# terms

id: PR:O74882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase cytochrome b560 subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04199","PANTHER:PTHR10978:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase cytochrome B subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.12c","secondary_identifiers":["UniProtKB:O74882"],"synonyms":[{"name":"Spom972h-SDHC","type":"exact"}],"termid":"PR:O74882"}


id: MONDO:0008033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant limb-girdle muscular dystrophy type 1B (LGMD1B) is a subtype of autosomal dominant limb girdle muscular dystrophy characterized by a variable age of onset of progressive shoulder and hip girdle weakness, with inferior limbs usually being affected prior to upper limbs, and mild joint contractures. LGMD1B is also associated with cardiac dysrhythmias, including atrioventricular conduction blocks, and late-onset dilated cardiomyopathy, that may lead to sudden death.","definition_xrefs":["Orphanet:264"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1B (obsolete MONDO:0008033)","termid":"MONDO:0008033","xrefs":{"Monarch":{"xref_id":"0008033"}}}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: MONDO:0100264
data:
  {"annotated_genes":["SJAG_01165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX10 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX10 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX10 defect","type":"exact"}],"termid":"MONDO:0100264","terms_by_termid":{"MONDO:0013936":null,"MONDO:0013937":null},"xrefs":{"Monarch":{"xref_id":"0100264"}}}


id: GO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenomedullin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adrenomedullin receptor binding","synonyms":[{"name":"adrenomedullin receptor ligand","type":"narrow"}],"termid":"GO:0031700"}


id: MONDO:1012170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, sheep","secondary_identifiers":["OMIA:000662-9940"],"termid":"MONDO:1012170","xrefs":{"Monarch":{"xref_id":"1012170"}}}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.6-RXN","EC:6.3.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0140101","GO:0016874"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)","RHEA:14513"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: PBO:0050551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papillomavirus (type 6a) integration site 1","termid":"PBO:0050551"}


id: GO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"ligase inhibitor activity","termid":"GO:0055104"}


id: MONDO:0021037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neurodegenerative disease with dementia that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic neurodegenerative disease with dementia (obsolete MONDO:0021037)","secondary_identifiers":["Orphanet:276058"],"synonyms":[{"name":"genetic neurodegenerative disease with dementia","type":"exact"}],"termid":"MONDO:0021037","xrefs":{"Monarch":{"xref_id":"0021037"}}}


id: MONDO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 83","secondary_identifiers":["OMIM:619808","UMLS:C5676951","MEDGEN:1812664"],"synonyms":[{"name":"DFNA83","type":"exact"},{"name":"deafness, autosomal dominant 83","type":"narrow"}],"termid":"MONDO:0030723","xrefs":{"Monarch":{"xref_id":"0030723"}}}


id: PBO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 2","termid":"PBO:0048621"}


id: GO:0052736
data:
  {"annotated_genes":["SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62031,69290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of linkages in beta-D-glucans; beta-glucans are polysaccharides of D-glucose monomers linked by beta-glycosidic bonds.","definition_xrefs":["Wikipedia:Beta-glucan"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"beta-glucanase activity","references_by_uniquename":{"GO_REF:0000003":null},"synonyms":[{"name":"beta-D-glucanase activity","type":"exact"}],"termid":"GO:0052736","terms_by_termid":{"GO:0052861":null}}


id: MONDO:1012588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese raccoon dog due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese raccoon dog","secondary_identifiers":["OMIA:000202-476259"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Nyctereutes procyonoides viverrinus (Japanese raccoon dog)","type":"exact"}],"termid":"MONDO:1012588","xrefs":{"Monarch":{"xref_id":"1012588"}}}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["UMLS:C5676970","MEDGEN:1810905","OMIM:619845"],"synonyms":[{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: FYPO:0005465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cell polarity","synonyms":[{"name":"normal cell polarity during mitotic cell cycle","type":"related"},{"name":"normal cell polarity during vegetative growth","type":"exact"},{"name":"normal cell polarity process","type":"exact"},{"name":"normal establishment or maintenance of cell polarity","type":"exact"}],"termid":"FYPO:0005465"}


id: PR:C6Y4B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.12 gene.","definition_xrefs":["UniProtKB:C6Y4B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein SPAC212.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.12","synonyms":[{"name":"Spom972h-SPAC212.12","type":"exact"}],"termid":"PR:C6Y4B5"}


id: FYPO:0005625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability following cellular response to UV","termid":"FYPO:0004662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability following cellular response to UV during mitotic S phase","synonyms":[{"name":"normal cell population viability following cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal viability following UV exposure during mitotic S phase","type":"exact"},{"name":"normal viability following cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005625"}


id: MONDO:0005496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the bile duct","direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct carcinoma","secondary_identifiers":["UMLS:C0740277","NCIT:C27814","DOID:4897","EFO:0005540","MEDGEN:152840"],"synonyms":[{"name":"bile duct cancer","type":"broad"},{"name":"bile duct cancer (including cholangiocarcinoma)","type":"exact"},{"name":"bile duct carcinoma","type":"exact"},{"name":"carcinoma of bile duct","type":"exact"}],"termid":"MONDO:0005496","xrefs":{"Monarch":{"xref_id":"0005496"}}}


id: MONDO:0013921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the TICAM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 4","secondary_identifiers":["UMLS:C3553869","MEDGEN:766783","OMIM:614850"],"synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, type 4","type":"exact"},{"name":"IIAE6","type":"related"},{"name":"TICAM1 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 6","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in TICAM1","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0013921","xrefs":{"Monarch":{"xref_id":"0013921"}}}


id: MONDO:0014088
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85071,85072],"is_not":false,"summary":null,"term":"MONDO:0014088"}]},"cv_name":"mondo","definition":"Any advanced sleep phase syndrome in which the cause of the disease is a mutation in the CSNK1D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"advanced sleep phase syndrome","termid":"MONDO:0015609"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"is_obsolete":false,"name":"advanced sleep phase syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3808874","DOID:0110012","GARD:15922","OMIM:615224","MEDGEN:815204"],"synonyms":[{"name":"CSNK1D advanced sleep phase syndrome","type":"exact"},{"name":"FASPS2","type":"exact"},{"name":"advanced sleep phase syndrome caused by mutation in CSNK1D","type":"exact"},{"name":"advanced sleep phase syndrome type 2","type":"exact"},{"name":"advanced sleep phase syndrome, familial, 2","type":"related"},{"name":"advanced sleep phase syndrome, familial, type 2","type":"exact"},{"name":"advanced sleep-phase syndrome, familial, 2","type":"exact"},{"name":"familial advanced sleep phase syndrome 2","type":"exact"}],"termid":"MONDO:0014088","terms_by_termid":{"MONDO:0014088":null},"xrefs":{"Monarch":{"xref_id":"0014088"}}}


id: GO:0018853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + perillyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0731"],"gene_count":0,"genotype_count":0,"name":"obsolete perillyl-CoA synthetase activity (obsolete GO:0018853)","synonyms":[{"name":"perillyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0018853"}


id: PR:Q10108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.09c","synonyms":[{"name":"Spom972h-SPAC18G6.09c","type":"exact"}],"termid":"PR:Q10108"}


id: GO:1903691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GO_REF:0000058","PMID:18394891","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"positively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"activation of wound healing, spreading of epidermal cells","type":"narrow"},{"name":"up regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"up-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"upregulation of wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:1903691"}


id: MONDO:0020356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired defect characterized by the presence of a hole in or adjacent to the iris.","definition_xrefs":["NCIT:C98879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of iris","secondary_identifiers":["MEDGEN:116097","icd11.foundation:1552972259","UMLS:C0240063","HP:0000612","SCTID:9446007","Orphanet:98944","GARD:1434","MedDRA:10052642"],"synonyms":[{"name":"coloboma of iris","type":"exact"},{"name":"coloboma of iris (disease)","type":"exact"},{"name":"coloboma of the iris","type":"exact"}],"termid":"MONDO:0020356","xrefs":{"Monarch":{"xref_id":"0020356"}}}


id: PR:Q9US26
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.03","synonyms":[{"name":"Spom972h-fta2","type":"exact"},{"name":"sim4 complex subunit fta2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US26"}


id: GO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat generation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat generation","synonyms":[{"name":"activation of heat generation","type":"narrow"},{"name":"stimulation of heat generation","type":"narrow"},{"name":"up regulation of heat generation","type":"exact"},{"name":"up-regulation of heat generation","type":"exact"},{"name":"upregulation of heat generation","type":"exact"}],"termid":"GO:0031652"}


id: PBO:0072112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 1","termid":"PBO:0072112"}


id: MONDO:0017376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reactive arthritis (ReA) is an autoimmune disorder belonging to the group of seronegative spondyloarthropathies and is characterized by the classic triad of arthritis, urethritis and conjunctivitis.","definition_xrefs":["Orphanet:29207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive arthritis","secondary_identifiers":["MedDRA:10003267","GARD:5693","MEDGEN:39047","MedDRA:10038294","EFO:0007460","MESH:D016918","ICD9:711.3","NCIT:C128332","ICD9:711.40","ICD9:099.3","DOID:6196","NORD:1650","SCTID:129133005","UMLS:C0085435","ICD9:711.30"],"synonyms":[{"name":"Fiessinger Leroy Reiter syndrome","type":"exact"},{"name":"Fiessinger-Leroy disease","type":"exact"},{"name":"Fiessinger-Leroy-Reiter syndrome","type":"exact"},{"name":"PIRA","type":"related"},{"name":"Reiter disease","type":"exact"},{"name":"Reiter syndrome","type":"exact"},{"name":"Reiter's disease","type":"exact"},{"name":"Reiter's syndrome","type":"exact"},{"name":"arthritis urethritica","type":"exact"},{"name":"polyarthritis enterica","type":"exact"},{"name":"post-bacterial arthropathy","type":"exact"},{"name":"post-infectious arthritis","type":"related"},{"name":"post-infectious reactive arthropathy","type":"related"},{"name":"postdysenteric arthropathy","type":"exact"},{"name":"reactive arthritis","type":"exact"},{"name":"venereal arthritis","type":"exact"}],"termid":"MONDO:0017376","xrefs":{"Monarch":{"xref_id":"0017376"}}}


id: MONDO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 7","secondary_identifiers":["MEDGEN:1786836","DOID:0081426","GARD:18444","OMIM:619216","UMLS:C5543119"],"synonyms":[{"name":"HMNMYO","type":"exact"},{"name":"neuropathy, hereditary motor, with myopathic features","type":"exact"}],"termid":"MONDO:0030977","xrefs":{"Monarch":{"xref_id":"0030977"}}}


id: PBO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad23 homolog Rhp23","termid":"PBO:0004293"}


id: MONDO:0003967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone osteosarcoma affecting multiple skeletal sites, with multifocal lesions discovered within 6 months of the appearance of the initial tumor. It has a poor prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal osteogenic sarcoma","termid":"MONDO:0002622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"synchronous multifocal osteogenic sarcoma","secondary_identifiers":["MEDGEN:236965","DOID:6696","NCIT:C6471","UMLS:C1336544"],"synonyms":[{"name":"synchronous multifocal osteosarcoma","type":"exact"}],"termid":"MONDO:0003967","xrefs":{"Monarch":{"xref_id":"0003967"}}}


id: PBO:0088868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P2","termid":"PBO:0088868"}


id: GO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during interphase of the cell cycle. Chromosomes are usually decondensed during interphase and each long DNA molecule in a chromosome is divided into a large number of discrete domains that are folded differently.","definition_xrefs":["ISBN:0815316194","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete interphase chromosome (obsolete GO:0005707)","synonyms":[{"name":"interphase chromosome","type":"exact"}],"termid":"GO:0005707"}


id: PBO:0071918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 3","termid":"PBO:0071918"}


id: PBO:0078233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 15","termid":"PBO:0078233"}


id: PBO:0073839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A14 antisense RNA 1","termid":"PBO:0073839"}


id: PBO:0071556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 21","termid":"PBO:0071556"}


id: GO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"},{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in inflammatory response","synonyms":[{"name":"oxidative burst during acute inflammatory response","type":"broad"},{"name":"production of reactive oxygen species during acute inflammatory response","type":"broad"},{"name":"respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002536"}


id: PBO:0081265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 3","termid":"PBO:0081265"}


id: GO:0033156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligogalacturonides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"oligogalacturonide transport","termid":"GO:0033156"}


id: GO:0043658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-enveloped cell compartment, composed of the endosymbiont with its plasmalemma (as inner envelope) and an outer envelope (the perisymbiontic membrane) derived from the host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host symbiosome","termid":"GO:0043658"}


id: GO:0043940
data:
  {"annotated_genes":["SJAG_02169","SJAG_00993","SJAG_04853","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[102294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[92156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation","termid":"GO:0034306"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043940","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: PR:Q9USU3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fbh1 gene.","definition_xrefs":["UniProtKB:Q9USU3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box DNA helicase protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.01","synonyms":[{"name":"Spom972h-fbh1","type":"exact"}],"termid":"PR:Q9USU3"}


id: GO:0050525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cutin + H2O = cutin monomers.","definition_xrefs":["MetaCyc:3.1.1.74-RXN","EC:3.1.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"cutinase activity","synonyms":[{"name":"cutin hydrolase activity","type":"related"}],"termid":"GO:0050525"}


id: GO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a nucleotide from a protein amino acid.","definition_xrefs":["PMID:21734656","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein denucleotidylation","termid":"GO:0044601"}


id: GO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}


id: PBO:0091660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate lyase Icl1","termid":"PBO:0091660"}


id: GO:0140060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the terminal anatomical structures of an axon are generated and organized into branches of specialised projections, or boutons. An axon is the long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminal branches.","definition_xrefs":["GOC:aruk","PMID:23764288","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"is_a","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon arborization","termid":"GO:0140060"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: PBO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK4-CATSPERZ readthrough (NMD candidate)","termid":"PBO:0052174"}


id: PR:Q92341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- str3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore iron transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.03c","synonyms":[{"name":"Spom972h-str3","type":"exact"}],"termid":"PR:Q92341"}


id: MONDO:0009423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypokalemic alkalosis, familial, with specific renal tubulopathy","secondary_identifiers":["MESH:C562654","SCTID:81987005","UMLS:C0268444","MEDGEN:78677","OMIM:241150"],"synonyms":[{"name":"Gullner syndrome","type":"related"},{"name":"hypokalemia, familial","type":"related"},{"name":"hypokalemic alkalosis, familial, with specific renal tubulopathy","type":"exact"}],"termid":"MONDO:0009423","xrefs":{"Monarch":{"xref_id":"0009423"}}}


id: MOD:02069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-glutamine residue","termid":"MOD:02069"}


id: PBO:0116326
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of High Pi","termid":"PBO:0116326"}


id: GO:0038189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12852851","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuropilin signaling pathway","synonyms":[{"name":"Npn signaling","type":"exact"}],"termid":"GO:0038189"}


id: PBO:0030420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sterol_binding","termid":"PBO:0030420"}


id: FYPO:0006921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of gene conversion at replication fork barriers is decreased.","definition_xrefs":["PomBase:mah","PMID:31149897","PMID:28586299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gene conversion during vegetative growth","termid":"FYPO:0000185"},{"relation_name":"is_a","term_name":"decreased DNA recombination at mitotic DNA replication fork barriers","termid":"FYPO:0006920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased gene conversion at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased gene conversion at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased gene conversion at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"reduced gene conversion at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006921"}


id: GO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell tolerance induction","synonyms":[{"name":"regulation of NK cell tolerance induction","type":"exact"}],"termid":"GO:0002871"}


id: FYPO:0006195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in fewer bundles than normal (usually only one or two), and bundles are longer than normal and curved around one or both ends of the cell.","definition_xrefs":["PMID:14742702","PMID:16481403","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long interphase microtubules curved around cell end","termid":"FYPO:0005880"},{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of elongated microtubule bundles curved around cell end","synonyms":[{"name":"decreased number of elongated MT bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated interphase microtubule bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell end during mitotic cell cycle","type":"related"},{"name":"decreased number of elongated microtubule bundles curved around cell end during vegetative growth","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell tip","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around end of cell","type":"exact"},{"name":"decreased number of microtubule arrays curved around cell end","type":"related"},{"name":"single elongated microtubule bundle curved around cell end","type":"narrow"}],"termid":"FYPO:0006195"}


id: PR:Q9UUF4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered inheritance of mitochondria protein 19 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.02","synonyms":[{"name":"Spom972h-SPBC17A3.02","type":"exact"}],"termid":"PR:Q9UUF4"}


