# terms

id: FYPO:0007082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle elongation in meiosis II","synonyms":[{"name":"normal meiotic spindle elongation in meiosis II","type":"exact"},{"name":"normal meiotic spindle elongation in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007082"}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: MONDO:0100304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of bile acid aminotransferase.","definition_xrefs":["MONDO:patterns/inborn_metabolic_disrupts"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of bile acid aminotransferase","synonyms":[{"name":"disorder of bile acid aminotransferase","type":"exact"}],"termid":"MONDO:0100304","xrefs":{"Monarch":{"xref_id":"0100304"}}}


id: PBO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 3, pseudogene","termid":"PBO:0051841"}


id: MONDO:0014393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary lymphedema in which the cause of the disease is a mutation in the VEGFC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 4","secondary_identifiers":["OMIM:615907","MEDGEN:1651756","UMLS:C4747769","GARD:16468","DOID:0070209"],"synonyms":[{"name":"LMPH1D","type":"related"},{"name":"VEGFC hereditary lymphedema","type":"exact"},{"name":"hereditary lymphedema caused by mutation in VEGFC","type":"exact"},{"name":"lymphedema, hereditary, 1D","type":"exact"},{"name":"lymphedema, hereditary, type 1D","type":"exact"}],"termid":"MONDO:0014393","xrefs":{"Monarch":{"xref_id":"0014393"}}}


id: PBO:0038386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-epiphyte_of","termid":"PBO:0038386"}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: PBO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Calcofluor_White","termid":"PBO:0030617"}


id: FYPO:0007846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during anaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"short meiotic spindle during anaphase I","synonyms":[{"name":"short meiosis I spindle during anaphase","type":"exact"},{"name":"short spindle during anaphase of meiosis I","type":"exact"},{"name":"short spindle during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0007846"}


id: PBO:0080863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 4","termid":"PBO:0080863"}


id: PBO:0061690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 205","termid":"PBO:0061690"}


id: MONDO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A malignant neoplasm involving the connective tissue","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","secondary_identifiers":["SCTID:126598008","DOID:201","MESH:D009372"],"synonyms":[{"name":"cancer of connective tissue","type":"exact"},{"name":"connective tissue cancer","type":"exact"},{"name":"connective tissue neoplasm","type":"broad"},{"name":"malignant connective tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"broad"}],"termid":"MONDO:0002176","xrefs":{"Monarch":{"xref_id":"0002176"}}}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: GO:2000377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reactive oxygen species metabolic process","synonyms":[{"name":"regulation of ROS metabolic process","type":"exact"},{"name":"regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000377"}


id: MONDO:1010420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, horse","secondary_identifiers":["OMIA:000703-9796"],"termid":"MONDO:1010420","xrefs":{"Monarch":{"xref_id":"1010420"}}}


id: PATO:0010001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected","termid":"PATO:0010001"}


id: GO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the androecium over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"androecium development","termid":"GO:0048466"}


id: PR:G2TRM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.18 gene.","definition_xrefs":["UniProtKB:G2TRM1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein C977.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.18","synonyms":[{"name":"Spom972h-SPAC977.18","type":"exact"}],"termid":"PR:G2TRM1"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["RESID:AA0548","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: PBO:0040522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 2","termid":"PBO:0040522"}


id: GO:0019629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate catabolic process","termid":"GO:0019543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"propionate catabolic process, 2-methylcitrate cycle","synonyms":[{"name":"propionate breakdown, 2-methylcitrate cycle","type":"exact"},{"name":"propionate degradation, 2-methylcitrate cycle","type":"exact"}],"termid":"GO:0019629"}


id: MONDO:1010553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus that occurs in white rhinoceros.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent urachus, non-human animal","termid":"MONDO:1010046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus, white rhinoceros","secondary_identifiers":["OMIA:000781-9807"],"termid":"MONDO:1010553","xrefs":{"Monarch":{"xref_id":"1010553"}}}


id: GO:0160044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(in) + sulfate(out) = chloride(out) + sulfate(in).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfate:chloride antiporter activity","termid":"GO:0160044"}


id: PBO:0046484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC6L2 antisense RNA 1","termid":"PBO:0046484"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["UniProtKB:Q10247","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0031410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_vegetative_cell","termid":"PBO:0031410"}


id: GO:1990852
data:
  {"annotated_genes":["SJAG_05266","SJAG_01224","SJAG_05319","SJAG_01775","SJAG_02731","SJAG_05220","SJAG_01371","SJAG_01211","SJAG_00918","SJAG_01546","SJAG_03437"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98623,89097,89702,96759,109907,114117,107519,90946,100522,116942,108902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule to the spindle pole body, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to spindle pole body","termid":"GO:0071989"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990852","terms_by_termid":{"GO:1990976":null}}


