# terms

id: GO:2000227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"negatively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic A cell differentiation","synonyms":[{"name":"negative regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000227"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: MONDO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphangioleiomyomatosis (obsolete MONDO:0002607)","termid":"MONDO:0002607","xrefs":{"Monarch":{"xref_id":"0002607"}}}


id: MONDO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overactivity of the thyroid gland resulting in overproduction of thyroid hormone and increased metabolic rate. Causes include diffuse hyperplasia of the thyroid gland (Graves' disease), single nodule in the thyroid gland, and thyroiditis. The symptoms are related to the increased metabolic rate and include weight loss, fatigue, heat intolerance, excessive sweating, diarrhea, tachycardia, insomnia, muscle weakness, and tremor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism","secondary_identifiers":["UMLS:C0020550","DOID:7998","EFO:0009189","SCTID:34486009","NANDO:2200329","MESH:D006980","NCIT:C3123","ICD9:242.90","MEDGEN:6972","NANDO:2100119"],"synonyms":[{"name":"overactive thyroid","type":"exact"}],"termid":"MONDO:0004425","xrefs":{"Monarch":{"xref_id":"0004425"}}}


id: PBO:0049087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 142","termid":"PBO:0049087"}


id: PBO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 35 (pseudogene)","termid":"PBO:0045623"}


id: GO:0098503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a 3' phosphate group from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation (obsolete GO:0098503)","termid":"GO:0098503"}


id: GO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, as part of the accumulation of pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigment accumulation","synonyms":[{"name":"pigment metabolic process during pigment accumulation","type":"related"},{"name":"pigment metabolism during pigment accumulation","type":"related"}],"termid":"GO:0043475"}


id: PBO:0057009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-100-let-7a-2-mir-125b-1 cluster host gene","termid":"PBO:0057009"}


id: PBO:0071136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22","termid":"PBO:0071136"}


id: PBO:0113751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain superfamily protein, potential role in central carbon metabolism based on C. neoformans metabolic data, see PF11160","termid":"PBO:0113751"}


id: SO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_one","secondary_identifiers":["BS:00207"],"synonyms":[{"name":"asx turn type right handed type one","type":"exact"},{"name":"asx_turn_ir","type":"exact"}],"termid":"SO:0001132"}


id: GO:0140969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the lungs with respect to the left and right halves of the organism.","definition_xrefs":["PMID:20007846","PMID:21131974","PMID:19944405","GOC:BHFL","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of lung left/right asymmetry","termid":"GO:0140969"}


id: PBO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-17 (pseudogene)","termid":"PBO:0051435"}


id: GO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of 3-phenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenylpropionic acid transmembrane transporter activity (obsolete GO:0042890)","synonyms":[{"name":"3-phenylpropionate acid transporter activity","type":"exact"},{"name":"HCA transporter activity","type":"exact"},{"name":"hydrocinnamic acid transporter activity","type":"exact"}],"termid":"GO:0042890"}


id: GO:0005761
data:
  {"annotated_genes":["SJAG_00944","SJAG_01473","SJAG_00148","SJAG_05221","SJAG_02359","SJAG_04893","SJAG_04753","SJAG_01463","SJAG_02071","SJAG_00086","SJAG_00889","SJAG_04689","SJAG_02201","SJAG_04493","SJAG_02452","SJAG_00860","SJAG_03459","SJAG_00105","SJAG_02836","SJAG_00799","SJAG_01478","SJAG_04244","SJAG_04494","SJAG_02324","SJAG_04788","SJAG_04281","SJAG_01767","SJAG_01719","SJAG_00844","SJAG_02067","SJAG_04918","SJAG_00628","SJAG_03636","SJAG_03040","SJAG_01591","SJAG_04164","SJAG_02643","SJAG_06253","SJAG_04378","SJAG_04019","SJAG_03402","SJAG_04490","SJAG_01303","SJAG_03297","SJAG_03176","SJAG_05573","SJAG_03192","SJAG_01630","SJAG_04207","SJAG_00497","SJAG_01829","SJAG_01045","SJAG_02777","SJAG_05244","SJAG_03065","SJAG_04889","SJAG_03649","SJAG_03584","SJAG_01727","SJAG_00060","SJAG_05218","SJAG_07009","SJAG_04173","SJAG_03053","SJAG_01413","SJAG_04216","SJAG_05320","SJAG_03284","SJAG_06110","SJAG_02762","SJAG_01468","SJAG_01734","SJAG_00513","SJAG_01520","SJAG_00315","SJAG_00782","SJAG_05270"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110788,72323,77211,78374,105721,71064,72779,79260,71979,76572,74622,79615,106768,116179,71694,79824,97952,79146,108190,113465,69432,77986,97973,75364,78083,72933,77799,80381,70667,103686,112737,75636,76545,66872,109854,111113,96576,98646,116288,117948,114614,108091,108241,112238,114732],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[75754,115614,108354,94161,89887,110147,106408,108603,97977,94459,92045,110398,110678,95899,103082,76453,78263,106046,108095,73146,104005,112375,116039,96609,72251,72495,118108,73991,97976,98211,102314,73940],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar ribosome","termid":"GO:0000313"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"55S ribosome, mitochondrial","type":"narrow"}],"termid":"GO:0005761","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0050773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2","termid":"PBO:0050773"}


id: MONDO:0006833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological enlargement of the lingual thyroid, ectopic thyroid tissue at the base of the tongue. It may cause upper airway obstruction; dysphagia; or hypothyroidism symptoms.","definition_xrefs":["MESH:D047268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual goiter","secondary_identifiers":["MEDGEN:75766","ICD9:759.2","SCTID:75667007","UMLS:C0271760","DOID:13196"],"termid":"MONDO:0006833","xrefs":{"Monarch":{"xref_id":"0006833"}}}


id: GO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to CD40, a receptor found on the surface of all B-lymphocytes.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CD40 receptor binding","termid":"GO:0005174"}


id: FYPO:0003653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription elongation from an RNA polymerase III promoter occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PomBase:mah","GO:0006385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription elongation from RNA polymerase III promoter during vegetative growth","synonyms":[{"name":"normal transcription elongation from RNA polymerase III promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003653"}


id: FYPO:0000219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"increased protein oxidation","termid":"FYPO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein oxidation during vegetative growth","synonyms":[{"name":"accumulation of carbonylated proteins during vegetative growth","type":"related"},{"name":"increased level of disulfides during vegetative growth","type":"related"},{"name":"increased level of oxidised thiols in proteins during vegetative growth","type":"related"},{"name":"increased level of oxidized protein thiols during vegetative growth","type":"related"},{"name":"increased protein oxidation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000219"}


id: FYPO:0005475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is normal length but has a larger volume than normal.","definition_xrefs":["PMID:9459302","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000005","FYPO:0001320","FYPO:0000257","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"swollen vegetative cell with normal cell length","synonyms":[{"name":"normal length cell with increased cell volume","type":"exact"},{"name":"swollen cell with normal cell length during vegetative growth","type":"exact"},{"name":"swollen vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"swollen, normal length vegetative cell","type":"exact"}],"termid":"FYPO:0005475"}


id: MONDO:0859173
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86322],"is_not":false,"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794159","OMIM:619464","UMLS:C5561949"],"termid":"MONDO:0859173","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0859173"}}}


id: MONDO:0014925
data:
  {"annotated_genes":["SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87099],"is_not":false,"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18204","UMLS:C4310708","DOID:0081423","MEDGEN:934675","OMIM:617118"],"synonyms":[{"name":"FFEVF3","type":"exact"},{"name":"NPRL3 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3; FFEVF3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 3","type":"exact"}],"termid":"MONDO:0014925","terms_by_termid":{"MONDO:0014925":null},"xrefs":{"Monarch":{"xref_id":"0014925"}}}


id: GO:0033870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + a thiol = adenosine 3',5'-bisphosphate + an S-alkyl thiosulfate.","definition_xrefs":["EC:2.8.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"thiol sulfotransferase activity","secondary_identifiers":["RHEA:14637","MetaCyc:THIOL-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:thiol S-sulfotransferase activity","type":"related"},{"name":"PAPS sulfotransferase activity","type":"broad"},{"name":"adenosine 3'-phosphate 5'-sulphatophosphate sulfotransferase activity","type":"related"}],"termid":"GO:0033870"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: FYECO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which M-factor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ mating pheromone","termid":"FYECO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ M-factor","synonyms":[{"name":"M factor added","type":"exact"}],"termid":"FYECO:0000040"}


id: FYPO:0007777
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119407,119411],"is_not":false,"summary":null,"term":"FYPO:0007777"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form more branched filaments than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"increased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"increased number of branched filaments","type":"exact"}],"termid":"FYPO:0007777","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007777":null,"FYPO_EXT:0000002":null}}


id: FYPO:0005558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule bundle","secondary_identifiers":["FYPO:0005795"],"synonyms":[{"name":"abnormal MT bundle","type":"exact"},{"name":"abnormal microtubule array","type":"related"},{"name":"abnormal microtubule bundle physical object quality","type":"exact"},{"name":"abnormal microtubule bundle structure","type":"narrow"}],"termid":"FYPO:0005558"}


id: FYPO:0001926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to hydroxyurea","synonyms":[{"name":"normal cellular response to HU","type":"exact"},{"name":"normal cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0001926"}


id: PBO:0088273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase/ ubiquitin-protein ligase E3 Irc20","termid":"PBO:0088273"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0065309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 29, pseudogene","termid":"PBO:0065309"}


id: MONDO:0017798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spigelian hernia-cryptorchidism syndrome","secondary_identifiers":["MEDGEN:1662076","Orphanet:314432","UMLS:C4751074","GARD:21371"],"termid":"MONDO:0017798","xrefs":{"Monarch":{"xref_id":"0017798"}}}


id: PBO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3 like matrix AAA peptidase subunit 2","termid":"PBO:0039014"}


id: PBO:0030376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_anisomycin","termid":"PBO:0030376"}


id: MONDO:0035161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"progressive dementia with neuroserpin inclusion bodies","secondary_identifiers":["UMLS:C5680143","ICD10CM:G40.3","GARD:22208","MEDGEN:1842194","Orphanet:530303"],"synonyms":[{"name":"late-onset familial encephalopathy with neuroserpin inclusion bodies","type":"exact"}],"termid":"MONDO:0035161","xrefs":{"Monarch":{"xref_id":"0035161"}}}


id: PBO:0054186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1561","termid":"PBO:0054186"}


id: MONDO:0010213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive genetic disorder caused by mutations in the DDB2 gene. This disease exhibits the mildest degree of sun sensitivity of all xeroderma pigmentosum complementation groups, although individuals are at high risk for skin cancer.","definition_xrefs":["NCIT:C114771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum group E","secondary_identifiers":["SCTID:56048001","MEDGEN:341219","DOID:0110846","MESH:C564732","Orphanet:276261","OMIM:278740","GARD:5627","UMLS:C1848411"],"synonyms":[{"name":"XP group E","type":"exact"},{"name":"XP, Group E","type":"related"},{"name":"XP-E","type":"exact"},{"name":"XP5","type":"exact"},{"name":"XPE","type":"exact"},{"name":"XPe","type":"related"},{"name":"xeroderma pigmentosum 5","type":"related"},{"name":"xeroderma pigmentosum V","type":"exact"},{"name":"xeroderma pigmentosum group E","type":"exact"},{"name":"xeroderma pigmentosum group type E","type":"exact"},{"name":"xeroderma pigmentosum, complementation group E","type":"related"},{"name":"xeroderma pigmentosum, complementation group type E","type":"exact"},{"name":"xeroderma pigmentosum, group E, DDB-negative subtype","type":"exact"},{"name":"xeroderma pigmentosum, type 5","type":"related"}],"termid":"MONDO:0010213","xrefs":{"Monarch":{"xref_id":"0010213"}}}


id: PBO:0043684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactosin like F-actin binding protein 1","termid":"PBO:0043684"}


id: PBO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase","termid":"PBO:0090425"}


id: PBO:0089825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA dimethylase Cdh1","termid":"PBO:0089825"}


id: PBO:0053605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 638","termid":"PBO:0053605"}


id: PBO:0089389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c''","termid":"PBO:0089389"}


id: PBO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Z member 1","termid":"PBO:0062062"}


id: GO:0030541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasmids are segregated or distributed into daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid maintenance","termid":"GO:0006276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid partitioning","secondary_identifiers":["GO:0030542"],"termid":"GO:0030541"}


id: PBO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 25","termid":"PBO:0060037"}


id: GO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome maturation","termid":"GO:0090382"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}


id: MONDO:0011595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 7","secondary_identifiers":["MEDGEN:1803839","GARD:9761","MESH:C538333","DOID:0080085","OMIM:605779","UMLS:C5574953","Orphanet:79144","SCTID:403281007"],"synonyms":[{"name":"COIF","type":"exact"},{"name":"COIF syndrome","type":"exact"},{"name":"Iso-Kikuchi syndrome","type":"exact"},{"name":"NDNC7","type":"related"},{"name":"congenital isolated nail dysplasia","type":"related"},{"name":"congenital onychodysplasia of the index fingers","type":"exact"},{"name":"isolated congenital nail dysplasia","type":"related"},{"name":"isolated congenital onychodysplasia","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 7","type":"related"},{"name":"nail dysplasia, isolated congenital","type":"related"},{"name":"nonsyndromic congenital nail disorder type 7","type":"exact"},{"name":"onychodysplasia, isolated congenital","type":"related"}],"termid":"MONDO:0011595","xrefs":{"Monarch":{"xref_id":"0011595"}}}


id: PBO:0086276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL1 has a paralog, SOL2, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0086276"}


id: PBO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0036067"}


id: GO:0045145
data:
  {"annotated_genes":["SJAG_05280","SJAG_01648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72457,97117],"is_not":false,"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of nucleotides (such as mononucleotides or dinucleotides) from a free 5' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:ai","GOC:elh","PMID:20086101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0004527","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"single-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.4"],"synonyms":[{"name":"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0045145","terms_by_termid":{"GO:0045145":null}}


id: GO:0051981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a copper chelate from one side of a membrane to the other. A copper chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:26512647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"copper chelate transmembrane transporter activity","termid":"GO:0051981"}


id: FYPO:0003436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G2 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003436"}


id: GO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:tb","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"negatively_regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerulus development","termid":"GO:0090194"}


id: PBO:0026966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vegetative_cell_population_growth_during_phosphate_starvation","termid":"PBO:0026966"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0060436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 5","termid":"PBO:0060436"}


id: MONDO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and ectodermal dysplasia","secondary_identifiers":["OMIM:617364","UMLS:C4479250","MEDGEN:1387409"],"synonyms":[{"name":"CHDED","type":"related"},{"name":"congenital heart defects and ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0044303","xrefs":{"Monarch":{"xref_id":"0044303"}}}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: PBO:0056576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherule protein 1","termid":"PBO:0056576"}


id: MONDO:0021370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of minor salivary gland","secondary_identifiers":["SCTID:126798006","MEDGEN:138022","UMLS:C0345613","NCIT:C4409"],"synonyms":[{"name":"minor salivary gland neoplasm","type":"exact"},{"name":"minor salivary gland neoplasm (disease)","type":"exact"},{"name":"minor salivary gland tumor","type":"exact"},{"name":"minor salivary gland tumour","type":"exact"},{"name":"neoplasm of minor salivary gland","type":"exact"},{"name":"neoplasm of the minor salivary gland","type":"exact"},{"name":"tumor of minor salivary gland","type":"exact"},{"name":"tumor of the minor salivary gland","type":"exact"},{"name":"tumour of minor salivary gland","type":"exact"},{"name":"tumour of the minor salivary gland","type":"exact"}],"termid":"MONDO:0021370","xrefs":{"Monarch":{"xref_id":"0021370"}}}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: GO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior colliculus development","termid":"GO:0061380"}


id: MONDO:0017782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome characterized by mild to severe global developmental delay, intellectual disability and behavioral abnormalities, hypotonia, strabismus, optic nerve hypoplasia and mild facial dysmorphic features (down slanting palpebral fissures, frontal bossing, crowded teeth, auricular abnormalities and prominent philtral ridges). Other associated clinical features may include seizures and skeletal anomalies (kyphosis/scoliosis, pectus deformities).","definition_xrefs":["Orphanet:313892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental and speech delay due to SOX5 deficiency","secondary_identifiers":["MEDGEN:1660895","UMLS:C4749915","GARD:17415"],"termid":"MONDO:0017782","xrefs":{"Monarch":{"xref_id":"0017782"}}}


id: PBO:0079479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin alpha","termid":"PBO:0079479"}


id: PBO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 43","termid":"PBO:0070813"}


id: GO:0050578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfolactate + NAD(P)+ = 3-sulfopyruvate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.272","MetaCyc:1.1.1.272-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-2-hydroxyacid dehydrogenase activity","secondary_identifiers":["RHEA:35735"],"synonyms":[{"name":"(R)-2-hydroxyacid:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"(R)-sulfolactate:NAD(P)(+) oxidoreductase activity","type":"related"},{"name":"(R)-sulfolactate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"L-sulfolactate dehydrogenase activity","type":"related"}],"termid":"GO:0050578"}


id: GO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A virus-specific protein complex that possesses RNA-dependent RNA polymerase activity and replicates the genome of an RNA virus.","definition_xrefs":["PMID:15613301","GOC:mah","PMID:15574411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral RNA-directed RNA polymerase complex","termid":"GO:0031381"}


id: PBO:0038363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_ameliorated_by","termid":"PBO:0038363"}


id: GO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart induction (obsolete GO:0003130)","synonyms":[{"name":"BMP signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003130"}


id: MONDO:0016021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early infantile epileptic encephalopathy (obsolete MONDO:0016021)","synonyms":[{"name":"obsolete early infantile epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0016021","xrefs":{"Monarch":{"xref_id":"0016021"}}}


id: GO:2000720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000720"}


id: PBO:0039765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin","termid":"PBO:0039765"}


id: PBO:0062612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily U member 1 pseudogene","termid":"PBO:0062612"}