id: MONDO:0010278
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86537],"is_not":false,"summary":null,"term":"MONDO:0010278"}]},"cv_name":"mondo","definition":"A very rare form of syndromic intellectual deficit characterized by microcephaly, severe developmental delay or regression, hypotonia, abnormal movements, and early-onset seizures.","definition_xrefs":["Orphanet:85278"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"Christianson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567484","DOID:0060825","ICD9:759.89","OMIM:300243","GARD:10572","UMLS:C2678194","MEDGEN:394455","SCTID:702354007"],"synonyms":[{"name":"Angelman-like syndrome X-linked","type":"related"},{"name":"Angelman-like syndrome, X-linked","type":"related"},{"name":"Christianson syndrome","type":"exact"},{"name":"MRXS Christianson","type":"related"},{"name":"MRXSCH","type":"exact"},{"name":"X-linked Angelman-like syndrome","type":"exact"},{"name":"X-linked intellectual disability - craniofacial dysmorphism - epilepsy - ophthalmoplegia - cerebellar atrophy","type":"related"},{"name":"X-linked intellectual disability, South African type","type":"exact"},{"name":"X-linked intellectual disability-craniofacial dysmorphism-epilepsy-ophthalmoplegia-cerebellar atrophy syndrome","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Christianson type","type":"exact"},{"name":"intellectual disability X-linked syndromic Christianson type","type":"related"},{"name":"intellectual disability microcephaly epilepsy and ataxia syndrome","type":"related"},{"name":"intellectual disability, X-linked syndromic, Christianson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Christianson type","type":"related"},{"name":"intellectual disability, microcephaly, epilepsy, and ataxia syndrome","type":"exact"},{"name":"mental retardation, X-linked syndromic, Christianson type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Christianson type","type":"related"},{"name":"mental retardation, microcephaly, epilepsy, and ataxia syndrome","type":"exact"}],"termid":"MONDO:0010278","terms_by_termid":{"MONDO:0010278":null},"xrefs":{"Monarch":{"xref_id":"0010278"}}}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: GO:0015009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"corrin metabolic process","synonyms":[{"name":"corrin metabolism","type":"exact"}],"termid":"GO:0015009"}


id: PBO:0074451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival motor neuron domain containing 1","termid":"PBO:0074451"}


id: GO:0034884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-N-formylaminovinylacetaldehyde + H2O = gamma-N-formylaminovinylacetate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1349"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-N-formylaminovinylacetaldehyde dehydrogenase activity (obsolete GO:0034884)","synonyms":[{"name":"gamma-N-formylaminovinylacetaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0034884"}


id: PBO:0013751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 14-demethylase Erg11 (predicted)","termid":"PBO:0013751"}


id: PBO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NCE102","termid":"PBO:0003227"}


id: PBO:0029679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation","termid":"PBO:0029679"}


id: FYPO:0005526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of organelles or other particles along microtubules is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased transport along microtubule during vegetative growth","synonyms":[{"name":"decreased establishment of localization by movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased microtubule-based transport during vegetative growth","type":"broad"},{"name":"decreased movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005526"}


id: GO:0008360
data:
  {"annotated_genes":["SJAG_04724","SJAG_03486","SJAG_03705","SJAG_00236","SJAG_04522","SJAG_01456","SJAG_02022","SJAG_00596","SJAG_04461","SJAG_01799","SJAG_00610","SJAG_00845","SJAG_04322","SJAG_02536","SJAG_04509","SJAG_03581","SJAG_00333","SJAG_02838","SJAG_03637","SJAG_00661","SJAG_00028","SJAG_00216","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119448,119449],"is_not":false,"summary":null,"term":"GO:0008360"},{"annotations":[106867,103492,99740,110775,116506,117933,88009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[116610,107627],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[105370,93711,100175],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[103703],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[94554,95635,91106,104538,113068,118816],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[92394,87854,102849],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the surface configuration of a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell shape","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0045788","GO:0045789"],"termid":"GO:0008360","terms_by_termid":{"GO:0008360":null,"GO:0051523":null,"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: GO:0102208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","RHEA:31411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol methylase activity","secondary_identifiers":["EC:2.1.1.222","MetaCyc:RXN-12160"],"termid":"GO:0102208"}


id: PBO:0039249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L2","termid":"PBO:0039249"}


id: PBO:0049684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD antisense growth-associated long non-coding RNA","termid":"PBO:0049684"}


id: PBO:0062005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 5 pseudogene","termid":"PBO:0062005"}


id: PBO:0004877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing element (RRPE)-binding protein (predicted)","termid":"PBO:0004877"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: FYPO:0003174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"normal NER during cellular response to UV","type":"exact"},{"name":"normal excision repair during cellular response to UV","type":"broad"},{"name":"normal nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal nucleotide-excision repair during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003174"}


id: MONDO:0035448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of rare central nervous system malformations characterized by varying degrees of absence or dysplasia of the derivatives of the prosencephalon (i. e. telencephalon and diencephalon), with an intact cranial vault. The spectrum comprises atelencephaly, the less severe form, in which only the telencephalon is affected, and aprosencephaly, where the diencephalon is also involved. The malformations may occur in an isolated form or in association with other anomalies. [Orphanet:566847]","definition_xrefs":["Orphanet:566847"],"gene_count":0,"genotype_count":0,"name":"obsolete aprosencephaly/atelencephaly spectrum (obsolete MONDO:0035448)","termid":"MONDO:0035448","xrefs":{"Monarch":{"xref_id":"0035448"}}}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: PBO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter","termid":"PBO:0110101"}


id: GO:1900524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of flocculation via cell wall protein-carbohydrate interaction process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:15466424","PMID:16568252","GOC:dgf","PMID:10591965","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900524)","synonyms":[{"name":"activation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900524"}


id: GO:0072262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of glomerular mesangial cells in the metanephros, resulting in the expansion of the population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric glomerular mesangium development","termid":"GO:0072223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}


id: FYPO:0003132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a gene product is normally localized to discrete regions in the nucleus (i.e. its localization is indistinguishable from wild type), visible as foci or dots by microscopy, during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal punctate nuclear localization during cellular response to ionizing radiation","synonyms":[{"name":"normal punctate nuclear localisation during cellular response to ionising radiation","type":"related"},{"name":"normal punctate nuclear localization during cellular response to IR","type":"exact"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal punctate nuclear localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003132"}


id: PBO:0088808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti12","termid":"PBO:0088808"}


id: FYPO:0004398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylarsine oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to phenylarsine oxide","synonyms":[{"name":"resistance to phenylarsine oxide during mitotic cell cycle","type":"related"},{"name":"resistance to phenylarsine oxide during vegetative growth","type":"exact"},{"name":"resistant to phenylarsine oxide","type":"exact"}],"termid":"FYPO:0004398"}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: PBO:0013750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10","termid":"PBO:0013750"}


id: GO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:0008630"}


id: PBO:0052490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 4","termid":"PBO:0052490"}


id: PBO:0075621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 2","termid":"PBO:0075621"}


id: MONDO:0011420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to partial GHR deficiency is a rare, genetic, endocrine disease characterized by idiopathic short stature due to diminished GHR function (decreased ligand binding or reduced availability of receptor), thus resulting in partial insensitivity to growth hormone.","definition_xrefs":["Orphanet:314802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary dwarfism","termid":"MONDO:0006909"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to partial GHR deficiency","secondary_identifiers":["UMLS:C1858656","MESH:C565805","MEDGEN:346958","GARD:17435","OMIM:604271"],"synonyms":[{"name":"GHIP","type":"related"},{"name":"Growth hormone deficiency, isolated, partial","type":"related"},{"name":"Growth hormone, insensitivity to, partial","type":"related"},{"name":"growth hormone insensitivity, partial","type":"related"},{"name":"increased responsiveness to Growth hormone","type":"related"},{"name":"short stature due to partial growth hormone receptor deficiency","type":"exact"}],"termid":"MONDO:0011420","xrefs":{"Monarch":{"xref_id":"0011420"}}}


id: CHEBI:16240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide","termid":"CHEBI:16240"}


id: PBO:0062614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 2 pseudogene","termid":"PBO:0062614"}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: GO:0046672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell programmed cell death","termid":"GO:0046669"},{"relation_name":"is_a","term_name":"positive regulation of retinal cell programmed cell death","termid":"GO:0046670"},{"relation_name":"positively_regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"activation of retinal cell programmed cell death","type":"broad"},{"name":"positive regulation of retinal cell programmed cell death","type":"broad"},{"name":"stimulation of retinal cell programmed cell death","type":"broad"},{"name":"up regulation of retinal cell programmed cell death","type":"broad"},{"name":"up-regulation of retinal cell programmed cell death","type":"broad"},{"name":"upregulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046672"}


id: MONDO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-mesomelia-intellectual disability-heart defects syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by developmental delay, intellectual disability, thin habitus with narrow shoulders, mesomelic shortness of the arms, craniofacial dysmorphism (e.g. long lower face, maxillary hypoplasia, beak nose, short columella, prognathia, high arched palate, obtuse mandibular angle), brachydactyly (mostly involving middle phalanges) and cardiovascular anomalies (i.e. aortic root dilatation, mitral valve prolapse).","definition_xrefs":["Orphanet:1277"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-mesomelia-intellectual disability-heart defects syndrome","secondary_identifiers":["GARD:5036","MEDGEN:1645467","UMLS:C4707567"],"synonyms":[{"name":"Stratton-Garcia-Young syndrome","type":"exact"},{"name":"brachydactyly mesomelia intellectual disability aortic dilatation mitral valve prolapse and characteristic face","type":"related"},{"name":"brachydactyly mesomelia mental retardation aortic dilatation mitral valve prolapse and characteristic face","type":"related"}],"termid":"MONDO:0015259","xrefs":{"Monarch":{"xref_id":"0015259"}}}


id: MONDO:0021040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the pancreas.","definition_xrefs":["NCIT:C3305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neoplasm","secondary_identifiers":["UMLS:C0030297","MEDGEN:18279","EFO:0003860","MESH:D010190","ONCOTREE:PANCREAS","SCTID:126859007"],"synonyms":[{"name":"neoplasm of pancreas","type":"exact"},{"name":"neoplasm of the pancreas","type":"exact"},{"name":"pancreas","type":"related"},{"name":"pancreas neoplasm","type":"exact"},{"name":"pancreas neoplasm (disease)","type":"exact"},{"name":"pancreas tumor","type":"exact"},{"name":"pancreas tumour","type":"exact"},{"name":"pancreatic neoplasm","type":"exact"},{"name":"pancreatic tumor","type":"exact"},{"name":"pancreatic tumour","type":"exact"},{"name":"tumor of pancreas","type":"exact"},{"name":"tumor of the pancreas","type":"exact"},{"name":"tumour of pancreas","type":"exact"},{"name":"tumour of the pancreas","type":"exact"}],"termid":"MONDO:0021040","xrefs":{"Monarch":{"xref_id":"0021040"}}}


id: GO:0008088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"axo-dendritic transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"narrow"},{"name":"axonal transport","type":"narrow"},{"name":"axoplasmic transport","type":"narrow"}],"termid":"GO:0008088"}


id: PBO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorein homolog Vps1302 (predicted)","termid":"PBO:0018097"}


id: MONDO:0020016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neurologic disease with psychiatric involvement (obsolete MONDO:0020016)","secondary_identifiers":["Orphanet:98033"],"termid":"MONDO:0020016","xrefs":{"Monarch":{"xref_id":"0020016"}}}


id: PBO:0087742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087742"}


id: PR:Q09888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug160 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 160 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.14","synonyms":[{"name":"Spom972h-mug160","type":"exact"}],"termid":"PR:Q09888"}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: MOD:01928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an L-asparagine residue or an L-aspartic acid residue with a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)glycine.","definition_xrefs":["ChEBI:21479","PubMed:1826288","RESID:AA0126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"XLNK-4Asp-NGly","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01928"}


id: GO:0048913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in the anterior lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}


id: MONDO:0007049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acroleukopathy, symmetric","secondary_identifiers":["OMIM:102000","MESH:C566322","MEDGEN:350143","UMLS:C1863342"],"synonyms":[{"name":"acroleukopathy, symmetric","type":"exact"}],"termid":"MONDO:0007049","xrefs":{"Monarch":{"xref_id":"0007049"}}}


id: PBO:0048063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 12","termid":"PBO:0048063"}


id: MONDO:0017327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary non-gestational choriocarcinoma of ovary is a rare ovarian germ cell malignant tumor, arising from primordial germ cells, usually presenting with nausea, vomiting, abdominal pain, menstrual irregularities, and characterized by fast growth pattern, metastasis to lung, liver and brain and production of human chorionic gonadotrophin (hCG). It is apparently chemoresistant and has a worse prognosis than gestational choriocarcinoma and hence should be distinguished from the latter by DNA polymorphism.","definition_xrefs":["Orphanet:289356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary non-gestational choriocarcinoma of ovary","secondary_identifiers":["SCTID:716588005","GARD:21136","MEDGEN:906353","UMLS:C4274424"],"synonyms":[{"name":"NGCO","type":"exact"},{"name":"primary non-gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0017327","xrefs":{"Monarch":{"xref_id":"0017327"}}}


id: GO:0019554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including oxaloacetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"glutamate catabolic process to oxaloacetate","synonyms":[{"name":"glutamate breakdown to oxaloacetate","type":"exact"},{"name":"glutamate degradation to oxaloacetate","type":"exact"}],"termid":"GO:0019554"}


id: PBO:0034335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_direct_output_(obsolete_RO:0002402)","termid":"PBO:0034335"}


id: PBO:0076229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT20 homolog, SAGA complex component","termid":"PBO:0076229"}


id: GO:1901692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: MONDO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypobetalipoproteinemia in which the cause of the disease is a mutation in the ANGPTL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypobetalipoproteinemia","termid":"MONDO:0017774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"familial hypobetalipoproteinemia 2","secondary_identifiers":["UMLS:C1857970","MESH:C565732","GARD:15376","DOID:0111061","MEDGEN:341895","OMIM:605019"],"synonyms":[{"name":"ANGPTL3 hypobetalipoproteinemia","type":"exact"},{"name":"FHBL2","type":"exact"},{"name":"combined familial hypolipidemia","type":"exact"},{"name":"familial hypobetalipoproteinemia 2","type":"exact"},{"name":"familial hypobetalipoproteinemia type 2","type":"exact"},{"name":"hypobetalipoproteinemia caused by mutation in ANGPTL3","type":"exact"},{"name":"hypobetalipoproteinemia, familial, 2","type":"related"},{"name":"hypobetalipoproteinemia, familial, type 2","type":"exact"},{"name":"hypolipidemia, familial, combined","type":"related"}],"termid":"MONDO:0011505","xrefs":{"Monarch":{"xref_id":"0011505"}}}


id: PBO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 26","termid":"PBO:0052787"}


id: GO:0018860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + anthranilate + CoA = AMP + diphosphate + anthranilyl-CoA.","definition_xrefs":["EC:6.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"anthranilate-CoA ligase activity","secondary_identifiers":["MetaCyc:AMINOBENZCOALIG-RXN","UM-BBD_reactionID:r0341","RHEA:10828","KEGG_REACTION:R00982"],"synonyms":[{"name":"2-aminobenzoate coenzyme A ligase activity","type":"related"},{"name":"2-aminobenzoate-CoA ligase activity","type":"related"},{"name":"2-aminobenzoate-coenzyme A ligase activity","type":"related"},{"name":"anthranilate--CoA ligase activity","type":"exact"},{"name":"anthranilate:CoA ligase (AMP-forming)","type":"related"},{"name":"anthraniloyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018860"}


id: PBO:0075430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm protein associated with the nucleus, X-linked, family member A1","termid":"PBO:0075430"}


id: MONDO:0013360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive brachyolmia, Maroteaux type is a relatively mild form of brachyolmia, a group of rare genetic skeletal disorders, characterized by short trunk/short stature, generalized platyspondyly and rounding of vertebral bodies. It remains unknown whether the phenotype represents a single disease entity or a heterogeneous group of mild skeletal dysplasias.","definition_xrefs":["Orphanet:93302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachyolmia","termid":"MONDO:0015262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia, Maroteaux type","secondary_identifiers":["GARD:16816","MEDGEN:1777254","OMIM:613678","SCTID:389165004","UMLS:C5399913"],"synonyms":[{"name":"BCYM2","type":"related"},{"name":"brachyolmia type 2","type":"exact"},{"name":"brachyolmia, Maroteaux type","type":"exact"}],"termid":"MONDO:0013360","xrefs":{"Monarch":{"xref_id":"0013360"}}}