id: MONDO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Cucumis melo plant fruit food product.","definition_xrefs":["DOID:0060509"],"gene_count":0,"genotype_count":0,"name":"obsolete melon allergy (obsolete MONDO:0000784)","synonyms":[{"name":"Cucumis melo fruit allergy","type":"exact"}],"termid":"MONDO:0000784","xrefs":{"Monarch":{"xref_id":"0000784"}}}


id: PR:Q10148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tls1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.01","synonyms":[{"name":"Spom972h-tls1","type":"exact"}],"termid":"PR:Q10148"}


id: PBO:0079392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4A class IVa pseudogene 1","termid":"PBO:0079392"}


id: PBO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 5","termid":"PBO:0043212"}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: PBO:0055868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat protein 1","termid":"PBO:0055868"}


id: PBO:0046098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 1","termid":"PBO:0046098"}


id: PBO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 1","termid":"PBO:0046070"}


id: PBO:0083078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl-peptidase III; cleaves dipeptides from the amino terminus of target proteins; highly active on synthetic substrate Arg-Arg-2-naphthylamide; mammalian ortholog may be a biomarker for some cancers","termid":"PBO:0083078"}


id: MONDO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002515","MONDO:0019142","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 2","secondary_identifiers":["MEDGEN:1645733","OMIM:618015","UMLS:C4693947"],"synonyms":[{"name":"EPP2","type":"related"},{"name":"protoporphyria, erythropoietic, 2","type":"exact"}],"termid":"MONDO:0060729","xrefs":{"Monarch":{"xref_id":"0060729"}}}


id: GO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + quinaldate = AH(2) + kynurenate.","definition_xrefs":["EC:1.3.99.18","RHEA:16697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"quinaldate 4-oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R03687","MetaCyc:1.3.99.18-RXN"],"synonyms":[{"name":"quinaldic acid 4-oxidoreductase activity","type":"related"},{"name":"quinoline-2-carboxylate:acceptor 4-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0047122"}


id: FYPO:0001942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population in a culture remains in lag phase longer than normal. The onset of exponential growth is thus delayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased duration of lag phase","synonyms":[{"name":"delayed exponential growth","type":"exact"},{"name":"prolonged lag phase","type":"exact"}],"termid":"FYPO:0001942"}


id: PBO:0039354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 4","termid":"PBO:0039354"}


id: MOD:01472
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either adds neutral hydrogen atoms (proton and electron), or removes oxygen atoms from a residue with or without the addition of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced residue","synonyms":[{"name":"RedRes","type":"exact"}],"termid":"MOD:01472"}


id: FYPO:0000836
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119326,119325,119324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: increased","type":"related"}],"termid":"FYPO:0000836","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0034260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulated_by","termid":"PBO:0034260"}


id: PBO:0057503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 621","termid":"PBO:0057503"}


id: MOD:01392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue, and C-4 methylates to form L-asparagine 5-methylthiazole-4-carboxylic acid.","definition_xrefs":["PubMed:10625477","PubMed:1880060","PubMed:7844053","RESID:AA0469"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"C-methylated residue","termid":"MOD:00656"},{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-bisazanyl-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methylthiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01392"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: PBO:0077245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5B (pseudogene)","termid":"PBO:0077245"}


id: GO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"pericyte cell differentiation","termid":"GO:1904238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell differentiation","termid":"GO:0072007"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: PBO:0068662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 43, pseudogene","termid":"PBO:0068662"}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling pathway (obsolete GO:0120027)","termid":"GO:0120027"}


id: MONDO:0100134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency","termid":"MONDO:0100133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex I deficiency, mitochondrial type","termid":"MONDO:0100134","xrefs":{"Monarch":{"xref_id":"0100134"}}}


id: PR:O60071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- enp1 gene.","definition_xrefs":["UniProtKB:O60071","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.09","synonyms":[{"name":"Spom972h-enp1","type":"exact"}],"termid":"PR:O60071"}


id: PBO:0054521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1921","termid":"PBO:0054521"}


id: PBO:0081802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 731, pseudogene","termid":"PBO:0081802"}


