}}


id: PBO:0082223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in intracellular amino acid permease sorting, functions in heat shock element mediated gene expression, essential for growth in stress conditions; BUL2 has a paralog, BUL1, that arose from the whole genome duplication","termid":"PBO:0082223"}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: GO:0080125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue.","definition_xrefs":["GOC:dhl"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular structure septum development (obsolete GO:0080125)","termid":"GO:0080125"}


id: GO:0010219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"vernalization response","termid":"GO:0010048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vernalization response","termid":"GO:0010219"}


id: MONDO:0005657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aspergillosis is an infection, growth, or allergic response caused by the Aspergillus fungus. There are several different kinds of aspergillosis. One kind is allergic bronchopulmonary aspergillosis (also called ABPA), a condition where the fungus causes allergic respiratory symptoms similar to asthma, such as wheezing and coughing, but does not actually invade and destroy tissue. Another kind of aspergillosis is invasive aspergillosis. This infection usually affects people with weakened immune systems due to cancer, AIDS, leukemia, organ transplantation, chemotherapy, or other conditions or events that reduce the number of normal white blood cells. In this condition, the fungus invades and damages tissues in the body. Invasive aspergillosis most commonly affects the lungs, but can also cause infection in many other organs and can spread throughout the body (commonly affecting the kidneys and brain). Aspergilloma, a growth (fungus ball) that develops in an area of previous lung disease such as tuberculosis or lung abscess, is a third kind of aspergillosis. This type of aspergillosis is composed of a tangled mass of fungus fibers, blood clots, and white blood cells. The fungus ball gradually enlarges, destroying lung tissue in the process, but usually does not spread to other areas.","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillosis","secondary_identifiers":["MESH:D001228","SCTID:65553006","MEDGEN:13939","UMLS:C0004030","MedDRA:10003488","GARD:5856","DOID:13564","ICD10CM:B44","Orphanet:1163","icd11.foundation:1913468488","CSP:1988-4002","ICD9:117.3","NCIT:C2886","NORD:814","EFO:0007157"],"synonyms":[{"name":"infection due to Aspergillus","type":"exact"}],"termid":"MONDO:0005657","xrefs":{"Monarch":{"xref_id":"0005657"}}}


id: MONDO:1010709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trimethylaminuria (fishy taint) that occurs in mallard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"trimethylaminuria (fishy taint), non-human animal","termid":"MONDO:1010104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria (fishy taint), mallard","secondary_identifiers":["OMIA:001360-8839"],"termid":"MONDO:1010709","xrefs":{"Monarch":{"xref_id":"1010709"}}}


id: FYPO:0004909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed, and the protein is instead distributed throughout the nucleus.","definition_xrefs":["PMID:8937982","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus","synonyms":[{"name":"abolished punctate nuclear protein localization, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localisation, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein dispersed through nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during vegetative growth","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed throughout nucleus","type":"exact"}],"termid":"FYPO:0004909"}


id: GO:1905478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["PMID:10377385","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-ammonia ligase activity (obsolete GO:1905478)","synonyms":[{"name":"regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"regulation of L-glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905478"}


id: PBO:0089030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transporting P-type ATPase P2 type, Pmc1","termid":"PBO:0089030"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"part_of","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: MONDO:0958234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bethlem myopathy","termid":"MONDO:0008029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Bethlem myopathy 1C","secondary_identifiers":["OMIM:620726","UMLS:C5935581","MEDGEN:1854240"],"termid":"MONDO:0958234","xrefs":{"Monarch":{"xref_id":"0958234"}}}


id: GO:0018911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.","definition_xrefs":["PMID:1987135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,4-trichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbz"],"synonyms":[{"name":"1,2,4-trichlorobenzene metabolic process","type":"broad"},{"name":"1,2,4-trichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018911"}


id: PBO:0040871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMI1 proto-oncogene, polycomb ring finger pseudogene 1","termid":"PBO:0040871"}


id: GO:0004110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone = 20-hydroxy-3-oxopregn-4-en-21-al.","definition_xrefs":["RHEA:17861","EC:5.3.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"corticosteroid side-chain-isomerase activity","secondary_identifiers":["MetaCyc:CORTICOSTEROID-SIDE-CHAIN-ISOMERASE-RXN","KEGG_REACTION:R04165"],"synonyms":[{"name":"11-deoxycorticosterone aldose-ketose-isomerase activity","type":"related"},{"name":"11-deoxycorticosterone ketol-isomerase activity","type":"related"}],"termid":"GO:0004110"}


id: MONDO:0015338
data:
  {"annotated_genes":["SJAG_03249","SJAG_04995","SJAG_04270","SJAG_02165","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[85049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85503,85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[86576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"A craniosynostosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"syndromic craniosynostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19911","UMLS:C5680624","Orphanet:139393","MEDGEN:1842203"],"synonyms":[{"name":"syndrome associated with craniosynostosis","type":"exact"},{"name":"syndromic craniosynostosis","type":"exact"}],"termid":"MONDO:0015338","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0015338"}}}


id: PBO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034580"}


id: PBO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 3","termid":"PBO:0051485"}


id: GO:0004347
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69986],"is_not":false,"summary":null,"term":"GO:0004347"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["RHEA:11816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"glucose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70471","MetaCyc:PGLUCISOM-RXN","Reactome:R-HSA-70475","EC:5.3.1.9"],"synonyms":[{"name":"D-glucose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"glucose phosphate isomerase activity","type":"related"},{"name":"hexose monophosphate isomerase activity","type":"broad"},{"name":"hexose phosphate isomerase activity","type":"related"},{"name":"hexosephosphate isomerase activity","type":"broad"},{"name":"oxoisomerase activity","type":"related"},{"name":"phosphoglucoisomerase activity","type":"related"},{"name":"phosphoglucose isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphohexose isomerase activity","type":"broad"},{"name":"phosphosaccharomutase activity","type":"broad"}],"termid":"GO:0004347","terms_by_termid":{"GO:0004347":null}}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: MONDO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial caudal dysgenesis is a rare, genetic, developmental defect during embryogenesis disorder characterized by varying degrees of caudal dysgenesis, ranging from a single umbilical artery or imperforate anus to full sirenomelia, in several members of the same family. Phenotype includes lumbosacral agenesis, anal atresia or ectopia, genitourinary abnormalities, components of VATER or VACTERL association, and facial dysmorphism (flat facies, abnormal ears, bilateral epicanthic folds, depressed nasal bridge, micrognathia). Additional features reported include cardiovascular (e.g. endocardial cushion defect, hypoplasia of pulmonary artery) and skeletal (kyphosis, hemipelvis) anomalies.","definition_xrefs":["Orphanet:1768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"caudal regression-sirenomelia spectrum","termid":"MONDO:0018639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial caudal dysgenesis","secondary_identifiers":["NCIT:C99054","SCTID:722493007","OMIM:600145","UMLS:C2931053","GARD:215","MEDGEN:418973"],"synonyms":[{"name":"Rudd-Klimek syndrome","type":"exact"},{"name":"SDAM","type":"related"},{"name":"Sdam","type":"related"},{"name":"caudal dysgenesis familial type","type":"related"},{"name":"caudal dysgenesis syndrome","type":"related"},{"name":"caudal regression","type":"exact"},{"name":"caudal regression syndrome","type":"related"},{"name":"familial caudal dysgenesis","type":"exact"},{"name":"sacral agenesis","type":"related"},{"name":"sacral defect with anterior meningocele","type":"related"},{"name":"sirenomelia","type":"related"}],"termid":"MONDO:0010831","xrefs":{"Monarch":{"xref_id":"0010831"}}}


id: PBO:0090799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ASTRA complex, phosphatidylinositol pseudokinase Tra1","termid":"PBO:0090799"}


id: PBO:0054586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1989","termid":"PBO:0054586"}


id: CHEBI:168396
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolic acid","termid":"CHEBI:168396"}


id: GO:0021727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the intermediate reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate reticular formation development","synonyms":[{"name":"intermediate reticular nucleus development","type":"exact"}],"termid":"GO:0021727"}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: GO:0034411
data:
  {"annotated_genes":["SJAG_01835","SJAG_01288","SJAG_03587","SJAG_04771","SJAG_04666","SJAG_04668","SJAG_01290","SJAG_01255","SJAG_04659","SJAG_00876","SJAG_05285","SJAG_01787","SJAG_03705","SJAG_04462","SJAG_04483","SJAG_00218","SJAG_00610","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[115845,70671,113183,75707,91562,72907,106118,74398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[87472,92389],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[118063,102848,105358,90733,105930,117938,92373],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"},{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"cell wall beta-1,3-glucan formation","type":"exact"},{"name":"cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034411","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: GO:0097092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose metabolic process","synonyms":[{"name":"polyacyltrehalose metabolism","type":"exact"}],"termid":"GO:0097092"}


id: PBO:0110159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAse Z, nuclear 3'-tRNA processing endonuclease Trz1","termid":"PBO:0110159"}


id: PBO:0082701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque; a membrane-organizing center which is assembled on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane; potential Cdc28p substrate","termid":"PBO:0082701"}


id: RO:HOM0000075
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_regulogy_relationship_with","synonyms":[{"name":"regulogous to","type":"exact"}],"termid":"RO:HOM0000075"}


id: MONDO:0007222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brachydactyly characterized by short and broad terminal phalanges of the thumbs and big toes that has material basis in mutation in the HOXD13 gene on chromosome 2q31.1.","definition_xrefs":["PMID:12649808","DOID:0110971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type D","secondary_identifiers":["MEDGEN:66313","icd11.foundation:642882691","OMIM:113200","Orphanet:93385","MESH:C562420","UMLS:C0220664"],"synonyms":[{"name":"BDD","type":"exact"},{"name":"brachydactyly, type D","type":"related"},{"name":"stub thumb","type":"related"}],"termid":"MONDO:0007222","xrefs":{"Monarch":{"xref_id":"0007222"}}}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: PBO:0046710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETV7 and PTX1 antisense RNA 1","termid":"PBO:0046710"}


id: MONDO:0800149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any commonn variable immunodeficiency in which the cause of the disease is an autosomal recessive variation in the TNFS13 gene.","definition_xrefs":["PMID:32298700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, due to APRIL deficiency","termid":"MONDO:0800149","xrefs":{"Monarch":{"xref_id":"0800149"}}}


id: PBO:0027519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiotic_interphase","termid":"PBO:0027519"}


id: PBO:0084990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase; reduces multiple substrates including 2-methylbutyraldehyde and D,L-glyceraldehyde, expression is induced by osmotic and oxidative stress; functionally redundant with other aldo-keto reductases; protein abundance increases in response to DNA replication stress; YPR1 has a paralog, GCY1, that arose from the whole genome duplication; human homolog AKR1B1 can complement yeast null mutant","termid":"PBO:0084990"}


id: PBO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec73 (predicted)","termid":"PBO:0001574"}


id: PBO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_colony_morphology","termid":"PBO:0030294"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0082412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase; formaldehyde dehydrogenase activity is glutathione-dependent; functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082412"}


id: PBO:0083847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)","termid":"PBO:0083847"}


id: GO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-R3 methylation (obsolete GO:0043985)","synonyms":[{"name":"histone H4 R3 methylation","type":"exact"},{"name":"histone H4 methylation at R3","type":"exact"},{"name":"histone H4R3me","type":"exact"}],"termid":"GO:0043985"}


id: PBO:0087641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance","termid":"PBO:0087641"}


id: PBO:0058100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-2","termid":"PBO:0058100"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: FYPO:0006846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased total protein level during vegetative growth","synonyms":[{"name":"decreased total protein accumulation during vegetative growth","type":"related"},{"name":"decreased total protein content during vegetative growth","type":"exact"},{"name":"decreased total protein level during mitotic cell cycle","type":"related"},{"name":"reduced total protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0006846"}


id: GO:2000844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of testosterone secretion","termid":"GO:2000843"},{"relation_name":"negatively_regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of testosterone secretion","termid":"GO:2000844"}


id: SO:1000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000074 sequence_variant_causing_cryptic_splice_activation (obsolete SO:1000074)","synonyms":[{"name":"cryptic splice activator sequence variant","type":"exact"},{"name":"mutation causing cryptic splice activator","type":"related"},{"name":"sequence variant causing cryptic splice activator","type":"exact"}],"termid":"SO:1000074"}


id: GO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:isa_complete","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"},{"relation_name":"part_of","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue homeostasis","synonyms":[{"name":"tissue maintenance","type":"narrow"}],"termid":"GO:0001894"}


id: PBO:0079671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 1","termid":"PBO:0079671"}


id: GO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045565)","synonyms":[{"name":"down regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045565"}


id: MONDO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any of the several infectious disorders caused by members of streptococcus, a genus of gram positive bacteria belonging to the family Streptococcaceae. Streptococcal infections are classified into Groups A, B, C, D and G.","definition_xrefs":["NCIT:C87062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal infection","secondary_identifiers":["SCTID:85769006","UMLS:C0038395","ICD9:041.00","ICD9:041.09","MESH:D013290","EFO:1001476","MEDGEN:20963"],"synonyms":[{"name":"Streptococcus caused disease or disorder","type":"exact"},{"name":"Streptococcus disease or disorder","type":"exact"},{"name":"Streptococcus infectious disease","type":"exact"},{"name":"infection, streptococcal","type":"related"},{"name":"infections, streptococcal","type":"related"},{"name":"streptococcal infection","type":"exact"}],"termid":"MONDO:0021680","xrefs":{"Monarch":{"xref_id":"0021680"}}}


id: _global:decreased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a lower extent than in a preceding phase or process, where the experiment does not distinguish between decreased addition and increased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_during","termid":"_global:decreased_during"}


id: PBO:0039569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 63","termid":"PBO:0039569"}


id: PBO:0077317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52B","termid":"PBO:0077317"}


id: GO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (betaine or gamma-aminobutyric acid)(out) + Na+(out) = (betaine or gamma-aminobutyric acid)(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete betaine/GABA:sodium symporter activity (obsolete GO:0015376)","synonyms":[{"name":"betaine/GABA:sodium symporter activity","type":"exact"}],"termid":"GO:0015376"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: MONDO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete persistent generalized lymphadenopathy (obsolete MONDO:0000742)","secondary_identifiers":["SCTID:95892003","DOID:0060314"],"synonyms":[{"name":"PGL","type":"exact"}],"termid":"MONDO:0000742","xrefs":{"Monarch":{"xref_id":"0000742"}}}


id: SO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe increase in cds length that inserts one or more codons into the coding sequence within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_insertion","termid":"SO:0001821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_insertion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_insertion","type":"exact"},{"name":"disruptive increase in CDS length","type":"exact"},{"name":"disruptive inframe insertion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_INSERTION","type":"exact"}],"termid":"SO:0001824"}


id: GO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"}


id: PBO:0015221
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(2)","termid":"PBO:0015221"}


id: PBO:0035898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaerobic_cell_population_growth","termid":"PBO:0035898"}


id: PBO:0066956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 258","termid":"PBO:0066956"}


id: PATO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avidity","termid":"PATO:0002073"}