id: MONDO:0012005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth failure, microcephaly, intellectual disability, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","secondary_identifiers":["MEDGEN:330820","MESH:C564264","OMIM:608278","UMLS:C1842321"],"synonyms":[{"name":"growth failure, microcephaly, intellectual disability, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","type":"exact"},{"name":"growth failure, microcephaly, mental retardation, cataracts, large joint contractures, osteoporosis, cortical dysplasia, and cerebellar atrophy","type":"exact"}],"termid":"MONDO:0012005","xrefs":{"Monarch":{"xref_id":"0012005"}}}


id: MONDO:0014201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 18","secondary_identifiers":["OMIM:615476","DOID:0080413","MEDGEN:815954","UMLS:C3809624","GARD:13676","Orphanet:369894"],"synonyms":[{"name":"DEE18","type":"exact"},{"name":"EIEE18","type":"exact"},{"name":"developmental and epileptic encephalopathy 18","type":"exact"},{"name":"early infantile epileptic encephalopathy without suppression burst","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 18","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 18","type":"exact"}],"termid":"MONDO:0014201","xrefs":{"Monarch":{"xref_id":"0014201"}}}


id: PBO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 19","termid":"PBO:0060072"}


id: GO:0042077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of peptidyl-serine through a phosphoester bond forming, for example, GlcNAc-alpha-1-P-Ser residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphate-linked glycosylation","termid":"GO:0042076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein phosphate-linked glycosylation via serine","synonyms":[{"name":"protein amino acid phosphate-linked glycosylation via serine","type":"exact"}],"termid":"GO:0042077"}


id: PBO:0049091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 148","termid":"PBO:0049091"}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: MONDO:0019202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant fibroblastic neoplasm arising from the soft tissue. It is characterized by the presence of spindle-shaped cells, cellular pleomorphism, thin-walled blood vessels, fibrous septa, and myxoid stroma.","definition_xrefs":["NCIT:C6496"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular tumor (obsolete MONDO:0016123)","termid":"MONDO:0016123"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxofibrosarcoma","secondary_identifiers":["Orphanet:79105","SCTID:253042009","MEDGEN:811359","GARD:18941","DOID:0080534","ICDO:8811/3","ONCOTREE:MFS","UMLS:C3714524","MedDRA:10066948","icd11.foundation:405689402"],"synonyms":[{"name":"MFS","type":"related"},{"name":"fibromyxosarcoma","type":"exact"},{"name":"myxofibrosarcoma","type":"exact"},{"name":"myxoid MFH","type":"exact"},{"name":"myxoid fibrous histiocytoma","type":"exact"},{"name":"myxoid malignant fibrous histiocytoma","type":"exact"}],"termid":"MONDO:0019202","xrefs":{"Monarch":{"xref_id":"0019202"}}}


id: PBO:0073776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 9","termid":"PBO:0073776"}


id: PBO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 6","termid":"PBO:0050708"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: GO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).","definition_xrefs":["PMID:14985752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloride:proton antiporter activity","termid":"GO:0062158"}


id: PBO:0039491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A14, pseudogene","termid":"PBO:0039491"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: GO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum secundum is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"septum secundum development","termid":"GO:0003285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum secundum morphogenesis","termid":"GO:0003290"}


id: GO:0006971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12598593","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic response","synonyms":[{"name":"hypo-osmotic response","type":"exact"}],"termid":"GO:0006971"}


id: PBO:0029205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_activation_of_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0029205"}


id: PBO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 8","termid":"PBO:0070473"}


id: PBO:0113261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein of unknown function; last 10 C-terminal amino acids contains a novel PTS1 motif, both necessary and sufficient for Pex5p-dependent peroxisomal targeting; also localizes to the nucleus; PXP3 is not an essential gene","termid":"PBO:0113261"}


id: PBO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor","termid":"PBO:0060875"}


id: PBO:0078113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 2","termid":"PBO:0078113"}


id: PBO:0081329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 124","termid":"PBO:0081329"}


id: PATO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acceleration","termid":"PATO:0001028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular acceleration","termid":"PATO:0001350"}


id: GO:0031106
data:
  {"annotated_genes":["SJAG_00514","SJAG_02683","SJAG_00663","SJAG_01143","SJAG_00118","SJAG_04375","SJAG_01658"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70048,97810,101772,117061],"is_not":false,"summary":null,"term":"GO:0031106"},{"annotations":[72238,103923,100116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"}]},"cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of the septin ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton organization","termid":"GO:0032185"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_01143":null,"SJAG_01658":null,"SJAG_02683":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin ring organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"septin ring organisation","type":"exact"}],"termid":"GO:0031106","terms_by_termid":{"GO:0000921":null,"GO:0031106":null}}


id: GO:0006556
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75052],"is_not":false,"summary":null,"term":"GO:0006556"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SAM-PWY"],"synonyms":[{"name":"S-adenosyl methionine biosynthesis","type":"exact"},{"name":"S-adenosyl methionine biosynthetic process","type":"exact"},{"name":"S-adenosylmethionine anabolism","type":"exact"},{"name":"S-adenosylmethionine biosynthesis","type":"exact"},{"name":"S-adenosylmethionine formation","type":"exact"},{"name":"S-adenosylmethionine synthesis","type":"exact"},{"name":"SAM biosynthetic process","type":"exact"}],"termid":"GO:0006556","terms_by_termid":{"GO:0006556":null}}


id: MONDO:0957308
data:
  {"annotated_genes":["SJAG_01857"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86298],"is_not":false,"summary":null,"term":"MONDO:0957308"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01857":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 90A, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070459","OMIM:620416","UMLS:C5830574","MEDGEN:1841210"],"termid":"MONDO:0957308","terms_by_termid":{"MONDO:0957308":null},"xrefs":{"Monarch":{"xref_id":"0957308"}}}


id: MONDO:0011328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1E (obsolete MONDO:0011328)","termid":"MONDO:0011328","xrefs":{"Monarch":{"xref_id":"0011328"}}}


id: PBO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase C, Css1","termid":"PBO:0004202"}


id: MONDO:0008812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AREDYLD stands for acral-renal-ectodermal-dysplasia-lipoatrophic-diabetes. This syndrome has been described in three individuals, one of whom was born to consanguineous parents. All patients had lipoatrophy, diabetes mellitus, generalized hypotrichosis, ectodermal dysplasia, renal alterations, dental abnormalities and other manifestations. It is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"AREDYLD syndrome","secondary_identifiers":["MEDGEN:87435","UMLS:C0342280","OMIM:207780","GARD:8509","SCTID:237610008","icd11.foundation:2007371732","MESH:C537427","ICD9:753.3"],"synonyms":[{"name":"AREDYLD","type":"related"},{"name":"acral renal ectodermal dysplasia lipoatrophic diabetes","type":"related"},{"name":"acrorenal Field defect, ectodermal dysplasia, and lipoatrophic diabetes","type":"related"},{"name":"acrorenal defect-ectodermal dysplasia-diabetes syndrome","type":"exact"}],"termid":"MONDO:0008812","xrefs":{"Monarch":{"xref_id":"0008812"}}}


id: MONDO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial bent bone dysplasia syndrome","termid":"MONDO:0031615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia syndrome 1","secondary_identifiers":["OMIM:614592","GARD:10965","Orphanet:313855","UMLS:C3281247","MEDGEN:482877"],"synonyms":[{"name":"BBDS","type":"related"},{"name":"FGFR2-related bent bone dysplasia","type":"exact"},{"name":"bent bone dysplasia (BBD)-FGFR2 type","type":"related"},{"name":"bent bone dysplasia syndrome","type":"related"},{"name":"perinatal lethal bent bone dysplasia","type":"exact"}],"termid":"MONDO:0013815","xrefs":{"Monarch":{"xref_id":"0013815"}}}


id: MONDO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 62 is a pure or complex form of hereditary spastic paraplegia characterized by an onset in the first decade of life of spastic paraperesis (more prominent in lower than upper extremities) and unsteady gait, as well as increased deep tendon reflexes, amyotrophy, cerebellar ataxia, and flexion contractures of the knees, in some.","definition_xrefs":["Orphanet:401785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 62","secondary_identifiers":["SCTID:765045003","UMLS:C4284588","DOID:0110813","OMIM:615681","MEDGEN:924879","GARD:17657"],"synonyms":[{"name":"ERLIN1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG62","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in ERLIN1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 62","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 62","type":"exact"},{"name":"hereditary spastic paraplegia type 62","type":"exact"},{"name":"spastic paraplegia 62, autosomal recessive","type":"exact"}],"termid":"MONDO:0014302","xrefs":{"Monarch":{"xref_id":"0014302"}}}


id: PBO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF185 protein, mitochondrial","termid":"PBO:0001339"}


id: GO:0019424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sulfide oxidation process that proceeds via the reaction catalyzed by siroheme sulfite reductase.","definition_xrefs":["MetaCyc:P223-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfide oxidation, using siroheme sulfite reductase (obsolete GO:0019424)","synonyms":[{"name":"sulfide oxidation, using sirohaem sulfite reductase","type":"exact"},{"name":"sulfur oxidation, using sirohaem sulfite reductase","type":"related"},{"name":"sulfur oxidation, using siroheme sulfite reductase","type":"related"},{"name":"sulphide oxidation, using siroheme sulphite reductase","type":"exact"},{"name":"sulphur oxidation, using siroheme sulphite reductase","type":"related"}],"termid":"GO:0019424"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["Wikipedia:Alkane","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0041422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 34","termid":"PBO:0041422"}


id: MONDO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunologic deficiency state characterized by selective deficiencies of one or more, but not all, classes of immunoglobulins.","definition_xrefs":["MESH:D004406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selective immunoglobulin deficiency disease","termid":"MONDO:0003739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"dysgammaglobulinemia","secondary_identifiers":["SCTID:123782009","UMLS:C0013374","DOID:11702","MEDGEN:41679","HP:0002961"],"synonyms":[{"name":"dysgammaglobulinemia","type":"exact"},{"name":"dysgammaglobulinemia (disease)","type":"exact"},{"name":"dysgammaglobulinemia (finding)","type":"exact"}],"termid":"MONDO:0001342","xrefs":{"Monarch":{"xref_id":"0001342"}}}


id: PBO:0079806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B27, pseudogene","termid":"PBO:0079806"}


id: MONDO:0011693
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87310],"is_not":false,"summary":null,"term":"MONDO:0011693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"is_obsolete":false,"name":"glaucoma, normal tension, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:606657","MEDGEN:335756","UMLS:C1847730"],"synonyms":[{"name":"NTG","type":"related"},{"name":"glaucoma, normal pressure, susceptibility to","type":"related"},{"name":"glaucoma, normal tension, susceptibility to","type":"exact"}],"termid":"MONDO:0011693","terms_by_termid":{"MONDO:0011693":null},"xrefs":{"Monarch":{"xref_id":"0011693"}}}


id: GO:1904182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000059","PMID:25525879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate dehydrogenase activity","synonyms":[{"name":"regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904182"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GO_REF:0000058","PMID:19737525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: PBO:0053274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B1","termid":"PBO:0053274"}


id: PBO:0059200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X7, pseudogene","termid":"PBO:0059200"}


id: GO:0016856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a hydroxy acid molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","secondary_identifiers":["EC:5.1.2.-"],"termid":"GO:0016856"}


id: MONDO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensorineural hearing loss which develops suddenly over a period of hours or a few days. It varies in severity from mild to total deafness. Sudden deafness can be due to head trauma, vascular diseases, infections, or can appear without obvious cause or warning.","definition_xrefs":["MESH:D003639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden hearing loss disorder","termid":"MONDO:0020677"},{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden sensorineural hearing loss","secondary_identifiers":["Orphanet:90059","SCTID:715239002","UMLS:C4275242","GARD:12927","MEDGEN:907022"],"synonyms":[{"name":"acute sensorineural hearing loss by acute acoustic trauma or sudden deafness or surgery induced acoustic trauma","type":"related"},{"name":"deafness, sudden","type":"related"},{"name":"sudden deafness","type":"related"},{"name":"sudden hearing loss","type":"broad"},{"name":"sudden sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0043373","xrefs":{"Monarch":{"xref_id":"0043373"}}}


id: GO:0048322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an axial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"axial mesodermal cell differentiation","termid":"GO:0048321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate commitment","synonyms":[{"name":"axial mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0048322"}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_02703","SJAG_03302","SJAG_01585","SJAG_01657","SJAG_00552","SJAG_04151"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64870,70984,88939,108014,112830,116415],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["PMID:21504829","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: MONDO:0016501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hermansky-Pudlak syndrome with pulmonary fibrosis as a complication includes two types (HPS-1 and HPS-4) of Hermansky-Pudlak syndrome (HPS), a multi-system disorder characterized by oculocutaneous albinism, bleeding diathesis and, in some cases, pulmonary fibrosis or granulomatous colitis.","definition_xrefs":["Orphanet:231500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome with pulmonary fibrosis","secondary_identifiers":["MEDGEN:1843223","ICD10CM:E70.3","UMLS:C5679834","icd11.foundation:1086187623","GARD:17168"],"synonyms":[{"name":"HPS with pulmonary fibrosis","type":"exact"}],"termid":"MONDO:0016501","xrefs":{"Monarch":{"xref_id":"0016501"}}}


id: MONDO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to peanuts that is triggered by the immune system.","definition_xrefs":["MESH:D021183"],"gene_count":0,"genotype_count":0,"name":"obsolete peanut allergic reaction (obsolete MONDO:0005902)","secondary_identifiers":["DOID:4378","ICD9:995.3","SCTID:91935009"],"synonyms":[{"name":"allergy to peanuts","type":"exact"},{"name":"nut allergic reaction of pigmented ciliary epithelial cell","type":"exact"},{"name":"peanut allergic reaction","type":"exact"},{"name":"peanut allergy","type":"related"},{"name":"pigmented ciliary epithelial cell nut allergic reaction","type":"exact"}],"termid":"MONDO:0005902","xrefs":{"Monarch":{"xref_id":"0005902"}}}


id: PBO:0110468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain 40 molecular ruler complex subunit","termid":"PBO:0110468"}


id: PR:Q1MTR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.11c gene.","definition_xrefs":["UniProtKB:Q1MTR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent helicase irc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.11c","synonyms":[{"name":"Spom972h-SPBC11C11.11c","type":"exact"}],"termid":"PR:Q1MTR1"}


id: SO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature_attribute describing a feature that is not manifest under normal conditions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic","termid":"SO:0000976"}


id: PBO:0081581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 510","termid":"PBO:0081581"}


id: GO:0160105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(22) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(22) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0140101","GO:0003674","GO:0140098","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine(22)-N1)-methyltransferase activity","secondary_identifiers":["RHEA:43144"],"synonyms":[{"name":"tRNA (adenine(22)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(22)-N(1))-methyltransferase activity","type":"exact"}],"termid":"GO:0160105"}


id: GO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"positively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil differentiation","synonyms":[{"name":"activation of neutrophil differentiation","type":"narrow"},{"name":"stimulation of neutrophil differentiation","type":"narrow"},{"name":"up regulation of neutrophil differentiation","type":"exact"},{"name":"up-regulation of neutrophil differentiation","type":"exact"},{"name":"upregulation of neutrophil differentiation","type":"exact"}],"termid":"GO:0045660"}


id: FYPO:0005890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005890"}


id: PBO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ5","termid":"PBO:0036506"}


id: MONDO:0032679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 37","secondary_identifiers":["DOID:0111499","UMLS:C5193031","MEDGEN:1675208","OMIM:618329"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 37","type":"related"},{"name":"COXPD37","type":"related"}],"termid":"MONDO:0032679","xrefs":{"Monarch":{"xref_id":"0032679"}}}


id: PBO:0040024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 12","termid":"PBO:0040024"}


id: PBO:0082948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic malate dehydrogenase; one of three isozymes that catalyze interconversion of malate and oxaloacetate; involved in the glyoxylate cycle and gluconeogenesis during growth on two-carbon compounds; interacts with Pck1p and Fbp1; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0082948"}


id: PBO:0065448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 5","termid":"PBO:0065448"}


id: FYPO:0007648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abnormal.","definition_xrefs":["PomBase:mah","GO:1902682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to pericentric heterochromatin","synonyms":[{"name":"abnormal protein localization to centromeric heterochromatin","type":"exact"},{"name":"abnormal protein localization to nuclear centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0007648"}


id: FYPO:0006408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular nitric oxide level","synonyms":[{"name":"abnormal cellular nitric oxide accumulation","type":"related"},{"name":"abnormal cellular nitric oxide level","type":"exact"},{"name":"altered cellular NO level","type":"exact"}],"termid":"FYPO:0006408"}


id: PBO:0086870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative spore wall protein; expression increases during sporulation; not an essential gene; YOR214C has a paralog, SPO19, that arose from the whole genome duplication","termid":"PBO:0086870"}


id: MONDO:0019001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biotin-responsive basal ganglia disease (obsolete MONDO:0019001)","termid":"MONDO:0019001","xrefs":{"Monarch":{"xref_id":"0019001"}}}


id: PBO:0066450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 2, pseudogene","termid":"PBO:0066450"}


id: MONDO:0015891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropic hypogonadism associated with other endocrinopathies (obsolete MONDO:0015891)","secondary_identifiers":["Orphanet:181390"],"termid":"MONDO:0015891","xrefs":{"Monarch":{"xref_id":"0015891"}}}


id: GO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by ER stress","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0060734"}


id: MONDO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin C - beta-thalassemia (HbC - BT) is a form of beta-thalassemia resulting in moderate hemolytic anemia.","definition_xrefs":["Orphanet:231242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin C-beta-thalassemia syndrome","secondary_identifiers":["UMLS:C0221020","MEDGEN:526128","GARD:20608"],"synonyms":[{"name":"C-beta-thalassemia","type":"exact"},{"name":"HBC-beta-thalassemia syndrome","type":"exact"}],"termid":"MONDO:0016490","xrefs":{"Monarch":{"xref_id":"0016490"}}}