id: GO:0005342
data:
  {"annotated_genes":["SJAG_04905","SJAG_02140","SJAG_00543","SJAG_02779","SJAG_04706","SJAG_00522","SJAG_00232","SJAG_05175","SJAG_03503","SJAG_04295","SJAG_01406","SJAG_01872","SJAG_01960","SJAG_00626","SJAG_01505","SJAG_03256","SJAG_02029","SJAG_04593","SJAG_05325","SJAG_01924","SJAG_02780","SJAG_00276","SJAG_00275","SJAG_03644","SJAG_03899","SJAG_04718","SJAG_00671","SJAG_04725","SJAG_03400","SJAG_04984","SJAG_04637","SJAG_04588"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[96543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[71698,79241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[79850,87414,70929,79787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046943"},{"annotations":[72406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[75238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71697,79240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[73772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[92460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[69791,77698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[88369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[96000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[97346,79073,100360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[102805,110044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[96544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[96545,98221,79068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[97347,79066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[110045,102806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[100361,110046,79070,97348,102807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[107922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[100353,101218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[90581,79071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[79067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[67328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[101664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[88370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[72352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[76539,93313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[94365,76897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[101666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[112282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic acids from one side of a membrane to the other. Organic acids are acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"organic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005342","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: GO:2000411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell migration","termid":"GO:2000405"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"negatively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte migration","synonyms":[{"name":"negative regulation of immature T cell migration","type":"related"},{"name":"negative regulation of immature T lymphocyte migration","type":"related"},{"name":"negative regulation of immature T-cell migration","type":"related"},{"name":"negative regulation of immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000411"}


id: SOFP:ontology_term
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A term from some ontology classifying the feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ontology_term","termid":"SOFP:ontology_term"}


id: GO:0042937
data:
  {"annotated_genes":["SJAG_01983","SJAG_03577","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71791],"is_not":false,"summary":null,"term":"GO:0042937"},{"annotations":[95499,113154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a tripeptide, a compound containing three amino acids linked together by peptide bonds, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tripeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide transporter activity","type":"related"}],"termid":"GO:0042937","terms_by_termid":{"GO:0034634":null,"GO:0042937":null}}


id: PBO:0076154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 2","termid":"PBO:0076154"}


id: PBO:0038540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD14A-ACY1 readthrough","termid":"PBO:0038540"}


id: PBO:0049019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1","termid":"PBO:0049019"}


id: GO:1901848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinate.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00830","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"nicotinate catabolic process","synonyms":[{"name":"nicotinate breakdown","type":"exact"},{"name":"nicotinate catabolism","type":"exact"},{"name":"nicotinate degradation","type":"exact"}],"termid":"GO:1901848"}


id: PBO:0084128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexokinase expressed during growth with low glucose levels; induced on non-fermentable carbon sources; required for transcriptional induction of the early meiotic-specific transcription factor IME1; required for sporulation; expression regulated by glucose-repression transcription factors Mig1/2p; protein abundance increases in response to DNA replication stress; EMI2 has a paralog, GLK1, that arose from the whole genome duplication","termid":"PBO:0084128"}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: PBO:0081776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705D","termid":"PBO:0081776"}


id: MONDO:0016334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","secondary_identifiers":["Orphanet:217610"],"termid":"MONDO:0016334","xrefs":{"Monarch":{"xref_id":"0016334"}}}


id: MONDO:0005545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process in which the bacteria Staphylococcus aureus is present.","definition_xrefs":["NCIT:C122576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcus aureus infection","secondary_identifiers":["EFO:0005681","MEDGEN:232934","SCTID:406602003","UMLS:C1318973"],"termid":"MONDO:0005545","xrefs":{"Monarch":{"xref_id":"0005545"}}}


id: GO:0140270
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92457],"is_not":false,"summary":null,"term":"GO:0140270"}]},"cv_name":"biological_process","definition":"The directed movement of gluconate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate transmembrane transport","termid":"GO:0035429"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gluconate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140270","terms_by_termid":{"GO:0140270":null}}


id: PBO:0054477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1877","termid":"PBO:0054477"}


id: PBO:0054217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1597","termid":"PBO:0054217"}


id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: GO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism (obsolete GO:0044215)","termid":"GO:0044215"}


id: PBO:0055684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member N","termid":"PBO:0055684"}


id: MONDO:0044913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the eye from another anatomic site.","definition_xrefs":["NCIT:C4586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the eye","secondary_identifiers":["MEDGEN:91115","UMLS:C0347019","SCTID:94292003"],"synonyms":[{"name":"Metastases to eye","type":"exact"},{"name":"Metastases to the eye","type":"exact"},{"name":"Metastatic malignant neoplasm in the eye","type":"exact"},{"name":"Metastatic malignant neoplasm to the eye","type":"exact"},{"name":"Metastatic neoplasm to the eye","type":"exact"},{"name":"Metastatic tumor to the eye","type":"exact"},{"name":"Metastatic tumour to the eye","type":"exact"},{"name":"eye metastasis","type":"exact"},{"name":"metastasis to eye","type":"exact"},{"name":"metastasis to the eye","type":"exact"}],"termid":"MONDO:0044913","xrefs":{"Monarch":{"xref_id":"0044913"}}}


id: GO:0046587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"positively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"activation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"stimulation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"up regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"up-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"upregulation of calcium-dependent cell-cell adhesion","type":"exact"}],"termid":"GO:0046587"}


id: PBO:0052980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LACTB2 antisense RNA 1","termid":"PBO:0052980"}