id: PBO:0044827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 114","termid":"PBO:0044827"}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: PBO:0077764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 divergent transcript","termid":"PBO:0077764"}


id: PBO:0056907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 2","termid":"PBO:0056907"}


id: PBO:0060912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEXN antisense RNA 1","termid":"PBO:0060912"}


id: PBO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUAK family kinase 2","termid":"PBO:0061598"}


id: PR:P87115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA cytidine acetyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00570","PANTHER:PTHR10925:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA cytidine acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.09c","secondary_identifiers":["UniProtKB:P87115"],"synonyms":[{"name":"18S rRNA cytosine acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAT10","type":"exact"}],"termid":"PR:P87115"}


id: FYECO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cd ions","synonyms":[{"name":"cadmium ions added","type":"exact"}],"termid":"FYECO:0000033"}


id: MONDO:0004860
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[87110,87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","definition":"A disease involving the vitreous humor.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous body disorder","termid":"MONDO:0044137"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9720","ICD9:379.24","UMLS:C0700141","MEDGEN:1843447"],"synonyms":[{"name":"disease of vitreous humor","type":"exact"},{"name":"disease of vitreous humour","type":"exact"},{"name":"disease or disorder of vitreous humor","type":"exact"},{"name":"disease or disorder of vitreous humour","type":"exact"},{"name":"disorder of vitreous humor","type":"exact"},{"name":"disorder of vitreous humour","type":"exact"},{"name":"vitreous humor disease","type":"exact"},{"name":"vitreous humor disease or disorder","type":"exact"},{"name":"vitreous humour disease","type":"exact"},{"name":"vitreous humour disease or disorder","type":"exact"}],"termid":"MONDO:0004860","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0004860"}}}


id: PBO:0045815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 5","termid":"PBO:0045815"}


id: MONDO:0004559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of malignant peripheral nerve sheath tumor characterized by the presence of glandular epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant glandular tumor of peripheral nerve sheath","secondary_identifiers":["NCIT:C6560","SCTID:699659007","DOID:8420","UMLS:C1333821","ICD9:171.9","MEDGEN:232558"],"synonyms":[{"name":"glandular MPNST","type":"exact"},{"name":"glandular malignant peripheral nerve sheath tumor","type":"exact"},{"name":"glandular malignant peripheral nerve sheath tumour","type":"exact"},{"name":"malignant glandular neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant glandular neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant glandular peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant glandular peripheral nerve sheath tumor","type":"exact"},{"name":"malignant glandular peripheral nerve sheath tumour","type":"exact"},{"name":"malignant glandular schwannoma","type":"exact"},{"name":"malignant glandular tumor of peripheral nerve sheath","type":"exact"},{"name":"malignant glandular tumor of the peripheral nerve sheath","type":"exact"},{"name":"malignant glandular tumour of the peripheral nerve sheath","type":"exact"}],"termid":"MONDO:0004559","xrefs":{"Monarch":{"xref_id":"0004559"}}}


id: PR:000027728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1","synonyms":[{"name":"Myosin type II heavy chain 1","type":"exact"},{"name":"myo2","type":"exact"}],"termid":"PR:000027728"}


id: PBO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin associated protein 3","termid":"PBO:0052392"}


id: FYPO:0007456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3' overhang single-stranded DNA endodeoxyribonuclease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased 3' overhang single-stranded DNA endodeoxyribonuclease activity","termid":"FYPO:0007456"}


id: PR:Q9UT27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyl transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.10c","synonyms":[{"name":"PvGal synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg1","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT27"}


id: GO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host respiratory system process (obsolete GO:0044064)","synonyms":[{"name":"regulation by symbiont of host respiratory system process","type":"exact"}],"termid":"GO:0044064"}


id: MONDO:0005438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The spread of a malignant neoplasm to the lymph nodes.","definition_xrefs":["NCIT:C4904"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"lymph node cancer","termid":"MONDO:0001082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the lymph nodes","secondary_identifiers":["UMLS:C0686619","EFO:0004906","MEDGEN:151947"],"synonyms":[{"name":"Metastases to lymph nodes","type":"exact"},{"name":"metastasis to lymph node","type":"exact"},{"name":"metastatic malignant neoplasm to the lymph nodes","type":"exact"},{"name":"metastatic neoplasm to the lymph node","type":"exact"},{"name":"metastatic tumor to lymph node","type":"exact"},{"name":"metastatic tumour to lymph node","type":"exact"}],"termid":"MONDO:0005438","xrefs":{"Monarch":{"xref_id":"0005438"}}}


id: PR:O74739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12143:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.14","secondary_identifiers":["UniProtKB:O74739"],"synonyms":[{"name":"PNGase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.14","type":"related"},{"name":"Spom972h-NGLY1","type":"exact"},{"name":"peptide:N-glycanase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74739"}


id: GO:0097434
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101666],"is_not":false,"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + H+(out) = succinate(in) + H+(in).","definition_xrefs":["PMID:1293882","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"succinate:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29303"],"synonyms":[{"name":"succinate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097434","terms_by_termid":{"GO:0097434":null}}


id: PBO:0056116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 1","termid":"PBO:0056116"}


id: PBO:0073709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Skint1 like (pseudogene)","termid":"PBO:0073709"}


id: GO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a cell as part of an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion","termid":"GO:0001821"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"histamine production involved in inflammatory response","termid":"GO:0002349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"histamine secretion involved in inflammatory response","synonyms":[{"name":"histamine secretion involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002441"}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: GO:1904911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["GOC:BHF_telomere","PMID:26586433","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"negatively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of RNA localization to telomere","synonyms":[{"name":"down regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localization to telomere","type":"exact"},{"name":"inhibition of establishment of RNA localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of RNA localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:1904911"}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: PBO:0002959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sulfhydryl oxidase (predicted)","termid":"PBO:0002959"}


id: RO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has skeleton","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeleton_of","termid":"RO:0002576"}


id: GO:0034450
data:
  {"annotated_genes":["SJAG_02685"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74774],"is_not":false,"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["PMID:17190603","GOC:mcc","PMID:10089879","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin protein ligase activity","termid":"GO:0061630"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0019787","GO:0003674","GO:0004842","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"ubiquitin-ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-937050","Reactome:R-HSA-975122"],"synonyms":[{"name":"E4","type":"exact"}],"termid":"GO:0034450","terms_by_termid":{"GO:0034450":null}}


id: GO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of large proteins such as globin, casein and denatured serum albumin, in presence of ATP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase La activity (obsolete GO:0008846)","synonyms":[{"name":"ATP-dependent lon proteinase","type":"narrow"},{"name":"ATP-dependent protease La activity","type":"related"},{"name":"ATP-dependent serine proteinase activity","type":"related"},{"name":"Escherichia coli proteinase La","type":"related"},{"name":"Escherichia coli serine proteinase La","type":"related"},{"name":"PIM1 protease activity","type":"related"},{"name":"PIM1 proteinase activity","type":"related"},{"name":"endopeptidase La activity","type":"exact"},{"name":"gene lon protease activity","type":"related"},{"name":"gene lon proteins","type":"related"},{"name":"lon proteinase","type":"narrow"},{"name":"protease La","type":"related"},{"name":"proteinase La","type":"related"},{"name":"serine protease La","type":"related"}],"termid":"GO:0008846"}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: GO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ribulokinase activity","secondary_identifiers":["MetaCyc:RIBULOKIN-RXN","RHEA:22072"],"synonyms":[{"name":"ATP:L(or D)-ribulose 5-phosphotransferase activity","type":"related"},{"name":"L-ribulokinase activity","type":"exact"},{"name":"ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0008741"}


id: MONDO:0023419
data:
  {"annotated_genes":["SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[86658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia is when there isan excess of a particular protein building block (amino acid), called proline, in the blood. This condition generally occurs when proline is not broken down properly by the body. There are two inherited forms:hyperprolinemia type1 and hyperprolinemia type 2. People with hyperprolinemia type I often do not show any symptoms, although they have proline levels in their blood between 3 and 10 times the normal level. Less commonly, affected individuals can experience seizures, intellectual disability, or other neurological or psychiatric problems. Hyperprolinemia is caused by mutations in the PRODH gene and is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0002847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperprolinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:59655002","UMLS:C0268528","MEDGEN:75690","NANDO:2200471","DOID:0080541","ICD9:270.8","GARD:2847"],"synonyms":[{"name":"hyperprolinemia type 1","type":"related"},{"name":"proline hydrogenase deficiency","type":"related"},{"name":"proline oxidase deficiency","type":"related"}],"termid":"MONDO:0023419","terms_by_termid":{"MONDO:0009400":null,"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0023419"}}}


id: GO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oleic acid, the 18-carbon monounsaturated fatty acid (9Z)-octadec-9-enoic acid.","definition_xrefs":["GOC:mah","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"oleic acid binding","termid":"GO:0070538"}


id: SO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exemplar is a representative cDNA sequence for each gene. The exemplar approach is a method that usually involves some initial clustering into gene groups and the subsequent selection of a representative from each gene group.","direct_ancestors":[{"relation_name":"has_quality","term_name":"exemplar","termid":"SO:0000864"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_mRNA","synonyms":[{"name":"exemplar mRNA","type":"exact"}],"termid":"SO:0000734"}


id: PBO:0089300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq9","termid":"PBO:0089300"}


id: SO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Crick strand is the strand whose 5'-end is on the long arm of the chromosome. Of note, the term 'minus strand' is typically based on a reference sequence where it's preferred for the minus strand to be the Crick strand, but might not be and 'minus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crick_strand","synonyms":[{"name":"Bottom strand","type":"exact"},{"name":"Crick strand","type":"exact"},{"name":"Minus strand","type":"broad"},{"name":"Reverse strand","type":"exact"}],"termid":"SO:0002263"}


id: PATO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perfoliate","termid":"PATO:0001983"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: PR:O59830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C965.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.10","synonyms":[{"name":"Spom972h-SPCC965.10","type":"exact"}],"termid":"PR:O59830"}


id: PBO:0049810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 3","termid":"PBO:0049810"}


id: GO:0106286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-caffeate + ATP + CoA = (E)-caffeoyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:36299","PMID:22649270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(E)-caffeate-CoA ligase activity","termid":"GO:0106286"}


id: MONDO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrioventricular septal defect in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"},{"relation_name":"is_a","term_name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular septal defect 4","secondary_identifiers":["OMIM:614430","UMLS:C3280781","MEDGEN:482411"],"synonyms":[{"name":"AVSD4","type":"related"},{"name":"GATA4 atrioventricular septal defect","type":"exact"},{"name":"atrioventricular septal defect 4","type":"exact"},{"name":"atrioventricular septal defect caused by mutation in GATA4","type":"exact"},{"name":"atrioventricular septal defect type 4","type":"exact"}],"termid":"MONDO:0013747","xrefs":{"Monarch":{"xref_id":"0013747"}}}


id: PBO:0078451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 4","termid":"PBO:0078451"}


id: MONDO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serious heritable structural anomalies of the left side of the heart, including hypoplastic left heart syndrome, aortic valve stenosis, coarctation of the aorta, mitral valve anomalies and bicuspid aortic valve, that are present from birth.","definition_xrefs":["EFO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital left-sided heart lesions","secondary_identifiers":["UMLS:C4022397","MEDGEN:868006"],"termid":"MONDO:0005584","xrefs":{"Monarch":{"xref_id":"0005584"}}}


id: GO:0019636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonoacetate, C2H4PO5, a substance composed of an acetate and a phosphonic acid residue.","definition_xrefs":["MetaCyc:P483-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phosphonoacetate metabolic process","synonyms":[{"name":"phosphonoacetate metabolism","type":"exact"}],"termid":"GO:0019636"}


id: PBO:0004250
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate myristic acid preferring","termid":"PBO:0004250"}


id: PBO:0062436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 100 pseudogene","termid":"PBO:0062436"}


id: PR:O94578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mic26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.05c","synonyms":[{"name":"Spom972h-mic26","type":"exact"}],"termid":"PR:O94578"}


id: MONDO:0029813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with premature aging (obsolete MONDO:0029813)","secondary_identifiers":["Orphanet:300766"],"termid":"MONDO:0029813","xrefs":{"Monarch":{"xref_id":"0029813"}}}


id: SO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ref_miRNA (RefSeq-miRNA) sequence is assigned at the creation of a new mature miRNA entry in a database. The ref_miRNA sequence designation remains unchanged even if a different isomiR is later shown to be expressed at a higher level. A ref_miRNA can be produced by one or multiple pre-miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ref_miRNA","synonyms":[{"name":"RefSeq miRNA","type":"exact"},{"name":"RefSeq-miRNA","type":"exact"},{"name":"ref miRNA","type":"exact"}],"termid":"SO:0002166"}


id: GO:0045820
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72967,75963],"is_not":false,"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"negatively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"negative regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of glycolysis","type":"exact"},{"name":"down-regulation of glycolysis","type":"exact"},{"name":"downregulation of glycolysis","type":"exact"},{"name":"inhibition of glycolysis","type":"narrow"}],"termid":"GO:0045820","terms_by_termid":{"GO:0045820":null}}


id: GO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the pronephric nephron acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric tubule identity","termid":"GO:0039005"}


id: PBO:0058967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKS transition zone complex subunit 1","termid":"PBO:0058967"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: GO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043002)","synonyms":[{"name":"down regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane CFTR protein transport","type":"narrow"}],"termid":"GO:0043002"}


id: FYPO:0003088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork arrest","synonyms":[{"name":"abnormal replication fork arrest during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest during vegetative growth","type":"exact"}],"termid":"FYPO:0003088"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: MONDO:0019485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute encephalopathy with inflammation-mediated status epilepticus characterized by infancy-onset of refractory unilateral, mainly clonic status epilepticus during or shortly after a febrile episode without evidence of central nervous system infection, followed by permanent or transient hemiplegia with a minimum duration of one week. The majority of children develop pharmaco-resistant epilepsy a few months later. Brain imaging shows edematous swelling of the affected hemisphere at the time of the initial status, followed by hemiatrophy that does not correlate with any vascular territory.","definition_xrefs":["Orphanet:86908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"idiopathic hemiconvulsion-hemiplegia syndrome","secondary_identifiers":["MEDGEN:639806","SCTID:230407006","NANDO:1200596","UMLS:C0549118","GARD:19085"],"synonyms":[{"name":"HHE syndrome","type":"exact"},{"name":"IHHS","type":"exact"},{"name":"hemiconvulsion-hemiplegia-epilepsy syndrome","type":"exact"}],"termid":"MONDO:0019485","xrefs":{"Monarch":{"xref_id":"0019485"}}}


id: PR:Q9HGN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36B7.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGN5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase C36B7.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.05c","synonyms":[{"name":"Spom972h-SPBC36B7.05c","type":"exact"}],"termid":"PR:Q9HGN5"}