id: FYPO:0002797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation","synonyms":[{"name":"decreased protein breakdown","type":"exact"},{"name":"decreased protein catabolic process","type":"exact"},{"name":"decreased protein catabolism","type":"exact"},{"name":"reduced protein degradation","type":"exact"}],"termid":"FYPO:0002797"}


id: PBO:0028408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalase_activity","termid":"PBO:0028408"}


id: GO:0045578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"negatively_regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell differentiation","synonyms":[{"name":"down regulation of B cell differentiation","type":"exact"},{"name":"down-regulation of B cell differentiation","type":"exact"},{"name":"downregulation of B cell differentiation","type":"exact"},{"name":"inhibition of B cell differentiation","type":"narrow"},{"name":"negative regulation of B cell development","type":"related"},{"name":"negative regulation of B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-cell differentiation","type":"exact"},{"name":"negative regulation of B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045578"}


id: MONDO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign epilepsy with centrotemporal spikes (obsolete MONDO:0002611)","termid":"MONDO:0002611","xrefs":{"Monarch":{"xref_id":"0002611"}}}


id: PBO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IH","termid":"PBO:0060330"}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: GO:0004601
data:
  {"annotated_genes":["SJAG_01216","SJAG_00489","SJAG_05181","SJAG_00141","SJAG_02630","SJAG_04823","SJAG_03166","SJAG_03623","SJAG_04632","SJAG_02515","SJAG_01292","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79482,106810],"is_not":false,"summary":null,"term":"GO:0004601"},{"annotations":[70790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[99276,89360,97944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[63497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[75730,95169,108852,70131,79596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a donor + a peroxide = an oxidized donor + 2 H2O.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_04632":null,"SJAG_04823":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peroxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03532","Reactome:R-HSA-3341296","GO:0016687","Reactome:R-HSA-6789126","Reactome:R-HSA-209973","GO:0016685","Reactome:R-HSA-140359","Reactome:R-HSA-5631885","Wikipedia:Peroxidase","Reactome:R-HSA-8933635","Reactome:R-HSA-1222346","Reactome:R-HSA-6789031","GO:0016686","Reactome:R-HSA-2559639","Reactome:R-HSA-2309773","GO:0016693","Reactome:R-HSA-209815","Reactome:R-HSA-350901","EC:1.11.1.-","Reactome:R-HSA-209925","Reactome:R-HSA-8855490","Reactome:R-HSA-209840"],"synonyms":[{"name":"scopoletin peroxidase","type":"narrow"},{"name":"secretory plant peroxidase activity","type":"narrow"},{"name":"thiocyanate peroxidase","type":"narrow"},{"name":"verdoperoxidase","type":"narrow"},{"name":"MPO","type":"related"},{"name":"bacterial catalase-peroxidase activity","type":"narrow"},{"name":"donor:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"eosinophil peroxidase activity","type":"narrow"},{"name":"extensin peroxidase","type":"narrow"},{"name":"guaiacol peroxidase","type":"narrow"},{"name":"heme peroxidase","type":"narrow"},{"name":"horseradish peroxidase (HRP)","type":"narrow"},{"name":"japanese radish peroxidase","type":"narrow"},{"name":"lactoperoxidase activity","type":"narrow"},{"name":"myeloperoxidase activity","type":"narrow"},{"name":"oxyperoxidase activity","type":"related"},{"name":"peroxidase reaction","type":"exact"},{"name":"protoheme peroxidase","type":"narrow"},{"name":"pyrocatechol peroxidase","type":"narrow"}],"termid":"GO:0004601","terms_by_termid":{"GO:0004096":null,"GO:0004601":null,"GO:0004602":null,"GO:0008379":null,"GO:0051920":null}}


id: GO:0097549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription by chromatin organization.","definition_xrefs":["PMID:23123093","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin organization involved in negative regulation of transcription (obsolete GO:0097549)","synonyms":[{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"negative regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription by chromatin organization","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"}],"termid":"GO:0097549"}


id: FYPO:0000400
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the G2/M transition, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000446"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"secondary_identifiers":["FYPO:0003373"],"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic G2/M phase arrest","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at G2/M phase transition","type":"exact"},{"name":"abolished mitotic G2/M phase transition","type":"related"},{"name":"cell cycle progression through the G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000400","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0016715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ependymoblastoma is a rare type of primitive neuroectodermal tumor (PNET) that usually occurs in young children under the age of 2 and is histologically distinguished by the production of ependymoblastic rosettes. It is associated with an aggressive course and a poor prognosis.","definition_xrefs":["Orphanet:251880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ependymoblastoma","secondary_identifiers":["DOID:0080903","GARD:20720","SCTID:715901002","MedDRA:10014966","DOID:4794","MEDGEN:152150","UMLS:C0700367","NCIT:C4915","ONCOTREE:ETANTR"],"synonyms":[{"name":"ETANTR","type":"related"},{"name":"ETMR","type":"related"},{"name":"ETMR, C19MC-altered","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes with C19MC amplification","type":"exact"},{"name":"embryonal tumor with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"embryonal tumor with abundant neuropil and true Rosettes","type":"exact"},{"name":"embryonal tumor with abundant neuropil and true rosettes","type":"related"},{"name":"embryonal tumour with Multilayered Rosettes","type":"exact"},{"name":"embryonal tumour with Multilayered Rosettes with C19MC amplification","type":"exact"},{"name":"embryonal tumour with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"embryonal tumour with abundant neuropil and true Rosettes","type":"exact"},{"name":"embryonal tumour with abundant neuropil and true rosettes","type":"related"},{"name":"ependymoblastoma","type":"exact"},{"name":"neuroectodermal tumors primitive","type":"related"},{"name":"neuroectodermal tumours primitive","type":"related"}],"termid":"MONDO:0016715","xrefs":{"Monarch":{"xref_id":"0016715"}}}


id: PBO:0056760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL14 divergent transcript","termid":"PBO:0056760"}


id: PBO:0088606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear bridge Ish domain protein Les1","termid":"PBO:0088606"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: MONDO:0004521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma occurring in adults.","definition_xrefs":["NCIT:C7944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult epithelioid sarcoma","secondary_identifiers":["MEDGEN:124631","UMLS:C0279545","DOID:8282"],"synonyms":[{"name":"adult epithelioid sarcoma","type":"exact"},{"name":"epithelioid sarcoma","type":"broad"},{"name":"epithelioid sarcoma of adults","type":"exact"}],"termid":"MONDO:0004521","xrefs":{"Monarch":{"xref_id":"0004521"}}}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: PBO:0091036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pal1 family early clathrin mediated endocytosis factor, meiosis specific Pal2","termid":"PBO:0091036"}


id: PBO:0035923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035923"}


id: PBO:0087349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between spindle pole bodies in dividing cells; localizes to poles and microtubules of spindle during anaphase and contributes to spindle stability; involved in Glc7p localization and regulation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087349"}


id: PR:O14212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C6B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.07c","synonyms":[{"name":"Spom972h-SPAC6B12.07c","type":"exact"}],"termid":"PR:O14212"}


id: PBO:0040652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1 pseudogene 1","termid":"PBO:0040652"}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: PBO:0039624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A7","termid":"PBO:0039624"}


id: PBO:0091650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho841","termid":"PBO:0091650"}


id: MONDO:1011800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractural arachnodactyly, non-human animal","secondary_identifiers":["OMIA:001511"],"termid":"MONDO:1011800","xrefs":{"Monarch":{"xref_id":"1011800"}}}


id: PBO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 9","termid":"PBO:0070739"}


id: MONDO:0002741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C40135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament cancer","termid":"MONDO:0003612"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament adenocarcinoma","secondary_identifiers":["DOID:3700","MEDGEN:311429","UMLS:C1519866"],"synonyms":[{"name":"uterine ligament adenocarcinoma","type":"exact"}],"termid":"MONDO:0002741","xrefs":{"Monarch":{"xref_id":"0002741"}}}


id: MONDO:0006898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tissues around a joint. (Dorland, 27th ed)","definition_xrefs":["MESH:D010489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periarthritis","secondary_identifiers":["MedDRA:10034464","MEDGEN:45397","SCTID:50921008","UMLS:C0031037","DOID:2964","EFO:1001097"],"termid":"MONDO:0006898","xrefs":{"Monarch":{"xref_id":"0006898"}}}


id: GO:0014816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a satellite cell.","definition_xrefs":["PMID:16607119","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: MONDO:0020302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to maternal 15q11q13 deletion","secondary_identifiers":["Orphanet:98794","UMLS:C5566334","GARD:19577","MEDGEN:1797757"],"synonyms":[{"name":"Angelman syndrome due to maternal monosomy 15q11q13","type":"exact"}],"termid":"MONDO:0020302","xrefs":{"Monarch":{"xref_id":"0020302"}}}


id: PR:O74346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P cell-type agglutination protein map4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.06c","synonyms":[{"name":"Spom972h-map4","type":"exact"}],"termid":"PR:O74346"}


id: PBO:0002897
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains UAS","termid":"PBO:0002897"}


id: MONDO:0017106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"retrocerebellar cyst","secondary_identifiers":["UMLS:C1845370","Orphanet:269200","HP:0006951","MEDGEN:335172"],"synonyms":[{"name":"Retrocerebellar arachnoid cyst","type":"exact"},{"name":"Retrocerebellar cyst","type":"exact"},{"name":"retrocerebellar cyst (disease)","type":"exact"}],"termid":"MONDO:0017106","xrefs":{"Monarch":{"xref_id":"0017106"}}}


id: SO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The simplest repeated component of a repeat region. A single repeat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_unit","secondary_identifiers":["http://www.insdc.org/files/feature_table.html"],"synonyms":[{"name":"repeat unit","type":"exact"}],"termid":"SO:0000726"}


id: MONDO:0021252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung hilum neoplasm (obsolete MONDO:0021252)","termid":"MONDO:0021252","xrefs":{"Monarch":{"xref_id":"0021252"}}}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butanone oxidase activity (obsolete GO:0018486)","termid":"GO:0018486"}


id: MONDO:0020604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked dominant form of disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked dominant disease","secondary_identifiers":["MEDGEN:1798084","DOID:0080009","UMLS:C5566661"],"termid":"MONDO:0020604","xrefs":{"Monarch":{"xref_id":"0020604"}}}


id: GO:0030621
data:
  {"annotated_genes":["SJAG_00531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71379],"is_not":false,"summary":null,"term":"GO:0030621"}]},"cv_name":"molecular_function","definition":"Binding to a U4 small nuclear RNA (U4 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U4 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030621","terms_by_termid":{"GO:0030621":null}}


id: MONDO:0005045
data:
  {"annotated_genes":["SJAG_01181","SJAG_03077","SJAG_03703","SJAG_02431","SJAG_03126","SJAG_02785","SJAG_01665","SJAG_03145","SJAG_02923","SJAG_02536","SJAG_00547","SJAG_02342","SJAG_00228","SJAG_03453","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[84989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[84991,84992,84990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[84997,84995,84996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[85153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[85131,85132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[86421,86422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[85305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[87222,87221,87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85476,85477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.","definition_xrefs":["NCIT:C34449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000538","NANDO:1200288","SCTID:233873004","ICD9:425.1","NANDO:2200229","MESH:D002312","DOID:11984","NANDO:2100054","NANDO:2201042","ICD10CM:I42.2","MedDRA:10020871","MEDGEN:2881","ICD9:425.11","ICD9:425.4","ICD10CM:I42.1","HP:0001639","UMLS:C0007194","icd11.foundation:1830681485","NANDO:1200286","Orphanet:217569"],"synonyms":[{"name":"HCM - hypertrophic cardiomyopathy","type":"related"},{"name":"familial hypertrophic cardiomyopathy","type":"narrow"},{"name":"hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hypertrophic subaortic stenosis","type":"exact"},{"name":"obstructive hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0005045","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005045"}}}


id: FYPO:0007814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea","synonyms":[{"name":"increased rate of DNA replication elongation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to HU","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007814"}


id: MONDO:0012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 7","secondary_identifiers":["MEDGEN:393658","MESH:C567389","GARD:15545","OMIM:612240","UMLS:C2677106"],"synonyms":[{"name":"ATFB7","type":"related"},{"name":"KCNA5 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 7","type":"exact"},{"name":"atrial fibrillation, familial, type 7","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNA5","type":"exact"}],"termid":"MONDO:0012828","xrefs":{"Monarch":{"xref_id":"0012828"}}}


id: GO:0120531
data:
  {"annotated_genes":["SJAG_01865","SJAG_02163","SJAG_00554","SJAG_04568","SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67521,58178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004337"},{"annotations":[119585,119584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097269"},{"annotations":[74359,71854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045547"},{"annotations":[99599,109499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004311"}]},"cv_name":"molecular_function","definition":"Catalysis of chain elongation of prenyl diphosphate substrates via one or more condensation reactions with isopentenyl diphosphate to generate linear polymers with defined chain lengths.","definition_xrefs":["PMID:26216239","PMID:12135472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_00580":null,"SJAG_01865":null,"SJAG_02163":null,"SJAG_03352":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"prenyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"IPPS activity","type":"exact"},{"name":"isoprenyl pyrophosphate synthase activity","type":"exact"}],"termid":"GO:0120531","terms_by_termid":{"GO:0004311":null,"GO:0004337":null,"GO:0006743":null,"GO:0006744":null,"GO:0045547":null,"GO:0097269":null}}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: FYPO:0000262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells do not respond normally to reactive oxygen species, resulting in accumulation of oxidative damage including DNA damage, during G0 phase.","definition_xrefs":["PMID:19197239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to reactive oxygen species during G0","synonyms":[{"name":"abnormal cellular response to reactive oxygen species during cell quiescence","type":"exact"},{"name":"abnormal cellular response to reactive oxygen species during quiescence","type":"exact"},{"name":"protects against physiological oxidative damage in G0","type":"related"}],"termid":"FYPO:0000262"}


id: PBO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VI","termid":"PBO:0060340"}


id: MONDO:1011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumour that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilms tumor, non-human animal","termid":"MONDO:1011439"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, dog","secondary_identifiers":["OMIA:001142-9615"],"termid":"MONDO:1011620","xrefs":{"Monarch":{"xref_id":"1011620"}}}


id: MONDO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small, benign, bone-forming neoplasm that can arise from any bone but more frequently affects the long bones. The central portion of the neoplasm (nidus) contains differentiated osteoblasts which produce osteoid and sometimes bone. The lesion is usually surrounded by hypervascular sclerotic bone and has limited growth potential. Clinical signs and symptoms include pain and localized tenderness, at the site of the lesion. The pain may be intense but in the majority of cases it is completely alleviated by non-steroidal anti-inflammatory drugs. Prognosis is excellent and recurrences are rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"benign osteogenic neoplasm","termid":"MONDO:0045052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoid osteoma","secondary_identifiers":["ICDO:9191/0","MEDGEN:18221","UMLS:C0029441","OMIM:259550","NCIT:C3297","MESH:D010017","SCTID:302859004","HP:0030433"],"synonyms":[{"name":"osteoid osteoma","type":"exact"},{"name":"osteoid osteoma (disease)","type":"exact"}],"termid":"MONDO:0009808","xrefs":{"Monarch":{"xref_id":"0009808"}}}


id: PBO:0110509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like, pseudogene","termid":"PBO:0110509"}


id: PBO:0058012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3938","termid":"PBO:0058012"}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: PBO:0073582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3KBP1 binding protein 1","termid":"PBO:0073582"}


id: MONDO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overlap myositis (OM) is a form of idiopathic inflammatory myopathy (IIM) characterized by myositis with at least one clinical and/or autoantibody overlap feature.","definition_xrefs":["Orphanet:206572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"overlap myositis","secondary_identifiers":["GARD:20352","MEDGEN:1814440","UMLS:C5679784"],"synonyms":[{"name":"adult-onset overlap myositis","type":"exact"},{"name":"non-specific myositis","type":"exact"}],"termid":"MONDO:0016099","xrefs":{"Monarch":{"xref_id":"0016099"}}}


id: PBO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase","termid":"PBO:0090227"}


id: PBO:0068801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 38, pseudogene","termid":"PBO:0068801"}