id: PR:P40385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.12","synonyms":[{"name":"Spom972h-rec6","type":"exact"}],"termid":"PR:P40385"}


id: GO:1901346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of vasculature development that is involved in developing an avascular cornea of a camera-type eye.","definition_xrefs":["PMID:16849433","PMID:17051153","GOC:uh","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"part_of","term_name":"avascular cornea development in camera-type eye","termid":"GO:0036331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasculature development involved in avascular cornea development in camera-type eye","synonyms":[{"name":"down regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"down-regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down-regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down-regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down-regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"downregulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"downregulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"downregulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"downregulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"inhibition of vascular system development involved in avascular cornea development","type":"related"},{"name":"inhibition of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"inhibition of vasculature development involved in avascular cornea development","type":"narrow"},{"name":"inhibition of vasculature development involved in avascular cornea development in camera-type eye","type":"narrow"},{"name":"negative regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"negative regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"negative regulation of vasculature development involved in avascular cornea development","type":"exact"}],"termid":"GO:1901346"}


id: PBO:0078263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-1","termid":"PBO:0078263"}


id: PBO:0060435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 2","termid":"PBO:0060435"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["RHEA:54084","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["EC:2.6.1.97","Wikipedia:Archaeosine_synthase"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: GO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the vein. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The vein is a vessel carrying blood away from the capillary beds.","definition_xrefs":["GOC:mtg_muscle","MA:0000715","MSH:D014680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vein smooth muscle contraction","termid":"GO:0014826"}


id: GO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The whole of the genetic information of a virus, contained as either DNA or RNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete viral genome (obsolete GO:0019015)","termid":"GO:0019015"}


id: GO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kappa-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kappa-type opioid receptor binding","synonyms":[{"name":"dynorphin receptor binding","type":"related"},{"name":"kappa-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031851"}


id: FYPO:0001760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell separation after cytokinesis","synonyms":[{"name":"normal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"normal cell separation after cytokinesis following mitosis","type":"exact"},{"name":"normal mitotic cytokinetic cell separation","type":"exact"},{"name":"normal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0001760"}


id: MONDO:0006480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated pleomorphic sarcoma characterized by the presence of numerous inflammatory cells.","definition_xrefs":["NCIT:C6497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated pleomorphic sarcoma","termid":"MONDO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated pleomorphic sarcoma, inflammatory variant","secondary_identifiers":["DOID:6192","MEDGEN:235211","UMLS:C1334180","EFO:1000608"],"synonyms":[{"name":"Xanthosarcoma","type":"exact"},{"name":"inflammatory MFH","type":"exact"},{"name":"inflammatory malignant fibrous histiocytoma","type":"exact"},{"name":"malignant xanthogranuloma","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma, inflammatory variant","type":"exact"}],"termid":"MONDO:0006480","xrefs":{"Monarch":{"xref_id":"0006480"}}}


id: GO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with an apolipoprotein E receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor binding (obsolete GO:0050749)","synonyms":[{"name":"apolipoprotein E receptor binding","type":"exact"}],"termid":"GO:0050749"}


id: GO:1900539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fumonisin metabolic process","synonyms":[{"name":"fumonisin metabolism","type":"related"}],"termid":"GO:1900539"}


id: GO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) (obsolete GO:0000275)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275"}


id: PBO:0069707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 987, pseudogene","termid":"PBO:0069707"}


id: PBO:0017466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genomically_related_to","termid":"PBO:0017466"}


id: MONDO:0011288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, optic atrophy, microcephaly, and 10Y sex reversal","secondary_identifiers":["MESH:C566409","OMIM:603117","UMLS:C1864185","MEDGEN:351065"],"synonyms":[{"name":"spastic paraplegia, optic atrophy, microcephaly, and XY SEX reversal","type":"related"}],"termid":"MONDO:0011288","xrefs":{"Monarch":{"xref_id":"0011288"}}}


id: MONDO:0013998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Carpenter syndrome in which the cause of the disease is a mutation in the MEGF8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carpenter syndrome","termid":"MONDO:0019012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"MEGF8-related Carpenter syndrome","secondary_identifiers":["GARD:15889","OMIM:614976","MEDGEN:767161","UMLS:C3554247"],"synonyms":[{"name":"CARPENTER syndrome 2","type":"related"},{"name":"CRPT2","type":"related"},{"name":"Carpenter syndrome 2","type":"exact"},{"name":"Carpenter syndrome caused by mutation in MEGF8","type":"exact"},{"name":"Carpenter syndrome type 2","type":"exact"},{"name":"MEGF8 Carpenter syndrome","type":"exact"}],"termid":"MONDO:0013998","xrefs":{"Monarch":{"xref_id":"0013998"}}}


id: PBO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 12","termid":"PBO:0050388"}


id: PBO:0089161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex","termid":"PBO:0089161"}