id: PBO:0074542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal nuclease and tudor domain containing 1","termid":"PBO:0074542"}


id: GO:0005048
data:
  {"annotated_genes":["SJAG_03781","SJAG_01488","SJAG_02208","SJAG_03684","SJAG_01759","SJAG_01640","SJAG_03662","SJAG_01013","SJAG_01909","SJAG_03959","SJAG_04996","SJAG_01282","SJAG_02330","SJAG_03358","SJAG_00962","SJAG_04411","SJAG_00840","SJAG_00702","SJAG_02418","SJAG_03729","SJAG_02998","SJAG_03299","SJAG_00326","SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73117,73430,116670],"is_not":false,"summary":null,"term":"GO:0005048"},{"annotations":[56955,75358,59930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030942"},{"annotations":[113650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045015"},{"annotations":[73893,73402,79082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030943"},{"annotations":[73638,93960,77825,96102,76288,75405,72634,78676,74689,73516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008139"},{"annotations":[73722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005052"},{"annotations":[70614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005053"},{"annotations":[90391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033328"},{"annotations":[104068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010209"}]},"cv_name":"molecular_function","definition":"Binding to a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01282":null,"SJAG_01488":null,"SJAG_01640":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_01909":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02418":null,"SJAG_02998":null,"SJAG_03299":null,"SJAG_03358":null,"SJAG_03662":null,"SJAG_03684":null,"SJAG_03729":null,"SJAG_03781":null,"SJAG_03959":null,"SJAG_04411":null,"SJAG_04996":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"signal sequence binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008249"],"synonyms":[{"name":"leader sequence binding","type":"narrow"},{"name":"protein signal sequence binding","type":"narrow"},{"name":"signal sequence receptor","type":"narrow"}],"termid":"GO:0005048","terms_by_termid":{"GO:0005048":null,"GO:0005052":null,"GO:0005053":null,"GO:0008139":null,"GO:0010209":null,"GO:0030942":null,"GO:0030943":null,"GO:0033328":null,"GO:0045015":null}}


id: MONDO:0008005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiospondylocarpofacial syndrome is characterized by mitral insufficiency, conductive deafness, short stature, and skeletal anomalies (bony fusion involving the cervical vertebrae, the ossicles, and the carpal and tarsal bones). It has been described in three members of one family. The mode of inheritance is likely to be autosomal dominant with incomplete penetrance.","definition_xrefs":["Orphanet:3238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiospondylocarpofacial syndrome","secondary_identifiers":["MEDGEN:444060","MESH:C563572","OMIM:157800","NCIT:C188216","UMLS:C2931461","GARD:2362","SCTID:720612000"],"synonyms":[{"name":"CSCF","type":"related"},{"name":"Forney Robinson Pascoe syndrome","type":"related"},{"name":"Forney syndrome","type":"exact"},{"name":"Forney-Robinson-Pascoe syndrome","type":"exact"},{"name":"cardiospondylocarpofacial syndrome","type":"exact"},{"name":"congenital heart disease, deafness, and skeletal malformations","type":"related"},{"name":"mitral regurgitation, conductive deafness, and fusion of cervical vertebrae and of carpal and tarsal bones","type":"related"},{"name":"mitral regurgitation-deafness-skeletal anomalies syndrome","type":"exact"}],"termid":"MONDO:0008005","xrefs":{"Monarch":{"xref_id":"0008005"}}}


id: PBO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 2","termid":"PBO:0044561"}


id: GO:0033187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate, and ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["PMID:17412959","PMID:17412958"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate 4-kinase or 6-kinase activity (obsolete GO:0033187)","synonyms":[{"name":"inositol hexakisphosphate 4-kinase or 6-kinase activity","type":"exact"}],"termid":"GO:0033187"}


id: MONDO:0007977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dysplasia Kantaputra type (MDK) is a rare skeletal disease characterized by symmetric shortening of the middle segments of limbs and short stature.","definition_xrefs":["Orphanet:1836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia, Kantaputra type","secondary_identifiers":["MEDGEN:331880","GARD:3074","SCTID:719397009","OMIM:156232","UMLS:C1835009","MESH:C535547"],"synonyms":[{"name":"Kantaputra mesomelic dysplasia","type":"exact"},{"name":"MDK","type":"exact"},{"name":"MMDK","type":"related"},{"name":"Mdk","type":"related"},{"name":"mesomelic dysplasia Kantaputra type","type":"related"},{"name":"mesomelic dysplasia Thai type","type":"related"},{"name":"mesomelic dysplasia with ankle carpal and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia with ankle, carpal, and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia, Kantaputra type","type":"exact"},{"name":"mesomelic dysplasia, Thai type","type":"exact"}],"termid":"MONDO:0007977","xrefs":{"Monarch":{"xref_id":"0007977"}}}


id: PBO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0017590"}


id: MONDO:0030702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of atherosclerosis.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune atherosclerosis","secondary_identifiers":["DOID:0040096"],"termid":"MONDO:0030702","xrefs":{"Monarch":{"xref_id":"0030702"}}}


id: GO:0035049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group to juvenile hormone acid.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone acid methyltransferase activity (obsolete GO:0035049)","termid":"GO:0035049"}


id: GO:0097140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BIM-BCL-xl complex","termid":"GO:0097140"}


id: PBO:0080772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 4","termid":"PBO:0080772"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:19380421","PMID:21689171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: GO:0042551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron maturation","termid":"GO:0042551"}


id: GO:0070236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activation-induced cell death of T cells.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activation-induced cell death of T cells","termid":"GO:0070235"},{"relation_name":"negatively_regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation-induced cell death of T cells","synonyms":[{"name":"down regulation of activation-induced cell death of T cells","type":"exact"},{"name":"down-regulation of activation-induced cell death of T cells","type":"exact"},{"name":"downregulation of activation-induced cell death of T cells","type":"exact"},{"name":"inhibition of activation-induced cell death of T cells","type":"narrow"},{"name":"negative regulation of AICD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"negative regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"negative regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"negative regulation of antigen-driven apoptosis","type":"broad"}],"termid":"GO:0070236"}


id: PBO:0076418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 1","termid":"PBO:0076418"}


id: MONDO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, ataxia, short stature, and intellectual disability","secondary_identifiers":["OMIM:300619","UMLS:C1845094","MESH:C535345","MEDGEN:375579"],"synonyms":[{"name":"Casm syndrome","type":"related"},{"name":"cataract, ataxia, short stature, and intellectual disability","type":"exact"},{"name":"cataract, ataxia, short stature, and mental retardation","type":"exact"},{"name":"cataracts, ataxia, short stature, and intellectual disability","type":"related"},{"name":"cataracts, ataxia, short stature, and mental retardation","type":"related"}],"termid":"MONDO:0010380","xrefs":{"Monarch":{"xref_id":"0010380"}}}


id: FYPO:0004856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,6-beta-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal endo-1,6-beta-glucosidase activity","synonyms":[{"name":"abnormal glucan endo-1,6-beta-glucosidase activity","type":"exact"}],"termid":"FYPO:0004856"}


id: GO:0031344
data:
  {"annotated_genes":["SJAG_02379","SJAG_03453","SJAG_00514","SJAG_04509","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93448,89824,90811,87849,111381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection organisation","type":"exact"},{"name":"regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031344","terms_by_termid":{"GO:1902917":null}}


id: GO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type I pneumocyte. A type I pneumocyte is a flattened cell with greatly attenuated cytoplasm and a paucity of organelles.","definition_xrefs":["GOC:mtg_lung","ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I pneumocyte differentiation","synonyms":[{"name":"membranous pneumocyte differentiation","type":"exact"},{"name":"small alveolar cell differentiation","type":"related"},{"name":"squamous alveolar cell differentiation","type":"related"}],"termid":"GO:0060509"}


id: MOD:00362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-arginine residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["RESID:AA0357","PubMed:14704425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-arginine residue","termid":"MOD:02076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-arginyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(N(eta1)-arginyl-S-cysteinyliron)(bis-S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-arginyl diiron disulfide","type":"exact"}],"termid":"MOD:00362"}


id: MONDO:0800486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect the bones secondary to increased levels of minerals or deficient levels of minerals such as calcium, magnesium, phosphorus, and vitamin D. Representative examples are osteomalacia, osteoporosis, and Paget disease.","definition_xrefs":["NCIT:C97045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic bone disorder","secondary_identifiers":["UMLS:C0005944","MEDGEN:2699"],"termid":"MONDO:0800486","xrefs":{"Monarch":{"xref_id":"0800486"}}}


id: MONDO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the vagina and is characterized by a tubulovillous architectural pattern.","definition_xrefs":["NCIT:C40258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal adenoma","termid":"MONDO:0003434"},{"relation_name":"is_a","term_name":"tubulovillous adenoma","termid":"MONDO:0024661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal tubulovillous adenoma","secondary_identifiers":["DOID:8104","MEDGEN:275576","UMLS:C1519933"],"synonyms":[{"name":"vaginal tubulovillous adenoma","type":"exact"}],"termid":"MONDO:0004461","xrefs":{"Monarch":{"xref_id":"0004461"}}}


id: PBO:0079694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 2","termid":"PBO:0079694"}


id: PBO:0068144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 451","termid":"PBO:0068144"}


id: GO:0043799
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114775],"is_not":false,"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799","terms_by_termid":{"GO:0043799":null}}


id: GO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of male germ-line stem cells.","definition_xrefs":["GOC:sart","PMID:21752937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell population maintenance","termid":"GO:0036098"}


id: PBO:0013835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15 (predicted)","termid":"PBO:0013835"}


id: PBO:0082798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic","termid":"PBO:0082798"}


id: GO:0047960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + NAD+ = glyoxylate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.10","MetaCyc:GLYCINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycine dehydrogenase activity","secondary_identifiers":["RHEA:15721"],"synonyms":[{"name":"glycine:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047960"}


id: GO:0008613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a diuretic hormone, a peptide hormone that, upon receptor binding, regulates water balance and fluid secretion.","definition_xrefs":["PMID:8618894","GOC:mah","InterPro:IPR003621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0140677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diuretic hormone activity","termid":"GO:0008613"}


id: PBO:0055809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 4","termid":"PBO:0055809"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: PBO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 1 pseudogene","termid":"PBO:0062180"}


id: PBO:0062896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2","termid":"PBO:0062896"}


id: SO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene by inversion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_inverted_gene","synonyms":[{"name":"recombinationally inverted gene","type":"exact"}],"termid":"SO:0000373"}


id: GO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leukotriene receptor binding","synonyms":[{"name":"leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031774"}


id: PBO:0079180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 9","termid":"PBO:0079180"}


id: MONDO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 4","secondary_identifiers":["DOID:0060836","MESH:C567757","OMIM:613094","UMLS:C2751307","MEDGEN:414346"],"synonyms":[{"name":"GDF6 isolated microphthalmia","type":"exact"},{"name":"MCOP4","type":"exact"},{"name":"isolated microphthalmia caused by mutation in GDF6","type":"exact"},{"name":"isolated microphthalmia type 4","type":"exact"},{"name":"microphthalmia, isolated 4","type":"related"},{"name":"microphthalmia, isolated type 4","type":"exact"}],"termid":"MONDO:0013130","xrefs":{"Monarch":{"xref_id":"0013130"}}}


id: GO:0018673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 NADPH + 2 H+ + O2 = 2-amino-5-oxocyclohex-1-enecarboxyl-CoA + H2O + 2 NADP+.","definition_xrefs":["EC:1.14.13.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anthraniloyl-CoA monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0568","MetaCyc:ANTHRANILOYL-COA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"2-aminobenzoyl-CoA monooxygenase/reductase activity","type":"related"},{"name":"2-aminobenzoyl-CoA,NAD(P)H:oxygen oxidoreductase (de-aromatizing)","type":"related"},{"name":"anthraniloyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0018673"}


id: GO:0102232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acrolein + NADPH + H+ = propanal + NADP.","definition_xrefs":["GOC:pz","PMID:21169366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acrolein reductase activity","secondary_identifiers":["MetaCyc:RXN-12281"],"termid":"GO:0102232"}


id: MONDO:0009485
data:
  {"annotated_genes":["SJAG_04429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85030],"is_not":false,"summary":null,"term":"MONDO:0009485"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04429":null},"genotype_count":0,"is_obsolete":false,"name":"oculocerebrofacial syndrome, Kaufman type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:343403","MESH:C537013","OMIM:244450","SCTID:722056009","GARD:3084","Orphanet:2707","UMLS:C1855663","DOID:0111456"],"synonyms":[{"name":"BPIDS","type":"exact"},{"name":"KOS","type":"related"},{"name":"Kaufman oculocerebrofacial syndrome","type":"related"},{"name":"blepharophimosis-ptosis-intellectual disability syndrome","type":"exact"},{"name":"kos","type":"related"},{"name":"oculocerebrofacial syndrome, Kaufman type","type":"exact"},{"name":"severe intellectual disability, microcephaly, long narrow face, ocular anomalies, and long thin hands and feet","type":"related"},{"name":"severe mental retardation, microcephaly, long narrow face, ocular anomalies, and long thin hands and feet","type":"related"}],"termid":"MONDO:0009485","terms_by_termid":{"MONDO:0009485":null},"xrefs":{"Monarch":{"xref_id":"0009485"}}}


id: GO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA = a pseudouridine in rRNA. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:28432181","RHEA:54568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}


id: MONDO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma composed of immature small to medium-sized precursor lymphoid cells (lymphoblasts). It includes the B- and T-cell lymphoblastic lymphoma.","definition_xrefs":["NCIT:C9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic lymphoma","secondary_identifiers":["MEDGEN:42541","DOID:0080147","GARD:3329","SCTID:109965004","UMLS:C0079748","ICD9:202.80","ICDO:9727/3"],"synonyms":[{"name":"lymphoblastic lymphoma","type":"exact"},{"name":"lymphoma, lymphoblastic","type":"related"},{"name":"lymphoma, lymphoblastic, malignant","type":"exact"},{"name":"precursor cell lymphoblastic lymphoma","type":"exact"},{"name":"precursor lymphoblastic lymphoma","type":"exact"}],"termid":"MONDO:0000873","xrefs":{"Monarch":{"xref_id":"0000873"}}}


id: PBO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs (predicted)","termid":"PBO:0002074"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


id: MONDO:0014332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency","secondary_identifiers":["UMLS:C3810404","GARD:13201","OMIM:615751","SCTID:764456001","Orphanet:401948","MEDGEN:816734"],"synonyms":[{"name":"CA-VA deficiency","type":"exact"},{"name":"CA5AD","type":"related"},{"name":"carbonic anhydrase 5A deficiency, hyperammonemia due to","type":"related"},{"name":"carbonic anhydrase VA deficiency","type":"related"},{"name":"carbonic anhydrase VA deficiency, hyperammonemia due to","type":"related"},{"name":"hyperammonemia due to carbonic anhydrase VA deficiency","type":"related"},{"name":"hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency","type":"exact"},{"name":"mitochondrial carbonic anhydrase va deficiency","type":"related"}],"termid":"MONDO:0014332","xrefs":{"Monarch":{"xref_id":"0014332"}}}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: MONDO:1012439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ear necrosis syndrome, non-human animal","termid":"MONDO:1011709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear necrosis syndrome, pig","secondary_identifiers":["OMIA:001711-9823"],"termid":"MONDO:1012439","xrefs":{"Monarch":{"xref_id":"1012439"}}}


id: MONDO:0003588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant adipose tissue neoplasm of the larynx. It predominantly affects males. Clinical presentation includes dysphonia, dysphagia and respiratory symptoms. The supraglottis is the most common site of involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal sarcoma","termid":"MONDO:0002448"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx liposarcoma","secondary_identifiers":["NCIT:C6021","DOID:5696","MEDGEN:235252","UMLS:C1334372"],"synonyms":[{"name":"laryngeal liposarcoma","type":"exact"},{"name":"larynx liposarcoma","type":"exact"},{"name":"lip larynx sarcoma","type":"exact"},{"name":"liposarcoma of larynx","type":"exact"},{"name":"liposarcoma of the larynx","type":"exact"}],"termid":"MONDO:0003588","xrefs":{"Monarch":{"xref_id":"0003588"}}}


id: PBO:0015662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase (predicted)","termid":"PBO:0015662"}


id: GO:1900469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8056324","GOC:dgf","PMID:8614637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylserine formation","type":"exact"},{"name":"down regulation of phosphatidylserine synthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylserine formation","type":"exact"},{"name":"down-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"downregulation of phosphatidylserine anabolism","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylserine formation","type":"exact"},{"name":"downregulation of phosphatidylserine synthesis","type":"exact"},{"name":"inhibition of phosphatidylserine anabolism","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthesis","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylserine formation","type":"exact"},{"name":"inhibition of phosphatidylserine synthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine formation","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900469"}


id: PBO:0070838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 17","termid":"PBO:0070838"}


id: PBO:0064713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 49","termid":"PBO:0064713"}


id: PBO:0082572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082572"}


id: GO:1902221
data:
  {"annotated_genes":["SJAG_03312","SJAG_01455","SJAG_03167","SJAG_03124","SJAG_05007","SJAG_04652","SJAG_02505","SJAG_00493","SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63066,77858,98342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[73199,77154,74171,79226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[63065,76522,78600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"},{"annotations":[106793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00518":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:1902221","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0006572":null,"GO:0009094":null}}


id: GO:0044645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation in a different organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation in another organism (obsolete GO:0044645)","synonyms":[{"name":"modulation of complement activation in other organism","type":"exact"},{"name":"regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044645"}


id: PBO:0053420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 362","termid":"PBO:0053420"}


id: PBO:0090792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Pab2","termid":"PBO:0090792"}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: PBO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S14 (predicted)","termid":"PBO:0001580"}


id: SO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"edited","termid":"SO:0000116"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_CDS","synonyms":[{"name":"edited CDS","type":"exact"}],"termid":"SO:0000935"}