id: MONDO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The X-linked variant of the Hyper-IgM syndrome. The affected individuals are virtually always male, because males only have one X chromosome, received from their mothers. Their mothers are not symptomatic, even though they are carriers of the allele, because the trait is recessive. Male offspring of these women have a 50% chance of inheriting their mother's mutant allele.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgM syndrome type 1","secondary_identifiers":["NCIT:C61244","OMIM:308230","GARD:73","Orphanet:101088","NORD:1261","SCTID:403835002","DOID:6620","UMLS:C0398689","DOID:0060022","MEDGEN:96019"],"synonyms":[{"name":"CD40 ligand deficiency","type":"related"},{"name":"HIGM","type":"related"},{"name":"HIGM1","type":"exact"},{"name":"HIGMX-1","type":"exact"},{"name":"Hyper IgM Syndromes","type":"exact"},{"name":"IHIS","type":"related"},{"name":"X-linked hyper IgM syndrome","type":"related"},{"name":"X-linked hyper-IgM syndrome","type":"exact"},{"name":"XHIGM","type":"exact"},{"name":"XHIM","type":"related"},{"name":"hyper IgM immunodeficiency, X-linked","type":"related"},{"name":"hyper IgM syndrome","type":"related"},{"name":"hyper IgM syndrome 1","type":"related"},{"name":"hyper-IgM immunodeficiency, X-linked","type":"related"},{"name":"hyper-IgM syndrome","type":"related"},{"name":"hyper-IgM syndrome 1","type":"related"},{"name":"hyper-IgM syndrome due to CD40 ligand deficiency","type":"exact"},{"name":"hyper-IgM syndrome due to CD40L deficiency","type":"exact"},{"name":"hyper-IgM syndrome type 1","type":"exact"},{"name":"hyper-IgM syndrome, X-linked","type":"exact"},{"name":"hyperimmunoglobulin M syndrome","type":"exact"},{"name":"immunodeficiency 3","type":"related"},{"name":"immunodeficiency with hyper IgM type 1","type":"related"},{"name":"immunodeficiency with hyper-IgM, type 1","type":"related"},{"name":"immunodeficiency, X-linked, with hyper-IgM, X-linked recessive","type":"exact"}],"termid":"MONDO:0010626","xrefs":{"Monarch":{"xref_id":"0010626"}}}


id: PBO:0051232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-30-21 (pseudogene)","termid":"PBO:0051232"}


id: PBO:0076671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2 pseudogene 1","termid":"PBO:0076671"}


id: PBO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2 family protein (predicted)","termid":"PBO:0004444"}


id: MONDO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleuropneumonia of cattle and goats caused by species of mycoplasma.","definition_xrefs":["MESH:D011002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contagious pleuropneumonia","secondary_identifiers":["EFO:0007221","MEDGEN:19357","UMLS:C0032243"],"termid":"MONDO:0005716","xrefs":{"Monarch":{"xref_id":"0005716"}}}


id: GO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"prenol metabolic process","termid":"GO:0016090"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"prenol biosynthetic process","synonyms":[{"name":"prenol anabolism","type":"exact"},{"name":"prenol biosynthesis","type":"exact"},{"name":"prenol formation","type":"exact"},{"name":"prenol synthesis","type":"exact"}],"termid":"GO:0016091"}


id: PBO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14 (predicted)","termid":"PBO:0001012"}


id: PBO:0056385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 15","termid":"PBO:0056385"}


id: GO:0031983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane or protein that forms a vesicle.","definition_xrefs":["GOC:vesicles","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"vesicle","termid":"GO:0031982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vesicle lumen","secondary_identifiers":["NIF_Subcellular:sao797538226"],"termid":"GO:0031983"}


id: PBO:0076063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 1","termid":"PBO:0076063"}


id: PBO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myxothiazol","termid":"PBO:0035942"}


id: PR:O14264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfg10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.09c","synonyms":[{"name":"Spom972h-dfg10","type":"exact"}],"termid":"PR:O14264"}


id: PBO:0063594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 7","termid":"PBO:0063594"}


id: PBO:0064574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PORCN divergent transcript","termid":"PBO:0064574"}


id: MONDO:0011082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculofrontonasal syndrome","secondary_identifiers":["MEDGEN:316969","OMIM:601452","GARD:4031","Orphanet:398156","UMLS:C1832352","MESH:C537865"],"synonyms":[{"name":"OAFNS","type":"exact"},{"name":"OCULOAURICULOFRONTONASAL syndrome","type":"related"},{"name":"oculoauriculofrontonasal dysplasia","type":"related"},{"name":"oculoauriculofrontonasal syndrome","type":"exact"}],"termid":"MONDO:0011082","xrefs":{"Monarch":{"xref_id":"0011082"}}}


id: _global:output_of
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"inverse of has output","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"output_of","secondary_identifiers":["RO:0002353"],"synonyms":[{"name":"formation results from","type":"exact"}],"termid":"_global:output_of"}


id: MONDO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is an infectious inflammatory disease of a circumscribed area of either the vestibular or the cochlear portion of the labyrinth, or of both together. This is caused by a chronic suppurative otitis media, mastoiditis, or cholesteatoma.","definition_xrefs":["DOID:13867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal labyrinthitis","secondary_identifiers":["SCTID:61794006","UMLS:C0155505","ICD9:386.32","icd11.foundation:1257091364","MEDGEN:509994"],"synonyms":[{"name":"circumscribed labyrinthitis","type":"exact"}],"termid":"MONDO:0001820","xrefs":{"Monarch":{"xref_id":"0001820"}}}


id: GO:0018831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-1,2,4-trihydroxybenzene = Cl- + H+ + 2-hydroxy-1,4-benzoquinone.","definition_xrefs":["UM-BBD_reactionID:r0666"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-1,2,4-trihydroxybenzene dechlorinase activity (obsolete GO:0018831)","termid":"GO:0018831"}


id: PBO:0074021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14 pseudogene 1","termid":"PBO:0074021"}


id: GO:0043518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction by p53 class mediator","termid":"GO:1901797"},{"relation_name":"negatively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"negative regulation of p53 induced by DNA damage response","type":"exact"}],"termid":"GO:0043518"}


id: FYPO:0000858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleosome positioning in heterochromatin","synonyms":[{"name":"normal nucleosome occupancy in heterochromatin","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000858"}


id: MONDO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal benign glandular hyperplasia in the prostate gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic adenoma","secondary_identifiers":["MEDGEN:105447","SCTID:266569009","MESH:D011470","ICD9:600.20","DOID:2883","NCIT:C4795","SCTID:21173002","UMLS:C0520477"],"synonyms":[{"name":"adenoma - prostate","type":"exact"},{"name":"adenoma of prostate","type":"exact"},{"name":"adenoma of the prostate","type":"exact"},{"name":"benign adenoma of prostate","type":"exact"},{"name":"prostate adenoma","type":"exact"},{"name":"prostate gland adenoma","type":"exact"}],"termid":"MONDO:0002450","xrefs":{"Monarch":{"xref_id":"0002450"}}}


id: PBO:0058827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8057","termid":"PBO:0058827"}


id: GO:0021704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus morphogenesis","termid":"GO:0021704"}


id: FYPO:0000862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"normal centromeric histone H3-K9 dimethylation","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000862"}


id: GO:0006547
data:
  {"annotated_genes":["SJAG_00248","SJAG_03775","SJAG_01346","SJAG_02400","SJAG_04747","SJAG_03055","SJAG_01137","SJAG_00592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60047,64188,80131,70998,76531,75643,78397,57843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-histidine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["Wikipedia:Histidine"],"synonyms":[{"name":"histidine metabolic process","type":"broad"},{"name":"histidine metabolism","type":"exact"}],"termid":"GO:0006547","terms_by_termid":{"GO:0000105":null}}


id: GO:0015116
data:
  {"annotated_genes":["SJAG_01941","SJAG_00671","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73770,88371],"is_not":false,"summary":null,"term":"GO:0015116"},{"annotations":[65563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875871","Reactome:R-HSA-3560789","Reactome:R-HSA-427555"],"synonyms":[{"name":"sulfate permease activity","type":"related"},{"name":"sulphate transporter activity","type":"exact"}],"termid":"GO:0015116","terms_by_termid":{"GO:0008271":null,"GO:0015116":null}}


id: GO:0072259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast development","termid":"GO:0072141"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast development","synonyms":[{"name":"metanephros interstitial cell development","type":"exact"}],"termid":"GO:0072259"}


id: PR:Q9HDZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat domain phosphoinositide-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01297","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.07c","secondary_identifiers":["UniProtKB:Q9HDZ7"],"synonyms":[{"name":"Spom972h-WIPI2","type":"exact"}],"termid":"PR:Q9HDZ7"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["EC:2.7.7.75","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: FYPO:0004934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during mitotic G1 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G1 phase","type":"related"},{"name":"increased RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G1 phase","type":"narrow"},{"name":"increased transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004934"}


id: MONDO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal atrial tachycardia is a rare supraventricular arrhythmia in neonates and young infants that is characterized by multiple P waves with varying P wave morphology and is usually asymptomatic.","definition_xrefs":["Orphanet:3282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"multifocal atrial tachycardia","secondary_identifiers":["ICD9:427.89","HP:0011701","MEDGEN:66362","SCTID:49982000","UMLS:C0221158","GARD:1235","icd11.foundation:262929566"],"synonyms":[{"name":"MAT","type":"exact"},{"name":"chaotic atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia (disease)","type":"exact"}],"termid":"MONDO:0017988","xrefs":{"Monarch":{"xref_id":"0017988"}}}


id: PBO:0043199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase B pseudogene 1","termid":"PBO:0043199"}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: PBO:0072327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 13","termid":"PBO:0072327"}


id: GO:0097730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable array of axonemal microtubules but does not contain molecular motors.","definition_xrefs":["GOC:dgh","PMID:17009929","GOC:kmv","PMID:22118931","PMID:20144998","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-motile cilium","secondary_identifiers":["GO:0031513"],"synonyms":[{"name":"immotile cilium","type":"exact"},{"name":"immotile primary cilium","type":"related"},{"name":"nonmotile cilium","type":"exact"},{"name":"nonmotile primary cilia","type":"related"},{"name":"nonmotile primary cilium","type":"related"},{"name":"sensory cilium","type":"related"}],"termid":"GO:0097730"}


id: PBO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAV3 antisense RNA 1","termid":"PBO:0080148"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0046798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor III, tissue factor","termid":"PBO:0046798"}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: PBO:0088347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase Hom2","termid":"PBO:0088347"}


id: MONDO:0007766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morgagni-Stewart-Morel syndrome is characterized by thickening of the inner table of the frontal bone, sometimes associated with obesity and hypertrichosis. It mainly affects women over 35 years of age. The prevalence and clinical significance of hyperostosis frontalis interna is unknown. Transmission is either X-linked or autosomal dominant.","definition_xrefs":["Orphanet:77296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morgagni-Stewart-Morel syndrome","secondary_identifiers":["GARD:8593","MEDGEN:9367","MESH:D006957","NCIT:C84772","OMIM:144800","SCTID:82054006","NORD:1268","UMLS:C0020494"],"synonyms":[{"name":"Hyperostosis Frontalis Interna","type":"exact"},{"name":"MSM syndrome","type":"related"},{"name":"Morgagni-Stewart-Morel syndrome","type":"exact"},{"name":"hyperostosis frontalis interna","type":"exact"},{"name":"hyperostosis frontalis interna, obesity, shortness and cognitive impairment","type":"related"}],"termid":"MONDO:0007766","xrefs":{"Monarch":{"xref_id":"0007766"}}}


id: MONDO:0018995
data:
  {"annotated_genes":["SJAG_03046","SJAG_02289","SJAG_04495","SJAG_04334","SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011066"},{"annotations":[87025,87024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[86730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012640"},{"annotations":[85904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4 (CMT4) belongs to the genetically heterogeneous group of CMT peripheral sensorimotor polyneuropathy diseases.","definition_xrefs":["Orphanet:64749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_03046":null,"SJAG_03248":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715795005","GARD:12440","UMLS:C4082197","MEDGEN:905419","DOID:0050541"],"synonyms":[{"name":"AR-CMT1","type":"exact"},{"name":"CMT4","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth","type":"exact"}],"termid":"MONDO:0018995","terms_by_termid":{"MONDO:0011066":null,"MONDO:0011534":null,"MONDO:0012640":null,"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0018995"}}}


id: GO:1990014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Square array of closely spaced intramembrane particles, 4-6 nm in size, that form supramolecular aggregates found in the plasma membrane of astrocytes, skeletal muscle and epithelial cells. They have been shown to contain aquaporins (water channels).","definition_xrefs":["NIF_Subcellular:sao1747012216","PMID:22718347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"orthogonal array","synonyms":[{"name":"OAP","type":"related"},{"name":"orthogonal array of particles","type":"exact"},{"name":"square array","type":"related"}],"termid":"GO:1990014"}


id: PBO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like protein","termid":"PBO:0005146"}


id: PBO:0064600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 2","termid":"PBO:0064600"}


id: PBO:0079856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B5 (pseudogene)","termid":"PBO:0079856"}


id: GO:0046752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which viral capsid precursors are transported to a specific location in the nucleus, thus accumulating the necessary components for assembly of a capsid.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete viral capsid precursor transport to host cell nucleus (obsolete GO:0046752)","synonyms":[{"name":"establishment and maintenance of viral capsid precursor localization in nucleus","type":"broad"},{"name":"localization of viral capsid precursors in nucleus","type":"broad"},{"name":"nuclear localization of viral capsid precursors","type":"broad"},{"name":"viral capsid precursor localisation in host cell nucleus","type":"broad"},{"name":"viral capsid precursor localization in host cell nucleus","type":"broad"},{"name":"viral capsid precursor localization to host cell nucleus","type":"broad"}],"termid":"GO:0046752"}


id: PBO:0054083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1433","termid":"PBO:0054083"}


id: MONDO:0017875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bolivian hemorrhagic fever (BHF), caused by the Machupo virus (MACV), is a severe acute viral hemorrhagic fever characterized by fever, myalgia, and arthralgia followed by hemorrhagic and neurological manifestations.","definition_xrefs":["Orphanet:319229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bolivian hemorrhagic fever","secondary_identifiers":["MEDGEN:76386","SCTID:67247008","UMLS:C0282192","GARD:21412","icd11.foundation:1780467429","MedDRA:10005932","DOID:0050195"],"synonyms":[{"name":"Machupo hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017875","xrefs":{"Monarch":{"xref_id":"0017875"}}}


id: GO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ecdysteroid metabolic process","synonyms":[{"name":"down regulation of ecdysteroid metabolic process","type":"exact"},{"name":"down-regulation of ecdysteroid metabolic process","type":"exact"},{"name":"downregulation of ecdysteroid metabolic process","type":"exact"},{"name":"inhibition of ecdysteroid metabolic process","type":"narrow"},{"name":"negative regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0045965"}


id: PBO:0085689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of cell wall composition and integrity; also involved in cell wall response to osmotic stress; overproduction suppresses a lysis sensitive PKC mutation; HLR1 has a paralog, LRE1, that arose from the whole genome duplication","termid":"PBO:0085689"}


id: GO:0051854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism causes the formation in its symbiont organism of an abnormal growth whose cells have been transformed and continue to exist in the absence of the first organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth containing transformed cells (obsolete GO:0051854)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth containing transformed cells","type":"exact"}],"termid":"GO:0051854"}