id: GO:0019854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0005975","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"L-ascorbic acid catabolic process","secondary_identifiers":["MetaCyc:PWY0-301"],"synonyms":[{"name":"L-ascorbic acid breakdown","type":"exact"},{"name":"L-ascorbic acid catabolism","type":"exact"},{"name":"L-ascorbic acid degradation","type":"exact"},{"name":"ascorbate catabolic process","type":"exact"},{"name":"ascorbate catabolism","type":"exact"},{"name":"vitamin C catabolic process","type":"exact"},{"name":"vitamin C catabolism","type":"exact"}],"termid":"GO:0019854"}


id: GO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on fibronectin in the extracellular matrix.","definition_xrefs":["PMID:20856819","CL:0000893","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-dependent thymocyte migration","termid":"GO:0072680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin-dependent thymocyte migration","synonyms":[{"name":"fibronectin-dependent immature T cell migration","type":"related"},{"name":"fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"fibronectin-dependent immature T-cell migration","type":"related"},{"name":"fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072681"}


id: PBO:0059198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X5, pseudogene","termid":"PBO:0059198"}


id: PBO:0029329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_modification","termid":"PBO:0029329"}


id: GO:0072665
data:
  {"annotated_genes":["SJAG_01981","SJAG_03385","SJAG_01242","SJAG_02117","SJAG_03976","SJAG_01281","SJAG_00204","SJAG_04912","SJAG_16459","SJAG_03970","SJAG_01367","SJAG_00380","SJAG_04489","SJAG_00821","SJAG_04349","SJAG_01088","SJAG_03250","SJAG_03892","SJAG_05210","SJAG_00108","SJAG_00416","SJAG_00208","SJAG_02584","SJAG_04552","SJAG_01488","SJAG_01229","SJAG_05303","SJAG_03783","SJAG_01360","SJAG_00181","SJAG_01527","SJAG_02912","SJAG_03756","SJAG_04936","SJAG_01586","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87964,113328,114470,105772,88077,91468,91603,88042,91032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[90968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[77176,73953,78012,80236,72694,71095,77132,77570,75548,96529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[78394,88080,114731,95939,106575,70818,78178,97951,91471,87911,73257,70835,71983,73231,91606,100893,109390,77611,71989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a vacuole.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to vacuole","type":"exact"}],"termid":"GO:0072665","terms_by_termid":{"GO:0006623":null,"GO:0043328":null,"GO:0044395":null,"GO:0120113":null}}


id: MONDO:0005372
data:
  {"annotated_genes":["SJAG_04324","SJAG_01465","SJAG_02035","SJAG_02500","SJAG_02463","SJAG_00663","SJAG_02690","SJAG_05196","SJAG_02223","SJAG_03286","SJAG_01837","SJAG_04663","SJAG_02339","SJAG_03698","SJAG_03418","SJAG_00786","SJAG_00377","SJAG_04176","SJAG_01941","SJAG_02006","SJAG_03635","SJAG_03051","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[87147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[85349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[85179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[86369,86370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[86771,86772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[86039,86040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[87049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[86912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[85931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[85947,85948,85949,85950,85951,85952,85946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","definition":"The inability of the male to effect fertilization of an ovum after a specified period of unprotected intercourse. Male sterility is permanent infertility.","definition_xrefs":["MESH:D007248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:N46","ICD9:606.9","DOID:12336","icd11.foundation:753457327","UMLS:C0021364","EFO:0004248","MEDGEN:5796","SCTID:2904007","ICD9:606"],"synonyms":[{"name":"infertility disorder of male reproductive system","type":"exact"},{"name":"male reproductive system infertility","type":"exact"},{"name":"male reproductive system infertility disorder","type":"exact"}],"termid":"MONDO:0005372","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null},"xrefs":{"Monarch":{"xref_id":"0005372"}}}


id: MONDO:0012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 5","secondary_identifiers":["OMIM:612559","MEDGEN:436452","UMLS:C2675514"],"synonyms":[{"name":"Clls5","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012936","xrefs":{"Monarch":{"xref_id":"0012936"}}}


id: GO:0120101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hetero-hexameric complex of 2 membrane proteins, A and B, with stoichiometry A4B2. The A and B proteins form a channel through which flow the ions that power the bacterial-type flagellum. They form the stator, or nonrotating portion, of the flagellum motor with the B protein apparently attached to the peptidoglycan cell wall. Examples include the H+ driven MotA-MotB stator complex of Escherichia coli and Salmonella enterica, and the Na+ driven PomA-PomB stator complex of Vibrio and Shewanella species.","definition_xrefs":["PMID:10572114","PMID:25251856","PMID:12624192","GOC:cilia","PMID:24697492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial-type flagellum motor","termid":"GO:0120100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bacterial-type flagellum stator complex","synonyms":[{"name":"bacterial-type flagellum motor force generator complex","type":"exact"},{"name":"bacterial-type flagellum torque generator complex","type":"exact"}],"termid":"GO:0120101"}