id: GO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide biosynthetic process","synonyms":[{"name":"regulation of nitric oxide anabolism","type":"exact"},{"name":"regulation of nitric oxide biosynthesis","type":"exact"},{"name":"regulation of nitric oxide formation","type":"exact"},{"name":"regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045428"}


id: MONDO:0003462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic polypoid neoplasm characterized by the presence of papillary projections that are lined by epithelial cells and fibrotic stroma.","definition_xrefs":["NCIT:C8986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary adenofibroma","secondary_identifiers":["UMLS:C1377850","MEDGEN:237177","DOID:5479"],"synonyms":[{"name":"papillary adenofibroma","type":"exact"}],"termid":"MONDO:0003462","xrefs":{"Monarch":{"xref_id":"0003462"}}}


id: GO:1903624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA catabolic process","synonyms":[{"name":"regulation of DNA breakdown","type":"exact"},{"name":"regulation of DNA catabolism","type":"exact"},{"name":"regulation of DNA degradation","type":"exact"}],"termid":"GO:1903624"}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: PBO:0058160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4454","termid":"PBO:0058160"}


id: PBO:0058806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7848","termid":"PBO:0058806"}


id: PBO:0079206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 2 (pseudogene)","termid":"PBO:0079206"}


id: PR:Q9UTM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.02","synonyms":[{"name":"Spom972h-iec1","type":"exact"}],"termid":"PR:Q9UTM0"}


id: MONDO:1011301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Auditory system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory system disorder, non-human animal","termid":"MONDO:1011301","xrefs":{"Monarch":{"xref_id":"1011301"}}}


id: MONDO:0015340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DRESS syndrome (Drug Rash with Eosinophilia and Systemic Symptoms) is a hypersensitivity reaction characterized by a generalized skin rash, fever, eosinophilia, lymphocytosis and visceral involvement (hepatitis, nephritis, pneumonitis, pericarditis and myocarditis) and, in some patients, reactivation of human herpes virus 6.","definition_xrefs":["Orphanet:139402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"drug rash with eosinophilia and systemic symptoms","secondary_identifiers":["MESH:D063926","GARD:13629","MedDRA:10058919","MEDGEN:762193","UMLS:C3541994","SCTID:702809001","icd11.foundation:516577496","NCIT:C112208"],"synonyms":[{"name":"DHS","type":"exact"},{"name":"DRESS","type":"exact"},{"name":"DRESS syndrome","type":"exact"},{"name":"Drug hypersensitivity syndrome","type":"exact"},{"name":"Drug reaction with eosinophilia and Systemic symptoms","type":"exact"},{"name":"dress","type":"exact"},{"name":"drug reaction eosinophilic systemic syndrome","type":"exact"}],"termid":"MONDO:0015340","xrefs":{"Monarch":{"xref_id":"0015340"}}}


id: PBO:0066840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 140","termid":"PBO:0066840"}


id: GO:0140664
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419","SJAG_02267","SJAG_01410","SJAG_02708","SJAG_02187","SJAG_00757","SJAG_01620","SJAG_01807","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56942,58061,58842,59800,60125,61137,63178,63961,64637,67388],"is_not":false,"summary":null,"term":"GO:0140664"}]},"cv_name":"molecular_function","definition":"A molecule that recognises toxic DNA structures, and initiates a signaling response, driven by ATP hydrolysis.","definition_xrefs":["PMID:33302090","PMID:33510387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"DNA damage sensor activity","termid":"GO:0140612"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent DNA damage sensor activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"ATP-dependent DNA damage sensing activity","type":"exact"}],"termid":"GO:0140664","terms_by_termid":{"GO:0140664":null}}


id: PR:O42643
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DHX8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.02c","secondary_identifiers":["UniProtKB:O42643"],"synonyms":[{"name":"Spom972h-DHX8","type":"exact"}],"termid":"PR:O42643"}


id: GO:0005950
data:
  {"annotated_genes":["SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103500,114680],"is_not":false,"summary":null,"term":"GO:0005950"}]},"cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two components I and two components II. Catalyzes the formation of anthranilate, pyruvate and L-glutamate from chorismate and L-glutamine.","definition_xrefs":["PMID:4886290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anthranilate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ANTHRANSYN-CPLX"],"termid":"GO:0005950","terms_by_termid":{"GO:0005950":null}}


id: SO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes bases from the coding sequence starting within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_deletion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_deletion","type":"exact"},{"name":"disruptive decrease in CDS length","type":"exact"},{"name":"disruptive inframe deletion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_DELETION","type":"exact"}],"termid":"SO:0001826"}


id: PR:O59831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05021","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C965.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.11c","secondary_identifiers":["UniProtKB:O59831"],"synonyms":[{"name":"Spom972h-SLC7A2","type":"exact"}],"termid":"PR:O59831"}


id: GO:0034229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ethanolamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ethanolamine (2-aminoethanol, monoethanolamine) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids, such as phosphatidylethanolamine.","definition_xrefs":["GOC:rn","PMID:3514579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ethanolamine transport","synonyms":[{"name":"2-aminoethanol transport","type":"exact"},{"name":"monoethanolamine transport","type":"exact"}],"termid":"GO:0034229"}


id: PBO:0060632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin","termid":"PBO:0060632"}


id: GO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte migration","synonyms":[{"name":"down regulation of leukocyte migration","type":"exact"},{"name":"down-regulation of leukocyte migration","type":"exact"},{"name":"downregulation of leukocyte migration","type":"exact"},{"name":"inhibition of leukocyte migration","type":"narrow"},{"name":"negative regulation of immune cell migration","type":"exact"},{"name":"negative regulation of leucocyte migration","type":"exact"}],"termid":"GO:0002686"}


id: PBO:0079324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13B","termid":"PBO:0079324"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: FYPO:0007050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to zinc ion","termid":"FYPO:0005291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during stress response to zinc ion","synonyms":[{"name":"increased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc","type":"exact"},{"name":"increased RNA level during cellular response to high zinc level","type":"exact"},{"name":"increased RNA level during cellular response to replete zinc","type":"related"},{"name":"increased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"increased RNA level during response to zinc ion stress","type":"exact"},{"name":"increased RNA level during response to zinc toxicity","type":"related"},{"name":"increased RNA level during stress response to zinc","type":"exact"},{"name":"increased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"increased transcript level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007050"}


id: PBO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 1","termid":"PBO:0048171"}


id: PBO:0091204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu","termid":"PBO:0091204"}


id: GO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0006790"],"is_obsolete":false,"name":"regulation of glucosinolate biosynthetic process","termid":"GO:0010439"}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:24080089","PMID:19299134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: PBO:0029285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleolus","termid":"PBO:0029285"}


id: MOD:01730
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01730"}


id: PBO:0087269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates several aminophospholipid translocase family members, regulating phospholipid translocation and membrane asymmetry; phosphorylates and inhibits the protein kinase Akl1p, stimulating endocytosis; phosphorylates and inhibits upstream inhibitory kinase Ypk1p; localizes to the cytoplasm, early endosome/TGN, the plasma membrane and the shmoo tip; redundant role with KIN82 in the mating pheromone response; activity stimulated by Gin4p kinase and sphingolipid MIPC","termid":"PBO:0087269"}


id: PBO:0114382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane carboxylic acid transmembrane transporter Tna1","termid":"PBO:0114382"}


id: MONDO:0013239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 41 is a pure form of hereditary spastic paraplegia characterized by onset in adolescence or early adulthood of slowly progressive spastic paraplegia, proximal muscle weakness of the lower extremities and small hand muscles, hyperreflexia, spastic gait and mild urinary compromise.","definition_xrefs":["Orphanet:320355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 41","secondary_identifiers":["MEDGEN:854815","OMIM:613364","UMLS:C3888208","GARD:17471","SCTID:763069002","DOID:0110793"],"synonyms":[{"name":"SPG41","type":"exact"},{"name":"autosomal dominant spastic paraplegia 41","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 41","type":"exact"},{"name":"hereditary spastic paraplegia type 41","type":"exact"},{"name":"spastic paraplegia 41, autosomal dominant","type":"related"}],"termid":"MONDO:0013239","xrefs":{"Monarch":{"xref_id":"0013239"}}}


id: PR:Q9UT11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrt2 gene.","definition_xrefs":["UniProtKB:Q9UT11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized zinc transporter P8A3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.03","synonyms":[{"name":"Spom972h-zrt2","type":"exact"}],"termid":"PR:Q9UT11"}


id: PBO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-ethanolamine phosphate phosphodiesterase (predicted)","termid":"PBO:0031868"}


id: MONDO:0006577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, progressive, non-neoplastic pathologic process that arises from the maxillary sinus mucosal epithelium. It is characterized by the proliferation of keratinizing squamous epithelium and the formation of keratin sheets. It may lead to bone erosion and infections. Surgical removal is the appropriate treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"cholesteatoma","termid":"MONDO:0006530"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"maxillary sinus cholesteatoma","secondary_identifiers":["NCIT:C35868","UMLS:C1334644","MEDGEN:277346","DOID:867"],"synonyms":[{"name":"cholesteatoma (disease) of maxillary sinus","type":"exact"},{"name":"maxillary sinus cholesteatoma (disease)","type":"exact"}],"termid":"MONDO:0006577","xrefs":{"Monarch":{"xref_id":"0006577"}}}


id: GO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-serine.","definition_xrefs":["RESID:AA0350"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-serine (obsolete GO:0050741)","termid":"GO:0050741"}


id: PBO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_upstream_of","termid":"PBO:0034394"}


id: PBO:0073332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7 pseudogene 1","termid":"PBO:0073332"}


id: GO:2000034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed development","termid":"GO:0080050"},{"relation_name":"regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed maturation","termid":"GO:2000034"}


id: MONDO:0022460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia cleft lip palate hypothalamic disorder (obsolete MONDO:0022460)","termid":"MONDO:0022460","xrefs":{"Monarch":{"xref_id":"0022460"}}}


id: PBO:0077173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 2","termid":"PBO:0077173"}


id: PBO:0090995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 with SPX domain Pqr1/Spx1","termid":"PBO:0090995"}


id: PBO:0028955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_small_cells_(obsolete_FYPO:0002846)","termid":"PBO:0028955"}


id: PBO:0067133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 181, pseudogene","termid":"PBO:0067133"}


id: GO:0106250
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96369],"is_not":false,"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific genes sets transcribed by RNA polymerase III.","definition_xrefs":["PMID:15590667","PMID:31833215","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0001217"}],"interesting_parent_ids":["GO:0001217","GO:0003674","GO:0140110","GO:0003700"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase III-specific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106250","terms_by_termid":{"GO:0106250":null}}


id: PBO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteomics data indicates an N terminally extended version of this gene which would contain and upstream stop codon and a frameshift","termid":"PBO:0003009"}


id: MONDO:0700103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder, non-human animal","termid":"MONDO:1011338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional deficiency disease, non-human animal","termid":"MONDO:0700103","xrefs":{"Monarch":{"xref_id":"0700103"}}}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: PBO:0002987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase(predicted)","termid":"PBO:0002987"}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: PBO:0069322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 580, pseudogene","termid":"PBO:0069322"}


id: PBO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid phosphatase (predicted)","termid":"PBO:0000315"}


id: GO:1900603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol A metabolic process","synonyms":[{"name":"tensidol A metabolism","type":"exact"}],"termid":"GO:1900603"}


id: GO:0038148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","Wikipedia:CCL2","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 2 signaling pathway","synonyms":[{"name":"CCL2 signaling pathway","type":"exact"}],"termid":"GO:0038148"}


id: MONDO:0016133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","secondary_identifiers":["Orphanet:207018"],"termid":"MONDO:0016133","xrefs":{"Monarch":{"xref_id":"0016133"}}}


id: GO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vessel member cell. A vessel member cell is one of the components of a vessel in the xylem. It is a dead cell with the wall between adjacent members being variously perforated and the walls that persist variously thickened.","definition_xrefs":["GOC:jid","PO:0002003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheary element differentiation","termid":"GO:1905177"},{"relation_name":"part_of","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem vessel member cell differentiation","synonyms":[{"name":"vessel element cell differentiation","type":"broad"},{"name":"vessel member cell differentiation","type":"broad"}],"termid":"GO:0048759"}


id: PBO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Aru1","termid":"PBO:0001249"}


id: GO:1900514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch utilization system complex assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of starch utilization system complex assembly","termid":"GO:1900512"},{"relation_name":"positively_regulates","term_name":"starch utilization system complex assembly","termid":"GO:0044574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch utilization system complex assembly","synonyms":[{"name":"activation of SUS complex assembly","type":"exact"},{"name":"activation of assembly of starch utilization system complex","type":"exact"},{"name":"activation of starch utilization system complex assembly","type":"narrow"},{"name":"positive regulation of SUS complex assembly","type":"exact"},{"name":"positive regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up regulation of SUS complex assembly","type":"exact"},{"name":"up regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up regulation of starch utilization system complex assembly","type":"exact"},{"name":"up-regulation of SUS complex assembly","type":"exact"},{"name":"up-regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up-regulation of starch utilization system complex assembly","type":"exact"},{"name":"upregulation of SUS complex assembly","type":"exact"},{"name":"upregulation of assembly of starch utilization system complex","type":"exact"},{"name":"upregulation of starch utilization system complex assembly","type":"exact"}],"termid":"GO:1900514"}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: PR:Q9P7F2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.04","synonyms":[{"name":"Spom972h-cao1","type":"exact"}],"termid":"PR:Q9P7F2"}


id: PBO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicrotuBule Organizer","termid":"PBO:0005596"}


id: PATO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark red","termid":"PATO:0001261"}


id: MONDO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease leading to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive coarse facial features, short stature, cardio-respiratory involvement and skeletal abnormalities. It manifests as a continuum varying from a severe to an attenuated form without neuronal involvement.","definition_xrefs":["Orphanet:580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","termid":"MONDO:0015920"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal disease with hypertrophic cardiomyopathy (obsolete MONDO:0016326)","termid":"MONDO:0016326"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with skin involvement (obsolete MONDO:0019301)","termid":"MONDO:0019301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2","secondary_identifiers":["GARD:6675","NCIT:C61260","ICD10CM:E76.1","NORD:1255","OMIM:309900","UMLS:C0026705","NANDO:1200097","DOID:12799","icd11.foundation:1056274204","MEDGEN:7734","Orphanet:79388","MedDRA:10056889","SCTID:70737009","NANDO:2200548","MESH:D016532"],"synonyms":[{"name":"Hunter syndrome","type":"exact"},{"name":"Hunter's syndrome","type":"exact"},{"name":"I2S deficiency","type":"exact"},{"name":"IDS deficiency","type":"exact"},{"name":"MPS 2","type":"exact"},{"name":"MPS II","type":"exact"},{"name":"MPS II - Hunter syndrome","type":"exact"},{"name":"MPS with skin involvement","type":"exact"},{"name":"MPS2","type":"exact"},{"name":"MPSII","type":"exact"},{"name":"Mucopolysaccharidosis Type II","type":"exact"},{"name":"SIDS deficiency","type":"exact"},{"name":"attenuated MPS (subtype; formerly known as mild MPS II)","type":"exact"},{"name":"deficiency of iduronate-2-sulphatase","type":"exact"},{"name":"iduronate 2-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis II","type":"exact"},{"name":"mucopolysaccharidosis II, X-linked recessive","type":"exact"},{"name":"mucopolysaccharidosis type 2","type":"exact"},{"name":"mucopolysaccharidosis type II","type":"exact"},{"name":"mucopolysaccharidosis with skin involvement","type":"exact"},{"name":"mucopolysaccharidosis, MPS-II","type":"exact"},{"name":"mucopolysaccharidosis, type 2","type":"exact"},{"name":"mucopolysaccharidosis, type II","type":"exact"},{"name":"severe MPS II","type":"exact"},{"name":"sulfoiduronate sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010674","xrefs":{"Monarch":{"xref_id":"0010674"}}}


id: GO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium sensitivity/resistance (obsolete GO:0019830)","synonyms":[{"name":"cadmium sensitivity/resistance","type":"exact"}],"termid":"GO:0019830"}


id: GO:0005848
data:
  {"annotated_genes":["SJAG_02037","SJAG_01412","SJAG_04022","SJAG_03594","SJAG_01791","SJAG_03853"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93433,98127,99089,99624,109830,111585],"is_not":false,"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"A protein complex required for mRNA cleavage but not for poly(A) addition.","definition_xrefs":["PMID:10357856","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA cleavage factor complex","termid":"GO:0005849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01412":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_03594":null,"SJAG_03853":null,"SJAG_04022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA cleavage stimulating factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CstF complex","type":"narrow"},{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0005848","terms_by_termid":{"GO:0005848":null}}


id: PBO:0069250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 505, pseudogene","termid":"PBO:0069250"}


id: PBO:0048879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member E, pseudogene","termid":"PBO:0048879"}


id: MONDO:0008180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Failure of the soft palate to reach the posterior pharyngeal wall to close the opening between the oral and nasal cavities. Incomplete velopharyngeal closure is primarily related to surgeries (adenoidectomy; cleft palate) or an incompetent palatopharyngeal sphincter. It is characterized by hypernasal speech.","definition_xrefs":["MESH:D014681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital velopharyngeal incompetence","secondary_identifiers":["icd11.foundation:158386351","GARD:5470","Orphanet:2291","UMLS:C0042454","OMIM:167500","MEDGEN:52992"],"synonyms":[{"name":"palatopharyngeal incompetence","type":"related"},{"name":"velopharyngeal incompetence","type":"related"},{"name":"velopharyngeal insufficiency","type":"related"}],"termid":"MONDO:0008180","xrefs":{"Monarch":{"xref_id":"0008180"}}}


id: PBO:0089644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, magnesium ion Mme1","termid":"PBO:0089644"}