id: MONDO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioblastoma that arises from the retina. It is typically a sign of von Hippel-Lindau disease. It may also be seen as an isolated entity without systemic involvement.","definition_xrefs":["NCIT:C39783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"hemangioma of retina","termid":"MONDO:0021541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal hemangioblastoma","secondary_identifiers":["DOID:5240","MEDGEN:152677","UMLS:C0730303"],"synonyms":[{"name":"hemangioblastoma of vasculature of retina","type":"exact"},{"name":"retinal capillary hemangioblastoma","type":"exact"},{"name":"retinal hemangioblastoma","type":"exact"},{"name":"vasculature of retina hemangioblastoma","type":"exact"}],"termid":"MONDO:0003343","xrefs":{"Monarch":{"xref_id":"0003343"}}}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["PMID:14759368","PMID:15260980","GOC:vw","PMID:21385875"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: GO:0004812
data:
  {"annotated_genes":["SJAG_04856","SJAG_04840","SJAG_00243","SJAG_01197","SJAG_00653","SJAG_03277","SJAG_01797","SJAG_02517","SJAG_04738","SJAG_02428","SJAG_00488","SJAG_16456","SJAG_01259","SJAG_01235","SJAG_00420","SJAG_01352","SJAG_03626","SJAG_04482","SJAG_01159","SJAG_02615","SJAG_03545","SJAG_04762","SJAG_00103","SJAG_01522","SJAG_04473","SJAG_02263","SJAG_03585","SJAG_03071","SJAG_02236","SJAG_04285","SJAG_02015","SJAG_04409","SJAG_02977","SJAG_00443","SJAG_02206","SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68941],"is_not":false,"summary":null,"term":"GO:0004812"},{"annotations":[75749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004813"},{"annotations":[76428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004814"},{"annotations":[105087,102274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004816"},{"annotations":[76683,76560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004815"},{"annotations":[72338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004817"},{"annotations":[70139,72711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004818"},{"annotations":[80029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004819"},{"annotations":[72774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004820"},{"annotations":[78768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004821"},{"annotations":[71469,75160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004822"},{"annotations":[77930,75763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004823"},{"annotations":[73418,71662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004824"},{"annotations":[78112,69229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004825"},{"annotations":[78863,77381,78532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004826"},{"annotations":[77194,70357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004827"},{"annotations":[72880,76749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004828"},{"annotations":[73486,70546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004829"},{"annotations":[71202,69930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004830"},{"annotations":[78694,70576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004831"},{"annotations":[69701,69951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004832"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a 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id: PBO:0055074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2491","termid":"PBO:0055074"}


id: GO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome maturation","termid":"GO:0090382"}


id: PR:Q9USV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrd3 gene.","definition_xrefs":["UniProtKB:Q9USV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.08c","synonyms":[{"name":"Spom972h-hrd3","type":"exact"}],"termid":"PR:Q9USV0"}


id: MONDO:0006682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the brachial plexus. It results in severe pain in the upper extremity and shoulder, upper arm weakness and loss of sensation in the upper arm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuritis","secondary_identifiers":["MedDRA:10073002","ICD9:723.4","EFO:1000843","MEDGEN:113170","NCIT:C84600","MESH:D020968","SCTID:26609002","DOID:3689","SCTID:72893007","UMLS:C0221759"],"synonyms":[{"name":"acute brachial neuritis","type":"related"},{"name":"acute brachial neuritis syndrome","type":"related"},{"name":"acute brachial radiculitis syndrome","type":"related"},{"name":"acute shoulder neuritis","type":"related"},{"name":"brachial nerve plexus neuritis","type":"exact"},{"name":"brachial neuritis","type":"exact"},{"name":"idiopathic neuralgic amyotrophy","type":"related"},{"name":"neuritis of brachial nerve plexus","type":"exact"},{"name":"parsonage Turner syndrome","type":"related"},{"name":"parsonage-Aldren-Turner syndrome","type":"exact"}],"termid":"MONDO:0006682","xrefs":{"Monarch":{"xref_id":"0006682"}}}


id: PBO:0060284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 1","termid":"PBO:0060284"}


id: PBO:0057320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-1","termid":"PBO:0057320"}


id: MONDO:0020159
data:
  {"annotated_genes":["SJAG_03457","SJAG_00516","SJAG_00212","SJAG_01471","SJAG_02399","SJAG_00660","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87193,87194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[86776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[86775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[85960,85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital entropion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:20392000","Orphanet:98568","MEDGEN:540011","MedDRA:10014923","UMLS:C0266579"],"termid":"MONDO:0020159","terms_by_termid":{"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0020159"}}}


id: PBO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 7.9x10^3 min-1 M-1","termid":"PBO:0015671"}


id: GO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart capillary growth","termid":"GO:0003248"}


id: PBO:0034146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neoteny_relationship_with","termid":"PBO:0034146"}


id: GO:0072245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular parietal epithelial cell. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}


id: PBO:0079241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 14","termid":"PBO:0079241"}


id: GO:0061823
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-like structure observed at the base of the ciliary cap of insect spermatids. This structure may anchor the axoneme to the ciliary cap membrane and/or act as a diffusion barrier, proposed to be analogous to the annulus of mammalian sperm flagellum.","definition_xrefs":["PMID:25447994","PMID:4903810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ring centriole","termid":"GO:0061823"}


id: FYPO:0007221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 18 of histone H3 in regions containing protein-coding genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:31260531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K18 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"normal histone H3-K18 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K18 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"normal histone H3K18 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007221"}


id: PR:O42848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1602 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.11","synonyms":[{"name":"Spom972h-rpl1602","type":"exact"}],"termid":"PR:O42848"}


id: GO:0050290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide 1-phosphate + choline + H+.","definition_xrefs":["RHEA:20984","EC:3.1.4.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase D activity","secondary_identifiers":["KEGG_REACTION:R02542","MetaCyc:SPHINGOMYELIN-PHOSPHODIESTERASE-D-RXN"],"synonyms":[{"name":"sphingomyelin ceramide-phosphohydrolase activity","type":"related"},{"name":"sphingomyelinase D","type":"related"}],"termid":"GO:0050290"}


id: GO:0019218
data:
  {"annotated_genes":["SJAG_01307","SJAG_02104","SJAG_04018","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[109865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[75498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88518,105856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid metabolism","type":"exact"}],"termid":"GO:0019218","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0074455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine oxidase","termid":"PBO:0074455"}


id: FYPO:0001650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased lysine import","synonyms":[{"name":"decreased L-lysine import","type":"exact"},{"name":"decreased L-lysine import across plasma membrane","type":"exact"},{"name":"decreased lysine import into cell","type":"exact"},{"name":"decreased lysine uptake","type":"exact"},{"name":"reduced lysine import","type":"exact"}],"termid":"FYPO:0001650"}


id: GO:1905717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"positively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cornification","synonyms":[{"name":"activation of cornification","type":"narrow"},{"name":"up regulation of cornification","type":"exact"},{"name":"up-regulation of cornification","type":"exact"},{"name":"upregulation of cornification","type":"exact"}],"termid":"GO:1905717"}


id: MONDO:0400002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The ingestion of excessive calcium supplementation or calcium containing antacids, and alkali resulting in a triad of hypercalcemia, metabolic alkalosis, and renal insufficiency.","definition_xrefs":["PMID:24288027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcium-alkali syndrome","secondary_identifiers":["UMLS:C0026141","MEDGEN:6403"],"synonyms":[{"name":"milk-alkali syndrome","type":"exact"}],"termid":"MONDO:0400002","xrefs":{"Monarch":{"xref_id":"0400002"}}}


id: PBO:0053801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1056","termid":"PBO:0053801"}


id: MONDO:0013585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hydrolethalus syndrome in which the cause of the disease is a mutation in the KIF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolethalus syndrome","termid":"MONDO:0006037"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome 2","secondary_identifiers":["GARD:15759","OMIM:614120","DOID:0111356","MEDGEN:481529","UMLS:C3279899"],"synonyms":[{"name":"HLS2","type":"related"},{"name":"KIF7 hydrolethalus syndrome","type":"exact"},{"name":"hydrolethalus syndrome 2","type":"exact"},{"name":"hydrolethalus syndrome caused by mutation in KIF7","type":"exact"},{"name":"hydrolethalus syndrome type 2","type":"exact"}],"termid":"MONDO:0013585","xrefs":{"Monarch":{"xref_id":"0013585"}}}


id: PBO:0073183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein N","termid":"PBO:0073183"}


id: PBO:0087902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; required for flocculation, diploid filamentous growth, and haploid invasive growth; forms a heterodimer with Mss11p that interacts with the Swi/Snf complex during transcriptional activation of FLO1, FLO11, and STA1; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 142, which in other strains encodes tryptophan","termid":"PBO:0087902"}


id: MONDO:0017454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triphalangeal thumb-polysyndactyly syndrome (TPT-PS) is a hand-foot malformation characterized by triphalangeal thumbs and pre- and postaxial polydactyly, isolated syndactyly or complex polysyndactyly.","definition_xrefs":["Orphanet:2950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb-polysyndactyly syndrome","secondary_identifiers":["MEDGEN:1830424","UMLS:C5779878","OMIM:190605"],"synonyms":[{"name":"TPT-PS syndrome","type":"exact"}],"termid":"MONDO:0017454","xrefs":{"Monarch":{"xref_id":"0017454"}}}


id: SO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified selenocysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_selenocysteine","secondary_identifiers":["MOD:01158"],"synonyms":[{"name":"modified L selenocysteine","type":"exact"},{"name":"modified L-selenocysteine","type":"exact"}],"termid":"SO:0001402"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000138","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: GO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer composed of the chi and psi subunits which is a subassembly of the DNA polymerase III clamp loader complex and serves as a bridge between the DnaX complex and the single-stranded DNA-binding protein (SSB).","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III, clamp loader complex","termid":"GO:0043846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader chi/psi subcomplex","synonyms":[{"name":"DNA polymerase III, DnaX complex, chi/psi subcomplex","type":"exact"}],"termid":"GO:0043847"}


id: GO:0021807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of soluble factors and receptors that result in the movement of cells in the primitive cerebral cortex.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"initiation of movement involved in cerebral cortex radial glia guided migration","termid":"GO:0021806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"motogenic signaling initiating cell movement in cerebral cortex","synonyms":[{"name":"motogenic signalling initiating cell movement in the cerebral cortex","type":"exact"}],"termid":"GO:0021807"}


id: GO:0006869
data:
  {"annotated_genes":["SJAG_02114","SJAG_03746","SJAG_01225","SJAG_03050","SJAG_04413","SJAG_04370","SJAG_03718","SJAG_00576","SJAG_03774","SJAG_16459","SJAG_02516","SJAG_02957","SJAG_00589","SJAG_01095","SJAG_00355","SJAG_00587","SJAG_03690","SJAG_05268","SJAG_00261","SJAG_01731","SJAG_01722","SJAG_01407","SJAG_04734","SJAG_02943","SJAG_03172","SJAG_01470","SJAG_03338","SJAG_01437","SJAG_02581","SJAG_01590","SJAG_06440","SJAG_03416","SJAG_00669","SJAG_00176","SJAG_01305","SJAG_03721","SJAG_02375","SJAG_02132","SJAG_01945","SJAG_02897","SJAG_00018","SJAG_05209","SJAG_01229","SJAG_01116","SJAG_03710","SJAG_03851","SJAG_02323","SJAG_00230","SJAG_03741","SJAG_01329","SJAG_03209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[74583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[73265,73557,74042,109634,117543,72925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[76876,94393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[109378,102615,111343,108218,94216,116245,57465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120009"},{"annotations":[105862,100526,107661,97541,108667,109540,90866,106753,104045,107535,101286,116268,89183,97480,98627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[106342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[71882,77099,62189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[90486,109526,59909,72815,62608,72786,74411,90481,74592,90479,101288,90484,90487,90482,90483,102220,71859,90485,90480,99474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[108221,102617,109380,111345,116248,94219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00176":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lipid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1369062"],"termid":"GO:0006869","terms_by_termid":{"GO:0015917":null,"GO:0015918":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140331":null}}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: GO:0044177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi apparatus","synonyms":[{"name":"host Golgi apparatus","type":"exact"}],"termid":"GO:0044177"}


id: GO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["RHEA:17389","EC:1.1.1.250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.250-RXN","KEGG_REACTION:R07134"],"synonyms":[{"name":"D-arabinitol 2-dehydrogenase (ribulose-forming) activity","type":"related"},{"name":"D-arabinitol:NAD+ 2-oxidoreductase (D-ribulose-forming)","type":"related"}],"termid":"GO:0047038"}


id: MONDO:0014993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibrillar myopathy in which the cause of the disease is a mutation in the PYROXD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 8","secondary_identifiers":["MEDGEN:934612","UMLS:C4310645","DOID:0080308","OMIM:617258"],"synonyms":[{"name":"MFM8","type":"related"},{"name":"PYROXD1 myofibrillar myopathy (disease)","type":"exact"},{"name":"myofibrillar myopathy (disease) caused by mutation in PYROXD1","type":"exact"},{"name":"myofibrillar myopathy 8","type":"exact"},{"name":"myopathy, myofibrillar, 8","type":"exact"},{"name":"myopathy, myofibrillar, type 8","type":"exact"}],"termid":"MONDO:0014993","xrefs":{"Monarch":{"xref_id":"0014993"}}}


id: GO:0033312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate geranylgeranyl-chlorophyll a.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via geranylgeranyl-chlorophyll a","synonyms":[{"name":"chlorophyll a anabolism via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a biosynthesis via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a formation via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a synthesis via geranylgeranyl-chlorophyll a","type":"exact"}],"termid":"GO:0033312"}


id: FYPO:0004535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a smaller volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small spore","termid":"FYPO:0000307"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable small spore with abnormal shape","synonyms":[{"name":"inviable small abnormally shaped spore","type":"exact"},{"name":"inviable small spore with abnormal morphology","type":"exact"},{"name":"inviable spore with decreased size and abnormal shape","type":"related"},{"name":"inviable spore with decreased spore size and abnormal shape","type":"related"},{"name":"inviable spore with decreased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with decreased volume and abnormal shape","type":"exact"},{"name":"lethal; small spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, small misshapen spores","type":"related"},{"name":"spore germination abolished, small spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and decreased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and decreased cell volume","type":"exact"}],"termid":"FYPO:0004535"}


id: GO:0048646
data:
  {"annotated_genes":["SJAG_01769","SJAG_04275","SJAG_04922","SJAG_04901","SJAG_05309","SJAG_02989","SJAG_03013","SJAG_03915","SJAG_03536","SJAG_00405","SJAG_02529","SJAG_04010","SJAG_03090","SJAG_00993","SJAG_01662","SJAG_03483","SJAG_01943","SJAG_01993","SJAG_04853","SJAG_04080","SJAG_01483","SJAG_01894","SJAG_02700","SJAG_02712","SJAG_03587","SJAG_00514","SJAG_03453","SJAG_02241","SJAG_04238","SJAG_04781","SJAG_02736","SJAG_02379","SJAG_03250","SJAG_04483","SJAG_01794","SJAG_04236","SJAG_02718","SJAG_03557","SJAG_00821","SJAG_03688","SJAG_04509","SJAG_00971","SJAG_03057","SJAG_02248","SJAG_04859","SJAG_01531","SJAG_00663","SJAG_04615","SJAG_02169","SJAG_02320","SJAG_00974","SJAG_00486","SJAG_01321","SJAG_00114","SJAG_03746","SJAG_04271","SJAG_01017","SJAG_00826","SJAG_02864","SJAG_04184","SJAG_04868","SJAG_04140","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96921,105135,96498,100728,111526,112725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[111331,93987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88165,88658,90207,91737],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[72905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[117819,104172,109086,114101,117811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[72906,91467,104986],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[91256,105302,101714,110130,118562,99902,119044,98826,118863,113948,95343,97578,97539,107398],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[96854,99834,104130,92259,99835,106846,113949,107732,102921,97540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[98284,98896,98978,114340,92480,88212],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[111214],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102294],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90691],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[87849,89824,111381,93448,90811],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[92156],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[116955],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[99836,94475,100117,115997,99837,106026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. 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id: PBO:0084679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ATP-dependent RNA helicase of the DEAD-box family; required for assembly of the large subunit of mitochondrial ribosomes; binds to the large subunit rRNA, 21S_rRNA; localizes to the matrix face of the mitochondrial inner membrane and associates with the large subunit precursor and with mature ribosomes","termid":"PBO:0084679"}


id: MONDO:1011285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic retinal atrophy in dogs due to a mutation in the BBS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic retinal atrophy, BBS2-related, dog","secondary_identifiers":["OMIA:002484-9615"],"synonyms":[{"name":"Bardet-Biedl syndrome 2, dog","type":"related"}],"termid":"MONDO:1011285","xrefs":{"Monarch":{"xref_id":"1011285"}}}


id: PBO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTPase Nog2 (predicted)","termid":"PBO:0032738"}


id: PBO:0036358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga9 (predicted)","termid":"PBO:0036358"}