id: PBO:0110394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 2","termid":"PBO:0110394"}


id: GO:0018339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid, typical of bacterial ribosomal protein S12.","definition_xrefs":["RESID:AA0232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid","synonyms":[{"name":"peptidyl-L-beta-methylthioaspartic acid anabolism from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-L-beta-methylthioaspartic acid formation from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-L-beta-methylthioaspartic acid synthesis from peptidyl-aspartic acid","type":"exact"},{"name":"peptidyl-aspartic acid methylthiolation","type":"exact"}],"termid":"GO:0018339"}


id: GO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of male sex of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex determination","termid":"GO:0030238"}


id: GO:0032759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"positively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TRAIL production","secondary_identifiers":["GO:0045556"],"synonyms":[{"name":"activation of TRAIL production","type":"narrow"},{"name":"positive regulation of TRAIL biosynthetic process","type":"narrow"},{"name":"stimulation of TRAIL production","type":"narrow"},{"name":"up regulation of TRAIL production","type":"exact"},{"name":"up-regulation of TRAIL production","type":"exact"},{"name":"upregulation of TRAIL production","type":"exact"}],"termid":"GO:0032759"}


id: FYPO:0002271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize glutamine, and therefore requires glutamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for glutamine","synonyms":[{"name":"glutamine auxotrophy","type":"exact"},{"name":"growth auxotrophic for glutamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for glutamine during vegetative growth","type":"exact"}],"termid":"FYPO:0002271"}


id: PBO:0067557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 709, pseudogene","termid":"PBO:0067557"}


id: FYPO:0001941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cerulenin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cerulenin","synonyms":[{"name":"resistance to cerulenin during mitotic cell cycle","type":"related"},{"name":"resistance to cerulenin during vegetative growth","type":"exact"},{"name":"resistant to cerulenin","type":"exact"}],"termid":"FYPO:0001941"}


id: FYPO:0003327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"curved microtubules","termid":"FYPO:0004862"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"curved interphase microtubules","synonyms":[{"name":"curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"curved interphase cytoplasmic microtubules","type":"exact"},{"name":"curved interphase microtubules during mitotic cell cycle","type":"related"},{"name":"curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003327"}


id: GO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a sequence of DNA that is a termination site for bacterial-type RNA polymerase in order to promote transcription termination by bacterial-type RNA polymerase.","definition_xrefs":["PMID:18280161","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, bacterial-type RNA polymerase termination site sequence-specific binding (obsolete GO:0001149)","synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity","type":"exact"}],"termid":"GO:0001149"}


id: GO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibitor of the establishment of competence for transformation activity (obsolete GO:0045306)","synonyms":[{"name":"inhibitor of the establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045306"}


id: PBO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 gamma subunit","termid":"PBO:0002862"}


id: PBO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_sister_chromatid_separation_during_interphase","termid":"PBO:0032694"}


id: MONDO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome, associating familial adult medullary cystic disease with spastic quadriparesis has been described in two cases so far. Renal transplantation was successful in those two patients.","definition_xrefs":["Orphanet:2666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult familial nephronophthisis-spastic quadriparesia syndrome","secondary_identifiers":["UMLS:C4518090","GARD:18777","MEDGEN:1385988"],"termid":"MONDO:0017044","xrefs":{"Monarch":{"xref_id":"0017044"}}}


id: PBO:0085929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial-dependent role in the extension of chronological lifespan; overexpression increases oxygen consumption and respiratory activity while deletion results in reduced oxygen consumption under conditions of caloric restriction; induced by iron homeostasis transcription factor Aft2p; multicopy suppressor of temperature sensitive hsf1 mutant; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0085929"}


id: GO:0032874
data:
  {"annotated_genes":["SJAG_03705","SJAG_04666","SJAG_01787","SJAG_03969","SJAG_00424","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117937,92386,90731,88038,89392,102846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"positive regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070304"},{"relation_name":"positively_regulates","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of stress-activated MAPK cascade","type":"narrow"},{"name":"positive regulation of p38 MAPK signaling","type":"exact"},{"name":"positive regulation of p38 MAPK signalling","type":"exact"},{"name":"positive regulation of stress-activated MAPK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPK signalling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK cascade","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK signalling pathway","type":"exact"},{"name":"stimulation of stress-activated MAPK cascade","type":"narrow"},{"name":"up regulation of stress-activated MAPK cascade","type":"exact"},{"name":"up-regulation of stress-activated MAPK cascade","type":"exact"},{"name":"upregulation of stress-activated MAPK cascade","type":"exact"}],"termid":"GO:0032874","terms_by_termid":{"GO:1903139":null}}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: PBO:0063011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein membrane anchor with glycosphingolipid microdomains 1","termid":"PBO:0063011"}


id: MONDO:0017221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The connatal form of Pelizaeus-Merzbacher disease (PMD) is the most severe form of PMD.","definition_xrefs":["Orphanet:280210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease, connatal form","secondary_identifiers":["UMLS:C5679776","icd11.foundation:1118374715","MEDGEN:1842817","GARD:17291"],"synonyms":[{"name":"Pelizaeus-Merzbacher disease type II","type":"exact"},{"name":"connatal PMD","type":"exact"},{"name":"severe PMD","type":"exact"}],"termid":"MONDO:0017221","xrefs":{"Monarch":{"xref_id":"0017221"}}}


id: GO:1990164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of a phosphate group.","definition_xrefs":["PMID:23080121","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A phosphorylation (obsolete GO:1990164)","termid":"GO:1990164"}


id: MONDO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that arises from infection in an immunologically compromised host and is systemic.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic systemic mycosis","termid":"MONDO:0045033","xrefs":{"Monarch":{"xref_id":"0045033"}}}


id: GO:0141058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0032452","GO:0003824"],"is_obsolete":false,"name":"histone H4 demethylase activity","termid":"GO:0141058"}


id: PBO:0056751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 2","termid":"PBO:0056751"}


id: PBO:0067731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 29","termid":"PBO:0067731"}


id: PBO:0053913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1208","termid":"PBO:0053913"}


id: GO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 acetylation (obsolete GO:0043966)","termid":"GO:0043966"}


id: PR:Q9UUH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metallophosphoesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.12","secondary_identifiers":["UniProtKB:Q9UUH0"],"synonyms":[{"name":"Spom972h-MPPE1","type":"exact"}],"termid":"PR:Q9UUH0"}


id: PBO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2463","termid":"PBO:0055048"}


id: PBO:0049421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gulonolactone (L-) oxidase, pseudogene","termid":"PBO:0049421"}


id: PR:P40370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1815.01","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno101","type":"exact"}],"termid":"PR:P40370"}


id: PBO:0076762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase 1","termid":"PBO:0076762"}


id: RO:HOM0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves parts of the same organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_iterative_homology_relationship_with","synonyms":[{"name":"iterative homologous to","type":"exact"}],"termid":"RO:HOM0000066"}


id: GO:0035868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to high mobility group box 1 protein.","definition_xrefs":["PMID:20826760","GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-HMGB1 complex","synonyms":[{"name":"alphav-beta3 integrin-high mobility group box 1 complex","type":"exact"}],"termid":"GO:0035868"}


id: MOD:01155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a lipid-like group either through acylation, alkylation, or amidation.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoconjugated residue","termid":"MOD:01155"}


id: MOD:01511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01511"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: PBO:0077865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 6","termid":"PBO:0077865"}


id: _global:results_in_determination_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","secondary_identifiers":["RO:0002349","GOREL:0001018"],"termid":"_global:results_in_determination_of"}


id: GO:1905063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","PMID:19088079","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"regulation of VSMC differentiation","type":"exact"},{"name":"regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905063"}


id: PBO:0052321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1217","termid":"PBO:0052321"}


id: GO:0043048
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80239],"is_not":false,"summary":null,"term":"GO:0043048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a phosphorylated dolichol derivative.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dolichyl monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dolichyl monophosphate anabolism","type":"exact"},{"name":"dolichyl monophosphate biosynthesis","type":"exact"},{"name":"dolichyl monophosphate formation","type":"exact"},{"name":"dolichyl monophosphate synthesis","type":"exact"}],"termid":"GO:0043048","terms_by_termid":{"GO:0043048":null}}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000120","FYPO:0000054"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: FYPO:0005917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin regions is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"increased subtelomeric heterochromatin RNA level","synonyms":[{"name":"accumulation of subtelomere-derived RNA transcripts","type":"related"},{"name":"increased transcription at subtelomere","type":"narrow"},{"name":"increased transcription at subtelomeric heterochromatin during vegetative growth","type":"narrow"}],"termid":"FYPO:0005917"}


id: FYPO:0006242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication forks stall at a lower frequency in mutant cells than in wild type during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:28806726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased replication fork stalling during cellular response to DNA damage","synonyms":[{"name":"decreased frequency of replication fork stalling during cellular response to DNA damage","type":"exact"},{"name":"decreased replication fork stalling during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased replication fork stalling during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced replication fork stalling during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006242"}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: PBO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRCB domain protein","termid":"PBO:0000103"}


id: GO:0033263
data:
  {"annotated_genes":["SJAG_03005","SJAG_01598","SJAG_00204","SJAG_02315","SJAG_05194","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69284,71725,90132,100303,116917,118454],"is_not":false,"summary":null,"term":"GO:0033263"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that acts as an endosomal tethering complex (CORVET = class C core vacuole/endosome tethering) by cooperating with Rab GTPases to capture endosomal vesicles and trap them prior to the action of SNAREs; the complex is involved in endo-lysosomal biogenesis and required for transport between endosome and vacuole. The Saccharomyces cerevisiae complex contains Vps8p, Vps3p, Pep5p, Vps16p, Pep3p, and Vps33p.","definition_xrefs":["PMID:17488625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_01598":null,"SJAG_02315":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0031410","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"CORVET complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0033263","terms_by_termid":{"GO:0033263":null}}


id: MOD:01886
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an sulfanyl or substituted sulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiolated residue","termid":"MOD:01886"}


id: GO:0018399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-4'-bromophenylalanine.","definition_xrefs":["RESID:AA0176"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-4'-bromophenylalanine (obsolete GO:0018399)","termid":"GO:0018399"}


id: MONDO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, darkly pigmented skin lesion characterized by proliferation of keratinocytes and melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanoacanthoma","secondary_identifiers":["UMLS:C1321683","Wikipedia:Melanocanthoma","MEDGEN:272110","NCIT:C27548","DOID:11684","SCTID:394727000","EFO:1000733"],"termid":"MONDO:0006579","xrefs":{"Monarch":{"xref_id":"0006579"}}}


id: MONDO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastic tumor characterized by the presence of a ganglioneuroblastoma component and the formation of Schwannian stroma which is the predominant component of the tumor volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nodular ganglioneuroblastoma","termid":"MONDO:0003325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stroma-dominant and stroma-poor composite ganglioneuroblastoma","secondary_identifiers":["DOID:7949","NCIT:C42060","UMLS:C1516761","MEDGEN:275793"],"synonyms":[{"name":"composite ganglioneuroblastoma, Stroma-dominant and Stroma-poor","type":"exact"}],"termid":"MONDO:0004407","xrefs":{"Monarch":{"xref_id":"0004407"}}}


id: GO:0070043
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94873],"is_not":false,"summary":null,"term":"GO:0070043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N7-methylguanine.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790982"],"termid":"GO:0070043","terms_by_termid":{"GO:0070043":null}}


id: MONDO:0016780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 microdeletion syndrome","secondary_identifiers":["UMLS:C5679639","MEDGEN:1842589","GARD:17220","Orphanet:254525"],"synonyms":[{"name":"paternal del(14)(q32.2)","type":"exact"},{"name":"paternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016780","xrefs":{"Monarch":{"xref_id":"0016780"}}}


id: PBO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1B","termid":"PBO:0042893"}


id: PBO:0050557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRas proto-oncogene, GTPase","termid":"PBO:0050557"}


id: GO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell migration","termid":"GO:0061581"}


id: PBO:0059414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36","termid":"PBO:0059414"}


id: PBO:0081191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 4","termid":"PBO:0081191"}


id: PBO:0080234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA21","termid":"PBO:0080234"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: PBO:0049781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 15","termid":"PBO:0049781"}


id: GO:0102338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxotetracosanoyl-CoA. + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-lignoceronyl-CoA synthase activity (obsolete GO:0102338)","termid":"GO:0102338"}


id: MONDO:0858999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM3B-related intellectual disability-facial dysmorphism-short stature syndrome","secondary_identifiers":["Orphanet:633004"],"termid":"MONDO:0858999","xrefs":{"Monarch":{"xref_id":"0858999"}}}


id: MONDO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insulitis is an inflammatory infiltration of the islets of Langerhans found especially in young patients with recent onset type 1 diabetes.","definition_xrefs":["EFO:0002498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"aggressive insulitis","termid":"MONDO:0005175","xrefs":{"Monarch":{"xref_id":"0005175"}}}


id: PBO:0057055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 140","termid":"PBO:0057055"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"polyketide metabolic process","synonyms":[{"name":"polyketide metabolism","type":"exact"}],"termid":"GO:0030638"}


id: PBO:0083547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YBL095W","termid":"PBO:0083547"}


id: GO:0033951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 1,4-beta-D-xylose residues from the reducing end of oligosaccharides.","definition_xrefs":["EC:3.2.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"oligosaccharide reducing-end xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.156-RXN"],"synonyms":[{"name":"Rex","type":"related"},{"name":"beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose reducing-end xylanase activity","type":"related"},{"name":"reducing end xylose-releasing exo-oligoxylanase activity","type":"related"}],"termid":"GO:0033951"}


id: PBO:0041288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1r","termid":"PBO:0041288"}


id: GO:0016671
data:
  {"annotated_genes":["SJAG_04060","SJAG_00419","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[76850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[60657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[79909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016671","terms_by_termid":{"GO:0004604":null,"GO:0008113":null,"GO:0033743":null,"GO:0036456":null}}


id: PBO:0082736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate","termid":"PBO:0082736"}


id: GO:0060924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrial cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell fate commitment","synonyms":[{"name":"atrial cardiomyocyte cell fate commitment","type":"related"},{"name":"atrial heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060924"}


id: FYPO:0000104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cycloheximide. Cells stop growing (and may die) at a concentration of cycloheximide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cycloheximide","synonyms":[{"name":"hypersensitive to cycloheximide","type":"exact"},{"name":"sensitive to cycloheximide during mitotic cell cycle","type":"related"},{"name":"sensitive to cycloheximide during vegetative growth","type":"exact"}],"termid":"FYPO:0000104"}


id: PBO:0050352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 55","termid":"PBO:0050352"}


id: GO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont causes vasodilation of blood vessels in its host organism, usually causing a reduction in blood pressure. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:15637157"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated vasodilation in host (obsolete GO:0044552)","synonyms":[{"name":"modulation of vasodilation in other organism","type":"related"},{"name":"regulation of vasodilation in other organism","type":"related"},{"name":"vasodilation in other organism","type":"exact"}],"termid":"GO:0044552"}