id: MONDO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the inner ear secondary to an infectious process. Symptoms include severe vertigo, nausea, vomiting, anxiety, and pain. Viral etiology is most common, and recent history of an upper respiratory infection is common. In rare cases an infection of the middle ear can spread to the inner ear, resulting in a bacterial or fungal etiology.","definition_xrefs":["NCIT:C27339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious otitis interna","secondary_identifiers":["UMLS:C1168225","MEDGEN:217000"],"synonyms":[{"name":"infectious labyrinthitis","type":"exact"},{"name":"infectious otitis interna","type":"exact"},{"name":"inner Ear infection","type":"exact"},{"name":"inner ear infection","type":"exact"},{"name":"internal Ear infection","type":"exact"}],"termid":"MONDO:0002812","xrefs":{"Monarch":{"xref_id":"0002812"}}}


id: MONDO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V short isoforms-related bleeding disorder","secondary_identifiers":["GARD:22413","Orphanet:599519","MEDGEN:1843125","UMLS:C5680279"],"synonyms":[{"name":"FV short isoforms-related bleeding disorder","type":"exact"}],"termid":"MONDO:0035742","xrefs":{"Monarch":{"xref_id":"0035742"}}}


id: MONDO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative spinal disease that can involve any part of the vertebra, the intervertebral disk, and the surrounding soft tissue.","definition_xrefs":["MESH:D055009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis","secondary_identifiers":["MEDGEN:21295","ICD9:721.9","ICD10CM:M47","UMLS:C0038019","SCTID:8847002","ICD9:721.3","DOID:2247","SCTID:48210000"],"synonyms":[{"name":"lumbar spondylosis with myelopathy","type":"exact"},{"name":"lumbosacral spondylosis without myelopathy","type":"exact"},{"name":"spondylogenic compression of lumbar spinal cord","type":"exact"},{"name":"spondylogenic compression of thoracic spinal cord","type":"exact"},{"name":"spondylosis with myelopathy","type":"exact"},{"name":"thoracic or lumbar spondylosis with myelopathy","type":"exact"}],"termid":"MONDO:0002253","xrefs":{"Monarch":{"xref_id":"0002253"}}}


id: FYPO:0001701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bortezomib. Cells stop growing (and may die) at a concentration of bortezomib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to bortezomib","synonyms":[{"name":"hypersensitive to bortezomib","type":"exact"},{"name":"sensitive to Velcade","type":"exact"},{"name":"sensitive to bortezomib during mitotic cell cycle","type":"related"},{"name":"sensitive to bortezomib during vegetative growth","type":"exact"}],"termid":"FYPO:0001701"}


id: MONDO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal infection of joint","secondary_identifiers":["MEDGEN:509210","icd11.foundation:1787713905","SCTID:44743006","UMLS:C0153216"],"synonyms":[{"name":"gonococcal arthritis","type":"related"},{"name":"gonococcal infection of joint","type":"exact"},{"name":"gonococcal joint infection","type":"related"},{"name":"gonococcal rheumatism","type":"related"}],"termid":"MONDO:0041903","xrefs":{"Monarch":{"xref_id":"0041903"}}}


id: MONDO:1010286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumothorax that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumothorax, non-human animal","secondary_identifiers":["OMIA:000804"],"termid":"MONDO:1010286","xrefs":{"Monarch":{"xref_id":"1010286"}}}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 5","termid":"PBO:0060288"}


id: MONDO:1012928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in Rhesus monkey due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, Rhesus monkey","secondary_identifiers":["OMIA:002538-9544"],"termid":"MONDO:1012928","xrefs":{"Monarch":{"xref_id":"1012928"}}}


id: PBO:0055883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit A","termid":"PBO:0055883"}


id: GO:1900275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase C activity (obsolete GO:1900275)","synonyms":[{"name":"down regulation of lecithinase C activity","type":"related"},{"name":"down regulation of lipophosphodiesterase C","type":"related"},{"name":"down regulation of phosphatidase C","type":"related"},{"name":"down regulation of phospholipase C activity","type":"exact"},{"name":"down-regulation of lecithinase C activity","type":"related"},{"name":"down-regulation of lipophosphodiesterase C","type":"related"},{"name":"down-regulation of phosphatidase C","type":"related"},{"name":"down-regulation of phospholipase C activity","type":"exact"},{"name":"downregulation of lecithinase C activity","type":"related"},{"name":"downregulation of lipophosphodiesterase C","type":"related"},{"name":"downregulation of phosphatidase C","type":"related"},{"name":"downregulation of phospholipase C activity","type":"exact"},{"name":"inhibition of lecithinase C activity","type":"related"},{"name":"inhibition of lipophosphodiesterase C","type":"related"},{"name":"inhibition of phosphatidase C","type":"related"},{"name":"inhibition of phospholipase C activity","type":"narrow"},{"name":"negative regulation of lecithinase C activity","type":"related"},{"name":"negative regulation of lipophosphodiesterase C","type":"related"},{"name":"negative regulation of phosphatidase C","type":"related"}],"termid":"GO:1900275"}


id: FYPO:0007962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after nitrogen removal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency during nitrogen starvation","termid":"FYPO:0007962"}


id: PBO:0083625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase and putative helicase; involved in synthesis-dependent strand annealing-mediated homologous recombination; ensures precise end-joining along with Srs2p in the Yku70p/Yku80p/Lig4p-dependent NHEJ pathway; controls 2-micron plasmid copy number by regulating the levels of the Flp1p recombinase; localizes to both the mitochondrion and the nucleus; contains a Snf2/Swi2 family ATPase/helicase and a RING finger domain; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0083625"}


id: MONDO:0035014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary orthostatic disorder (obsolete MONDO:0035014)","secondary_identifiers":["Orphanet:521236"],"termid":"MONDO:0035014","xrefs":{"Monarch":{"xref_id":"0035014"}}}


id: GO:1904039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:kom","PMID:15514116","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron export across plasma membrane","termid":"GO:1904038"},{"relation_name":"negatively_regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of iron export across plasma membrane","synonyms":[{"name":"down regulation of ferrous iron export","type":"narrow"},{"name":"down regulation of iron(2+) export","type":"narrow"},{"name":"down-regulation of ferrous iron export","type":"narrow"},{"name":"down-regulation of iron(2+) export","type":"narrow"},{"name":"downregulation of ferrous iron export","type":"narrow"},{"name":"downregulation of iron(2+) export","type":"narrow"},{"name":"inhibition of ferrous iron export","type":"narrow"},{"name":"inhibition of iron(2+) export","type":"narrow"},{"name":"negative regulation of ferrous iron export","type":"narrow"},{"name":"negative regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904039"}


id: PBO:0110306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly ferredoxin Etp1/ heme O monooxygenase Cox15, fusion protein","termid":"PBO:0110306"}


id: GO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary musculoskeletal movement","termid":"GO:0050882"}


id: PBO:0070365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 3","termid":"PBO:0070365"}


id: MONDO:0800110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent tachypnoe of infancy that presents with additional minor abnormalities upon scanning, including ground-glass opacities in other locations, focal consolidations, parenchymal cysts or bronchial wall thickening (N=80; 37%).","definition_xrefs":["PMID:26474448","PMID:32761949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent tachypnoe of infancy","termid":"MONDO:0800109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy, aberrant","synonyms":[{"name":"PTI, aberrant","type":"exact"}],"termid":"MONDO:0800110","xrefs":{"Monarch":{"xref_id":"0800110"}}}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: GO:0060296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of cilium beating involved in ciliary motility.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:cilia","GOC:krc","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium beat frequency","termid":"GO:0003356"},{"relation_name":"is_a","term_name":"regulation of cilium movement involved in cell motility","termid":"GO:0060295"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0060296"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_00140","SJAG_02286","SJAG_00368","SJAG_01297","SJAG_01863","SJAG_01775","SJAG_01371","SJAG_01662","SJAG_01613","SJAG_03011","SJAG_03437","SJAG_03673","SJAG_00332","SJAG_00594","SJAG_03073","SJAG_02045","SJAG_05220","SJAG_02761","SJAG_02336","SJAG_00397","SJAG_01224","SJAG_02737","SJAG_02651","SJAG_02561","SJAG_00918","SJAG_01546","SJAG_01370","SJAG_04143","SJAG_04001","SJAG_03540","SJAG_04597","SJAG_05319","SJAG_05266","SJAG_02431","SJAG_00851","SJAG_00113","SJAG_02731","SJAG_05185","SJAG_01211"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103260,111418,113964,87710,97566,100729,116968,90958,95178,102968,91351,111064,91810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[101436,106602,111241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[99234,97641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[97568,76333,99235,87714,91353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94384],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[103750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[118695,103905,100386,108281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[107519,114117,116942,108902,89097,89702,98623,109907,90946,100522,96759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[91116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[116209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[104550,104883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: GO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009183"}


id: MONDO:0014216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the SPAG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 28","secondary_identifiers":["GARD:15977","MEDGEN:816036","DOID:0110607","OMIM:615505","UMLS:C3809706"],"synonyms":[{"name":"CILD28","type":"exact"},{"name":"SPAG1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 28","type":"related"},{"name":"ciliary dyskinesia, primary, 28, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 28","type":"exact"},{"name":"primary ciliary dyskinesia 28 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in SPAG1","type":"exact"},{"name":"primary ciliary dyskinesia type 28","type":"exact"}],"termid":"MONDO:0014216","xrefs":{"Monarch":{"xref_id":"0014216"}}}


id: PBO:0058279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4656","termid":"PBO:0058279"}


id: PBO:0076142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 1","termid":"PBO:0076142"}


id: MONDO:0100306
data:
  {"annotated_genes":["SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"}]},"cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of peroxisome oxidation.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of defective peroxisome oxidative status","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"disorder of defective peroxisome oxidative status","type":"exact"}],"termid":"MONDO:0100306","terms_by_termid":{"MONDO:0013571":null},"xrefs":{"Monarch":{"xref_id":"0100306"}}}


id: MOD:01479
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 4'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-tryptophan","synonyms":[{"name":"4-fluorotryptophan","type":"exact"}],"termid":"MOD:01479"}


id: MONDO:0016360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrothrombocytopenia with mitral valve insufficiency is a rare hemorrhagic disorder due to a platelet anomaly characterized by dysfunctional platelets of abnormally large size, moderate thrombocytopenia, prolonged bleeding time and mild bleeding diathesis (ecchymoses and epistaxis), associated with mitral valve insufficiency.","definition_xrefs":["Orphanet:220448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"marcothrombocytopenia with mitral valve insufficiency","secondary_identifiers":["GARD:20538","MEDGEN:1649052","UMLS:C4749648"],"termid":"MONDO:0016360","xrefs":{"Monarch":{"xref_id":"0016360"}}}


id: GO:0018427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"copper incorporation into metallo-sulfur cluster","synonyms":[{"name":"copper incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018427"}


id: MONDO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of autosomal recessive lysosomal storage disorders marked by the accumulation of gangliosides. They are caused by impaired enzymes or defective cofactors required for normal ganglioside degradation in the lysosomes. Gangliosidoses are classified by the specific ganglioside accumulated in the defective degradation pathway.","definition_xrefs":["MESH:D005733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"gangliosidosis","secondary_identifiers":["icd11.foundation:797306953","UMLS:C0017083","SCTID:50967008","MEDGEN:42149","DOID:2368","GARD:12510","Orphanet:309144"],"termid":"MONDO:0017719","xrefs":{"Monarch":{"xref_id":"0017719"}}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: PR:O94484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.03","synonyms":[{"name":"Spom972h-SPCC417.03","type":"exact"}],"termid":"PR:O94484"}


id: PBO:0080762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 1","termid":"PBO:0080762"}


id: GO:0160126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a calcium ion by a channel that opens in response to a change in pH.","definition_xrefs":["PMID:30930064","PMID:34767445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pH-gated calcium channel activity","synonyms":[{"name":"pH-dependent calcium channel activity","type":"related"},{"name":"pH-sensitive calcium channel activity","type":"related"}],"termid":"GO:0160126"}


id: PBO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPN upstream open reading frame like (pseudogene)","termid":"PBO:0075220"}


id: GO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:12370374","PMID:2113175","PMID:9186655","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"isotype switching to IgG isotypes","synonyms":[{"name":"class switching to IgG isotypes","type":"exact"},{"name":"isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048291"}


id: GO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud is generated and organized.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud morphogenesis","termid":"GO:0060675"}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


id: GO:0033878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: diacylglycerol + H2O = monoacylglycerol + a carboxylate; triacylglycerol + H2O = diacylglycerol + a carboxylate; and monoacylglycerol + H2O = glycerol + a carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hormone-sensitive lipase activity (obsolete GO:0033878)","termid":"GO:0033878"}


id: PBO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase deficiency","termid":"PBO:0025487"}


id: PBO:0087410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (145 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification","termid":"PBO:0087410"}


id: PBO:0091184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf281","termid":"PBO:0091184"}


id: PBO:0088866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1","termid":"PBO:0088866"}


id: MONDO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary inclusion body myopathy type 4 is a rare non-dystrophic myopathy characterized by slowly progressive muscular weakness and atrophy initially involving proximal lower limbs and hip girdle and later on shoulder girdle, proximal upper limbs and axial muscles. Ambulation is usually preserved. Congophilic inclusions with cytoplasmic inclusions of 15-21 nm filaments on electron microscopy are revealed in muscle biopsy.","definition_xrefs":["Orphanet:324381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"hereditary inclusion body myopathy type 4","secondary_identifiers":["UMLS:C4749501","GARD:21440","MEDGEN:1669421"],"synonyms":[{"name":"HIBM4","type":"exact"}],"termid":"MONDO:0017931","xrefs":{"Monarch":{"xref_id":"0017931"}}}


id: FYPO:0003266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is normal (i.e. indistinguishable from wild type) during a cellular response to nutrient.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity during cellular response to nutrient","synonyms":[{"name":"normal alpha,alpha-trehalase activity in response to nutrient","type":"exact"},{"name":"normal neutral trehalase activity during cellular response to nutrient","type":"exact"},{"name":"normal trehalase activity during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0003266"}


id: MONDO:0004344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood malignant hemangiopericytoma","secondary_identifiers":["DOID:7731","NCIT:C8090","UMLS:C0279983","MEDGEN:124686"],"synonyms":[{"name":"malignant childhood hemangiopericytoma","type":"exact"},{"name":"malignant hemangiopericytoma","type":"broad"},{"name":"malignant paediatric hemangiopericytoma","type":"exact"},{"name":"malignant pediatric hemangiopericytoma","type":"exact"}],"termid":"MONDO:0004344","xrefs":{"Monarch":{"xref_id":"0004344"}}}


id: MONDO:0013167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 16","secondary_identifiers":["OMIM:613164","MEDGEN:442620","UMLS:C2751012","MESH:C567726"],"synonyms":[{"name":"PARK16","type":"exact"},{"name":"Parkinson disease 16","type":"related"}],"termid":"MONDO:0013167","xrefs":{"Monarch":{"xref_id":"0013167"}}}


id: MONDO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma of the colon characterized by the presence of pools of extracellular mucin. Malignant glandular epithelial cells are present in the mucin collections. Mucin constitutes more than 50% of the lesion.","definition_xrefs":["NCIT:C7966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon mucinous adenocarcinoma","secondary_identifiers":["DOID:3029","EFO:0000364","MEDGEN:76007","UMLS:C0279639"],"synonyms":[{"name":"colloid adenocarcinoma of colon","type":"exact"},{"name":"colloid adenocarcinoma of the colon","type":"exact"},{"name":"colloid colon adenocarcinoma","type":"exact"},{"name":"colloidal adenocarcinoma of colon","type":"exact"},{"name":"colloidal adenocarcinoma of the colon","type":"exact"},{"name":"colloidal colon adenocarcinoma","type":"exact"},{"name":"colon colloid adenocarcinoma","type":"exact"},{"name":"colon colloidal adenocarcinoma","type":"exact"},{"name":"colon mucinous adenocarcinoma","type":"exact"},{"name":"colonic colloid adenocarcinoma","type":"exact"},{"name":"colonic colloidal adenocarcinoma","type":"exact"},{"name":"colonic mucinous adenocarcinoma","type":"exact"},{"name":"mucinous adenocarcinoma of colon","type":"exact"},{"name":"mucinous adenocarcinoma of the colon","type":"exact"},{"name":"mucinous colon adenocarcinoma","type":"exact"}],"termid":"MONDO:0005007","xrefs":{"Monarch":{"xref_id":"0005007"}}}


id: PBO:0086568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR029W is not an essential gene","termid":"PBO:0086568"}


id: PBO:0064969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 25","termid":"PBO:0064969"}


id: PBO:0065031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 6","termid":"PBO:0065031"}


id: PBO:0063099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6B pseudogene 1","termid":"PBO:0063099"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PR:O59745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrl1 gene.","definition_xrefs":["UniProtKB:O59745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose 6-phosphate receptor-like protein C530.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.09c","synonyms":[{"name":"Spom972h-mrl1","type":"exact"}],"termid":"PR:O59745"}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: GO:0010901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"regulation of VLDL remodeling","type":"exact"},{"name":"regulation of VLDL remodelling","type":"exact"},{"name":"regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010901"}


id: MONDO:0015723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 12p is an extremely rare chromosomal disorder (over 30 cases reported worldwide) characterized by craniofacial malformations (round face, prominent cheeks, high bulging forehead, broad and flat nasal bridge, short nose with anteverted nostrils, long philtrum, prominent and everted lower lip, low-set ears, abnormally folded helix, protuberant antihelix), postnatal growth retardation, mental and psychomotor retardation, generalized hypotonia, abnormally short wide hands and/or other abnormalities.","definition_xrefs":["Orphanet:1699"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 12","termid":"MONDO:0016933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 12p","secondary_identifiers":["MEDGEN:162880","UMLS:C0795845","MESH:C538299","GARD:5305"],"synonyms":[{"name":"12p duplication","type":"related"},{"name":"12p trisomy","type":"related"},{"name":"Duplication 12p","type":"exact"},{"name":"chromosome 12p duplication","type":"related"},{"name":"partial trisomy 12p","type":"related"},{"name":"trisomy type 12p","type":"exact"}],"termid":"MONDO:0015723","xrefs":{"Monarch":{"xref_id":"0015723"}}}