id: GO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TDP catabolic process","synonyms":[{"name":"TDP breakdown","type":"exact"},{"name":"TDP catabolism","type":"exact"},{"name":"TDP degradation","type":"exact"}],"termid":"GO:0006245"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: PBO:0030995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress_during_vegetative_growth","termid":"PBO:0030995"}


id: GO:0097551
data:
  {"annotated_genes":["SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in mitochondrial DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.","definition_xrefs":["PMID:22214610","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"mitochondrial double-strand break repair","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mtDSB repair","type":"exact"}],"termid":"GO:0097551","terms_by_termid":{"GO:0097552":null}}


id: FYPO:0007410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more residues within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II is abnormal.","definition_xrefs":["PomBase:mah","GO:0070816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA polymerase II C-terminal domain phosphorylation","synonyms":[{"name":"abnormal phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"FYPO:0007410"}


id: PBO:0055384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2814","termid":"PBO:0055384"}


id: GO:0047649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol + ATP = 1-alkyl-sn-glycerol 3-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.93","RHEA:16937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"alkylglycerol kinase activity","secondary_identifiers":["KEGG_REACTION:R04126","MetaCyc:ALKYLGLYCEROL-KINASE-RXN"],"synonyms":[{"name":"1-alkylglycerol kinase (phosphorylating)","type":"related"},{"name":"ATP-alkylglycerol phosphotransferase activity","type":"related"},{"name":"ATP:1-O-alkyl-sn-glycerol 3-phosphotransferase activity","type":"related"},{"name":"ATP:1-alkyl-sn-glycerol phosphotransferase activity","type":"related"},{"name":"alkylglycerol phosphotransferase activity","type":"related"}],"termid":"GO:0047649"}


id: PBO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 3 pseudogene","termid":"PBO:0062153"}


id: GO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules.","definition_xrefs":["PMID:19878874","CL:0000182","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte homeostasis","termid":"GO:0036333"}


id: MOD:01286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C,1x(15)N isotope labeled L-isoleucine.","definition_xrefs":["Unimod:695#I","PubMed:11999733","PubMed:12175151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"6x(13)C,1x(15)N labeled residue","termid":"MOD:01370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled L-isoleucine","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01286"}


id: PBO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 8","termid":"PBO:0070451"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["PMID:23826995","GO_REF:0000071","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: GO:0098598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vocalisation behavior that is the result of learning, or the process by which new vocalizations are learned.","definition_xrefs":["GOC:BHF","PMID:17035521","GOC:rl","PMID:16418265","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}


id: MONDO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult astrocytic tumor","termid":"MONDO:0002503"},{"relation_name":"is_a","term_name":"adult brainstem glioma","termid":"MONDO:0003153"},{"relation_name":"is_a","term_name":"brain stem astrocytic neoplasm","termid":"MONDO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brainstem astrocytoma","secondary_identifiers":["DOID:5922","MEDGEN:233962","UMLS:C1332191","NCIT:C6954"],"synonyms":[{"name":"adult brain stem astrocytoma","type":"exact"},{"name":"adult brainstem astrocytoma","type":"exact"}],"termid":"MONDO:0003706","xrefs":{"Monarch":{"xref_id":"0003706"}}}


id: PBO:0086234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Sin3p in a two-hybrid assay; part of a large protein complex with Sin3p and Stb1p; STB2 has a paralog, STB6, that arose from the whole genome duplication","termid":"PBO:0086234"}


id: PBO:0090532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase","termid":"PBO:0090532"}


id: GO:1903507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GOC:txnOH","GOC:vw","GO_REF:0000058","GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nucleic acid-templated transcription (obsolete GO:1903507)","synonyms":[{"name":"down regulation of nucleic acid-templated transcription","type":"exact"},{"name":"down-regulation of nucleic acid-templated transcription","type":"exact"},{"name":"downregulation of nucleic acid-templated transcription","type":"exact"},{"name":"inhibition of nucleic acid-templated transcription","type":"narrow"}],"termid":"GO:1903507"}


id: MONDO:0017827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant peripheral nerve sheath tumor (MPNST) is a rare and often aggressive soft tissue sarcoma occurring in a wide range of anatomical sites.","definition_xrefs":["Orphanet:3148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peripheral nerve sheath tumor","secondary_identifiers":["ICDO:9560/3","MEDGEN:155614","NANDO:2200102","ICD9:171.9","icd11.foundation:71413945","ONCOTREE:MPNST","EFO:0000760","SCTID:404037002","UMLS:C0751690","GARD:10872","NCIT:C3798","MedDRA:10029236","DOID:5940","ICDO:9540/3"],"synonyms":[{"name":"MPNST","type":"exact"},{"name":"Malig. periph. nerve sheath tum.","type":"exact"},{"name":"malignant neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant neurilemmoma","type":"exact"},{"name":"malignant neurilemoma","type":"exact"},{"name":"malignant neurofibroma","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant peripheral nerve sheath tumor","type":"exact"},{"name":"malignant peripheral nerve sheath tumor (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumour (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumour [dup] (morphologic abnormality)","type":"exact"},{"name":"malignant schwannoma","type":"exact"},{"name":"malignant tumor of peripheral nerve sheath","type":"exact"},{"name":"malignant tumor of the peripheral nerve sheath","type":"exact"},{"name":"malignant tumour of peripheral nerve sheath","type":"exact"},{"name":"malignant tumour of the peripheral nerve sheath","type":"exact"},{"name":"neurofibrosarcoma","type":"broad"},{"name":"neurofibrosarcoma, malignant","type":"exact"},{"name":"neurogenic sarcoma","type":"exact"},{"name":"schwannoma, malignant","type":"exact"}],"termid":"MONDO:0017827","xrefs":{"Monarch":{"xref_id":"0017827"}}}


id: PBO:0075778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 4","termid":"PBO:0075778"}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11024061","RESID:AA0298","PubMed:11041839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: MONDO:0012070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant Charcot-Marie-Tooth disease type 2G (obsolete MONDO:0012070)","termid":"MONDO:0012070","xrefs":{"Monarch":{"xref_id":"0012070"}}}


id: PBO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 14","termid":"PBO:0070758"}


id: MONDO:0021962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baetz-greenwalt syndrome","secondary_identifiers":["UMLS:C2931615","MEDGEN:444099","MESH:C537795"],"synonyms":[{"name":"hypoplastic right-sided heart complex","type":"related"}],"termid":"MONDO:0021962","xrefs":{"Monarch":{"xref_id":"0021962"}}}


id: PBO:0076900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 54","termid":"PBO:0076900"}


id: PBO:0028025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_meiosis","termid":"PBO:0028025"}


id: MONDO:1010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, dog","secondary_identifiers":["OMIA:000528-9615"],"termid":"MONDO:1010598","xrefs":{"Monarch":{"xref_id":"1010598"}}}


id: PBO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin A2","termid":"PBO:0042178"}


id: MONDO:0007601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial Mediterranean fever","termid":"MONDO:0018088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial Mediterranean fever, autosomal dominant","secondary_identifiers":["MEDGEN:341987","MESH:C565021","UMLS:C1851347","OMIM:134610","GARD:15069"],"synonyms":[{"name":"Fmf, autosomal dominant","type":"related"},{"name":"familial Mediterranean fever, AD","type":"exact"},{"name":"familial Mediterranean fever, autosomal dominant","type":"exact"}],"termid":"MONDO:0007601","xrefs":{"Monarch":{"xref_id":"0007601"}}}


id: PBO:0048739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 1","termid":"PBO:0048739"}


id: PBO:0088204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2-Cys6 zinc-finger transcription factor; activates genes involved in multidrug resistance; paralog of Yrm1p, acting on an overlapping set of target genes; YRR1 has a paralog, PDR8, that arose from the whole genome duplication","termid":"PBO:0088204"}


id: MONDO:0024663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"skin meningioma","termid":"MONDO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary skin meningioma","secondary_identifiers":["MEDGEN:235494","NCIT:C5277","UMLS:C1335481"],"synonyms":[{"name":"primary cutaneous meningioma","type":"exact"},{"name":"primary meningioma of skin","type":"exact"},{"name":"primary meningioma of the skin","type":"exact"},{"name":"primary skin meningioma","type":"exact"}],"termid":"MONDO:0024663","xrefs":{"Monarch":{"xref_id":"0024663"}}}


id: PBO:0012582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Wall Lysis","termid":"PBO:0012582"}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: MONDO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic bacterial infectious disease","secondary_identifiers":["DOID:0050340"],"termid":"MONDO:0000316","xrefs":{"Monarch":{"xref_id":"0000316"}}}


id: GO:1901016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"regulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901016"}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GO_REF:0000060","PMID:22521784","GOC:TermGenie","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: PBO:0078595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 8, Y-linked","termid":"PBO:0078595"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: PBO:0066852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 152","termid":"PBO:0066852"}


id: PBO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 2","termid":"PBO:0060497"}


id: GO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + CoA = AMP + diphosphate + biotinyl-CoA.","definition_xrefs":["MetaCyc:BIOTIN--COA-LIGASE-RXN","EC:6.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"biotin-CoA ligase activity","secondary_identifiers":["RHEA:19681"],"synonyms":[{"name":"biotin CoA synthetase activity","type":"related"},{"name":"biotin:CoA ligase (AMP-forming)","type":"related"},{"name":"biotinyl coenzyme A synthetase activity","type":"related"},{"name":"biotinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047707"}


id: PBO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_miconazole","termid":"PBO:0030758"}


id: PBO:0017452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mereotopologically_related_to","termid":"PBO:0017452"}


id: FYPO:0005368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of iron ion starvation-induced proteins","synonyms":[{"name":"decreased level of iron ion depletion-induced proteins","type":"exact"},{"name":"decreased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"decreased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"decreased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"decreased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"decreased level of proteins induced by iron ion starvation","type":"exact"},{"name":"decreased protein level of genes (normally) induced during iron starvation","type":"exact"},{"name":"reduced level of iron ion starvation-induced proteins","type":"exact"}],"termid":"FYPO:0005368"}


id: MONDO:0004587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary night blindness (obsolete MONDO:0004587)","termid":"MONDO:0004587","xrefs":{"Monarch":{"xref_id":"0004587"}}}


id: PBO:0076979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine hydroxylase","termid":"PBO:0076979"}


id: GO:0031591
data:
  {"annotated_genes":["SJAG_01261","SJAG_04265","SJAG_05334","SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72142,73720,74943,94673],"is_not":false,"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["GOC:hjd","RNAmods:037","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"wybutosine metabolic process","termid":"GO:0031590"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"wybutosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"yW biosynthesis","type":"exact"},{"name":"yW biosynthetic process","type":"exact"}],"termid":"GO:0031591","terms_by_termid":{"GO:0031591":null}}


id: MONDO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine metabolic disorder (obsolete MONDO:0000475)","termid":"MONDO:0000475","xrefs":{"Monarch":{"xref_id":"0000475"}}}


id: GO:0009009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of new phosphodiester bonds between a pair of short, unique target DNA sequences.","definition_xrefs":["GOC:elh","PMID:6286142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrase activity","termid":"GO:0008907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"site-specific recombinase activity","synonyms":[{"name":"RecA-family recombinase activity","type":"exact"}],"termid":"GO:0009009"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: PR:Q9UU95
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug128 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 128 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.04c","synonyms":[{"name":"Spom972h-mug128","type":"exact"}],"termid":"PR:Q9UU95"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: MONDO:1011125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"priapism, non-human animal","termid":"MONDO:1010280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, dog","secondary_identifiers":["OMIA:001166-9615"],"termid":"MONDO:1011125","xrefs":{"Monarch":{"xref_id":"1011125"}}}


id: GO:0031112
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule polymerization or depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"positively_regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule polymerization or depolymerization","type":"narrow"},{"name":"stimulation of microtubule polymerization or depolymerization","type":"narrow"},{"name":"up regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"up-regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"upregulation of microtubule polymerization or depolymerization","type":"exact"}],"termid":"GO:0031112","terms_by_termid":{"GO:0031117":null}}


id: PBO:0071798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1, 2 pseudogene","termid":"PBO:0071798"}


id: PBO:0033817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator Sak1","termid":"PBO:0033817"}


id: PBO:0058689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6817","termid":"PBO:0058689"}


id: PATO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-localised","synonyms":[{"name":"multi-focal","type":"exact"}],"termid":"PATO:0001791"}


id: PBO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member C","termid":"PBO:0046887"}


id: PBO:0061082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKX2-1 antisense RNA 1","termid":"PBO:0061082"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: PBO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 163","termid":"PBO:0075114"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: PBO:0041219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 specific chaperone 1","termid":"PBO:0041219"}


id: PBO:0034457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_MCB_promoters","termid":"PBO:0034457"}


id: PBO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1 (predicted)","termid":"PBO:0005274"}


id: PBO:0076051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin domain containing 1","termid":"PBO:0076051"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_03438","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89016],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[107982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006310","GO:0140013","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: GO:0035804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg coat. An egg coat is a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","PMID:16944418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of egg coat","synonyms":[{"name":"structural constituent of vitelline envelope","type":"narrow"},{"name":"structural constituent of zona pellucida","type":"narrow"}],"termid":"GO:0035804"}


id: PBO:0040520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-glycoprotein 1, zinc-binding","termid":"PBO:0040520"}


id: PBO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 7","termid":"PBO:0071349"}


id: MONDO:0018703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated splenogonadal fusion","secondary_identifiers":["GARD:21903","Orphanet:457083"],"synonyms":[{"name":"SGF","type":"exact"}],"termid":"MONDO:0018703","xrefs":{"Monarch":{"xref_id":"0018703"}}}


id: MONDO:1011596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe combined immunodeficiency disease, dog","secondary_identifiers":["OMIA:000220-9615"],"termid":"MONDO:1011596","xrefs":{"Monarch":{"xref_id":"1011596"}}}


id: PBO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-conjugate-exporting ATPase Abc2","termid":"PBO:0001764"}


id: GO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercury ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mercury ion","termid":"GO:0046689"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mercury ion","synonyms":[{"name":"cellular response to mercuric ion","type":"exact"},{"name":"cellular response to mercury","type":"exact"}],"termid":"GO:0071288"}


id: MONDO:0800210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, l","synonyms":[{"name":"GLC1L","type":"exact"}],"termid":"MONDO:0800210","xrefs":{"Monarch":{"xref_id":"0800210"}}}


id: MONDO:0017323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic rickets is a group of genetic diseases characterized by hypocalcemia and rickets. It comprises hypocalcemic vitamin D dependent rickets (VDDR-I) and hypocalcemic vitamin D resistant rickets (HVDRR).","definition_xrefs":["Orphanet:289103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"disorders of vitamin D metabolism","termid":"MONDO:0017322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypocalcemic rickets","secondary_identifiers":["GARD:21133","NCIT:C131421","SCTID:722947004","UMLS:C4302195","MEDGEN:927864"],"synonyms":[{"name":"Calciopenic rickets","type":"exact"},{"name":"calcium deficiency rickets","type":"exact"}],"termid":"MONDO:0017323","xrefs":{"Monarch":{"xref_id":"0017323"}}}


id: MONDO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a newborn infant up to 28 days old.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal candidiasis","secondary_identifiers":["UMLS:C0276682","ICD10CM:P37.5","DOID:9577","ICD9:771.7","NCIT:C116810","SCTID:414821002","MEDGEN:547484"],"synonyms":[{"name":"neonatal Candida infection","type":"exact"},{"name":"neonatal Monilia infection","type":"exact"},{"name":"neonatal candida infection","type":"exact"},{"name":"neonatal moniliasis","type":"exact"}],"termid":"MONDO:0004824","xrefs":{"Monarch":{"xref_id":"0004824"}}}


id: SO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small cytoplasmic RNA (scRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_encoding","synonyms":[{"name":"scRNA encoding","type":"exact"}],"termid":"SO:0000575"}


id: GO:0019133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + 2 reduced ferredoxin + O2 + 2 H+ = betaine aldehyde hydrate + 2 oxidized ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"choline monooxygenase activity","secondary_identifiers":["RHEA:17769","MetaCyc:RXN1F-357"],"synonyms":[{"name":"choline,reduced-ferredoxin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0019133"}