id: PR:Q9USY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug131 gene.","definition_xrefs":["UniProtKB:Q9USY0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 131 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.06c","synonyms":[{"name":"Spom972h-mug131","type":"exact"}],"termid":"PR:Q9USY0"}


id: PBO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 148 pseudogene","termid":"PBO:0070216"}


id: PBO:0082116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-coA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions","termid":"PBO:0082116"}


id: PBO:0039737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein F","termid":"PBO:0039737"}


id: PBO:0052856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-16","termid":"PBO:0052856"}


id: MONDO:1010066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, non-human animal","secondary_identifiers":["OMIA:000645"],"termid":"MONDO:1010066","xrefs":{"Monarch":{"xref_id":"1010066"}}}


id: PBO:0082951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds the drug cyclosporin A; N-terminally propionylated in vivo; protein abundance increases in response to DNA replication stress","termid":"PBO:0082951"}


id: GO:0015719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"allantoate transport","synonyms":[{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015719"}


id: PBO:0065831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7A, member RAS oncogene family","termid":"PBO:0065831"}


id: PBO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-2","termid":"PBO:0052934"}


id: GO:1902252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:14569084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"positively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte apoptotic process","synonyms":[{"name":"activation of RBC apoptosis","type":"narrow"},{"name":"activation of RBC apoptotic process","type":"narrow"},{"name":"activation of erythrocyte apoptosis","type":"narrow"},{"name":"activation of erythrocyte apoptotic process","type":"narrow"},{"name":"activation of red blood cell apoptosis","type":"narrow"},{"name":"activation of red blood cell apoptotic process","type":"narrow"},{"name":"positive regulation of RBC apoptosis","type":"narrow"},{"name":"positive regulation of RBC apoptotic process","type":"exact"},{"name":"positive regulation of erythrocyte apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptotic process","type":"exact"},{"name":"up regulation of RBC apoptosis","type":"narrow"},{"name":"up regulation of RBC apoptotic process","type":"exact"},{"name":"up regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up regulation of red blood cell apoptosis","type":"narrow"},{"name":"up regulation of red blood cell apoptotic process","type":"exact"},{"name":"up-regulation of RBC apoptosis","type":"narrow"},{"name":"up-regulation of RBC apoptotic process","type":"exact"},{"name":"up-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up-regulation of red blood cell apoptosis","type":"narrow"},{"name":"up-regulation of red blood cell apoptotic process","type":"exact"},{"name":"upregulation of RBC apoptosis","type":"narrow"},{"name":"upregulation of RBC apoptotic process","type":"exact"},{"name":"upregulation of erythrocyte apoptosis","type":"narrow"},{"name":"upregulation of erythrocyte apoptotic process","type":"exact"},{"name":"upregulation of red blood cell apoptosis","type":"narrow"},{"name":"upregulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902252"}


id: MONDO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of fingers","termid":"MONDO:0017474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers, bilateral","secondary_identifiers":["MEDGEN:1730289","Orphanet:295241","GARD:21228","UMLS:C5437813","icd11.foundation:514958635"],"synonyms":[{"name":"macrodactyly of hand, bilateral","type":"exact"}],"termid":"MONDO:0017565","xrefs":{"Monarch":{"xref_id":"0017565"}}}


id: PBO:0041817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARMIL2 pseudogene 1","termid":"PBO:0041817"}


id: PBO:0038911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F1","termid":"PBO:0038911"}


id: GO:1901091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"negatively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein tetramerization","synonyms":[{"name":"down regulation of protein tetramer assembly","type":"exact"},{"name":"down regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein tetramer formation","type":"exact"},{"name":"down regulation of protein tetramerization","type":"exact"},{"name":"down-regulation of protein tetramer assembly","type":"exact"},{"name":"down-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein tetramer formation","type":"exact"},{"name":"down-regulation of protein tetramerization","type":"exact"},{"name":"downregulation of protein tetramer assembly","type":"exact"},{"name":"downregulation of protein tetramer biosynthesis","type":"exact"},{"name":"downregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein tetramer formation","type":"exact"},{"name":"downregulation of protein tetramerization","type":"exact"},{"name":"inhibition of protein tetramer assembly","type":"narrow"},{"name":"inhibition of protein tetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein tetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein tetramer formation","type":"narrow"},{"name":"inhibition of protein tetramerization","type":"narrow"},{"name":"negative regulation of protein tetramer assembly","type":"exact"},{"name":"negative regulation of protein tetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901091"}


id: PBO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL14 pseudogene 6","termid":"PBO:0070868"}


id: MONDO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 47, and lissencephaly","secondary_identifiers":["MEDGEN:1794161","UMLS:C5561951","OMIM:619466"],"synonyms":[{"name":"CILD47","type":"exact"},{"name":"ciliary dyskinesia, primary, 47, and lissencephaly","type":"exact"}],"termid":"MONDO:0030346","xrefs":{"Monarch":{"xref_id":"0030346"}}}


id: PBO:0084581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL012W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL014W","termid":"PBO:0084581"}


id: GO:2000930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellobiose metabolic process","synonyms":[{"name":"regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000930"}


id: MONDO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, benign, usually self-limited viral infection of the skin and occasionally the conjunctivae by a poxvirus (molluscum contagiosum virus). (Dorland, 27th ed)","definition_xrefs":["MESH:D008976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molluscum contagiosum","secondary_identifiers":["icd11.foundation:82201615","ICD10CM:B08.1","UMLS:C0026393","DOID:8867","EFO:0007375","ICD9:078.0","MEDGEN:10081","SCTID:40070004"],"termid":"MONDO:0005855","xrefs":{"Monarch":{"xref_id":"0005855"}}}


id: PBO:0004044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad60","termid":"PBO:0004044"}


id: PR:000050483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rng2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPAC4F8.13c","type":"related"},{"name":"Spom-rng2","type":"exact"},{"name":"rng2","type":"related"}],"termid":"PR:000050483"}


id: GO:1902588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A plasmodesmata-mediated intercellular transport which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism plasmodesmata-mediated intercellular transport (obsolete GO:1902588)","synonyms":[{"name":"multi organism plasmodesmata-mediated intercellular transport","type":"exact"}],"termid":"GO:1902588"}


id: FYPO:0003500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"viable elongated multiseptate vegetative cell","termid":"FYPO:0001496"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0000005","FYPO:0000032"],"is_obsolete":false,"name":"viable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0003500"}


id: PBO:0056964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-23a/27a/24-2 cluster host gene","termid":"PBO:0056964"}


id: GO:1900282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellobiose catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"regulates","term_name":"cellobiose catabolic process","termid":"GO:2000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellobiose catabolic process","synonyms":[{"name":"regulation of cellobiose catabolism","type":"exact"}],"termid":"GO:1900282"}


id: PBO:0072795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 1","termid":"PBO:0072795"}


id: PBO:0051041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 2 (A2m marker)","termid":"PBO:0051041"}


id: MONDO:0044259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Two types of melanin, the red pheomelanin and the black eumelanin, are present in human skin. {22:Valverde et al. (1995)} noted that eumelanin is photoprotective, whereas pheomelanin may contribute to UV-induced skin damage because of its potential to generate free radicals in response to ultraviolet radiation. Individuals with red hair have a predominance of pheomelanin in hair and skin and/or a reduced ability to produce eumelanin, which may explain why they fail to tan and are at risk from ultraviolet radiation. In mammals, the relative proportions of pheomelanin and eumelanin are regulated by melanocyte-stimulating hormone (see OMIM:176830), which acts via its receptor (MC1R) on melanocytes to increase the synthesis of eumelanin, and also via the product of the agouti locus (AGTI; OMIM:600201), which antagonizes this action.","definition_xrefs":["OMIM:266300"],"gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 2 (obsolete MONDO:0044259)","synonyms":[{"name":"Blond hair/fair skin","type":"related"},{"name":"Red hair color","type":"related"},{"name":"Rha","type":"related"},{"name":"SHEP2","type":"related"},{"name":"UV-induced skin damage","type":"exact"},{"name":"UV-induced skin damage, susceptibility to","type":"related"},{"name":"hair color 2","type":"related"},{"name":"skin/hair/eye pigmentation 2, blond hair/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 2, red hair/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 2","type":"related"}],"termid":"MONDO:0044259","xrefs":{"Monarch":{"xref_id":"0044259"}}}


id: GO:0007435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland morphogenesis","termid":"GO:0007435"}


id: GO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class VI myosin heavy chains and associated light chains. Myosin VI has a single IQ motif in the neck and a tail region with a coiled coil domain followed by a unique globular domain; a unique insertion that enables myosin VI to move towards the pointed or minus end of actin filaments.","definition_xrefs":["PMID:15473855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin VI complex","termid":"GO:0031476"}


id: PBO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member D, pseudogene","termid":"PBO:0047075"}


id: MONDO:0015407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrofacial arteriovenous metameric syndrome","termid":"MONDO:0015405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome type 3","secondary_identifiers":["SCTID:703268008","MEDGEN:824537","GARD:19960","icd11.foundation:1048965538","Orphanet:141199","UMLS:C3838691"],"synonyms":[{"name":"CAMS3","type":"exact"}],"termid":"MONDO:0015407","xrefs":{"Monarch":{"xref_id":"0015407"}}}


id: MONDO:0012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 6q25.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:19073967","DOID:0110758"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 21","secondary_identifiers":["MESH:C567285","MEDGEN:436543","UMLS:C2675865","OMIM:612521"],"synonyms":[{"name":"IDDM21","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 21","type":"related"},{"name":"insulin-dependent diabetes mellitus 21","type":"exact"}],"termid":"MONDO:0012920","xrefs":{"Monarch":{"xref_id":"0012920"}}}


id: PBO:0081604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 528","termid":"PBO:0081604"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: PBO:0040191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 4","termid":"PBO:0040191"}


id: MONDO:0010076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia is characterized by disproportionate short-trunked short stature, pectus carinatum, short arms, short and broad hands, short metatarsals, flat and broad feet, coxa vara, genu valgum, osteoarthritis, arthrosis and moderate-to-serious gait impairment.","definition_xrefs":["Orphanet:93351"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Irapa type","secondary_identifiers":["GARD:16819","MESH:C562958","OMIM:271650","MEDGEN:98476","icd11.foundation:1355637988","SCTID:717330004","UMLS:C0432213"],"synonyms":[{"name":"SEMD, Irapa type","type":"exact"},{"name":"SEMDIT","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Irapa type","type":"exact"}],"termid":"MONDO:0010076","xrefs":{"Monarch":{"xref_id":"0010076"}}}


id: GO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a glycyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0165"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-glycyl-glycosylsphingolipidinositolethanolamine (obsolete GO:0050494)","synonyms":[{"name":"GSI anchor anabolism via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0050494"}


id: MONDO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital organ vascular disease","secondary_identifiers":["MEDGEN:508280","SCTID:198057005","DOID:12335","UMLS:C0042374","ICD9:608.83"],"synonyms":[{"name":"vascular disorder of male genital organs","type":"exact"}],"termid":"MONDO:0001497","xrefs":{"Monarch":{"xref_id":"0001497"}}}


id: MONDO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic syndrome with a cerebellar malformation as major feature characterized by cerebellar vermis hypo- or aplasia, ventriculomegaly, agenesis of corpus callosum and abnormalities of the brainstem and cerebral cortex in association with ocular coloboma. Clinically, patients show hydrocephalus at birth, neonatal hypotonia with abnormal breathing pattern, ocular abnormalities with impaired vision, severe psychomotor delay, and seizures.","definition_xrefs":["Orphanet:163961"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"X-linked cerebral-cerebellar-coloboma syndrome syndrome","secondary_identifiers":["GARD:17006","MEDGEN:477118","OMIM:300864","UMLS:C3275487"],"synonyms":[{"name":"X-linked cerebral-cerebellar-coloboma syndrome","type":"related"},{"name":"X-linked intellectual disability, Kroes type","type":"exact"},{"name":"cerebral-cerebellar-coloboma syndrome, X-linked","type":"related"},{"name":"cerebral-cerebellar-coloboma syndrome, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010464","xrefs":{"Monarch":{"xref_id":"0010464"}}}


id: GO:0021789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","PMID:14699587","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"}


id: PBO:0079198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 1","termid":"PBO:0079198"}


id: MONDO:0015362
data:
  {"annotated_genes":["SJAG_01537","SJAG_01352","SJAG_05289","SJAG_02919","SJAG_04567","SJAG_03815","SJAG_01522","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[85982,85983,85984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[86593,86592,86594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[86276,86278,86277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[85284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[86132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[85661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[86157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[85187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"}]},"cv_name":"mondo","definition":"Autosomal dominant form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5548212","GARD:19926","DOID:0111198","MEDGEN:1787720","OMIMPS:182960","Orphanet:140465"],"synonyms":[{"name":"autosomal dominant dHMN","type":"exact"},{"name":"autosomal dominant distal hereditary motor neuropathy","type":"exact"},{"name":"autosomal dominant distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015362","terms_by_termid":{"MONDO:0008025":null,"MONDO:0010043":null,"MONDO:0011879":null,"MONDO:0012080":null,"MONDO:0013243":null,"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0015362"}}}


id: MONDO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-paraneoplastic limbic encephalitis (obsolete MONDO:0015594)","secondary_identifiers":["Orphanet:163918"],"termid":"MONDO:0015594","xrefs":{"Monarch":{"xref_id":"0015594"}}}


id: PBO:0048144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6-FXYD2 readthrough","termid":"PBO:0048144"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: FYECO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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were performed in medium containing glucose (typically <2% w/v), salts, and water, and may be supplemented with additional amino acids.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined 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type"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"glucose MM","references_by_uniquename":{"PMID:23873862":null,"PMID:30664646":null,"PMID:31956022":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYECO:0000014"],"single_locus_annotated_genes":["SJAG_01355","SJAG_01753","SJAG_04843","SJAG_02527","SJAG_00409","SJAG_02860","SJAG_02796","SJAG_00601","SJAG_04522","SJAG_04697","SJAG_03920","SJAG_05242","SJAG_01458"],"single_locus_genotype_uniquenames":["fum1delta","acb1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","rip1delta","mdh1delta","sdh3delta","cox6delta","gpd1delta","wcs2delta","gms1delta","rga4delta","wcs1delta"],"synonyms":[{"name":"EMM","type":"narrow"},{"name":"EMMC","type":"narrow"},{"name":"SD medium","type":"exact"},{"name":"glucose minimal medium","type":"exact"},{"name":"normal glucose MM","type":"exact"},{"name":"normal glucose minimal medium","type":"exact"},{"name":"standard glucose minimal medium","type":"exact"}],"termid":"FYECO:0000126","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0009965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the leaf are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf morphogenesis","termid":"GO:0009965"}


id: PBO:0086015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole; member of the seripauperin multigene family encoded mainly in subtelomeric regions","termid":"PBO:0086015"}