id: FYPO:0007667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to shmoo tip","synonyms":[{"name":"increased protein localisation to shmoo tip","type":"exact"},{"name":"increased protein localization to mating projection tip","type":"exact"}],"termid":"FYPO:0007667"}


id: GO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a protein complex. Includes the synthesis of non-protein components, and those protein modifications that are involved in synthesis or assembly of the complex.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex biogenesis (obsolete GO:0070271)","synonyms":[{"name":"protein complex biogenesis and assembly","type":"exact"}],"termid":"GO:0070271"}


id: GO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"lys-lys specific dibasic protein processing","termid":"GO:0090475"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: PBO:0067727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 25","termid":"PBO:0067727"}


id: FYECO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hexestrol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ hexestrol","termid":"FYECO:0000348"}


id: PBO:0012059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0012059"}


id: MONDO:0005820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral hemorrhagic fever that is caused by the Lassa virus, which is transmitted by contact with infected rodents; it is characterized by fever, headache, malaise, myalgia, and hearing loss.","definition_xrefs":["NCIT:C128418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arenavirus hemorrhagic fever","termid":"MONDO:0005651"},{"relation_name":"is_a","term_name":"lassa virus infectious disease","termid":"MONDO:0044750"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lassa fever","secondary_identifiers":["Orphanet:99824","DOID:9537","MedDRA:10023927","MESH:D007835","GARD:19688","SCTID:19065005","UMLS:C0023092","EFO:0007338","ICD9:078.89","MEDGEN:7276","ICD10CM:A96.2","icd11.foundation:515020316"],"synonyms":[{"name":"LF","type":"exact"},{"name":"Lassa hemorrhagic fever","type":"exact"}],"termid":"MONDO:0005820","xrefs":{"Monarch":{"xref_id":"0005820"}}}


id: GO:0004331
data:
  {"annotated_genes":["SJAG_05314","SJAG_00039","SJAG_00685","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72969,74906,75965,78875],"is_not":false,"summary":null,"term":"GO:0004331"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose-6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0004330","Reactome:R-HSA-70262","RHEA:17289","Reactome:R-HSA-5628905","MetaCyc:3.1.3.46-RXN"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphatase activity","type":"related"}],"termid":"GO:0004331","terms_by_termid":{"GO:0004331":null}}


id: PBO:0088978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family plus-end directed microtubule motor Klp5","termid":"PBO:0088978"}


id: PBO:0064194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 2","termid":"PBO:0064194"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: PR:O42899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SCO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02563","PANTHER:PTHR12151:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sco1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.06","secondary_identifiers":["UniProtKB:O42899"],"synonyms":[{"name":"Spom972h-SCO1","type":"exact"}],"termid":"PR:O42899"}


id: GO:0015748
data:
  {"annotated_genes":["SJAG_03644","SJAG_01960","SJAG_01731","SJAG_02943","SJAG_01225","SJAG_03209","SJAG_00612","SJAG_03746","SJAG_03338","SJAG_04328","SJAG_16459","SJAG_02957","SJAG_03851","SJAG_00018","SJAG_02581","SJAG_05209","SJAG_03172","SJAG_03503","SJAG_04734","SJAG_01229","SJAG_02050","SJAG_00276","SJAG_00589","SJAG_00576","SJAG_04162","SJAG_03721","SJAG_00154","SJAG_04697","SJAG_00230","SJAG_03050","SJAG_00669","SJAG_06440","SJAG_00760","SJAG_03710","SJAG_04325","SJAG_05268","SJAG_00587","SJAG_01177","SJAG_05325","SJAG_02132","SJAG_04370","SJAG_01470","SJAG_04406","SJAG_02114","SJAG_00232","SJAG_02897","SJAG_00835","SJAG_03416","SJAG_03741","SJAG_01095","SJAG_00339","SJAG_01945","SJAG_03334","SJAG_00434","SJAG_03452","SJAG_02516","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[74509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[68511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[74583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[93309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[102596,102595,102597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001407"},{"annotations":[63702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[107535,104045,108667,97541,100526,98627,101286,105862,116268,107661,109540,89183,90866,97480,106753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[101361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[58937,102858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[70362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[107576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[92872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[103638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[93310,76540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[74592,59909,62608,90480,102220,90479,90484,74411,72815,71859,90486,101288,72786,90485,109526,90487,99474,90483,90482,90481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[79183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[93078,112274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[88321,74806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[75849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[75073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[112389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[77590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[66235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of organophosphate esters into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organophosphate esters are small organic molecules containing phosphate ester bonds.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00154":null,"SJAG_00230":null,"SJAG_00232":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00612":null,"SJAG_00669":null,"SJAG_00760":null,"SJAG_00835":null,"SJAG_01095":null,"SJAG_01177":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03334":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04370":null,"SJAG_04406":null,"SJAG_04697":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_05325":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organophosphate ester transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015748","terms_by_termid":{"GO:0001407":null,"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015917":null,"GO:0017121":null,"GO:0035348":null,"GO:0035436":null,"GO:0036085":null,"GO:0045332":null,"GO:0072334":null,"GO:0097624":null,"GO:0120010":null,"GO:0120112":null,"GO:0140021":null,"GO:0140331":null,"GO:1903790":null,"GO:1990519":null,"GO:1990536":null,"GO:1990544":null,"GO:1990545":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:0080095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylethanolamine + a sterol = a sterol ester + a lysophosphatidylethanolamine.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine-sterol O-acyltransferase activity","termid":"GO:0080095"}