id: MONDO:0013005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SeSAME syndrome is characterized by seizures, sensorineural deafness, ataxia, intellectual deficit, and electrolyte imbalance (hypokalemia, metabolic alkalosis, and hypomagnesemia).","definition_xrefs":["Orphanet:199343"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"EAST syndrome","secondary_identifiers":["MEDGEN:411243","GARD:10514","OMIM:612780","SCTID:721207002","MESH:C557674","UMLS:C2748572","DOID:0060484"],"synonyms":[{"name":"EAST syndrome","type":"exact"},{"name":"SESAMES","type":"related"},{"name":"epilepsy, ataxia, sensorineural deafness and tubulopathy","type":"exact"},{"name":"epilepsy, ataxia, sensorineural deafness, and tubulopathy","type":"related"},{"name":"seizures - sensorineural deafness - ataxia - intellectual disability - electrolyte imbalance","type":"related"},{"name":"seizures, sensorineural deafness, ataxia, intellectual disability and electrolyte imbalance","type":"exact"},{"name":"seizures, sensorineural deafness, ataxia, intellectual disability, and electrolyte imbalance","type":"related"},{"name":"seizures, sensorineural deafness, ataxia, mental retardation and electrolyte imbalance","type":"exact"},{"name":"seizures, sensorineural deafness, ataxia, mental retardation, and electrolyte imbalance","type":"related"},{"name":"seizures-sensorineural deafness-ataxia-intellectual disability-electrolyte imbalance syndrome","type":"exact"},{"name":"sesame syndrome","type":"exact"}],"termid":"MONDO:0013005","xrefs":{"Monarch":{"xref_id":"0013005"}}}


id: PBO:0038503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 12","termid":"PBO:0038503"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: PBO:0070065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 22, pseudogene","termid":"PBO:0070065"}


id: PBO:0082823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear RNA-binding protein; specifically binds to transcribed chromatin in a THO- and RNA-dependent manner, genetically interacts with shuttling hnRNP NAB2; overproduction suppresses transcriptional defect caused by hpr1 mutation","termid":"PBO:0082823"}


id: PBO:0059555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Trp (UGA/G)","termid":"PBO:0059555"}


id: MONDO:0009063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly-cystic kidney disease","secondary_identifiers":["OMIM:219730","Orphanet:443988","UMLS:C1857423","GARD:17757","DOID:0111625","MEDGEN:346584"],"synonyms":[{"name":"VMCKD","type":"exact"},{"name":"congenital nephrosis-cerebral ventriculomegaly syndrome","type":"exact"},{"name":"ventriculomegaly with cystic kidney disease","type":"related"}],"termid":"MONDO:0009063","xrefs":{"Monarch":{"xref_id":"0009063"}}}


id: PBO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.3","termid":"PBO:0001857"}


id: PBO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin ortholog, involved in splicing Pnn1 (predicted)","termid":"PBO:0002876"}


id: PBO:0055818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing preferred translocation partner in lipoma","termid":"PBO:0055818"}


id: PBO:0039892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor alpha","termid":"PBO:0039892"}


id: PBO:0068220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 527","termid":"PBO:0068220"}


id: PBO:0113318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in sphingolipid metabolism; localizes to vacuolar contact sites with mitochondria, ER and peroxisomes; mutant has enhanced sensitivity to overexpression of mutant huntingtin; relative distribution within the vacuolar membrane changes upon DNA replication stress","termid":"PBO:0113318"}


id: PBO:0026942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_cell_cycle","termid":"PBO:0026942"}


id: GO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the cytoplasm.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005694"],"is_obsolete":false,"name":"cytoplasmic origin of replication recognition complex","synonyms":[{"name":"cytoplasmic ORC","type":"exact"},{"name":"prokaryotic ORC","type":"related"}],"termid":"GO:0000809"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["UniProtKB:Q9P332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_00845","SJAG_00661","SJAG_00596","SJAG_02022","SJAG_04461","SJAG_03637","SJAG_00333","SJAG_01799","SJAG_00236","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91106,94554,95635,104538,113068,118816],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[93711,100175,105370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[103703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null}}


id: GO:1990446
data:
  {"annotated_genes":["SJAG_02558","SJAG_04914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70207,113873],"is_not":false,"summary":null,"term":"GO:1990446"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear ribonucleoprotein particle.","definition_xrefs":["PMID:14713954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNP binding","termid":"GO:0070990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02558":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"U1 snRNP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990446","terms_by_termid":{"GO:1990446":null}}


id: PBO:0053639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 686","termid":"PBO:0053639"}


id: MONDO:0021355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of esophagus","secondary_identifiers":["NCIT:C3028","UMLS:C0014859","MEDGEN:4547","SCTID:126817006"],"synonyms":[{"name":"esophageal neoplasm","type":"exact"},{"name":"esophageal neoplasms, benign and malignant","type":"exact"},{"name":"esophageal tumor","type":"exact"},{"name":"esophageal tumors","type":"exact"},{"name":"esophageal tumour","type":"exact"},{"name":"esophageal tumours","type":"exact"},{"name":"esophagus neoplasm","type":"exact"},{"name":"esophagus neoplasm (disease)","type":"exact"},{"name":"esophagus tumor","type":"exact"},{"name":"neoplasm of esophagus","type":"exact"},{"name":"neoplasm of the esophagus","type":"exact"},{"name":"neoplasm of the oesophagus","type":"exact"},{"name":"oesophagus neoplasm","type":"exact"},{"name":"oesophagus neoplasm (disease)","type":"exact"},{"name":"oesophagus tumour","type":"exact"},{"name":"tumor of esophagus","type":"exact"},{"name":"tumor of the esophagus","type":"exact"},{"name":"tumour of oesophagus","type":"exact"},{"name":"tumour of the oesophagus","type":"exact"}],"termid":"MONDO:0021355","xrefs":{"Monarch":{"xref_id":"0021355"}}}


id: MONDO:0015863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyembryoma is a type oftumor that develops from the cells of the gonads (testes in men or ovaries in women). Such tumors are called germ cell tumors. Polyembryomas have a distinctivelook because they are composed of many parts that are shaped like embryos, one of the earliest stages of a developing human during pregnancy. Symptoms of a polyembryoma may include an unusual bump or mass in the abdomen which can cause pain in some individuals; puberty at an unusually young age (known as precocious puberty); or irregularities in a female's menstruation. Treatment begins with surgery and may be followed by chemotherapy and/or radiation therapy. The cause of polyembryoma is not yet known.","direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"polyembryoma","secondary_identifiers":["MEDGEN:83160","Orphanet:180229","NANDO:2200068","UMLS:C0334518","NCIT:C66776","GARD:9621"],"synonyms":[{"name":"gonadal polyembryoma","type":"related"}],"termid":"MONDO:0015863","xrefs":{"Monarch":{"xref_id":"0015863"}}}


id: PBO:0030898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulation_phenotype_during_vegetative_growth","termid":"PBO:0030898"}


id: PBO:0027939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0027939"}


id: GO:0016717
data:
  {"annotated_genes":["SJAG_03249","SJAG_01057","SJAG_03509","SJAG_00717","SJAG_05311","SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[75275,79042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[107546,89616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"},{"annotations":[72375,74081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042284"},{"annotations":[75079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water.","definition_xrefs":["EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01057":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03943":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016717","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0004768":null,"GO:0042284":null,"GO:0050046":null}}


id: GO:0098739
data:
  {"annotated_genes":["SJAG_03608","SJAG_05346","SJAG_03591","SJAG_03777","SJAG_00057","SJAG_01090","SJAG_04714","SJAG_03595","SJAG_02605","SJAG_02968","SJAG_02779","SJAG_02877","SJAG_03960","SJAG_00991","SJAG_03631","SJAG_02883","SJAG_04673","SJAG_04830","SJAG_01493","SJAG_04246","SJAG_01660","SJAG_04551","SJAG_02463","SJAG_03970","SJAG_04668","SJAG_01353","SJAG_05229","SJAG_00922","SJAG_04905","SJAG_04637","SJAG_01406","SJAG_00296","SJAG_02780","SJAG_04718","SJAG_05175","SJAG_01983","SJAG_04185","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[79242,71699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[66772,92368,74329,114458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[87894,114611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[117237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[92028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[71794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[110661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[92457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[95497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[112561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[100358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[100359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[101659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[101660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[95741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[72000,72827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[113380,91183],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[88044],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[88045],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[79928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[72353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[102149],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[110554,91709,93301,98876],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[98877,93302,91710],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93303],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[72229,70431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[101217,100352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[101661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[95743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"},{"annotations":[110136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[107998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[100679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[103015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[95510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"},{"annotations":[113233,104177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"import into 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across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"uptake","type":"broad"}],"termid":"GO:0098739","terms_by_termid":{"GO:0071578":null,"GO:0097638":null,"GO:0097639":null,"GO:0098702":null,"GO:0098703":null,"GO:0098705":null,"GO:0098708":null,"GO:0098709":null,"GO:0098710":null,"GO:0098714":null,"GO:0098715":null,"GO:0098716":null,"GO:0098717":null,"GO:0098720":null,"GO:0098721":null,"GO:0106081":null,"GO:0106082":null,"GO:0140125":null,"GO:0140206":null,"GO:0140207":null,"GO:0140270":null,"GO:0140425":null,"GO:1901583":null,"GO:1902434":null,"GO:1904679":null,"GO:1905135":null,"GO:1905136":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null}}


id: GO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = H2O + leukotriene A4.","definition_xrefs":["RHEA:32307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.34"],"synonyms":[{"name":"5-delta-lipoxygenase activity","type":"related"},{"name":"5-lipoxygenase activity","type":"related"},{"name":"5Delta-lipoxygenase activity","type":"related"},{"name":"C-5-lipoxygenase activity","type":"related"},{"name":"LTA synthase activity","type":"narrow"},{"name":"arachidonate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"arachidonic 5-lipoxygenase activity","type":"related"},{"name":"arachidonic acid 5-lipoxygenase activity","type":"related"},{"name":"delta(5)-lipoxygenase activity","type":"related"},{"name":"delta5-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"},{"name":"leukotriene-A(4) synthase activity","type":"narrow"},{"name":"leukotriene-A4 synthase activity","type":"related"}],"termid":"GO:0004051"}


id: PBO:0051611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 alpha","termid":"PBO:0051611"}


id: PBO:0087716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; involved in telomere maintenance; conserved with other metazoan MED31 subunits","termid":"PBO:0087716"}


id: RO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","termid":"RO:0002212"}


id: PBO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp9 (predicted)","termid":"PBO:0001999"}


id: GO:0061764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"},{"relation_name":"is_a","term_name":"late endosome to vacuole transport","termid":"GO:0045324"},{"relation_name":"is_a","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"late endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0061764"}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: PBO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C1","termid":"PBO:0060787"}


id: PBO:0076571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3L","termid":"PBO:0076571"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: PBO:0065140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase Y-linked (pseudogene)","termid":"PBO:0065140"}


id: MONDO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous impetigo is a contagious superficial infection occurring in intact skin. Prevalence in the general population is unknown. The disease is characterized by fragile vesicles and flaccid blisters, most often presenting as erosive lesions covered by a yellow crust. The face, trunk and extremities of children under 5 years of age (particularly neonates) are mainly affected. The disease is generally caused by group II Staphylococcus aureus.","definition_xrefs":["Orphanet:36237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bullous impetigo","secondary_identifiers":["SCTID:399183005","MEDGEN:507838","ICD10CM:L01.03","UMLS:C0021100","icd11.foundation:1398484288","GARD:18820","MedDRA:10006563"],"termid":"MONDO:0018182","xrefs":{"Monarch":{"xref_id":"0018182"}}}


id: PBO:0039332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, germ cell","termid":"PBO:0039332"}


id: GO:0009894
data:
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id: PBO:0110476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERRY endosomal RAB5 effector complex subunit 3","termid":"PBO:0110476"}


id: GO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine (position 9) = CoA + histone H2A N6-acetyl-L-lysine (position 9).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A acetyltransferase activity","termid":"GO:0043998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0016746","GO:0034212","GO:0003824","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H2AK9 acetyltransferase activity","synonyms":[{"name":"histone H2A-K9 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2A-K9 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2A-K9 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2A-K9 specific)","type":"exact"}],"termid":"GO:0044012"}


id: PBO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 4","termid":"PBO:0052636"}


id: PBO:0004106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec8","termid":"PBO:0004106"}


id: GO:0099192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse formed by a cerebellar Golgi cell synapsing on to a cerebellar granule cell.","definition_xrefs":["PMID:26134650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar Golgi cell to granule cell synapse","termid":"GO:0099192"}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: MONDO:0015847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vaginal malformation (obsolete MONDO:0015847)","secondary_identifiers":["Orphanet:180151"],"termid":"MONDO:0015847","xrefs":{"Monarch":{"xref_id":"0015847"}}}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: FYPO:0006033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:28481910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"normal protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"normal protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0006033"}


id: PBO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_vegetative_growth","termid":"PBO:0030881"}


id: GO:0016152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + Hg + NADP+ = Hg2+ + NADPH.","definition_xrefs":["RHEA:23856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mercury (II) reductase (NADP+) activity","secondary_identifiers":["UM-BBD_reactionID:r0406","EC:1.16.1.1","MetaCyc:MERCURY-II-REDUCTASE-RXN","KEGG_REACTION:R02807","GO:0018692"],"synonyms":[{"name":"Hg:NADP+ oxidoreductase activity","type":"related"},{"name":"mer A","type":"related"},{"name":"mercurate(II) reductase activity","type":"related"},{"name":"mercuric ion reductase activity","type":"related"},{"name":"mercuric reductase activity","type":"related"},{"name":"mercury reductase activity","type":"related"},{"name":"mercury(II) reductase activity","type":"related"},{"name":"reduced NADP:mercuric ion oxidoreductase activity","type":"related"}],"termid":"GO:0016152"}


id: PR:Q09744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.03c gene.","definition_xrefs":["UniProtKB:Q09744","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C12C2.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.03c","synonyms":[{"name":"Spom972h-SPBC12C2.03c","type":"exact"}],"termid":"PR:Q09744"}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: PBO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATPase_activity","termid":"PBO:0030638"}


id: PBO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D family exosome subunit Cti1","termid":"PBO:0034816"}


id: GO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+. Can also use malonate (3-oxopropanoate) as a substrate. The reaction occurs in two steps with the decarboxylation process preceding CoA-binding. Bicarbonate rather than CO2 is released as a final product.","definition_xrefs":["EC:1.2.1.27","PMID:2768248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity","secondary_identifiers":["Reactome:R-HSA-70893","MetaCyc:1.2.1.27-RXN"],"synonyms":[{"name":"MMSA dehydrogenase activity","type":"related"},{"name":"MSDH activity","type":"related"},{"name":"methylmalonate-semialdehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0004491"}


id: PBO:0058659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6787","termid":"PBO:0058659"}


id: MONDO:0970957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of extramedullary conus region spinal cord lipoma characterized by its location, extending from the poorly delineated tip of the conus.","definition_xrefs":["Orphanet:645288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramedullary conus spinal cord lipoma","termid":"MONDO:0968987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"terminal extramedullary conus spinal cord lipoma","secondary_identifiers":["MEDGEN:1853126","UMLS:C5816727"],"termid":"MONDO:0970957","xrefs":{"Monarch":{"xref_id":"0970957"}}}


id: GO:1900027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of ruffle assembly","synonyms":[{"name":"regulation of membrane ruffle formation","type":"exact"},{"name":"regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900027"}


id: GO:0071439
data:
  {"annotated_genes":["SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76847],"is_not":false,"summary":null,"term":"GO:0071439"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface.","definition_xrefs":["GOC:mah","PMID:16493411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"clathrin complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"clathrin triskelion","type":"exact"}],"termid":"GO:0071439","terms_by_termid":{"GO:0071439":null}}


id: MONDO:0016659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p23.1 duplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 8, with a highly variable phenotype, principally characterized by mild to moderate developmental delay, intellectual disability, mild facial dysmorphism (incl. prominent forehead, arched eyebrows, broad nasal bridge, upturned nares, cleft lip and/or palate) and congenital cardiac anomalies (e.g., atrioventricular septal defect). Other reported features include macrocephaly, behavioral abnormalities (e.g., attention deficit disorder), seizures, hypotonia and ocular and digital anomalies (poly/syndactyly).","definition_xrefs":["Orphanet:251076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 8","termid":"MONDO:0016945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p23.1 duplication syndrome","secondary_identifiers":["DECIPHER:85","GARD:10304","MEDGEN:1645138","SCTID:765140006","UMLS:C4707330"],"synonyms":[{"name":"dup(8)(p23.1p23.1)","type":"exact"},{"name":"trisomy 8p23.1","type":"exact"}],"termid":"MONDO:0016659","xrefs":{"Monarch":{"xref_id":"0016659"}}}


id: PBO:0066541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 6","termid":"PBO:0066541"}


id: PBO:0066243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1","termid":"PBO:0066243"}


id: PBO:0049706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 1","termid":"PBO:0049706"}