id: MONDO:0012717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary hypomagnesemia in which the cause of the disease is a mutation in the EGF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 4","secondary_identifiers":["OMIM:611718","DOID:0060882","MESH:C567127","MEDGEN:388692","UMLS:C2673648"],"synonyms":[{"name":"EGF familial primary hypomagnesemia","type":"exact"},{"name":"EGF primary hypomagnesemia","type":"exact"},{"name":"HOMG4","type":"exact"},{"name":"familial primary hypomagnesemia caused by mutation in EGF","type":"exact"},{"name":"hypomagnesemia 4, renal","type":"related"},{"name":"hypomagnesemia, renal, Normocalciuric","type":"related"},{"name":"primary hypomagnesemia caused by mutation in EGF","type":"exact"},{"name":"renal hypomagnesemia type 4","type":"exact"}],"termid":"MONDO:0012717","xrefs":{"Monarch":{"xref_id":"0012717"}}}


id: PBO:0091205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg","termid":"PBO:0091205"}


id: MONDO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human papillomavirus type 18 integration site 1 (obsolete MONDO:0008190)","secondary_identifiers":["OMIM:167959"],"termid":"MONDO:0008190","xrefs":{"Monarch":{"xref_id":"0008190"}}}


id: PBO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 3","termid":"PBO:0070825"}


id: PBO:0030347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_smeared_DNA","termid":"PBO:0030347"}


id: FYPO:0008303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the number of sites at which the protein Rad51 accumulates is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Rad51 foci during meiotic prophase I","termid":"FYPO:0008303"}


id: GO:1903709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an uterine gland over time, from its formation to the mature structure.","definition_xrefs":["PMID:23619340","GOC:TermGenie","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine gland development","synonyms":[{"name":"endometrial gland development","type":"exact"},{"name":"endometrium gland development","type":"exact"},{"name":"glandulae uterinae development","type":"related"},{"name":"glandular part of endometrium development","type":"related"},{"name":"set of uterine glands development","type":"related"},{"name":"uterine glands development","type":"exact"},{"name":"uterine glands set development","type":"exact"}],"termid":"GO:1903709"}


id: PBO:0111876
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0111876"}


id: GO:2000845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of testosterone secretion","termid":"GO:2000843"},{"relation_name":"positively_regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of testosterone secretion","termid":"GO:2000845"}


id: GO:0019318
data:
  {"annotated_genes":["SJAG_00027","SJAG_01784","SJAG_02297","SJAG_01414","SJAG_02796","SJAG_02148","SJAG_05006","SJAG_01310","SJAG_00461","SJAG_00134","SJAG_00240","SJAG_02783","SJAG_02107","SJAG_03660","SJAG_02596","SJAG_03828","SJAG_03818","SJAG_01402","SJAG_00839","SJAG_02135","SJAG_00039","SJAG_04495","SJAG_02369","SJAG_02950","SJAG_02954","SJAG_02009","SJAG_04334","SJAG_03370","SJAG_02696","SJAG_02713","SJAG_03743","SJAG_06622","SJAG_04192","SJAG_02951","SJAG_00605","SJAG_03373","SJAG_06621","SJAG_03903","SJAG_02945","SJAG_03822","SJAG_03336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109411,97986,105471,105472,109409,103641,94985,109407,77806,98261,94495,105841,103387,105470,109408,105840,109406,109405,109410,116376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[61130,94496,69383,63048,67819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006000"},{"annotations":[113731,113738,113749,113737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[61578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006012"},{"annotations":[79047,115864,74446,72023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006006"},{"annotations":[88460,98726,114636,114637,98725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[79097,76117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006013"},{"annotations":[96557],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[75040],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010906"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00039":null,"SJAG_00134":null,"SJAG_00240":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01784":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02596":null,"SJAG_02696":null,"SJAG_02713":null,"SJAG_02783":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03336":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03818":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05006":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"hexose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose metabolism","type":"exact"}],"termid":"GO:0019318","terms_by_termid":{"GO:0006000":null,"GO:0006006":null,"GO:0006012":null,"GO:0006013":null,"GO:0010906":null,"GO:0019655":null,"GO:0033499":null,"GO:0061621":null,"GO:2001172":null}}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: PBO:0074269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 11","termid":"PBO:0074269"}


id: PBO:0025482
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maroteau-Lamy syndrome","termid":"PBO:0025482"}


id: GO:1901727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:20497126"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylase activity (obsolete GO:1901727)","synonyms":[{"name":"activation of histone deacetylase activity","type":"narrow"},{"name":"up regulation of histone deacetylase activity","type":"exact"},{"name":"up-regulation of histone deacetylase activity","type":"exact"},{"name":"upregulation of histone deacetylase activity","type":"exact"}],"termid":"GO:1901727"}


id: MONDO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion presenting as a scaly verrucous plaque. Morphologically, the plaque contains nests of basaloid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"Borst-Jadassohn intraepidermal carcinoma","secondary_identifiers":["DOID:7039","SCTID:403886007","MEDGEN:424845","NCIT:C4110","UMLS:C2937231","ICDO:8096/0"],"synonyms":[{"name":"Bowen's disease, clonal","type":"exact"},{"name":"intraepidermal epithelioma of Jadassohn","type":"exact"}],"termid":"MONDO:0004083","xrefs":{"Monarch":{"xref_id":"0004083"}}}


id: GO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of amino acid neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"amino acid neurotransmitter reuptake","synonyms":[{"name":"amino acid neurotransmitter import into glial cell","type":"narrow"},{"name":"amino acid neurotransmitter import into neuron","type":"narrow"},{"name":"amino acid neurotransmitter recycling","type":"broad"},{"name":"amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051933"}


id: GO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate + NADP+ = 4-methylcatechol + NADPH + H+ + CO2.","definition_xrefs":["EC:1.3.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0179","MetaCyc:1.3.1.67-RXN"],"synonyms":[{"name":"4-methylcyclohexa-3,5-diene-1,2-cis-diol-1-carboxylic acid dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate:NAD(P)+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018520"}


id: PBO:0078297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-2","termid":"PBO:0078297"}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: PBO:0038843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 12","termid":"PBO:0038843"}


id: GO:1903188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:19467235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"positively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitellogenesis","synonyms":[{"name":"activation of vitellogenesis","type":"narrow"},{"name":"activation of yolk production","type":"narrow"},{"name":"positive regulation of yolk production","type":"exact"},{"name":"up regulation of vitellogenesis","type":"exact"},{"name":"up regulation of yolk production","type":"exact"},{"name":"up-regulation of vitellogenesis","type":"exact"},{"name":"up-regulation of yolk production","type":"exact"},{"name":"upregulation of vitellogenesis","type":"exact"},{"name":"upregulation of yolk production","type":"exact"}],"termid":"GO:1903188"}


id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: MONDO:0700216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm associated with expression of a RET (REarranged during Transfection) fusion. RET fusion-positive tumors have been identified in a broad range of solid tumor types, including multiple endocrine neoplasia 2 (MEN2), papillary thyroid carcinoma (PTC), non-small cell lung cancer (NSCLC), invasive breast cancers, and pancreatic ductal adenocarcinomas in addition to colorectal adenocarcinoma, melanoma, small cell lung cancer, neuroblastoma, and small intestine neuroendocrine tumors.","definition_xrefs":["PMID:31715421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RET fusion positive cancer","synonyms":[{"name":"RET fusion positive neoplasm","type":"exact"},{"name":"RET fusion positive solid tumor","type":"exact"},{"name":"RET fusion positive solid tumour","type":"exact"}],"termid":"MONDO:0700216","xrefs":{"Monarch":{"xref_id":"0700216"}}}


id: PBO:0042606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 6","termid":"PBO:0042606"}


id: PBO:0062618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily X member 1","termid":"PBO:0062618"}


id: GO:0050651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dermatan sulfate proteoglycans, which have glycosaminoglycan repeat units consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"dermatan sulfate proteoglycan metabolic process","termid":"GO:0050655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan biosynthetic process","synonyms":[{"name":"chondroitin sulfate B proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulfate B proteoglycan biosynthetic process","type":"exact"},{"name":"dermatan sulfate proteoglycan anabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan biosynthesis","type":"exact"},{"name":"dermatan sulfate proteoglycan formation","type":"exact"},{"name":"dermatan sulfate proteoglycan synthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthetic process","type":"exact"}],"termid":"GO:0050651"}


id: PBO:0065449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 6","termid":"PBO:0065449"}


id: PBO:0046636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 17","termid":"PBO:0046636"}


id: MONDO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 48","secondary_identifiers":["UMLS:C5436823","GARD:16420","DOID:0112176","MEDGEN:1761843","OMIM:619108"],"synonyms":[{"name":"SPGF48","type":"exact"},{"name":"spermatogenic failure 48","type":"exact"}],"termid":"MONDO:0030846","xrefs":{"Monarch":{"xref_id":"0030846"}}}


id: GO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrolase activity","synonyms":[{"name":"activation of hydrolase activity","type":"narrow"},{"name":"hydrolase activator","type":"exact"},{"name":"stimulation of hydrolase activity","type":"narrow"},{"name":"up regulation of hydrolase activity","type":"exact"},{"name":"up-regulation of hydrolase activity","type":"exact"},{"name":"upregulation of hydrolase activity","type":"exact"}],"termid":"GO:0051345"}


id: GO:0022604
data:
  {"annotated_genes":["SJAG_01456","SJAG_00216","SJAG_00514","SJAG_00661","SJAG_04509","SJAG_03705","SJAG_00610","SJAG_02838","SJAG_03486","SJAG_02536","SJAG_02392","SJAG_03581","SJAG_00845","SJAG_00028","SJAG_03637","SJAG_00333","SJAG_02022","SJAG_02169","SJAG_00236","SJAG_00596","SJAG_04724","SJAG_00244","SJAG_04666","SJAG_04322","SJAG_04461","SJAG_04522","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89820,94548,95821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[88009,99740,106867,110775,117933,116506,103492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[90689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[107627,116610],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[93711,100175,105370],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[103703],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[115073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[119449,119448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[113068,94554,118816,91106,95635,104538],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[102849,92394,87854],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"negative regulation of cell shape and cell size","type":"related"},{"name":"positive regulation of cell shape and cell size","type":"related"},{"name":"regulation of cell shape and cell size","type":"related"}],"termid":"GO:0022604","terms_by_termid":{"GO:0008360":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0078296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-1","termid":"PBO:0078296"}


id: MONDO:0013274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the TTC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"TTC8-related ciliopathy","termid":"MONDO:1040049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 51","secondary_identifiers":["ICD10CM:H35.5","DOID:0110398","OMIM:613464","MEDGEN:462065","UMLS:C3150715","GARD:15665"],"synonyms":[{"name":"RP51","type":"exact"},{"name":"TTC8 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 51","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in TTC8","type":"exact"},{"name":"retinitis pigmentosa type 51","type":"exact"}],"termid":"MONDO:0013274","xrefs":{"Monarch":{"xref_id":"0013274"}}}


id: PBO:0062742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 1","termid":"PBO:0062742"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-17809","EC:4.6.1.17","RHEA:49580"],"termid":"GO:0061799"}


id: MONDO:0009608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine malabsorption syndrome","secondary_identifiers":["SCTID:45812003","OMIM:250900","icd11.foundation:1061270147","UMLS:C0268622","MEDGEN:78693","MESH:C562682"],"synonyms":[{"name":"Smith-strang disease","type":"related"},{"name":"methionine malabsorption syndrome","type":"exact"},{"name":"oasthouse urine disease","type":"related"}],"termid":"MONDO:0009608","xrefs":{"Monarch":{"xref_id":"0009608"}}}


id: GO:0033987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (2R,3S)-2,4',7-trihydroxyisoflavanone = daidzein + H+ + H2O, and 2-hydroxy-2,3-dihydrogenistein = genistein + H+ + H2O.","definition_xrefs":["EC:4.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyisoflavanone dehydratase activity","secondary_identifiers":["MetaCyc:RXN-3284"],"synonyms":[{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase (daidzein-forming) activity","type":"related"},{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase activity","type":"related"}],"termid":"GO:0033987"}


id: MONDO:0956996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant, and 1p/19q-codeleted oligodendroglioma that is characterized as a well differentiated tumor lacking anaplastic features (brisk mitotic activity, microvascular proliferation, necrosis).","definition_xrefs":["DOID:0081281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant and 1p/19q-codeleted oligodendroglioma","termid":"MONDO:0859592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma, IDH-mutant and 1p/19q-codeleted grade 2","termid":"MONDO:0956996","xrefs":{"Monarch":{"xref_id":"0956996"}}}


id: PBO:0073588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 3","termid":"PBO:0073588"}


id: _global:coincident_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation that holds between two linear structures that are approximately parallel to each other for their entire length and where either the two structures are adjacent to each other or one is part of the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coincident_with","secondary_identifiers":["RO:0002008"],"termid":"_global:coincident_with"}


id: GO:0051500
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73352],"is_not":false,"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tyrosyl-tRNATyr + H2O = D-tyrosine + tRNATyr. Removal of a D-tyrosine from a charged tRNA(Tyr).","definition_xrefs":["PMID:14527667","RHEA:25347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aminoacyl-tRNA deacylase activity","termid":"GO:0051499"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"D-tyrosyl-tRNA(Tyr) deacylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051500","terms_by_termid":{"GO:0051500":null}}


id: MONDO:0010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TMC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 7","secondary_identifiers":["GARD:22587","DOID:0110520","MEDGEN:322084","MESH:C563417","OMIM:600974","UMLS:C1832978"],"synonyms":[{"name":"DFNB11","type":"narrow"},{"name":"DFNB7","type":"narrow"},{"name":"TMC1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TMC1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 7","type":"exact"},{"name":"deafness, autosomal recessive 11","type":"narrow"},{"name":"deafness, autosomal recessive 7","type":"narrow"},{"name":"deafness, autosomal recessive type 7","type":"narrow"}],"termid":"MONDO:0010967","xrefs":{"Monarch":{"xref_id":"0010967"}}}


id: PBO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15 (predicted)","termid":"PBO:0003421"}


id: GO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanal + H2O + NAD+ = 4-guanidinobutanoate + 2 H+ + NADH.","definition_xrefs":["RHEA:14381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gamma-guanidinobutyraldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:1.2.1.54-RXN","KEGG_REACTION:R03177","EC:1.2.1.54"],"synonyms":[{"name":"4-guanidinobutanal:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"4-guanidinobutyraldehyde dehydrogenase activity","type":"related"},{"name":"GBAL dehydrogenase activity","type":"related"},{"name":"alpha-guanidinobutyraldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047107"}


id: MOD:01557
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01557"}


id: PBO:0089305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA/tRNA cytidine N-acetyltransferase","termid":"PBO:0089305"}


id: GO:1901351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["PMID:12869188","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"regulation of phosphatidylglycerol formation","type":"exact"},{"name":"regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901351"}


id: PBO:0076906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 264, ER-phagy receptor","termid":"PBO:0076906"}


id: PBO:0017489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-never_in_taxon","termid":"PBO:0017489"}