id: PBO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure may be incorrect","termid":"PBO:0000214"}


id: GO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + tyramine = CoA + N-feruloyltyramine.","definition_xrefs":["EC:2.3.1.110","MetaCyc:TYRAMINE-N-FERULOYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"tyramine N-feruloyltransferase activity","secondary_identifiers":["RHEA:19685"],"synonyms":[{"name":"feruloyl-CoA tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"feruloyl-CoA:tyramine N-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"feruloyltyramine synthase activity","type":"related"},{"name":"tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"tyramine feruloyltransferase activity","type":"related"}],"termid":"GO:0050366"}


id: PBO:0113231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear mRNAs (NAD-RNAs); also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0113231"}


id: MONDO:0044907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma which has spread from its original site of growth to another anatomic site.","definition_xrefs":["NCIT:C4104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"metastatic carcinoma","termid":"MONDO:0024879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic squamous cell carcinoma","secondary_identifiers":["UMLS:C0334246","SCTID:403906006","MEDGEN:90749"],"synonyms":[{"name":"Metastatic squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0044907","xrefs":{"Monarch":{"xref_id":"0044907"}}}


id: PBO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 7","termid":"PBO:0052639"}


id: GO:0022021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of caudal ganglionic eminence cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal ganglionic eminence cell proliferation","termid":"GO:0022021"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: GO:0140094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cytoplasmic lattice of the the mammalian ooplasm.","definition_xrefs":["PMID:37922900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cytoplasmic lattice","termid":"GO:0140094"}


id: FYPO:0005611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 occurs to a greater extent than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased H4-K20 dimethylation at double-strand break site during vegetative growth","synonyms":[{"name":"increased H4-K20 dimethylation at DSB during vegetative growth","type":"exact"},{"name":"increased H4K20me2 at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"},{"name":"increased histone H4-K20 dimethylation at site of double-strand break during vegetative growth","type":"exact"},{"name":"increased histone lysine H4-K20 dimethylation at double-strand break site during vegetative growth","type":"exact"}],"termid":"FYPO:0005611"}


id: PBO:0065782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 2","termid":"PBO:0065782"}


id: GO:1902763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"negatively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic skeletal joint development","synonyms":[{"name":"down regulation of embryonic skeletal joint development","type":"exact"},{"name":"down-regulation of embryonic skeletal joint development","type":"exact"},{"name":"downregulation of embryonic skeletal joint development","type":"exact"},{"name":"inhibition of embryonic skeletal joint development","type":"narrow"}],"termid":"GO:1902763"}


id: GO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 long-chain alcohol + O2 = 2 long-chain aldehyde + 2 H2O.","definition_xrefs":["EC:1.1.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"long-chain-alcohol oxidase activity","secondary_identifiers":["RHEA:22756","MetaCyc:RXN-4444"],"synonyms":[{"name":"fatty alcohol oxidase activity","type":"exact"},{"name":"fatty alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"long-chain fatty acid oxidase activity","type":"related"},{"name":"long-chain fatty alcohol oxidase activity","type":"exact"},{"name":"long-chain-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0046577"}


id: MOD:01089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthyl","synonyms":[{"name":"Xan","type":"exact"}],"termid":"MOD:01089"}


id: MONDO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly of fingers","secondary_identifiers":["MEDGEN:609221","icd11.foundation:1146378807","GARD:12460","Orphanet:294942","SCTID:205131007","UMLS:C0431904"],"synonyms":[{"name":"postaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017426","xrefs":{"Monarch":{"xref_id":"0017426"}}}


id: FYPO:0006439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of X-shaped DNA replication intermediates is greater than normal. X-shaped intermediates may be formed by replication forks moving bidirectionally from outside the region, or by the increased formation or persistence of Holliday junctions or similar recombination intermediates.","definition_xrefs":["PMID:23071723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of X-shaped replication intermediates","synonyms":[{"name":"abnormal proportion of X-shaped replication intermediates","type":"related"},{"name":"increased level of X-shaped DNA replication intermediates","type":"exact"},{"name":"increased level of X-shaped replication intermediates during mitotic cell cycle","type":"related"},{"name":"increased level of X-shaped replication intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0006439"}


id: PBO:0088915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate-tRNA ligase Drs1","termid":"PBO:0088915"}


id: MONDO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal cortical hypofunction (obsolete MONDO:0001047)","termid":"MONDO:0001047","xrefs":{"Monarch":{"xref_id":"0001047"}}}


id: PBO:0081523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 432","termid":"PBO:0081523"}


id: PBO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_population_growth_during_recovery_from_stationary_phase","termid":"PBO:0030175"}


id: PBO:0040541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 9","termid":"PBO:0040541"}


id: GO:1904446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18057314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of Sertoli cell barrier","termid":"GO:1904444"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"activation of establishment of BTB","type":"narrow"},{"name":"activation of establishment of SCB","type":"narrow"},{"name":"activation of establishment of Sertoli cell barrier","type":"narrow"},{"name":"activation of establishment of blood-testis barrier","type":"narrow"},{"name":"positive regulation of establishment of BTB","type":"exact"},{"name":"positive regulation of establishment of SCB","type":"exact"},{"name":"positive regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up regulation of establishment of BTB","type":"exact"},{"name":"up regulation of establishment of SCB","type":"exact"},{"name":"up regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up regulation of establishment of blood-testis barrier","type":"exact"},{"name":"up-regulation of establishment of BTB","type":"exact"},{"name":"up-regulation of establishment of SCB","type":"exact"},{"name":"up-regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"up-regulation of establishment of blood-testis barrier","type":"exact"},{"name":"upregulation of establishment of BTB","type":"exact"},{"name":"upregulation of establishment of SCB","type":"exact"},{"name":"upregulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"upregulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904446"}


id: FYPO:0002705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methionine. Cells stop growing (and may die) at a concentration of methionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to methionine","synonyms":[{"name":"hypersensitive to methionine","type":"exact"},{"name":"methionine inhibited","type":"exact"},{"name":"sensitive to methionine during mitotic cell cycle","type":"related"},{"name":"sensitive to methionine during vegetative growth","type":"exact"}],"termid":"FYPO:0002705"}


id: PBO:0067574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 731, pseudogene","termid":"PBO:0067574"}


id: GO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-7 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-7 production","secondary_identifiers":["GO:0042227","GO:0072605"],"synonyms":[{"name":"IL-7 production","type":"exact"},{"name":"interleukin-7 biosynthetic process","type":"narrow"},{"name":"interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032636"}


id: PBO:0091337
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNA Adenosine Deaminase","termid":"PBO:0091337"}


id: GO:0061851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the lamellipodium which represents the distal part of the structure.","definition_xrefs":["PMID:22339865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leading edge of lamellipodium","termid":"GO:0061851"}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: GO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a genistein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to genistein","termid":"GO:0033595"},{"relation_name":"is_a","term_name":"cellular response to hydroxyisoflavone","termid":"GO:0071413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to genistein","termid":"GO:0071412"}


id: MONDO:0005359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of clinical liver diseases ranging from mild biochemical abnormalities to acute liver failure, caused by drugs, drug metabolites, and chemicals from the environment.","definition_xrefs":["MESH:D056486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"drug-induced liver injury","secondary_identifiers":["SCTID:197352008","EFO:0004228","MEDGEN:163652","UMLS:C0860207"],"synonyms":[{"name":"drug induced hepatotoxicity","type":"exact"},{"name":"drug-induced disorder of liver","type":"exact"}],"termid":"MONDO:0005359","xrefs":{"Monarch":{"xref_id":"0005359"}}}


id: PR:P30776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand-break repair protein rad21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12585:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit rad21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.17c","secondary_identifiers":["UniProtKB:P30776"],"synonyms":[{"name":"SCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC338.17c","type":"related"},{"name":"Spom972h-RAD21","type":"exact"},{"name":"double-strand-break repair protein rad21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30776"}


id: GO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein complex assembly","termid":"GO:0090034"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated protein complex assembly","termid":"GO:0051131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated protein complex assembly","termid":"GO:0090035"}


id: PBO:0061987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 7 pseudogene","termid":"PBO:0061987"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: MONDO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with central nervous system predominant involvement (obsolete MONDO:0018118)","secondary_identifiers":["Orphanet:352306"],"termid":"MONDO:0018118","xrefs":{"Monarch":{"xref_id":"0018118"}}}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: PBO:0084939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucin family member that functions as an osmosensor in the HOG pathway; large, highly glycosylated protein that functions redundantly with Msb2p in Sho1p-mediated osmostresss induction of the HOG signaling pathway; cytoplasmic domain interacts with Ahk1p a scaffold protein that prevents cross talk with the Kss1p MAPK of the filamentous growth pathway; mutant displays defects in beta-1,3 glucan synthesis and bud site selection","termid":"PBO:0084939"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_02588","SJAG_03955","SJAG_02354","SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90545,73077,95708,69766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["PMID:14617809","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: MONDO:0014067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short ulna-dysmorphism-hypotonia-intellectual disability syndrome","secondary_identifiers":["UMLS:C3554609","MEDGEN:767523","GARD:17548","DOID:0081201","Orphanet:357175","OMIM:615162"],"synonyms":[{"name":"MRT35","type":"related"},{"name":"intellectual disability, autosomal recessive 35","type":"related"},{"name":"mental retardation, autosomal recessive 35","type":"related"}],"termid":"MONDO:0014067","xrefs":{"Monarch":{"xref_id":"0014067"}}}


id: PBO:0028541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_septum","termid":"PBO:0028541"}


id: PBO:0076669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2","termid":"PBO:0076669"}


id: MONDO:0010587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of epidermodysplasia verruciformis.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"epidermodysplasia verruciformis","termid":"MONDO:0009176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"epidermodysplasia verruciformis, X-linked","secondary_identifiers":["GARD:15291","MEDGEN:337033","UMLS:C1844589","OMIM:305350","MESH:C564430"],"synonyms":[{"name":"EDV2","type":"related"},{"name":"EDVX","type":"related"},{"name":"X-linked epidermodysplasia verruciformis","type":"exact"},{"name":"epidermodysplasia verruciformis, X-linked","type":"exact"}],"termid":"MONDO:0010587","xrefs":{"Monarch":{"xref_id":"0010587"}}}


id: GO:1905467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-quadruplex DNA unwinding (obsolete GO:1905467)","synonyms":[{"name":"activation of G-quadruplex DNA unwinding","type":"narrow"},{"name":"up regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"upregulation of G-quadruplex DNA unwinding","type":"exact"}],"termid":"GO:1905467"}


id: GO:0009954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation","synonyms":[{"name":"proximal/distal pattern specification","type":"narrow"}],"termid":"GO:0009954"}


id: PBO:0072026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 2","termid":"PBO:0072026"}


id: PBO:0027941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_glucose_starvation","termid":"PBO:0027941"}


id: SO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified leucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_leucine","secondary_identifiers":["MOD:00911"],"synonyms":[{"name":"ModLeu","type":"exact"},{"name":"modified L leucine","type":"exact"},{"name":"modified L-leucine ","type":"exact"}],"termid":"SO:0001401"}


id: PBO:0110360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 4","termid":"PBO:0110360"}


id: MONDO:0032782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 63 with lymphoproliferation and autoimmunity","secondary_identifiers":["MEDGEN:1682943","OMIM:618495","DOID:0111997","UMLS:C5193126"],"synonyms":[{"name":"Cd122 Deficiency","type":"related"},{"name":"IMD63","type":"related"},{"name":"IMMUNODEFICIENCY 63 WITH LYMPHOPROLIFERATION AND AUTOIMMUNITY","type":"related"},{"name":"Il2Rb Deficiency","type":"related"},{"name":"Interleukin 2 Receptor, Beta, Deficiency of","type":"related"}],"termid":"MONDO:0032782","xrefs":{"Monarch":{"xref_id":"0032782"}}}


id: GO:0007155
data:
  {"annotated_genes":["SJAG_01778","SJAG_03473","SJAG_00156","SJAG_04191","SJAG_03484","SJAG_02380","SJAG_04720","SJAG_01975","SJAG_00239","SJAG_04723","SJAG_01253","SJAG_00910","SJAG_03802","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76493,78431,69822,76960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[103556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[99294,98573],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[103557,106266],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[116169,108774,105912,111390,108651,114104],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.","definition_xrefs":["GOC:hb","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_adhesion","GO:0098602"],"synonyms":[{"name":"cell adhesion molecule activity","type":"related"},{"name":"single organism cell adhesion","type":"related"}],"termid":"GO:0007155","terms_by_termid":{"GO:0000128":null,"GO:0022408":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: SO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_cluster","synonyms":[{"name":"J cluster","type":"exact"},{"name":"J-CLUSTER","type":"exact"}],"termid":"SO:0000513"}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: PBO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 24","termid":"PBO:0070653"}


id: GO:0038114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-21 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-21","termid":"GO:0098757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-21-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020958"],"synonyms":[{"name":"IL-21-mediated signaling pathway","type":"exact"},{"name":"interleukin-21-mediated signalling pathway","type":"exact"}],"termid":"GO:0038114"}


id: MONDO:0011519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SIX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 23","secondary_identifiers":["MEDGEN:343162","GARD:1708","DOID:0110553","MESH:C565357","OMIM:605192","UMLS:C1854594"],"synonyms":[{"name":"DFNA 23","type":"narrow"},{"name":"DFNA23","type":"narrow"},{"name":"SIX1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 23","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 23","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SIX1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 23","type":"narrow"},{"name":"deafness, autosomal dominant 23","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 23","type":"narrow"},{"name":"deafness, autosomal dominant type 23","type":"narrow"}],"termid":"MONDO:0011519","xrefs":{"Monarch":{"xref_id":"0011519"}}}


id: FYPO:0007904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glucan synthesis","synonyms":[{"name":"abnormal glucan biosynthetic process","type":"exact"},{"name":"beta-glucan synthesis defective","type":"exact"}],"termid":"FYPO:0007904"}


id: MONDO:0007840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid artery, spontaneous dissection of","secondary_identifiers":["UMLS:C1840073","OMIM:147820","MEDGEN:333477","MESH:C564125"],"synonyms":[{"name":"internal carotid artery, spontaneous dissection of","type":"exact"}],"termid":"MONDO:0007840","xrefs":{"Monarch":{"xref_id":"0007840"}}}


id: FYPO:0005345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins during interphase of the cell cycle.","definition_xrefs":["PomBase:mah","PMID:9808627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"},{"relation_name":"is_a","term_name":"mitotic sister chromatid separation in absence of mitotic spindle","termid":"FYPO:0007125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"mitotic sister chromatid separation during interphase","synonyms":[{"name":"advanced mitotic sister chromatid separation during interphase","type":"exact"},{"name":"chromosome separation during interphase during vegetative growth","type":"exact"},{"name":"mitotic chromosome separation during interphase","type":"exact"},{"name":"premature mitotic sister chromatid separation during interphase","type":"exact"},{"name":"premature sister chromatid separation during interphase of mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005345"}


id: GO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the optic lobe placode. In Drosophila, for example, the placode appears in the dorsolateral region of the head in late stage 11 embryos and is the precursor to the larval visual system.","definition_xrefs":["PMID:8402833","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"insect visual primordium development","termid":"GO:0001748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium formation","secondary_identifiers":["GO:0007457"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor formation","type":"exact"},{"name":"optic lobe placode formation","type":"exact"}],"termid":"GO:0001744"}


id: GO:0062051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions to transport lipopolysaccharide from its site of synthesis at the cytoplasmic membrane across the periplasm to the outer membrane in an ATP-dependent manner.","definition_xrefs":["PMID:29449493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipopolysaccharide transport system","termid":"GO:0062051"}


id: FYPO:0007126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation that takes place as part of mitotic spindle assembly, and which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PomBase:mah","PMID:31615768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule bundle formation during mitotic spindle assembly","synonyms":[{"name":"abnormal microtubule array formation during mitotic spindle assembly","type":"related"},{"name":"abnormal microtubule bundle formation in spindle during mitotic prophase","type":"related"},{"name":"abnormal microtubule bundle formation involved in mitotic spindle assembly","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during prophase","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during spindle assembly","type":"related"}],"termid":"FYPO:0007126"}


id: MONDO:0011146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pallister-Killian syndrome (PKS) is a rare multiple congenital anomaly/intellectual deficit syndrome caused by mosaic tissue-limited tetrasomy for chromosome 12p.","definition_xrefs":["Orphanet:884"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 12","termid":"MONDO:0016933"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 12p","secondary_identifiers":["NORD:1546","GARD:8421","UMLS:C0265449","MEDGEN:120540","NCIT:C75458","MESH:C538105","OMIM:601803","ICD9:758.81","SCTID:9527009"],"synonyms":[{"name":"Hexasomy 12P, Mosaic","type":"related"},{"name":"Isochromosome 12P syndrome","type":"related"},{"name":"Isochromosome 12p mosaicism","type":"exact"},{"name":"Isochromosome 12p syndrome","type":"exact"},{"name":"Killian Teschler-Nicola syndrome","type":"related"},{"name":"Killian syndrome","type":"related"},{"name":"PKS","type":"related"},{"name":"Pallister Killian Mosaic Syndrome","type":"exact"},{"name":"Pallister Killian syndrome","type":"related"},{"name":"Pallister mosaic syndrome","type":"related"},{"name":"Pallister-Killian mosaic syndrome","type":"related"},{"name":"Pallister-Killian syndrome","type":"exact"},{"name":"Pallister-Killian syndrome, Somatic mosaicism","type":"exact"},{"name":"Teschler-Nicola Killian syndrome","type":"related"},{"name":"chromosome 12, Isochromosome 12p syndrome","type":"related"},{"name":"tetrasomy 12P, Mosaic","type":"related"},{"name":"tetrasomy type 12p","type":"exact"}],"termid":"MONDO:0011146","xrefs":{"Monarch":{"xref_id":"0011146"}}}


id: PATO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tonicity which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tonicity","synonyms":[{"name":"low tonicity","type":"exact"}],"termid":"PATO:0001619"}