id: GO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-carboxy-3-hydroxypropanoyl-CoA = acetyl-CoA + glyoxylate.","definition_xrefs":["MetaCyc:MALYL-COA-LYASE-RXN","EC:4.1.3.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"malyl-CoA lyase activity","secondary_identifiers":["RHEA:16629"],"synonyms":[{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase activity","type":"related"},{"name":"malyl-coenzyme A lyase activity","type":"related"}],"termid":"GO:0050083"}


id: PR:P42656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.02c","synonyms":[{"name":"Spom972h-rad24","type":"exact"}],"termid":"PR:P42656"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["RO:0002204","GOREL:0001028"],"termid":"_global:gene_product_of"}


id: SO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby an exon is lost from the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_loss_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:exon_loss_variant","type":"exact"},{"name":"exon loss","type":"exact"},{"name":"snpEff:EXON_DELETED","type":"exact"}],"termid":"SO:0001572"}


id: GO:1990227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["GOC:pr","PMID:24011083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paranodal junction maintenance","synonyms":[{"name":"axoglial septate junction maintenance","type":"exact"},{"name":"paranodal axoglial junction maintenance","type":"exact"},{"name":"paranodal septate maintenance","type":"exact"}],"termid":"GO:1990227"}


id: MOD:01950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-isoglutamyl histamine.","definition_xrefs":["RESID:AA0596","PubMed:23022564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl histamine","synonyms":[{"name":"(2S)-2-amino-5-([2-(1H-imidazol-5-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"(gamma-glutamyl)histamine","type":"exact"},{"name":"L-isoglutamyl histamine","type":"exact"}],"termid":"MOD:01950"}


id: PBO:0113508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors; mutation can be complemented by human COA4","termid":"PBO:0113508"}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["EC:1.4.1.11","RHEA:19633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03349","MetaCyc:1.4.1.11-RXN"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: FYPO:0005358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal site-specific DNA replication termination at RTS1 barrier","termid":"FYPO:0005355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"increased site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"increased site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005358"}


id: GO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont vascular system (obsolete GO:0052494)","termid":"GO:0052494"}


id: PR:P41003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03456","PRO:DNx","PANTHER:PTHR18937:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.06c","secondary_identifiers":["UniProtKB:P41003"],"synonyms":[{"name":"Spom972h-SMC2","type":"exact"},{"name":"cell untimely torn protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromosome segregation protein cut14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41003"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_01190","SJAG_00976","SJAG_01077","SJAG_MIT13","SJAG_03337","SJAG_01355","SJAG_MIT20","SJAG_02504","SJAG_MIT04","SJAG_07007","SJAG_05629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73799,88153,89179,91920,108300,114247,115483,116845,119059,119081,119109],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163214","EC:7.1.1.9","MetaCyc:CYTOCHROME-C-OXIDASE-RXN"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["RHEA:25201","MetaCyc:R10-RXN","EC:4.1.2.43"],"termid":"GO:0043801"}


id: PBO:0034215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_evidence","termid":"PBO:0034215"}


id: MONDO:0020800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition in which there is degeneration of the myelin sheath that covers the nerves of the central nervous system.","definition_xrefs":["NCIT:C34526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease of central nervous system","secondary_identifiers":["ICD9:341.8","UMLS:C0011302","MEDGEN:3719","SCTID:6118003","ICD10CM:G35-G37","ICD9:341.9"],"synonyms":[{"name":"demyelinating CNS disease","type":"exact"},{"name":"demyelinating disease central nervous system (CNS)","type":"exact"},{"name":"demyelinating disease of central nervous system","type":"exact"},{"name":"demyelinating disorder of central nervous system","type":"exact"},{"name":"demyelinating disorders of the central nervous system","type":"exact"}],"termid":"MONDO:0020800","xrefs":{"Monarch":{"xref_id":"0020800"}}}


id: PBO:0116419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, fungi and plants","termid":"PBO:0116419"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: MONDO:0958000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies","secondary_identifiers":["UMLS:C5882734","OMIM:620654","MEDGEN:1846947"],"termid":"MONDO:0958000","xrefs":{"Monarch":{"xref_id":"0958000"}}}


id: PBO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family protein involved in TOR signalling (predicted)","termid":"PBO:0005298"}


id: PBO:0004528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Ker1","termid":"PBO:0004528"}


id: MONDO:1011602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in Chinese hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, Chinese hamster","secondary_identifiers":["OMIA:000284-10029"],"termid":"MONDO:1011602","xrefs":{"Monarch":{"xref_id":"1011602"}}}


id: GO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of blood pressure","type":"exact"},{"name":"master pacemaker clock regulation of blood pressure","type":"exact"}],"termid":"GO:0003054"}


id: PBO:0004570
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RRM3","termid":"PBO:0004570"}


id: GO:0072417
data:
  {"annotated_genes":["SJAG_01837","SJAG_04140","SJAG_00082","SJAG_03048","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111217,116704,102385,93775,89957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of spindle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in spindle checkpoint","type":"exact"},{"name":"spindle checkpoint effector process","type":"exact"}],"termid":"GO:0072417","terms_by_termid":{"GO:0140429":null}}


id: PBO:0049501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 8","termid":"PBO:0049501"}


id: GO:0044536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with a reduction in the quantity of fibrinogen found in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:21130897","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"},{"relation_name":"is_a","term_name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in depletion of circulating fibrinogen in another organism","synonyms":[{"name":"envenomation resulting in depletion of circulating fibrinogen in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of circulating fibrinogen in other organism","type":"exact"}],"termid":"GO:0044536"}


id: MONDO:0045003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the scrotum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrotal disorder","secondary_identifiers":["SCTID:49701002","UMLS:C0268919","MEDGEN:541586"],"synonyms":[{"name":"disease of scrotum","type":"exact"},{"name":"disease or disorder of scrotum","type":"exact"},{"name":"disorder of scrotum","type":"exact"},{"name":"scrotum disease","type":"exact"},{"name":"scrotum disease or disorder","type":"exact"}],"termid":"MONDO:0045003","xrefs":{"Monarch":{"xref_id":"0045003"}}}


id: GO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to steroid hormone","synonyms":[{"name":"response to steroid hormone stimulus","type":"exact"}],"termid":"GO:0048545"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","secondary_identifiers":["Reactome:R-HSA-156590"],"synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: PBO:0064695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 31","termid":"PBO:0064695"}


id: GO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + vanillin = 2 H+ + NADH + vanillate.","definition_xrefs":["EC:1.2.1.67","RHEA:13309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vanillin dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05699","MetaCyc:1.2.1.67-RXN"],"synonyms":[{"name":"vanillin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050608"}


id: PBO:0026825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026825"}


id: GO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction:(2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:17253090","PMID:8408023","PMID:12801917"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-3-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043889)","synonyms":[{"name":"(S)-3-O-geranylgeranylglycerylphosphate synthase activity","type":"exact"},{"name":"(S)-GGGP synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS","type":"exact"}],"termid":"GO:0043889"}


id: FYPO:0001945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein secretion","synonyms":[{"name":"normal protein secretion during mitotic cell cycle","type":"related"},{"name":"normal protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0001945"}


id: PBO:0066795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 94","termid":"PBO:0066795"}


id: PBO:0091053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm7","termid":"PBO:0091053"}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PMID:14730319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: PBO:0074953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-4","termid":"PBO:0074953"}


id: PBO:0073252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN4 antisense RNA 1","termid":"PBO:0073252"}


id: GO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of peptidoglycan recognition protein signaling pathway","termid":"GO:0061058"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"negative regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061060"}


id: PBO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031529"}


id: SO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by a nucleic acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bound_by_factor","termid":"SO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_nucleic_acid","synonyms":[{"name":"bound by nucleic acid","type":"exact"}],"termid":"SO:0000876"}


id: MONDO:0017847
data:
  {"annotated_genes":["SJAG_16456","SJAG_00797","SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012664"},{"annotations":[87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013354"},{"annotations":[86630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013776"}]},"cv_name":"mondo","definition":"Autosomal recessive form of spastic ataxia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01179":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spastic ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:316240","UMLS:C5679900","MEDGEN:1826141","GARD:21403"],"synonyms":[{"name":"AR-SPAX","type":"exact"},{"name":"spastic ataxia, autosomal recessive","type":"exact"}],"termid":"MONDO:0017847","terms_by_termid":{"MONDO:0012664":null,"MONDO:0013354":null,"MONDO:0013776":null},"xrefs":{"Monarch":{"xref_id":"0017847"}}}


id: MOD:00682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a hydroxylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated arginine","synonyms":[{"name":"HyArg","type":"exact"}],"termid":"MOD:00682"}


id: FYPO:0003806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on non-fermentable carbon source","termid":"FYPO:0003805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on non-fermentable carbon source","synonyms":[{"name":"abolished growth on non-fermentable carbon source","type":"broad"},{"name":"abolished non-fermentable carbon source utilization","type":"related"},{"name":"abolished vegetative cell population growth on non-fermentable carbon source","type":"exact"},{"name":"cell population growth on non-fermentable carbon source abolished","type":"exact"}],"termid":"FYPO:0003806"}


id: FYPO:0003045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC1R boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC1R","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC1R during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC1R during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC1R","type":"exact"}],"termid":"FYPO:0003045"}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: GO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"negatively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basophil differentiation","synonyms":[{"name":"down regulation of basophil differentiation","type":"exact"},{"name":"down-regulation of basophil differentiation","type":"exact"},{"name":"downregulation of basophil differentiation","type":"exact"},{"name":"inhibition of basophil differentiation","type":"narrow"}],"termid":"GO:0045641"}


id: FYECO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were subjected to nitrogen starvation for 14 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping starvation and timing","termid":"FYECO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14 days nitrogen starvation","termid":"FYECO:0000458"}


id: PBO:0081803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 732","termid":"PBO:0081803"}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: PR:O74990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04646","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.13","secondary_identifiers":["UniProtKB:O74990"],"synonyms":[{"name":"COG complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG4","type":"exact"},{"name":"component of oligomeric Golgi complex 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74990"}


id: PATO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mobility","termid":"PATO:0002283"}


id: PBO:0071652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 16","termid":"PBO:0071652"}


id: MONDO:0019129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of global developmental delay, osteopenia and skin anomalies.","definition_xrefs":["Orphanet:73223"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay-osteopenia-ectodermal defect syndrome","secondary_identifiers":["MEDGEN:929239","SCTID:717813005","UMLS:C4303570","GARD:18919"],"termid":"MONDO:0019129","xrefs":{"Monarch":{"xref_id":"0019129"}}}


id: GO:0051647
data:
  {"annotated_genes":["SJAG_04001","SJAG_02737","SJAG_03673","SJAG_00113","SJAG_04143","SJAG_03264","SJAG_01662","SJAG_02651","SJAG_01370","SJAG_04387","SJAG_02431","SJAG_04597","SJAG_00397","SJAG_04003","SJAG_02286","SJAG_02561","SJAG_05185","SJAG_01297","SJAG_00140","SJAG_00368","SJAG_00594","SJAG_03835","SJAG_02509","SJAG_02045","SJAG_01863","SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108279],"is_not":false,"summary":null,"term":"GO:0051647"},{"annotations":[91351,102968,103260,111064,91810,116968,100729,113964,90958,97566,87710,111418,95178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[106602,101436,111241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[104549,112785,104880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007097"},{"annotations":[101447,74874,107443,109624,70542,113966,116972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99234,97641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[76333,87714,99235,97568,91353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94384],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nucleus localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus localization","type":"exact"},{"name":"establishment and maintenance of nucleus localization","type":"exact"},{"name":"localization of nucleus","type":"exact"},{"name":"nucleus localisation","type":"exact"}],"termid":"GO:0051647","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0051647":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0079719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR5 divergent transcript","termid":"PBO:0079719"}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: MONDO:0016172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of sensory ganglionopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired sensory ganglionopathy (obsolete MONDO:0016172)","secondary_identifiers":["Orphanet:208984"],"synonyms":[{"name":"acquired sensory ganglionopathy","type":"exact"},{"name":"acquired sensory neuronopathy","type":"exact"}],"termid":"MONDO:0016172","xrefs":{"Monarch":{"xref_id":"0016172"}}}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: MONDO:0006504
data:
  {"annotated_genes":["SJAG_04881","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"An instance of metabolic disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired metabolic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060158","EFO:1000639"],"synonyms":[{"name":"acquired metabolic disease","type":"exact"}],"termid":"MONDO:0006504","terms_by_termid":{"MONDO:0010438":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0006504"}}}


id: MONDO:0015906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hypergonadotropic hypogonadism (obsolete MONDO:0015906)","secondary_identifiers":["Orphanet:181441"],"synonyms":[{"name":"rare disorder with primary hypogonadism","type":"exact"}],"termid":"MONDO:0015906","xrefs":{"Monarch":{"xref_id":"0015906"}}}


id: FYPO:0005595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular ceramide level","synonyms":[{"name":"normal cellular ceramide accumulation","type":"related"},{"name":"normal cellular ceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular ceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005595"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: MONDO:0022891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis Maroteaux Fonfria type","secondary_identifiers":["GARD:1598"],"termid":"MONDO:0022891","xrefs":{"Monarch":{"xref_id":"0022891"}}}


id: PBO:0027387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_stationary_phase","termid":"PBO:0027387"}


id: PR:Q9P7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk32 gene.","definition_xrefs":["UniProtKB:Q9P7X5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.10","synonyms":[{"name":"Spom972h-ppk32","type":"exact"}],"termid":"PR:Q9P7X5"}


id: GO:0034033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate biosynthetic process","termid":"GO:0033866"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside bisphosphate biosynthetic process","synonyms":[{"name":"purine nucleoside bisphosphate anabolism","type":"exact"},{"name":"purine nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside bisphosphate formation","type":"exact"},{"name":"purine nucleoside bisphosphate synthesis","type":"exact"}],"termid":"GO:0034033"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: GO:0032805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of receptor catabolic process","termid":"GO:2000646"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"activation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor degradation","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor catabolic process","type":"exact"}],"termid":"GO:0032805"}


id: FYPO:0001381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal protein kinase activity","termid":"FYPO:0001381"}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:29899453","PMID:7957097","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: SO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls downstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["NCBI:dm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_downstream_transcript_variant","synonyms":[{"name":"genic 3 prime transcript variant","type":"exact"},{"name":"genic 3' transcript variant","type":"exact"},{"name":"genic downstream transcript variant","type":"exact"}],"termid":"SO:0002152"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: MONDO:0008479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of skeletal dysplasia associated with short stature, developmental coxa vara, progressive hip deformity, simulated 'corner fractures' of long tubular bones and vertebral body abnormalities (mostly oval vertebral bodies).","definition_xrefs":["Orphanet:93315"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 2 collagen-related bone disorder (obsolete MONDO:0019686)","termid":"MONDO:0019686"},{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, 'corner fracture' type","secondary_identifiers":["DOID:0112297","MEDGEN:98146","UMLS:C0432221","GARD:4991","OMIM:184255","MESH:C535793","SCTID:254078005","icd11.foundation:1295452752"],"synonyms":[{"name":"SMDCF","type":"related"},{"name":"Sutcliffe SmD","type":"related"},{"name":"Sutcliffe type of spondylometaphyseal dysplasia","type":"related"},{"name":"spondylometaphyseal dysplasia Sutcliffe type","type":"related"},{"name":"spondylometaphyseal dysplasia corner fracture type","type":"related"},{"name":"spondylometaphyseal dysplasia, Sutcliffe type","type":"exact"},{"name":"spondylometaphyseal dysplasia, corner fracture type","type":"related"}],"termid":"MONDO:0008479","xrefs":{"Monarch":{"xref_id":"0008479"}}}


id: PBO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11 (predicted)","termid":"PBO:0002008"}