id: GO:1904658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GO_REF:0000058","PMID:1716172","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of sweet taste","termid":"GO:1904656"},{"relation_name":"positively_regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of sweet taste","synonyms":[{"name":"activation of sensory perception of sweet taste","type":"narrow"},{"name":"activation of sweet taste perception","type":"narrow"},{"name":"positive regulation of sweet taste perception","type":"exact"},{"name":"up regulation of sensory perception of sweet taste","type":"exact"},{"name":"up regulation of sweet taste perception","type":"exact"},{"name":"up-regulation of sensory perception of sweet taste","type":"exact"},{"name":"up-regulation of sweet taste perception","type":"exact"},{"name":"upregulation of sensory perception of sweet taste","type":"exact"},{"name":"upregulation of sweet taste perception","type":"exact"}],"termid":"GO:1904658"}


id: GO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chitin","termid":"GO:0010200"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chitin","termid":"GO:0071323"}


id: GO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic A cell and its capacity to differentiate into a pancreatic A cell. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell fate commitment","termid":"GO:0003326"}


id: MONDO:0023204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Fukuda-Miyanomae-Nakata syndrome","secondary_identifiers":["GARD:2411","Orphanet:2060"],"synonyms":[{"name":"Cerebromuscular dystrophy, Fukuyama type","type":"related"},{"name":"FCMD","type":"related"},{"name":"Fukuyama type muscular dystrophy","type":"related"},{"name":"muscular dystrophy, congenital progressive, with intellectual disability","type":"related"},{"name":"muscular dystrophy, congenital progressive, with mental retardation","type":"related"},{"name":"muscular dystrophy, congenital, Fukuyama type","type":"related"},{"name":"muscular dystrophy, congenital, with central nervous system involvement","type":"related"}],"termid":"MONDO:0023204","xrefs":{"Monarch":{"xref_id":"0023204"}}}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: MONDO:0100373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly inv(16)(p13.1;q22). (A chromosomal inversion that involves chromosome 16. It is associated with the development of acute myeloid leukemia CBFB-MYH11, acute myelomonocytic leukemia with abnormal eosinophils, and granulocytic sarcoma.)","definition_xrefs":["NCIT:C36373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, inv(16)(p13.1;q22)","secondary_identifiers":["NCIT:C9018"],"synonyms":[{"name":"AML, inv(16)(p13.1;q22)","type":"exact"},{"name":"AML, inv(16)(p13.1;q22.1)","type":"exact"},{"name":"AML, inv(16)(p13.1q22)","type":"exact"},{"name":"AML, inv(16)(p13.1q22.1)","type":"exact"},{"name":"AML, inv(16)(p13;q22)","type":"exact"},{"name":"AML, inv(16)(p13q22)","type":"exact"}],"termid":"MONDO:0100373","xrefs":{"Monarch":{"xref_id":"0100373"}}}


id: PBO:0027224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_division_timing_change_upon_nitrogen_source_shift","termid":"PBO:0027224"}


id: MONDO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 8p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 8","secondary_identifiers":["UMLS:C4708597","GARD:5361","icd11.foundation:1325415519","MEDGEN:1632060","Orphanet:262758"],"synonyms":[{"name":"8p duplication","type":"related"},{"name":"8p trisomy","type":"related"},{"name":"Duplication 8p","type":"related"},{"name":"chromosome 8p duplication","type":"related"},{"name":"partial duplication of chromosome 8p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 8","type":"exact"},{"name":"partial trisomy 8p","type":"related"},{"name":"partial trisomy of chromosome 8p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 8","type":"exact"},{"name":"trisomy 8p","type":"related"}],"termid":"MONDO:0016945","xrefs":{"Monarch":{"xref_id":"0016945"}}}


id: PATO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated red","synonyms":[{"name":"bright red","type":"related"}],"termid":"PATO:0001283"}


id: FYPO:0005747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein transport","termid":"FYPO:0005747"}


id: GO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of molecules into symbiont","synonyms":[{"name":"transport of molecules into symbiont","type":"exact"}],"termid":"GO:0051862"}


id: GO:1900266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of substance P receptor binding (obsolete GO:1900266)","synonyms":[{"name":"down regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down regulation of substance P receptor binding","type":"exact"},{"name":"down regulation of substance P receptor ligand","type":"narrow"},{"name":"down-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor ligand","type":"narrow"},{"name":"downregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"downregulation of substance P receptor binding","type":"exact"},{"name":"downregulation of substance P receptor ligand","type":"narrow"},{"name":"inhibition of neurokinin-1 receptor binding","type":"exact"},{"name":"inhibition of substance P receptor binding","type":"narrow"},{"name":"inhibition of substance P receptor ligand","type":"narrow"},{"name":"negative regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"negative regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900266"}


id: GO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"micronucleus","secondary_identifiers":["Wikipedia:Micronucleus"],"termid":"GO:0031040"}


id: MONDO:0009790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Opticocochleodentate degeneration","secondary_identifiers":["ICD9:333.90","MEDGEN:101046","OMIM:258700","MESH:C563002","SCTID:77553008","UMLS:C0520711"],"synonyms":[{"name":"Opticocochleodentate degeneration","type":"exact"}],"termid":"MONDO:0009790","xrefs":{"Monarch":{"xref_id":"0009790"}}}


id: FYPO:0000537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein secretion during vegetative growth","synonyms":[{"name":"abolished protein secretion during mitotic cell cycle","type":"related"},{"name":"absent protein secretion during vegetative growth","type":"exact"},{"name":"protein secretion abolished during vegetative growth","type":"exact"},{"name":"protein secretion: absent","type":"related"}],"termid":"FYPO:0000537"}


id: GO:1900362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"positively_regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of pentasaccharide transport","synonyms":[{"name":"activation of pentasaccharide transport","type":"narrow"},{"name":"up regulation of pentasaccharide transport","type":"exact"},{"name":"up-regulation of pentasaccharide transport","type":"exact"},{"name":"upregulation of pentasaccharide transport","type":"exact"}],"termid":"GO:1900362"}


id: GO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation","synonyms":[{"name":"NK cell differentiation","type":"exact"},{"name":"natural killer cell development","type":"related"}],"termid":"GO:0001779"}


id: PBO:0068089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 395","termid":"PBO:0068089"}


id: PATO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000151 relative texture (obsolete PATO:0000151)","termid":"PATO:0000151"}


id: GO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heme b + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = biliverdin + CO + Fe2+ + H+ + 3 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:21764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"heme oxygenase (decyclizing) activity","secondary_identifiers":["Reactome:R-HSA-189398","MetaCyc:HEME-OXYGENASE-DECYCLIZING-RXN","EC:1.14.14.18"],"synonyms":[{"name":"ORP33 proteins","type":"related"},{"name":"haem oxidase activity","type":"related"},{"name":"haem oxygenase (decyclizing) activity","type":"exact"},{"name":"haem oxygenase activity","type":"related"},{"name":"heme oxidase activity","type":"related"},{"name":"heme oxygenase activity","type":"related"},{"name":"heme,hydrogen-donor:oxygen oxidoreductase (alpha-methene-oxidizing, hydroxylating)","type":"related"}],"termid":"GO:0004392"}


id: SOFP:na_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A nucleic acid modification in some variant feature relative to the reference sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"na_change","termid":"SOFP:na_change"}


id: GO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to insect","secondary_identifiers":["GO:0002214"],"synonyms":[{"name":"physiological defense response to insect","type":"exact"}],"termid":"GO:0002213"}


id: GO:1901625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ergosterol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ergosterol","termid":"GO:1901625"}


id: GO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the gut to change their fates and specify the development of the pancreas.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"positive regulation of epithelial tube formation","termid":"GO:1905278"},{"relation_name":"positively_regulates","term_name":"pancreas field specification","termid":"GO:0061131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas induction","termid":"GO:0061132"}


id: MONDO:0019167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic IgA vasculitis that affects small vessels. It is characterized by skin purpura, arthritis, and abdominal and/or renal involvement.","definition_xrefs":["Orphanet:761"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"hypersensitivity vasculitis","termid":"MONDO:0006794"},{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"},{"relation_name":"is_a","term_name":"necrotizing vasculitis","termid":"MONDO:0800113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoglobulin A vasculitis","secondary_identifiers":["MEDGEN:48265","DOID:11123","NCIT:C34963","SCTID:191306005","MESH:D011695","SCTID:86074002","GARD:8204","icd11.foundation:1629105375","UMLS:C0034152","ICD9:287.0"],"synonyms":[{"name":"HSP","type":"exact"},{"name":"Henoch Schonlein purpura","type":"related"},{"name":"Henoch-Schoenlein purpura","type":"exact"},{"name":"Henoch-Scholein purpura","type":"exact"},{"name":"Henoch-Schonlein purpura","type":"exact"},{"name":"IgA vasculitis","type":"exact"},{"name":"Schoenlein-Henoch purpura","type":"exact"},{"name":"allergic purpura","type":"exact"},{"name":"anaphylactoid purpura","type":"exact"},{"name":"autoimmune purpura","type":"exact"},{"name":"purpura rheumatica","type":"exact"},{"name":"purpura, Schonlein-Henoch","type":"related"},{"name":"purpura, autoimmune","type":"exact"},{"name":"rheumatoid purpura","type":"exact"},{"name":"vascular purpura","type":"related"}],"termid":"MONDO:0019167","xrefs":{"Monarch":{"xref_id":"0019167"}}}


id: GO:0071806
data:
  {"annotated_genes":["SJAG_02619","SJAG_04432","SJAG_03440","SJAG_01165","SJAG_00373","SJAG_00175","SJAG_00959","SJAG_02077","SJAG_01120","SJAG_03515","SJAG_00702","SJAG_01640","SJAG_02016","SJAG_02330","SJAG_02208","SJAG_00687","SJAG_03358","SJAG_02917","SJAG_01560","SJAG_03560","SJAG_01684","SJAG_03415","SJAG_03396","SJAG_01597","SJAG_01442","SJAG_02034","SJAG_00196","SJAG_02797","SJAG_01879","SJAG_00326","SJAG_02997","SJAG_02354","SJAG_02588","SJAG_00064","SJAG_00564","SJAG_02693","SJAG_04428","SJAG_03502","SJAG_04129","SJAG_04996","SJAG_01615","SJAG_04218","SJAG_05315","SJAG_03324","SJAG_03684","SJAG_00891","SJAG_04336","SJAG_05259","SJAG_01647","SJAG_05950","SJAG_04014","SJAG_04857"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57132,61250,66442],"is_not":false,"summary":null,"term":"GO:0071806"},{"annotations":[98487,95022,97121],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[73078,80332,97323,73121,73434,108324,98041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031204"},{"annotations":[77083,77551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[96868,99541,116806,99427,89495,109892,111814,99243,105200,107524,90859,94488,107603,106189,117275,103285,100316,102699,107581,115254,88284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[111407,69889,102267,71949,70613,79646,73287,96448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[70444,62526,73721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[98569,117335,64116,115325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[73119,98043,102587,75360,108326,73432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process in which a protein is transported across a membrane.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00196":null,"SJAG_00326":null,"SJAG_00373":null,"SJAG_00564":null,"SJAG_00687":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_00959":null,"SJAG_01120":null,"SJAG_01165":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03358":null,"SJAG_03396":null,"SJAG_03415":null,"SJAG_03440":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03684":null,"SJAG_04014":null,"SJAG_04129":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04428":null,"SJAG_04432":null,"SJAG_04857":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein membrane transport","type":"exact"}],"termid":"GO:0071806","terms_by_termid":{"GO:0006616":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0031204":null,"GO:0045041":null,"GO:0071806":null,"GO:0160203":null}}


id: PBO:0055675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase E, hormone sensitive type","termid":"PBO:0055675"}


id: MONDO:0009766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocerebral hypopigmentation syndrome of Preus","secondary_identifiers":["GARD:4034","OMIM:257790","Orphanet:2720","UMLS:C2931646","SCTID:716174001","MESH:C537866","MEDGEN:419131"],"synonyms":[{"name":"oculocerebral hypopigmentation syndrome of Preus","type":"exact"},{"name":"oculocerebral hypopigmentation syndrome type Preus","type":"related"}],"termid":"MONDO:0009766","xrefs":{"Monarch":{"xref_id":"0009766"}}}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: GO:0048806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia development","synonyms":[{"name":"genital development","type":"exact"}],"termid":"GO:0048806"}


id: PBO:0045147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 5","termid":"PBO:0045147"}


id: PBO:0078564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D1","termid":"PBO:0078564"}


id: PBO:0063108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 1","termid":"PBO:0063108"}


id: MONDO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity carcinoma in situ","termid":"MONDO:0000371"},{"relation_name":"is_a","term_name":"carcinoma of lip","termid":"MONDO:0021333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"lip carcinoma in situ","secondary_identifiers":["DOID:8661","SCTID:92643000","UMLS:C0347082","NCIT:C4588","MEDGEN:83849","ICD9:230.0"],"synonyms":[{"name":"carcinoma in situ of lip","type":"exact"},{"name":"carcinoma in situ of the Lip","type":"exact"},{"name":"lip in situ carcinoma","type":"exact"},{"name":"stage 0 Lip cancer","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 Lip cancer aJCC v7","type":"exact"},{"name":"stage 0 cancer of Lip","type":"exact"},{"name":"stage 0 cancer of the Lip","type":"exact"},{"name":"stage 0 carcinoma of Lip","type":"exact"},{"name":"stage 0 carcinoma of the Lip","type":"exact"},{"name":"stage 0 lip carcinoma","type":"exact"}],"termid":"MONDO:0004636","xrefs":{"Monarch":{"xref_id":"0004636"}}}


id: PBO:0078365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 9-1","termid":"PBO:0078365"}


id: MONDO:1011085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, goat","secondary_identifiers":["OMIA:001033-9925"],"termid":"MONDO:1011085","xrefs":{"Monarch":{"xref_id":"1011085"}}}


id: PR:O13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ima1 gene.","definition_xrefs":["UniProtKB:O13681","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein ima1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.03c","synonyms":[{"name":"Spom972h-ima1","type":"exact"}],"termid":"PR:O13681"}


id: PBO:0048199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha3","termid":"PBO:0048199"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: PBO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies4","termid":"PBO:0000634"}


id: MONDO:0018865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Striate palmoplantar keratoderma is an isolated, focal, hereditary palmoplantar keratoderma characterized by linear hyperkeratosis along the flexor aspect of the fingers and on palms, as well as focal hyperkeratosis of the plantar skin. Patients present with painful thickening of the skin on palms and soles, with occasional fissuring, blistering and hyperhidrosis. Rarely, hyperkeratosis on other areas may be seen (knees, dorsal aspects of the digits). Histopatologically, widened intercellular spaces between keratinocytes are observed.","definition_xrefs":["Orphanet:50942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"striate palmoplantar keratoderma","secondary_identifiers":["MEDGEN:1631598","icd11.foundation:1171134598","DOID:0081105","GARD:15016","SCTID:764958008","UMLS:C4707237"],"synonyms":[{"name":"keratosis palmoplantaris striata","type":"exact"},{"name":"keratosis palmoplantaris striata et areata","type":"exact"},{"name":"keratosis palmoplantaris varians of Wachters","type":"exact"}],"termid":"MONDO:0018865","xrefs":{"Monarch":{"xref_id":"0018865"}}}