id: PBO:0085866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Torpedo californica tCTL1p, which is postulated to be a choline transporter, neither null mutation nor overexpression affects choline transport","termid":"PBO:0085866"}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: PBO:0108539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 202","termid":"PBO:0108539"}


id: PBO:0044894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 7","termid":"PBO:0044894"}


id: PBO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uner Tan Syndrome","termid":"PBO:0036373"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["MFOMD:0000013","MESH:D003866","MEDGEN:4229","DOID:1596","ICD10CM:F32","UMLS:C0011581","SCTID:35489007","ICD9:311"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: GO:0120241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17.","definition_xrefs":["EC:3.5.99.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-iminobutanoate/2-iminopropanoate deaminase","synonyms":[{"name":"2-iminobutanoate deaminase","type":"narrow"},{"name":"2-iminopropanoate deaminase","type":"narrow"},{"name":"enamine/imine deaminase","type":"broad"},{"name":"imine intermediate deaminase activity","type":"related"}],"termid":"GO:0120241"}


id: GO:0051495
data:
  {"annotated_genes":["SJAG_04776","SJAG_04597","SJAG_03936","SJAG_00082","SJAG_03581","SJAG_02332","SJAG_04312","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[89955,94381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[113381,94551,94382,110538,87488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[111452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"positively_regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02332":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04312":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cytoskeleton organization","type":"narrow"},{"name":"positive regulation of cytoskeleton organisation","type":"exact"},{"name":"positive regulation of cytoskeleton organization and biogenesis","type":"related"},{"name":"stimulation of cytoskeleton organization","type":"narrow"},{"name":"up regulation of cytoskeleton organization","type":"exact"},{"name":"up-regulation of cytoskeleton organization","type":"exact"},{"name":"upregulation of cytoskeleton organization","type":"exact"}],"termid":"GO:0051495","terms_by_termid":{"GO:0031117":null,"GO:0110161":null,"GO:1903473":null,"GO:1903501":null}}


id: MONDO:0005600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian adenocarcinoma (obsolete MONDO:0005600)","termid":"MONDO:0005600","xrefs":{"Monarch":{"xref_id":"0005600"}}}


id: PBO:0092033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine (uga), mitochondrial","termid":"PBO:0092033"}


id: GO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877312"],"synonyms":[{"name":"regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"regulation of immune interferon signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060334"}


id: PBO:0041853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 3","termid":"PBO:0041853"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: PBO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light pseudogene 1","termid":"PBO:0060842"}


id: PBO:0081510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 416","termid":"PBO:0081510"}


id: PBO:0067947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 249","termid":"PBO:0067947"}


id: PBO:0059753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 27","termid":"PBO:0059753"}


id: GO:0103064
data:
  {"annotated_genes":["SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95705],"is_not":false,"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP-alpha-D-mannose = an alpha-D-mannosyl-(1,6)-1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP + H+.","definition_xrefs":["GOC:pz","RHEA:64596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.1.370","MetaCyc:RXN3O-663"],"termid":"GO:0103064","terms_by_termid":{"GO:0103064":null}}


id: MOD:01140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two iodine atoms.","definition_xrefs":["PubMed:15627961","Unimod:130#Y","OMSSA:35","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated residue","termid":"MOD:00501"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated tyrosine","synonyms":[{"name":"3,5-Diiodination (of Tyrosine)","type":"exact"},{"name":"Diiodo","type":"related"},{"name":"I2Tyr","type":"exact"},{"name":"di-Iodination","type":"related"},{"name":"diiodinationy","type":"exact"}],"termid":"MOD:01140"}


id: MONDO:0011543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete BRCA3 (obsolete MONDO:0011543)","secondary_identifiers":["OMIM:605365","MESH:C565336"],"synonyms":[{"name":"BRCA3","type":"exact"},{"name":"Brcax","type":"related"},{"name":"breast cancer 3","type":"related"},{"name":"moved to 114480","type":"related"}],"termid":"MONDO:0011543","xrefs":{"Monarch":{"xref_id":"0011543"}}}


id: MONDO:0004902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"interstitial keratitis","secondary_identifiers":["UMLS:C0155088","DOID:9857","ICD9:370.50","MEDGEN:509779"],"termid":"MONDO:0004902","xrefs":{"Monarch":{"xref_id":"0004902"}}}


id: GO:0102869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 6-hydroxyflavone = 6-O-beta-D-glucosyl-6-hydroxyflavone + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxyflavone-glucosyltransferase activity (obsolete GO:0102869)","termid":"GO:0102869"}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: MONDO:0018522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acinar cell carcinoma of pancreas (obsolete MONDO:0018522)","termid":"MONDO:0018522","xrefs":{"Monarch":{"xref_id":"0018522"}}}


id: PBO:0040992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 2","termid":"PBO:0040992"}


id: PBO:0052657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 25","termid":"PBO:0052657"}


id: GO:2000658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of apolipoprotein binding (obsolete GO:2000658)","termid":"GO:2000658"}


id: MONDO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"phlyctenulosis","secondary_identifiers":["DOID:11581","ICD9:370.31","UMLS:C0155080","MEDGEN:509775","SCTID:67895005"],"synonyms":[{"name":"Phlyctenular keratoconjunctivitis","type":"exact"},{"name":"strumous ophthalmia","type":"exact"}],"termid":"MONDO:0001317","xrefs":{"Monarch":{"xref_id":"0001317"}}}


id: PBO:0066250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 3","termid":"PBO:0066250"}


id: PBO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spherical_vegetative_cell","termid":"PBO:0030789"}


id: MONDO:0017148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heritable pulmonary arterial hypertension (HPAH) is a form of pulmonary arterial hypertension (PAH), occurring due to mutations in PAH predisposing genes or in a familial context. HPAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. HPAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable pulmonary arterial hypertension","secondary_identifiers":["MEDGEN:90953","NANDO:2201047","SCTID:697897003","UMLS:C0340543","GARD:11914","NCIT:C121945","OMIMPS:178600"],"synonyms":[{"name":"FPAH","type":"exact"},{"name":"HPAH","type":"exact"},{"name":"HpaH","type":"exact"},{"name":"familial pulmonary arterial hypertension","type":"exact"},{"name":"hereditary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017148","xrefs":{"Monarch":{"xref_id":"0017148"}}}


id: FYPO:0004889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to telomere","termid":"FYPO:0004888"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to telomere during meiotic cell cycle","synonyms":[{"name":"abolished protein localisation to chromosome, telomeric region, during meiotic cell cycle","type":"exact"},{"name":"abolished protein localisation to telomere during meiotic cell cycle","type":"exact"},{"name":"abolished protein localization to chromosome, telomeric region, during meiotic cell cycle","type":"exact"},{"name":"protein absent from telomere during meiotic cell cycle","type":"related"},{"name":"protein localization to telomere abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004889"}


id: GO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transition from a cell in the S phase to the G2 phase.","definition_xrefs":["GOC:hjd","GOC:mtg_cell_cycle","PMID:15161931"],"gene_count":0,"genotype_count":0,"name":"obsolete S/G2 transition of mitotic cell cycle (obsolete GO:0002198)","synonyms":[{"name":"S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0002198"}


id: PBO:0054313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1705","termid":"PBO:0054313"}


id: GO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage cytokine production","termid":"GO:0060907"}


id: GO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell deletion","termid":"GO:0002869"},{"relation_name":"is_a","term_name":"positive regulation of central B cell tolerance induction","termid":"GO:0002897"},{"relation_name":"is_a","term_name":"regulation of central B cell deletion","termid":"GO:0002898"},{"relation_name":"is_a","term_name":"positive regulation of B cell differentiation","termid":"GO:0045579"},{"relation_name":"positively_regulates","term_name":"central B cell deletion","termid":"GO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central B cell deletion","synonyms":[{"name":"activation of central B cell deletion","type":"narrow"},{"name":"stimulation of central B cell deletion","type":"narrow"},{"name":"up regulation of central B cell deletion","type":"exact"},{"name":"up-regulation of central B cell deletion","type":"exact"},{"name":"upregulation of central B cell deletion","type":"exact"}],"termid":"GO:0002900"}


id: GO:0008018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete structural protein of chorion (sensu Drosophila) (obsolete GO:0008018)","synonyms":[{"name":"structural protein of chorion (sensu Drosophila)","type":"exact"}],"termid":"GO:0008018"}


id: GO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specialized resting state that cells enter in response to cues from the cell's environment. Quiescence is characterized by the absence of cell growth and division, by a reprogramming of global gene expression, and by changes characteristic of the organism and specific cell type. Depending on external conditions, quiescence may persist until cell death or cells may resume cell growth and division. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["GOC:jb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell quiescence","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cell cycle quiescence","type":"related"},{"name":"cellular quiescence","type":"exact"},{"name":"quiescence","type":"broad"}],"termid":"GO:0044838"}


id: MONDO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Criss cross heart (CCH) is a cardiac malformation where the inflow streams of the two ventricles cross due to twisting of the heart about its major axis. The clinical features depend on the particular cardiac defects associated, like simple or corrected transposition of the great arteries and ventricular septal defects.","definition_xrefs":["Orphanet:1461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"criss-cross heart","secondary_identifiers":["ICD9:746.89","MEDGEN:8181","MESH:D003420","SCTID:253269002","UMLS:C0010334","GARD:18724"],"synonyms":[{"name":"criss-cross atrioventricular relationships","type":"exact"},{"name":"superoinferior ventricles","type":"exact"},{"name":"twisted atrioventricular connections","type":"exact"}],"termid":"MONDO:0015449","xrefs":{"Monarch":{"xref_id":"0015449"}}}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: GO:1900583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid catabolic process","synonyms":[{"name":"o-orsellinic acid breakdown","type":"exact"},{"name":"o-orsellinic acid catabolism","type":"exact"},{"name":"o-orsellinic acid degradation","type":"exact"}],"termid":"GO:1900583"}


id: PBO:0081943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ribbon domain containing 2","termid":"PBO:0081943"}


id: FYPO:0004128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type peptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cysteine-type peptidase activity","synonyms":[{"name":"abnormal caspase activity","type":"narrow"},{"name":"abnormal cysteine protease activity","type":"exact"}],"termid":"FYPO:0004128"}


id: _global:directly_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulated_by","secondary_identifiers":["RO:0002022"],"termid":"_global:directly_regulated_by"}


id: PBO:0042773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 83","termid":"PBO:0042773"}


id: MONDO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","secondary_identifiers":["Orphanet:268843"],"termid":"MONDO:0017085","xrefs":{"Monarch":{"xref_id":"0017085"}}}


id: PBO:0082814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ER protein translocation channel; essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p); forms channel for SRP-dependent protein import; with Sec63 complex is required for SRP-independent protein translocation into the ER; involved in posttranslational soluble protein import into the ER, ERAD of soluble substrates, and misfolded soluble protein export from the ER","termid":"PBO:0082814"}


id: PBO:0083327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SRC1/YML034W","termid":"PBO:0083327"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: GO:0015280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel activity","termid":"GO:0005272"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ligand-gated sodium channel activity","secondary_identifiers":["Reactome:R-HSA-2672334"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"narrow"},{"name":"epithelial sodium channel","type":"narrow"}],"termid":"GO:0015280"}


id: PBO:0059864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 1","termid":"PBO:0059864"}


id: PBO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030338"}


id: GO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a cell in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11123917","PMID:23230295","PMID:22992735","PMID:26633512","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated killing of host cell","secondary_identifiers":["Reactome:R-HSA-9637698"],"synonyms":[{"name":"killing by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001907"}


id: FYPO:0004452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased following a calcium ion stimulus.","definition_xrefs":["PMID:25081204","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"decreased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to calcium ion","type":"exact"}],"termid":"FYPO:0004452"}


id: GO:0150146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell junction into its constituent components.","definition_xrefs":["GOC:aruk","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction disassembly","termid":"GO:0150146"}


id: FYPO:0000687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}


id: PATO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000731 body position value (obsolete PATO:0000731)","termid":"PATO:0000731"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0047185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member A","termid":"PBO:0047185"}


id: GO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral process by which enveloped viruses acquire a host-derived membrane enriched in viral proteins to form their external envelope. The process starts when nucleocapsids, assembled or in the process of being built, induce formation of a membrane curvature in the host plasma or organelle membrane and wrap up in the forming bud. The process ends when the bud is eventually pinched off by membrane scission to release the enveloped particle into the lumenal or extracellular space.","definition_xrefs":["VZ:1947","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding","secondary_identifiers":["GO:0046744"],"synonyms":[{"name":"viral capsid envelopment","type":"related"},{"name":"virion budding","type":"narrow"},{"name":"virus budding","type":"related"}],"termid":"GO:0046755"}


id: MONDO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of Wilms tumor of the kidney characterized by the presence of cystic spaces separated by septa. The septa contain immature epithelial cells, immature stromal cells, and blastema cells. Surgical resection is usually curative.","definition_xrefs":["NCIT:C6897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"childhood multilocular cystic kidney neoplasm","termid":"MONDO:0004356"},{"relation_name":"is_a","term_name":"childhood kidney Wilms tumor","termid":"MONDO:0024676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"cystic partially differentiated nephroblastoma","secondary_identifiers":["MEDGEN:220423","UMLS:C1266139","ICDO:8959/1","ICDO:8959/3","DOID:7571"],"synonyms":[{"name":"cystic partially differentiated nephroblastoma","type":"exact"},{"name":"malignant cystic nephroma","type":"exact"},{"name":"malignant multilocular cystic nephroma","type":"exact"}],"termid":"MONDO:0030604","xrefs":{"Monarch":{"xref_id":"0030604"}}}


id: PATO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity.","definition_xrefs":["PATOC:NI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level with","termid":"PATO:0002443"}


id: GO:0005745
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75757],"is_not":false,"summary":null,"term":"GO:0005745"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane that is involved in mitochondrial protein turnover and in processing of proteins imported into mitochondria.","definition_xrefs":["PMID:21147776","GOC:mcc","PMID:12417197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"m-AAA complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005745","terms_by_termid":{"GO:0005745":null}}


id: PBO:0046467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ES cell expressed Ras","termid":"PBO:0046467"}


id: GO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methanol oxidase activity (obsolete GO:0046563)","termid":"GO:0046563"}


id: PBO:0054319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1711","termid":"PBO:0054319"}


id: MONDO:0023072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete envenomization by Bothrops lanceolatus (obsolete MONDO:0023072)","secondary_identifiers":["Orphanet:1939"],"synonyms":[{"name":"Envenomization by the Martinique lancehead viper","type":"related"}],"termid":"MONDO:0023072","xrefs":{"Monarch":{"xref_id":"0023072"}}}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:14609719","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: GO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-19 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-19 receptor activity","synonyms":[{"name":"IL-19 receptor activity","type":"exact"},{"name":"IL-19R","type":"exact"}],"termid":"GO:0042014"}


id: PBO:0056774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 24","termid":"PBO:0056774"}


id: MONDO:0014414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"},{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"STAT3-related early-onset multisystem autoimmune disease","secondary_identifiers":["Orphanet:438159","MEDGEN:863232","NCIT:C157123","OMIM:615952","GARD:17737","UMLS:C4014795"],"synonyms":[{"name":"ADMIO","type":"related"},{"name":"ADMIO1","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset, 1","type":"related"}],"termid":"MONDO:0014414","xrefs":{"Monarch":{"xref_id":"0014414"}}}


id: MONDO:0016414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by hypotrichosis, syndactyly, intellectual deficit and early eruption of teeth. It has been described in two patients. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2266"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis-intellectual disability, Lopes type","secondary_identifiers":["MEDGEN:1371854","UMLS:C4509839","GARD:18763"],"synonyms":[{"name":"Lopes-Marques de Faria syndrome","type":"exact"}],"termid":"MONDO:0016414","xrefs":{"Monarch":{"xref_id":"0016414"}}}


id: PBO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0036163"}


id: PATO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000388 intensity value (obsolete PATO:0000388)","termid":"PATO:0000388"}


id: PBO:0071052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 54","termid":"PBO:0071052"}


id: PBO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long,_thick_stable_microtubule_bundle","termid":"PBO:0034516"}


id: GO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing monoamines.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle","type":"exact"}],"termid":"GO:0070081"}


id: GO:0051010
data:
  {"annotated_genes":["SJAG_02040","SJAG_02045","SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65213,68523,70473,79857],"is_not":false,"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to the plus end of a microtubule.","definition_xrefs":["PMID:14614826","GOC:ai","PMID:14557818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02040":null,"SJAG_02045":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008017","GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"microtubule plus-end binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0051010","terms_by_termid":{"GO:0051010":null}}


id: PBO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body_organization","termid":"PBO:0033755"}


id: PBO:0049572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 9","termid":"PBO:0049572"}


id: GO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["RESID:AA0249"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA-protein covalent cross-linking via peptidyl-tyrosine (obsolete GO:0018148)","termid":"GO:0018148"}


id: FYPO:0005669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: MONDO:0007671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary kidney disease characterized by proteinuria, type IV renal tubular acidosis, microscopic hematuria and hypertension that may lead to end-stage renal failure in the second to sixth decade of life.","definition_xrefs":["Orphanet:84090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"fibronectin glomerulopathy","secondary_identifiers":["MESH:C562900","OMIMPS:137950","NANDO:2200133","MESH:C536826","GARD:15019","SCTID:236535001","icd11.foundation:1877494378","MEDGEN:854773","UMLS:C3888104"],"synonyms":[{"name":"GFND","type":"exact"},{"name":"GFND1","type":"related"},{"name":"GFND2","type":"related"},{"name":"fibronectin glomerulopathy","type":"exact"},{"name":"glomerular nephritis, familial, with fibronectin deposits","type":"related"},{"name":"glomerulopathy with fibronectin deposits","type":"exact"},{"name":"glomerulopathy with fibronectin deposits 1","type":"related"},{"name":"glomerulopathy with fibronectin deposits 2","type":"related"},{"name":"glomerulopathy with giant fibrillar deposits","type":"related"},{"name":"lobular glomerulopathy, familial","type":"related"}],"termid":"MONDO:0007671","xrefs":{"Monarch":{"xref_id":"0007671"}}}