id: GO:0008682
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74026],"is_not":false,"summary":null,"term":"GO:0008682"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 6-methoxy-3-methyl-2-all-trans-polyprenyl-1,4-benzoquinol + donor-H2 + O2 = acceptor + a 3-demethylubiquinol + H2O.","definition_xrefs":["RHEA:50908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-demethoxyubiquinol 3-hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-18458","EC:1.14.99.60"],"synonyms":[{"name":"2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity","type":"narrow"},{"name":"demethoxy-ubiquinone hydroxylase","type":"related"},{"name":"demethoxyubiquinone monooxygenase","type":"related"}],"termid":"GO:0008682","terms_by_termid":{"GO:0008682":null}}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75416,103091],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00885","Reactome:R-HSA-446221","MetaCyc:2.7.7.13-RXN","EC:2.7.7.13"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: GO:0004527
data:
  {"annotated_genes":["SJAG_04824","SJAG_01431","SJAG_05373","SJAG_00841","SJAG_05280","SJAG_02540","SJAG_02908","SJAG_04006","SJAG_03132","SJAG_16455","SJAG_02658","SJAG_04084","SJAG_01832","SJAG_04767","SJAG_01798","SJAG_00966","SJAG_01173","SJAG_04587","SJAG_02818","SJAG_01822","SJAG_01836","SJAG_02298","SJAG_03994","SJAG_00377","SJAG_04519","SJAG_01648","SJAG_01163","SJAG_00401","SJAG_06586","SJAG_05197","SJAG_04407","SJAG_04153","SJAG_04171","SJAG_03734","SJAG_03876","SJAG_02275","SJAG_04369","SJAG_00081","SJAG_00814","SJAG_02993","SJAG_04818","SJAG_04410","SJAG_03276","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95370],"is_not":false,"summary":null,"term":"GO:0004527"},{"annotations":[71780,74975,104948,102831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008408"},{"annotations":[75045,75322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[66380,69664,79649,63189,118339,74513,103674,98941,104414,79359,70552,102094,105283,89937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[71206,88348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[78367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008409"},{"annotations":[69811,77818,73491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[76859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[88505,73044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[107773,97115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[114453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[67240,109970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[116631,74069,78933,77293,107799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[68345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[99621,101042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[74124,101147,88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[97117,72457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00377":null,"SJAG_00401":null,"SJAG_00814":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01431":null,"SJAG_01648":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01832":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02298":null,"SJAG_02540":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03994":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04171":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04767":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05197":null,"SJAG_05280":null,"SJAG_05373":null,"SJAG_06586":null,"SJAG_16455":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"exonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008857"],"synonyms":[{"name":"exonuclease IX activity","type":"narrow"}],"termid":"GO:0004527","terms_by_termid":{"GO:0000175":null,"GO:0004527":null,"GO:0004528":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008408":null,"GO:0008409":null,"GO:0008859":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null,"GO:1990838":null}}


id: GO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription factor import into nucleus (obsolete GO:0042990)","synonyms":[{"name":"regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042990"}


id: PR:O60098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14F5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.01","synonyms":[{"name":"Spom972h-SPBC14F5.01","type":"exact"}],"termid":"PR:O60098"}


id: PBO:0081814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 7, Y-linked","termid":"PBO:0081814"}


id: MONDO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the squamous epithelium of the exocervix.","definition_xrefs":["NCIT:C7453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"exocervical carcinoma","secondary_identifiers":["UMLS:C1299238","DOID:2892","SCTID:372100004","MEDGEN:226967"],"synonyms":[{"name":"carcinoma of ectocervix","type":"exact"},{"name":"carcinoma of exocervix","type":"exact"},{"name":"carcinoma of the exocervix","type":"exact"},{"name":"ectocervix carcinoma","type":"exact"},{"name":"exocervical cancer","type":"exact"},{"name":"exocervical carcinoma","type":"exact"},{"name":"exocervix carcinoma","type":"exact"}],"termid":"MONDO:0002455","xrefs":{"Monarch":{"xref_id":"0002455"}}}


id: FYPO:0003952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during oxidative stress response","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during cellular response to oxidative stress","type":"exact"},{"name":"delayed protein phosphorylation during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003952"}


id: PBO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 2","termid":"PBO:0060014"}


id: GO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of cytolysis of symbiont cells (obsolete GO:0051841)","synonyms":[{"name":"activation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"stimulation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"up regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"up-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"upregulation by host of cytolysis of symbiont cells","type":"exact"}],"termid":"GO:0051841"}


id: GO:1900673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving olefin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin metabolic process","synonyms":[{"name":"olefin metabolism","type":"exact"}],"termid":"GO:1900673"}


id: PBO:0062657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 7 (gene/pseudogene)","termid":"PBO:0062657"}


id: PBO:0043117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIAO2A pseudogene 2","termid":"PBO:0043117"}


id: GO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + mucus glycoprotein = CoA + O-palmitoylglycoprotein.","definition_xrefs":["MetaCyc:GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN","EC:2.3.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"glycoprotein O-fatty-acyltransferase activity","synonyms":[{"name":"fatty-acyl-CoA:mucus-glycoprotein fatty-acyltransferase activity","type":"related"},{"name":"protein acyltransferase activity","type":"related"}],"termid":"GO:0047965"}


id: PBO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 37","termid":"PBO:0071314"}


id: PBO:0058948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67","termid":"PBO:0058948"}


id: PBO:0055084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2502","termid":"PBO:0055084"}


id: PBO:0054309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1701","termid":"PBO:0054309"}


id: PBO:0040785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 2","termid":"PBO:0040785"}


id: PBO:0003450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA processing protein Esf1 (predicted)","termid":"PBO:0003450"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PBO:0087419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 8 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the intermembrane space; expression is regulated by Abf1p and Cpf1p","termid":"PBO:0087419"}


id: MONDO:0001933
data:
  {"annotated_genes":["SJAG_02012","SJAG_03266","SJAG_02426","SJAG_04495","SJAG_04334","SJAG_03247","SJAG_02013","SJAG_00092","SJAG_04206","SJAG_04394","SJAG_02000","SJAG_00214"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87304,87305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[86456,86455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[87228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[85106,85105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[86376,86375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[85104,87230,85100,85102,85103,85101,87231,87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A disease involving the endocrine pancreas.","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_03266":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"endocrine pancreas disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:17346000","MEDGEN:124407","DOID:1428","NCIT:C27067","ICD9:251","UMLS:C0271633"],"synonyms":[{"name":"disease of endocrine pancreas","type":"exact"},{"name":"disease or disorder of endocrine pancreas","type":"exact"},{"name":"disorder of endocrine pancreas","type":"exact"},{"name":"disorder of islets of langerhans","type":"related"},{"name":"disorder of pancreatic islets","type":"related"},{"name":"endocrine pancreas disease","type":"exact"},{"name":"endocrine pancreas disease or disorder","type":"exact"},{"name":"endocrine pancreas disorder","type":"exact"}],"termid":"MONDO:0001933","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0001933"}}}


id: GO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipid or protein within a plasma lipoprotein particle by oxidation of the lipid or one or more amino acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle oxidation","synonyms":[{"name":"plasma lipoprotein oxidation","type":"related"}],"termid":"GO:0034441"}


id: PBO:0083803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that associates with contractile actomyosin ring; required for ingression of the plasma membrane into the bud neck during cytokinesis; C2 domain, a membrane targeting module, is required for function; activates chitin synthase activity of Chs2p during cytokinesis","termid":"PBO:0083803"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: PBO:0077876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 3","termid":"PBO:0077876"}


id: PBO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 2","termid":"PBO:0042442"}


id: GO:0071132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaX-beta2 integrin complex bound to intercellular adhesion molecule 4.","definition_xrefs":["PMID:16985175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphaX-beta2 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAX-ITGB2-ICAM4 complex","type":"narrow"}],"termid":"GO:0071132"}


id: PBO:0069098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 345, pseudogene","termid":"PBO:0069098"}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: GO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ozone","termid":"GO:0010193"}


id: PBO:0064048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 82","termid":"PBO:0064048"}


id: GO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + CoA + ATP = 4-chlorobenzoyl-CoA + AMP + diphosphate. This reaction requires magnesium and is part of the bacterial 2,4-dichlorobenzoate degradation pathway.","definition_xrefs":["EC:6.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"4-chlorobenzoate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R03932","MetaCyc:6.2.1.33-RXN","RHEA:23220","UM-BBD_reactionID:r0139"],"synonyms":[{"name":"4-chlorobenzoate:CoA ligase activity","type":"exact"}],"termid":"GO:0018861"}


id: PBO:0062591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 1","termid":"PBO:0062591"}


id: PR:Q9Y705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.15","synonyms":[{"name":"Spom972h-alp4","type":"exact"},{"name":"altered polarity protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y705"}


id: PBO:0043692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5A pseudogene 1","termid":"PBO:0043692"}


id: PBO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 1 homolog","termid":"PBO:0070429"}


id: PBO:0076019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 16","termid":"PBO:0076019"}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075133)","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: PBO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 1","termid":"PBO:0060823"}


id: PBO:0026895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026895"}


id: GO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5L2 anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C5a anaphylatoxin chemotactic receptor binding","termid":"GO:0031714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C5L2 anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5L2 anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031715"}


id: PBO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc4","termid":"PBO:0001970"}


id: MONDO:0011413
data:
  {"annotated_genes":["SJAG_02919","SJAG_04567","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85352,85353,85354],"is_not":false,"summary":null,"term":"MONDO:0011413"}]},"cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the CRYAA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"},{"relation_name":"excluded_subClassOf","term_name":"cataract - microcornea syndrome","termid":"MONDO:0015300"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 9 multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15364","UMLS:C1858679","OMIM:604219","DOID:0110266","MEDGEN:347693"],"synonyms":[{"name":"CATC1","type":"narrow"},{"name":"CRYAA cataract (disease)","type":"exact"},{"name":"CTRCT9","type":"exact"},{"name":"autosomal recessive congenital cataract 1","type":"narrow"},{"name":"cataract (disease) caused by mutation in CRYAA","type":"exact"},{"name":"cataract 9 multiple types with or without microcornea","type":"exact"},{"name":"cataract 9, multiple types","type":"related"},{"name":"cataract 9, multiple types, with or without microcornea","type":"related"},{"name":"cataract, autosomal dominant","type":"related"},{"name":"cataract, autosomal recessive congenital 1","type":"related"}],"termid":"MONDO:0011413","terms_by_termid":{"MONDO:0011413":null},"xrefs":{"Monarch":{"xref_id":"0011413"}}}


id: PBO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatoma","termid":"PBO:0001500"}


id: PBO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 2","termid":"PBO:0050027"}


id: GO:0061660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Atg12 to a substrate protein via the reaction X-Atg12 + S = X + S-Atg12, where X is either an E2 or E3 enzyme, the X-Atg12 linkage is a thioester bond, and the S-Atg12 linkage is an isopeptide bond between the C-terminal amino acid of Atg12 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0019787","GO:0016746","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"Atg12 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061660"}


id: PBO:0086699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; YCR101C is not an essential gene","termid":"PBO:0086699"}


id: PR:Q9UT21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A developmentally-regulated GTP-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00593","PANTHER:PTHR11702:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C9.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.07c","secondary_identifiers":["UniProtKB:Q9UT21"],"synonyms":[{"name":"Spom972h-DRG1","type":"exact"}],"termid":"PR:Q9UT21"}


id: MONDO:0009073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the WASHC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 1","secondary_identifiers":["DOID:0060571","UMLS:C4551776","OMIM:220210","GARD:15160","MEDGEN:1634646"],"synonyms":[{"name":"3C syndrome","type":"related"},{"name":"Craniocerebellocardiac dysplasia","type":"related"},{"name":"Dandy-Walker-like malformation with atrioventricular septal defect","type":"related"},{"name":"RTSC","type":"related"},{"name":"RTSC1","type":"related"},{"name":"Ritscher-Schinzel syndrome","type":"related"},{"name":"Ritscher-Schinzel syndrome 1","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in WASHC5","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 1","type":"exact"},{"name":"WASHC5 Ritscher-Schinzel syndrome","type":"exact"}],"termid":"MONDO:0009073","xrefs":{"Monarch":{"xref_id":"0009073"}}}


id: GO:1903790
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63702],"is_not":false,"summary":null,"term":"GO:1903790"}]},"cv_name":"biological_process","definition":"The process in which a guanyl nucleotide is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","GOC:dph","PMID:25320081","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transport","termid":"GO:0001408"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"guanine nucleotide transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"guanyl nucleotide transmembrane transport","type":"exact"}],"termid":"GO:1903790","terms_by_termid":{"GO:1903790":null}}


id: GO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3A, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Mad-Max-mSin3A complex","termid":"GO:0070439"}


id: PR:P07334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdr1 gene.","definition_xrefs":["UniProtKB:P07334","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.06c","synonyms":[{"name":"Spom972h-cdr1","type":"exact"},{"name":"protein kinase nim1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P07334"}


id: GO:0075512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.","definition_xrefs":["GOC:jl","GOC:bf","VZ:957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis of virus by host cell","termid":"GO:0019065"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"clathrin-dependent endocytosis of virus by host cell","secondary_identifiers":["GO:0075516"],"synonyms":[{"name":"clathrin-mediated endocytosis of virus by host cell","type":"exact"},{"name":"viral entry into host cell via clathrin-mediated endocytosis","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome lysis","type":"narrow"},{"name":"viral penetration via clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:0075512"}


id: PBO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine, mitochondrial","termid":"PBO:0005883"}


id: MOD:02070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}


id: PATO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000783 digestive function value (obsolete PATO:0000783)","termid":"PATO:0000783"}


id: PBO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 7","termid":"PBO:0071643"}


id: PBO:0079766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFL1 antisense RNA 1","termid":"PBO:0079766"}


id: PBO:0049114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR176 divergent transcript","termid":"PBO:0049114"}


id: GO:0102746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + tetrahydrogeranylgeranyl-PP + NADPH = (E)-3,7,11,15-tetramethylhexadec-2-en-1-yl diphosphate + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrogeranylgeranyl-PP reductase activity (obsolete GO:0102746)","termid":"GO:0102746"}


id: PBO:0029371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029371"}


id: GO:0008041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein of fat body (sensu Insecta) (obsolete GO:0008041)","synonyms":[{"name":"storage protein of fat body (sensu Insecta)","type":"exact"}],"termid":"GO:0008041"}


id: MONDO:0020345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete presynaptic congenital myasthenic syndrome (obsolete MONDO:0020345)","secondary_identifiers":["Orphanet:98914"],"synonyms":[{"name":"presynaptic congenital myasthenic syndromes","type":"related"}],"termid":"MONDO:0020345","xrefs":{"Monarch":{"xref_id":"0020345"}}}


id: GO:1901383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"},{"relation_name":"negatively_regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chorionic trophoblast cell proliferation","synonyms":[{"name":"down regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"down-regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"downregulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"inhibition of chorionic trophoblast cell proliferation","type":"narrow"}],"termid":"GO:1901383"}


id: GO:0010401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactan, a polymer of D-galactosyl units that can be found as a side chain of the pectin rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"pectic galactan metabolic process","synonyms":[{"name":"pectic galactan metabolism","type":"exact"}],"termid":"GO:0010401"}


id: PBO:0063561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELO antisense RNA 1","termid":"PBO:0063561"}


id: PBO:0064461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 2, accessory subunit","termid":"PBO:0064461"}


id: PBO:0027268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027268"}


id: PBO:0063730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 3","termid":"PBO:0063730"}


id: PBO:0012549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens Rab6","termid":"PBO:0012549"}


id: PBO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 7","termid":"PBO:0080172"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: GO:0000170
data:
  {"annotated_genes":["SJAG_04913","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72376,91777],"is_not":false,"summary":null,"term":"GO:0000170"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of sphingolipid long chain bases.","definition_xrefs":["PMID:9556590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingosine hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428260"],"termid":"GO:0000170","terms_by_termid":{"GO:0000170":null}}


id: MOD:00619
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because entry 300 is redundant with Unimod 6 remap to MOD:01328","definition_xrefs":["Unimod:300"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00619 hydroxylethanone (obsolete MOD:00619)","termid":"MOD:00619"}


id: MONDO:0024415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"duodenitis","termid":"MONDO:0004627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hemorrhagic duodenitis","secondary_identifiers":["ICD9:535.61","MEDGEN:137951","SCTID:95531001","UMLS:C0341245"],"synonyms":[{"name":"erosive duodenitis","type":"related"},{"name":"hemorrhagic duodenitis","type":"exact"},{"name":"multiple duodenal erosions","type":"related"}],"termid":"MONDO:0024415","xrefs":{"Monarch":{"xref_id":"0024415"}}}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: MONDO:0850014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin-reversed arterial perfusion sequence","secondary_identifiers":["Orphanet:617297","UMLS:C5575500","GARD:22446","MEDGEN:1842726"],"termid":"MONDO:0850014","xrefs":{"Monarch":{"xref_id":"0850014"}}}


id: GO:0038191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuropilin family.","definition_xrefs":["PMID:23871893","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuropilin binding","synonyms":[{"name":"Nrp binding","type":"exact"},{"name":"Nrp ligand","type":"narrow"},{"name":"neuropilin-binding","type":"exact"}],"termid":"GO:0038191"}


id: MONDO:1011888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hydranencephaly and cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:001689"],"termid":"MONDO:1011888","xrefs":{"Monarch":{"xref_id":"1011888"}}}


id: PBO:0028198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_beta-glucanase","termid":"PBO:0028198"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