id: GO:0086069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between a bundle of His cell and its surroundings that contributes to the process of the bundle of His cell communicating with a Purkinje myocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication","synonyms":[{"name":"atrioventricular junction myocyte to bundle branch myocyte","type":"narrow"},{"name":"bundle branch myocyte to Purkinje myocyte communication","type":"narrow"},{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication","type":"exact"},{"name":"bundle of His myocyte to atrioventricular junction myocyte","type":"narrow"},{"name":"ventricular conduction system cell to cell communication","type":"exact"}],"termid":"GO:0086069"}


id: MONDO:0006047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic adenocarcinoma","secondary_identifiers":["EFO:1000044","DOID:4074","ONCOTREE:PAAD","SCTID:700423003","MEDGEN:83800","NCIT:C8294","UMLS:C0281361"],"synonyms":[{"name":"PAAD","type":"related"},{"name":"adenocarcinoma - pancreas","type":"exact"},{"name":"adenocarcinoma of pancreas","type":"exact"},{"name":"adenocarcinoma of the pancreas","type":"exact"},{"name":"pancreas adenocarcinoma","type":"exact"},{"name":"pancreatic adenocarcinoma","type":"exact"}],"termid":"MONDO:0006047","xrefs":{"Monarch":{"xref_id":"0006047"}}}


id: MONDO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a occipital lobe.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital lobe neoplasm","secondary_identifiers":["DOID:910","UMLS:C1263889","NCIT:C5574","SCTID:126957005","MEDGEN:220389","ICD10CM:C71.4","ICD9:191.4"],"synonyms":[{"name":"malignant neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of the occipital lobe","type":"exact"},{"name":"occipital lobe neoplasm","type":"exact"},{"name":"occipital lobe neoplasm (disease)","type":"exact"},{"name":"occipital lobe tumor","type":"exact"},{"name":"occipital lobe tumour","type":"exact"},{"name":"tumor of occipital lobe","type":"exact"},{"name":"tumor of the occipital lobe","type":"exact"},{"name":"tumour of occipital lobe","type":"exact"},{"name":"tumour of the occipital lobe","type":"exact"}],"termid":"MONDO:0004709","xrefs":{"Monarch":{"xref_id":"0004709"}}}


id: GO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair protein (obsolete GO:0003685)","synonyms":[{"name":"DNA repair protein","type":"exact"}],"termid":"GO:0003685"}


id: PBO:0038382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_stressor","termid":"PBO:0038382"}


id: PBO:0059961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 6","termid":"PBO:0059961"}


id: MONDO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 23, with ataxia, deafness, liver dysfunction, and dilated cardiomyopathy","secondary_identifiers":["UMLS:C5562074","DOID:0070397","MEDGEN:1794284","OMIM:619688"],"synonyms":[{"name":"HLD23","type":"exact"}],"termid":"MONDO:0030514","xrefs":{"Monarch":{"xref_id":"0030514"}}}


id: PBO:0085773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; involved in vesicle formation and incorporation of specific secretory cargo; protein abundance increases in response to DNA replication stress","termid":"PBO:0085773"}


id: GO:2000220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pseudohyphal growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"regulates","term_name":"pseudohyphal growth","termid":"GO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pseudohyphal growth","termid":"GO:2000220"}


id: GO:0032481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"positively_regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon production","secondary_identifiers":["Reactome:R-HSA-1834949"],"synonyms":[{"name":"activation of type I interferon production","type":"narrow"},{"name":"positive regulation of type I IFN production","type":"exact"},{"name":"stimulation of type I interferon production","type":"narrow"},{"name":"up regulation of type I interferon production","type":"exact"},{"name":"up-regulation of type I interferon production","type":"exact"},{"name":"upregulation of type I interferon production","type":"exact"}],"termid":"GO:0032481"}


id: GO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right pattern formation","termid":"GO:0060972"}


id: PBO:0039213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C4","termid":"PBO:0039213"}


id: PBO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 42","termid":"PBO:0070934"}