id: MONDO:0011180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broad terminal phalanges, familial","secondary_identifiers":["MESH:C566588","OMIM:602071","UMLS:C1865923","MEDGEN:400879"],"synonyms":[{"name":"broad terminal phalanges, familial","type":"exact"}],"termid":"MONDO:0011180","xrefs":{"Monarch":{"xref_id":"0011180"}}}


id: GO:0016916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Either of two glycoproteins (designated A and B), secreted by the gonads and present in seminal plasma and follicular fluid, that inhibit pituitary production of follicle-stimulating hormone.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibin (obsolete GO:0016916)","synonyms":[{"name":"inhibin","type":"exact"}],"termid":"GO:0016916"}


id: PBO:0089832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Vps901","termid":"PBO:0089832"}


id: PBO:0027212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_amino_acid_biosynthesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027212"}


id: GO:0097218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"sieve plate","termid":"GO:0097218"}


id: MONDO:0032684
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86033],"is_not":false,"summary":null,"term":"MONDO:0032684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, genital anomalies, and immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193036","OMIM:618336","MEDGEN:1684464"],"synonyms":[{"name":"IMAGE-I syndrome","type":"exact"},{"name":"IMAGEI","type":"related"},{"name":"INTRAUTERINE GROWTH RETARDATION, METAPHYSEAL DYSPLASIA, ADRENAL HYPOPLASIA CONGENITA, GENITAL ANOMALIES, AND IMMUNODEFICIENCY","type":"related"},{"name":"Imagei Syndrome","type":"related"}],"termid":"MONDO:0032684","terms_by_termid":{"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0032684"}}}


id: PATO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001092 flux value (obsolete PATO:0001092)","termid":"PATO:0001092"}


id: PBO:0040930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 1","termid":"PBO:0040930"}


id: GO:0015866
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74509],"is_not":false,"summary":null,"term":"GO:0015866"},{"annotations":[58938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The directed movement of ADP, adenosine diphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ADP transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015866","terms_by_termid":{"GO:0015866":null,"GO:0140021":null}}


id: FYPO:0007455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via single-strand annealing is increased.","definition_xrefs":["GO:0045002","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0000293"],"is_obsolete":false,"name":"increased double-strand break repair via single-strand annealing","synonyms":[{"name":"increased double-strand break repair via SSA","type":"exact"},{"name":"increased double-strand break repair via single-strand annealing during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via single-strand annealing during vegetative growth","type":"exact"},{"name":"increased error-prone double strand break repair","type":"broad"}],"termid":"FYPO:0007455"}


id: GO:0008835
data:
  {"annotated_genes":["SJAG_01054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117199],"is_not":false,"summary":null,"term":"GO:0008835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O + H+ = 5-amino-6-(5-phosphoribosylamino)uracil + NH4.","definition_xrefs":["PMID:11889103","RHEA:21868","EC:3.5.4.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"diaminohydroxyphosphoribosylaminopyrimidine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008485","KEGG_REACTION:R03459","MetaCyc:RIBOFLAVINSYNDEAM-RXN"],"synonyms":[{"name":"2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate deaminase activity","type":"exact"},{"name":"2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine 2-aminohydrolase activity","type":"related"},{"name":"2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 2-aminohydrolase activity","type":"related"}],"termid":"GO:0008835","terms_by_termid":{"GO:0008835":null}}


id: FYPO:0003830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis checkpoint of a mitotic cell cycle is abnormal. The cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytokinesis checkpoint","synonyms":[{"name":"abnormal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"abnormal cytokinesis checkpoint activation","type":"related"},{"name":"abnormal mitotic cell cycle cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0003830"}


id: FYPO:0003527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the cell tip is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cell tip","synonyms":[{"name":"ectopic protein localization to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell end","type":"exact"},{"name":"protein mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003527"}


id: PBO:0031911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5 (predicted)","termid":"PBO:0031911"}


id: FYPO:0003560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is abnormal. Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal spindle pole body organization","synonyms":[{"name":"abnormal SPB organization","type":"exact"},{"name":"abnormal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0003560"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"positive regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120142"}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: GO:0009490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A mononuclear iron entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mononuclear iron electron carrier (obsolete GO:0009490)","synonyms":[{"name":"mononuclear iron electron carrier","type":"exact"}],"termid":"GO:0009490"}


id: RO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_in","termid":"RO:0001018"}


id: GO:1901817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-zeacarotene.","definition_xrefs":["PMID:3710717","UniPathway:UPA00805","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-zeacarotene catabolic process","synonyms":[{"name":"beta-zeacarotene breakdown","type":"exact"},{"name":"beta-zeacarotene catabolism","type":"exact"},{"name":"beta-zeacarotene degradation","type":"exact"}],"termid":"GO:1901817"}


id: PBO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (predicted)","termid":"PBO:0003679"}


id: PR:Q12701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A STE20/SPS1-related proline-alanine-rich protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.15c","secondary_identifiers":["UniProtKB:Q12701"],"synonyms":[{"name":"Spom972h-STK39","type":"exact"}],"termid":"PR:Q12701"}


id: GO:0050313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-sulfanylglutathione + O2 + H2O = sulfite + glutathione + 2 H+.","definition_xrefs":["EC:1.13.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfur dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1614605","RHEA:12981","MetaCyc:RXN-13161"],"synonyms":[{"name":"S-sulfanylglutathione:oxygen oxidoreductase activity","type":"related"},{"name":"sulfur oxygenase activity","type":"related"},{"name":"sulfur:oxygen oxidoreductase activity","type":"related"},{"name":"sulphur dioxygenase activity","type":"exact"}],"termid":"GO:0050313"}


id: PBO:0069899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1190, pseudogene","termid":"PBO:0069899"}


id: GO:0006614
data:
  {"annotated_genes":["SJAG_01282","SJAG_00360","SJAG_00959","SJAG_01840","SJAG_02456","SJAG_00064","SJAG_03411","SJAG_01558","SJAG_00175","SJAG_02208","SJAG_02330","SJAG_01759","SJAG_03684","SJAG_04129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66216,68766,69764,72866,94250],"is_not":false,"summary":null,"term":"GO:0006614"},{"annotations":[91596,114385,115155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[108326,98043,73119,73432,75360,102587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cotranslational protein targeting to membrane","termid":"GO:0006613"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01558":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006605"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1799339"],"synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-dependent cotranslational membrane targeting","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006614","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null}}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: PBO:0069986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1281, pseudogene","termid":"PBO:0069986"}


id: GO:0009147
data:
  {"annotated_genes":["SJAG_05024","SJAG_04665","SJAG_00533","SJAG_04487","SJAG_04657","SJAG_03676","SJAG_03708","SJAG_04627","SJAG_02887","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[67792,92937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[70727,68328,92407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[79425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[107275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[64537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00885":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009147","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null}}


id: PBO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Yml6 (predicted)","termid":"PBO:0004289"}


id: GO:0044808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of oncostatin M due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"oncostatin M production","synonyms":[{"name":"OSM production","type":"exact"}],"termid":"GO:0044808"}


id: PBO:0091850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript (predicted)","termid":"PBO:0091850"}


id: MONDO:0958354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in female","secondary_identifiers":["UMLS:C5816765","MEDGEN:1853156","Orphanet:650077"],"termid":"MONDO:0958354","xrefs":{"Monarch":{"xref_id":"0958354"}}}


id: MONDO:0020698
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional biotin deficiency","termid":"MONDO:0000461"},{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn error of biotin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0020698","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0020698"}}}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: PBO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 3 pseudogene","termid":"PBO:0062072"}


id: GO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters.","definition_xrefs":["PMID:11279013","PMID:15284901","PMID:16568949","GOC:krc","GOC:bf","PMID:10779516","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"NURF complex","synonyms":[{"name":"nucleosome remodeling factor complex","type":"exact"}],"termid":"GO:0016589"}


id: MONDO:0859212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus","secondary_identifiers":["MEDGEN:1794250","UMLS:C5562040","OMIM:619653"],"termid":"MONDO:0859212","xrefs":{"Monarch":{"xref_id":"0859212"}}}


id: PBO:0092013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine (ugu), mitochondrial","termid":"PBO:0092013"}


id: FYPO:0006252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the folding of tRNAs into the correct tertiary structure is abnormal. All tRNA folding may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0061818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA folding","synonyms":[{"name":"abnormal tRNA folding during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA folding during vegetative growth","type":"exact"}],"termid":"FYPO:0006252"}


id: MONDO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by bacteria that show up as pink (negative) when treated by the gram-staining method.","definition_xrefs":["MESH:D016905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gram-negative bacterial infections","secondary_identifiers":["ICD9:041.85","MEDGEN:88406","SCTID:371583007","UMLS:C0085423"],"synonyms":[{"name":"bacterial infection, gram-negative","type":"related"},{"name":"bacterial infections, gram negative","type":"related"},{"name":"bacterial infections, gram-negative","type":"related"},{"name":"bacterial infections, gramme negative","type":"related"},{"name":"gram negative bacterial infections","type":"related"},{"name":"gram-negative bacterial infection","type":"related"},{"name":"gramme negative bacterial infections","type":"related"},{"name":"infection, gram-negative bacterial","type":"related"},{"name":"infections, gram negative bacterial","type":"related"},{"name":"infections, gram-negative bacterial","type":"related"},{"name":"infections, gramme negative bacterial","type":"related"}],"termid":"MONDO:0021678","xrefs":{"Monarch":{"xref_id":"0021678"}}}


id: GO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin sulfate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}


id: PBO:0051021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 1","termid":"PBO:0051021"}


id: PBO:0075605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: SO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_methyladenosine","secondary_identifiers":["RNAMOD:005"],"synonyms":[{"name":"2-methylthio-N6-methyladenosine","type":"exact"},{"name":"ms2m6A","type":"exact"},{"name":"two methylthio N6 methyladenosine","type":"exact"}],"termid":"SO:0001299"}


id: GO:0009083
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70895"],"synonyms":[{"name":"branched chain family amino acid breakdown","type":"exact"},{"name":"branched chain family amino acid catabolic process","type":"exact"},{"name":"branched chain family amino acid catabolism","type":"exact"},{"name":"branched chain family amino acid degradation","type":"exact"}],"termid":"GO:0009083","terms_by_termid":{"GO:0006574":null}}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: PBO:0058787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7156","termid":"PBO:0058787"}


id: PBO:0027400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triglyceride_biosynthetic_process","termid":"PBO:0027400"}


id: PBO:0050039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 7 (pseudogene)","termid":"PBO:0050039"}


id: PR:P05764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03124","PANTHER:PTHR10442:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.06","secondary_identifiers":["UniProtKB:P05764"],"synonyms":[{"name":"S28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPS21","type":"exact"}],"termid":"PR:P05764"}


id: PBO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000041"}


id: PBO:0086653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YOR292C is not an essential gene","termid":"PBO:0086653"}


id: GO:1902085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumagillin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"fumagillin catabolic process","synonyms":[{"name":"fumagillin breakdown","type":"exact"},{"name":"fumagillin catabolism","type":"exact"},{"name":"fumagillin degradation","type":"exact"}],"termid":"GO:1902085"}


id: FYPO:0004961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is increased.","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at replication origin","synonyms":[{"name":"increased protein localisation to chromatin at replication origin","type":"exact"},{"name":"increased protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0004961"}


id: PBO:0063932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pim-1 proto-oncogene, serine/threonine kinase","termid":"PBO:0063932"}


id: GO:0004105
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69719],"is_not":false,"summary":null,"term":"GO:0004105"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline.","definition_xrefs":["EC:2.7.7.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.7.7.15-RXN","Reactome:R-HSA-1483081","RHEA:18997"],"synonyms":[{"name":"CDP-choline pyrophosphorylase activity","type":"related"},{"name":"CDP-choline synthetase activity","type":"related"},{"name":"CTP-phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:choline-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"choline phosphate cytidylyltransferase activity","type":"related"},{"name":"cytidine diphosphocholine pyrophosphorylase activity","type":"related"},{"name":"phosphocholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine transferase activity","type":"related"},{"name":"phosphorylcholine:CTP cytidylyltransferase activity","type":"related"}],"termid":"GO:0004105","terms_by_termid":{"GO:0004105":null}}


id: PBO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 2","termid":"PBO:0044051"}


id: PBO:0040959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 30","termid":"PBO:0040959"}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: GO:0106006
data:
  {"annotated_genes":["SJAG_00368","SJAG_04077","SJAG_00152","SJAG_04479","SJAG_03564","SJAG_00268","SJAG_03264","SJAG_00397","SJAG_03673","SJAG_02737","SJAG_00700","SJAG_03596","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92559,99327,102427,102746,102969,106218,106607,111887,112323,112786,113967,116974,117062],"is_not":false,"summary":null,"term":"GO:0106006"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a cytoskeletal protein or protein complex and a plasma membrane lipid or membrane-associated protein, in order to maintain the localization of the cytoskeleton at a specific cortical membrane location.","definition_xrefs":["PMID:30840879","PMID:25736293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal anchor activity","termid":"GO:0008093"},{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00268":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_02737":null,"SJAG_03264":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03673":null,"SJAG_04077":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008093"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0008093","GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"cytoskeletal protein-membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0140362"],"synonyms":[{"name":"BAR domain adaptor","type":"narrow"},{"name":"F-BAR domain adaptor","type":"narrow"},{"name":"cytoskeletal protein membrane adaptor","type":"broad"},{"name":"cytoskeletal protein membrane anchor activity","type":"broad"},{"name":"cytoskeletal protein membrane tether activity","type":"broad"},{"name":"cytoskeletal protein to membrane recruiting activity","type":"exact"},{"name":"cytoskeletal protein-membrane adaptor activity","type":"broad"},{"name":"membrane-cytoskeletal protein anchor activity","type":"broad"},{"name":"membrane-cytoskeletal protein tether activity","type":"broad"},{"name":"microtubule cortical anchor activity","type":"narrow"}],"termid":"GO:0106006","terms_by_termid":{"GO:0106006":null}}


id: MONDO:0100210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone insensitivity syndrome with immune dysregulation","secondary_identifiers":["OMIMPS:245590"],"termid":"MONDO:0100210","xrefs":{"Monarch":{"xref_id":"0100210"}}}


id: GO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity","secondary_identifiers":["GO:0060181"],"synonyms":[{"name":"female receptivity","type":"related"}],"termid":"GO:0045924"}


id: GO:0097003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are protein or peptide hormones that are important for sugar and fat homeostasis in metazoa. In insects, they mobilize sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["PMID:11904407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"adipokinetic hormone receptor activity","synonyms":[{"name":"AKH receptor activity","type":"exact"}],"termid":"GO:0097003"}


id: MONDO:0012223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, progressive patterned scalp, with wiry hair, onycholysis, and cleft lip/palate","secondary_identifiers":["OMIM:609250","UMLS:C1836521","MEDGEN:324538","MESH:C563765"],"synonyms":[{"name":"Marie Unna-like scalp hypotrichosis","type":"related"},{"name":"hypotrichosis, progressive patterned scalp, with wiry hair, onycholysis, and cleft lip/palate","type":"exact"}],"termid":"MONDO:0012223","xrefs":{"Monarch":{"xref_id":"0012223"}}}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: MONDO:0016798
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011835"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"ataxia neuropathy spectrum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3683791","MEDGEN:777176","GARD:20759","MESH:C579922","Orphanet:254818"],"termid":"MONDO:0016798","terms_by_termid":{"MONDO:0011835":null},"xrefs":{"Monarch":{"xref_id":"0016798"}}}


id: MONDO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial osteosclerosis","termid":"MONDO:0042973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial osteomalacia","secondary_identifiers":["UMLS:C1862372","OMIM:109130","MESH:C537791","MEDGEN:354730","DOID:0080039"],"synonyms":[{"name":"atypical osteomalacia involving the axial skeleton","type":"related"},{"name":"axial osteomalacia","type":"exact"}],"termid":"MONDO:0007181","xrefs":{"Monarch":{"xref_id":"0007181"}}}


id: GO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ether stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ether","synonyms":[{"name":"behavioural response to ether","type":"exact"}],"termid":"GO:0048150"}


id: GO:0106266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trihydroxyphenylhexan-1-one + chloride + FADH2 + O2 = (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + H+ + 2 H2O.","definition_xrefs":["RHEA:64356","PMID:20231486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-chloro THPH synthase activity","termid":"GO:0106266"}


id: PBO:0040934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 5","termid":"PBO:0040934"}


id: PBO:0054643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2048","termid":"PBO:0054643"}


id: PBO:0073438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFI1 centrin binding protein","termid":"PBO:0073438"}


id: _global:has_output
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","secondary_identifiers":["RO:0002234"],"termid":"_global:has_output"}


id: GO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"serotonin binding","synonyms":[{"name":"5-hydroxytryptamine binding","type":"exact"}],"termid":"GO:0051378"}


id: FYPO:0001071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal transport","synonyms":[{"name":"normal transport during mitotic cell cycle","type":"related"},{"name":"normal transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001071"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["PMID:14699587","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: PBO:0055525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2959","termid":"PBO:0055525"}


id: PBO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin (predicted)","termid":"PBO:0036527"}


id: PBO:0052992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 4","termid":"PBO:0052992"}


id: FYPO:0003691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-demethoxyubiquinone-10 ()2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone, an intermediate in ubiquinone biosynthesis) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 5-demethoxyubiquinone-10 level","synonyms":[{"name":"increased 5-demethoxyubiquinone-10 accumulation","type":"related"},{"name":"increased cellular 2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone level","type":"exact"},{"name":"increased cellular 5-demethoxyubiquinone-10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular 5-demethoxyubiquinone-10 level during vegetative growth","type":"exact"},{"name":"increased cellular demethoxyubiquinone-10 level","type":"broad"}],"termid":"FYPO:0003691"}


id: FYPO:0002197
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119504,119493,119498,119530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119428,119434,119427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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