id: PBO:0059017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 3","termid":"PBO:0059017"}


id: PBO:0031865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_from","termid":"PBO:0031865"}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: PBO:0017845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transmembrane transporter Cat1","termid":"PBO:0017845"}


id: GO:0009272
data:
  {"annotated_genes":["SJAG_00876","SJAG_05272","SJAG_01290","SJAG_00424","SJAG_01288","SJAG_04850","SJAG_02278","SJAG_04551","SJAG_02684","SJAG_05001","SJAG_03057","SJAG_03587","SJAG_04236","SJAG_02916","SJAG_01835","SJAG_05285","SJAG_01426","SJAG_04851","SJAG_00974","SJAG_01453","SJAG_04238","SJAG_00661","SJAG_04868","SJAG_02727","SJAG_04483","SJAG_02192","SJAG_04666","SJAG_00610","SJAG_03705","SJAG_04184","SJAG_01963","SJAG_01028","SJAG_01171","SJAG_03646","SJAG_00218","SJAG_04878","SJAG_02222","SJAG_01321","SJAG_00310","SJAG_04668","SJAG_04073","SJAG_03013","SJAG_03483","SJAG_03123","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70056,70428,70651,71323,74854,79422,93306,95223,100623,102457,117936],"is_not":false,"summary":null,"term":"GO:0009272"},{"annotations":[94433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88658,90207,91737,88165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[109086,117819,104172,117811,114101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[73143,73281,71372,70409,78640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[70671,115845,72907,91562,106118,74398,113183,75707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[102646,78126],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[101947,95074,108080,101948],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[87472,92389],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[92395,94910,102850,89394],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[100179,92679,102154],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00310":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00876":null,"SJAG_00974":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_02727":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04868":null,"SJAG_04878":null,"SJAG_05001":null,"SJAG_05272":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chitin- and beta-glucan-containing cell wall biogenesis","type":"narrow"},{"name":"fungal-type cell wall anabolism","type":"related"},{"name":"fungal-type cell wall biosynthetic process","type":"related"},{"name":"fungal-type cell wall formation","type":"related"},{"name":"fungal-type cell wall synthesis","type":"related"}],"termid":"GO:0009272","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family","termid":"PBO:0000612"}


id: PBO:0028098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_index","termid":"PBO:0028098"}


id: MONDO:0002442
data:
  {"annotated_genes":["SJAG_04901","SJAG_03764","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85384,85383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[85381,85382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[86668,86669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"}]},"cv_name":"mondo","definition":"A condition that is characterized by episodes of fainting (syncope) and varying degree of ventricular arrhythmia as indicated by the prolonged QT interval. The inherited forms are caused by mutation of genes encoding cardiac ion channel proteins. The two major forms are Romano-Ward syndrome (also known as long QT syndrome 1) and Jervell-Lange Nielsen syndrome.","definition_xrefs":["MESH:D008133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0023976","MEDGEN:44193","NCIT:C34786","ICD10CM:I45.81","NANDO:2100053","DOID:2843","ICD9:426.82","NANDO:2200228"],"synonyms":[{"name":"LQT","type":"exact"},{"name":"long Q-T syndrome","type":"exact"},{"name":"long QT syndrome","type":"exact"},{"name":"ventricular arrhythmia associated with long QT syndrome","type":"exact"}],"termid":"MONDO:0002442","terms_by_termid":{"MONDO:0013367":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0002442"}}}


id: PBO:0081286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70 pseudogene 1","termid":"PBO:0081286"}


id: PBO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase Sry1","termid":"PBO:0015701"}


id: PBO:0028905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028905"}


id: PBO:0029384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029384"}


id: PBO:0058738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6862-2","termid":"PBO:0058738"}


id: GO:0010628
data:
  {"annotated_genes":["SJAG_02458","SJAG_04825","SJAG_02370","SJAG_03279","SJAG_02571","SJAG_03255","SJAG_03787","SJAG_01804","SJAG_00735","SJAG_02723","SJAG_00184","SJAG_00769","SJAG_00868","SJAG_01436","SJAG_04758","SJAG_00743","SJAG_04213","SJAG_00873","SJAG_00739","SJAG_01475","SJAG_01110","SJAG_02541","SJAG_02869","SJAG_01047","SJAG_03758","SJAG_03576","SJAG_02170","SJAG_03883","SJAG_03599","SJAG_04005","SJAG_03668","SJAG_02314","SJAG_02043","SJAG_04596","SJAG_00581","SJAG_07011","SJAG_01111","SJAG_04755","SJAG_00896","SJAG_00746","SJAG_02189","SJAG_04369","SJAG_01517","SJAG_00440","SJAG_03033","SJAG_03579","SJAG_02303","SJAG_02066","SJAG_04097","SJAG_02768","SJAG_01249","SJAG_03283","SJAG_02981","SJAG_01658","SJAG_04205","SJAG_01611","SJAG_03145","SJAG_03366","SJAG_02329","SJAG_04576","SJAG_02589","SJAG_02254","SJAG_00441","SJAG_04946","SJAG_00584","SJAG_03884","SJAG_03776","SJAG_01513","SJAG_04038","SJAG_00087","SJAG_02798","SJAG_01230","SJAG_01653","SJAG_02447","SJAG_03694","SJAG_03696","SJAG_01465","SJAG_03944","SJAG_02018","SJAG_04274","SJAG_02906","SJAG_03441","SJAG_02846","SJAG_01711","SJAG_04435","SJAG_02812","SJAG_05192","SJAG_02773","SJAG_05313","SJAG_01919","SJAG_02872","SJAG_00641","SJAG_05265","SJAG_01016","SJAG_04613","SJAG_03839","SJAG_05020","SJAG_01622","SJAG_03431","SJAG_00045","SJAG_04989","SJAG_00797","SJAG_02927","SJAG_03752","SJAG_01325","SJAG_02573","SJAG_01040","SJAG_04194","SJAG_02466","SJAG_00996","SJAG_00349","SJAG_03550","SJAG_02500","SJAG_02385","SJAG_02549","SJAG_02058"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89476],"is_not":false,"summary":null,"term":"GO:0010628"},{"annotations":[78780,78713,90151,100092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[70567,89441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[89741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[91636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[77209,106666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[106668,117155,69597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[98703,112689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[118442,89429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[92129,110939,74011,75273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[68419,66028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[72685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[76381,66029,68420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[106763,113150,87936,90659,94278,103851,109360,107696,105036,95860,110625,112567,99392,114242,114253,116374,92762,88296,111768,96633,94125,94613,101566,107344,115280,88113,90673,106915,108481,116931,99142,103122,104572,114740,113169,114326,89238,90028,98499,109081,109484,93749,93980,109592,107457,94181,92264,116313,117596,97072,105044,94153,97811,117481,117644,116563,95867,112994,95421,114415,93483,105788,117574,115412,89751,110490,87610,91378,103369,98231,94091,96424,87757,105639,113339,117297,115730,89065,88446,88829,95446,107895,90552,94105,115032,98666,117994,102783,115426,100978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"positively_regulates","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":116,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00797":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00996":null,"SJAG_01016":null,"SJAG_01040":null,"SJAG_01047":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01249":null,"SJAG_01325":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01517":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02043":null,"SJAG_02058":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02189":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02370":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02573":null,"SJAG_02589":null,"SJAG_02723":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02812":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03255":null,"SJAG_03279":null,"SJAG_03283":null,"SJAG_03366":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03550":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03696":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03883":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04435":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04825":null,"SJAG_04946":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05265":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gene expression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010628","terms_by_termid":{"GO:0010628":null,"GO:0045815":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0048026":null,"GO:0048255":null,"GO:0060212":null,"GO:0060906":null,"GO:0061188":null,"GO:0070131":null,"GO:0070134":null,"GO:0070935":null,"GO:0120271":null,"GO:1905746":null,"GO:2000767":null}}


id: PBO:0034732
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding profiling","termid":"PBO:0034732"}


id: PBO:0082636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of GID Complex that confers ubiquitin ligase (U3) activity; necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; forms dimer with Fyv10p that is then recruited to GID Complex by Gid8p; also required for sporulation; conserved protein that has a degenerate RING finger domain","termid":"PBO:0082636"}


id: GO:0072741
data:
  {"annotated_genes":["SJAG_03602","SJAG_02022","SJAG_00279","SJAG_02645","SJAG_04703","SJAG_00333","SJAG_04461","SJAG_02831","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95634],"is_not":false,"summary":null,"term":"GO:0072741"},{"annotations":[94379],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[98427],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[105371,91104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[110815,92295,118670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[107969],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the site of cell division.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_02022":null,"SJAG_02645":null,"SJAG_02831":null,"SJAG_03602":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell division site","type":"exact"}],"termid":"GO:0072741","terms_by_termid":{"GO:0071574":null,"GO:0072741":null,"GO:0120047":null,"GO:0140325":null,"GO:1904498":null,"GO:1905391":null}}


id: PBO:0056346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 4","termid":"PBO:0056346"}


id: PBO:0059078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 1","termid":"PBO:0059078"}


id: PBO:0082260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid permease; involved in uptake of cysteine, leucine, isoleucine and valine; BAP3 has a paralog, BAP2, that arose from the whole genome duplication","termid":"PBO:0082260"}


id: PBO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 22","termid":"PBO:0050244"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: PBO:0059203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X10, pseudogene","termid":"PBO:0059203"}


id: GO:0102666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetyl-beta-4-D-glucose + H2O = H+ + indole-3-acetate + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-beta-4-D-glucose hydrolase activity (obsolete GO:0102666)","termid":"GO:0102666"}


id: MONDO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exostoses, multiple in which the cause of the disease is a mutation in the EXT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary multiple osteochondromas","termid":"MONDO:0005508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses, multiple, type 1","secondary_identifiers":["OMIM:133700","GARD:2204"],"synonyms":[{"name":"EXT","type":"related"},{"name":"EXT1 exostoses, multiple","type":"exact"},{"name":"diaphyseal Aclasis","type":"related"},{"name":"exostoses, multiple caused by mutation in EXT1","type":"exact"},{"name":"exostoses, multiple, type 1","type":"exact"},{"name":"exostoses, multiple, type I","type":"related"},{"name":"multiple cartilaginous exostoses","type":"related"},{"name":"multiple osteochondromas","type":"related"},{"name":"osteochondromatosis","type":"related"}],"termid":"MONDO:0007585","xrefs":{"Monarch":{"xref_id":"0007585"}}}


id: GO:0016162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.91-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-glucan cellobiosidase activity","type":"related"},{"name":"C1 cellulase activity","type":"related"},{"name":"CBH 1","type":"related"},{"name":"avicelase activity","type":"broad"},{"name":"beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"beta-1,4-glucan cellobiosylhydrolase activity","type":"related"},{"name":"cellobiohydrolase I","type":"related"},{"name":"cellobiohydrolase activity","type":"related"},{"name":"cellobiosidase activity","type":"related"},{"name":"exo-1,4-beta-D-glucanase activity","type":"related"},{"name":"exo-beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"exo-cellobiohydrolase activity","type":"related"},{"name":"exocellobiohydrolase activity","type":"related"},{"name":"exoglucanase activity","type":"related"}],"termid":"GO:0016162"}


id: GO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + H2O = anthranilate + L-alanine + H+. Also acts on 3'-hydroxykynurenine and some other (3-arylcarbonyl)- alanines.","definition_xrefs":["EC:3.7.1.3","PMID:17300176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kynureninase activity","secondary_identifiers":["Reactome:R-HSA-71217","MetaCyc:KYNURENINASE-RXN"],"synonyms":[{"name":"L-kynurenine hydrolase activity","type":"related"},{"name":"kynurenine hydrolase activity","type":"related"}],"termid":"GO:0030429"}


id: GO:0031876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a secretin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"secretin receptor binding","synonyms":[{"name":"secretin receptor ligand","type":"narrow"}],"termid":"GO:0031876"}


id: PBO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 109","termid":"PBO:0071107"}


id: PBO:0111807
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0111807"}


id: GO:0060719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chorionic trophoblast over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:16983341","GOC:dph","CL:0011101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"chorionic trophoblast cell differentiation","termid":"GO:0060718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell development","termid":"GO:0060719"}


id: PBO:0063163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 8","termid":"PBO:0063163"}


id: FYPO:0005784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent, and for a shorter time, than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"decreased duration of protein-protein interaction","termid":"FYPO:0005785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased extent and duration of protein-protein interaction","synonyms":[{"name":"decreased extent and duration of protein binding","type":"exact"},{"name":"decreased level and duration of protein-protein interaction","type":"exact"},{"name":"reduced extent and duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005784"}


id: PBO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor Phx1","termid":"PBO:0001555"}


id: PBO:0084120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-binding protein; involved in regulation of cytochrome P450 protein Erg11p; damage response protein, related to mammalian membrane progesterone receptors; mutations lead to defects in telomeres, mitochondria, and sterol synthesis","termid":"PBO:0084120"}


id: PBO:0117157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 34, ubiquitin conjugating enzyme","termid":"PBO:0117157"}


id: GO:0052716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O.","definition_xrefs":["EC:1.10.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroquinone:oxygen oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R00083","RHEA:11276","MetaCyc:LACCASE-RXN"],"synonyms":[{"name":"benzenediol:oxygen oxidoreductase activity","type":"broad"},{"name":"laccase reaction","type":"broad"},{"name":"p-diphenol:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052716"}


id: MONDO:1012596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in humpback whales due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, humpback whale","secondary_identifiers":["OMIA:000202-9773"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Megaptera novaeangliae (humpback whale)","type":"exact"}],"termid":"MONDO:1012596","xrefs":{"Monarch":{"xref_id":"1012596"}}}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: GO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"trehalose metabolic process","termid":"GO:0005991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of trehalose metabolic process","termid":"GO:0090062"}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["UMLS:C5437761","icd11.foundation:1921224131","GARD:21095","MEDGEN:1738105","Orphanet:280840"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: PBO:0065174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 2","termid":"PBO:0065174"}


id: MONDO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent esophageal carcinoma arising from esophageal glands. (WHO)","definition_xrefs":["NCIT:C5342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophageal adenoid cystic carcinoma","secondary_identifiers":["DOID:4878","UMLS:C1333441","MEDGEN:232468"],"synonyms":[{"name":"adenoid cystic carcinoma of esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma, esophagus","type":"exact"},{"name":"adenoid cystic carcinoma, oesophagus","type":"exact"},{"name":"adenoid cystic esophagus carcinoma","type":"exact"},{"name":"adenoid cystic oesophagus carcinoma","type":"exact"},{"name":"esophageal adenoid cystic cancer","type":"exact"},{"name":"esophageal adenoid cystic carcinoma","type":"exact"},{"name":"esophagus adenoid cystic carcinoma","type":"exact"},{"name":"oesophagus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003186","xrefs":{"Monarch":{"xref_id":"0003186"}}}


id: PBO:0086025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; strong increase in transcript abundance during anaerobic growth compared to aerobic growth; cells deleted for YML083C do not exhibit growth defects in anerobic or anaerobic conditions","termid":"PBO:0086025"}