id: GO:0003687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication factor (obsolete GO:0003687)","synonyms":[{"name":"DNA replication factor","type":"exact"}],"termid":"GO:0003687"}


id: PBO:0111064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog","termid":"PBO:0111064"}


id: PBO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase alpha","termid":"PBO:0042438"}


id: PBO:0034718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid particle hydrolase (predicted)","termid":"PBO:0034718"}


id: PBO:0049453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 7","termid":"PBO:0049453"}


id: GO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle organ development","termid":"GO:0060538"}


id: MONDO:0008822
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86496],"is_not":false,"summary":null,"term":"MONDO:0008822"}]},"cv_name":"mondo","definition":"Any arthrogryposis-renal dysfunction-cholestasis syndrome in which the cause of the disease is a mutation in the VPS33B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis-renal dysfunction-cholestasis syndrome","termid":"MONDO:0017123"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"arthrogryposis, renal dysfunction, and cholestasis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111353","GARD:15139","UMLS:C1859722","OMIM:208085","MEDGEN:347219"],"synonyms":[{"name":"ARCS1","type":"related"},{"name":"Arc syndrome","type":"related"},{"name":"VPS33B arthrogryposis-renal dysfunction-cholestasis syndrome","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis 1","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis type 1","type":"exact"},{"name":"arthrogryposis-renal dysfunction-cholestasis syndrome caused by mutation in VPS33B","type":"exact"}],"termid":"MONDO:0008822","terms_by_termid":{"MONDO:0008822":null},"xrefs":{"Monarch":{"xref_id":"0008822"}}}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: GO:0031975
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers, and may include a cell wall layer; also includes the space between layers.","definition_xrefs":["GOC:mah","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete envelope (obsolete GO:0031975)","termid":"GO:0031975"}


id: MONDO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyprolinemia","secondary_identifiers":["UMLS:C0268531","MESH:C562669","SCTID:25739007","ICD9:270.8","HP:0003260","OMIM:237000","MEDGEN:75691"],"synonyms":[{"name":"4 alpha hydroxy-L-proline oxidase deficiency","type":"related"},{"name":"4-hydroxy-L-proline oxidase deficiency","type":"related"},{"name":"HYDROXYPROLINEMIA","type":"related"},{"name":"Hydroxyprolinemia","type":"exact"},{"name":"hydroxyprolinemia","type":"exact"},{"name":"hydroxyprolinemia (disease)","type":"exact"}],"termid":"MONDO:0009374","xrefs":{"Monarch":{"xref_id":"0009374"}}}


id: GO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxyl group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular hydroxytransferase activity","secondary_identifiers":["EC:5.4.4.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring hydroxy groups","type":"exact"}],"termid":"GO:0050486"}


id: PBO:0081033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZC3H12A divergent transcript","termid":"PBO:0081033"}


id: MONDO:0017901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR1, leading to a residual response to IFN-gamma and, consequently, to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319569"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 27A","termid":"MONDO:0008856"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR1 deficiency","secondary_identifiers":["MEDGEN:1379275","UMLS:C4511091"],"synonyms":[{"name":"IFNGR1 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial IFNgammaR1 deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial interferon gamma receptor 1 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR1","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 1 deficiency","type":"exact"}],"termid":"MONDO:0017901","xrefs":{"Monarch":{"xref_id":"0017901"}}}


id: MONDO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess of the cornea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal abscess","secondary_identifiers":["DOID:11543","icd11.foundation:485862779","MEDGEN:56351","SCTID:64366002","ICD9:370.55","NCIT:C26969","UMLS:C0155091"],"termid":"MONDO:0001307","xrefs":{"Monarch":{"xref_id":"0001307"}}}


id: GO:0033732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate + 3 O2 = 2 H2O + 2 H2O2 + H+ + pyrroloquinoline quinone.","definition_xrefs":["EC:1.3.3.11","RHEA:10692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyrroloquinoline-quinone synthase activity","secondary_identifiers":["KEGG_REACTION:R07353","MetaCyc:RXN-11181"],"synonyms":[{"name":"6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,5,6,7,8-octahydroquinoline-2,4-dicarboxylate:oxygen oxidoreductase (cyclizing) activity","type":"related"},{"name":"PqqC","type":"related"}],"termid":"GO:0033732"}


id: GO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host (obsolete GO:0052133)","synonyms":[{"name":"positive aerotaxis within host","type":"exact"}],"termid":"GO:0052133"}


id: PBO:0076613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 31","termid":"PBO:0076613"}


id: PR:Q10305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rab GDP dissociation inhibitor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway GDP dissociation inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.12c","secondary_identifiers":["UniProtKB:Q10305"],"synonyms":[{"name":"SPAC22H10.12c","type":"related"},{"name":"Spom972h-GDI2","type":"exact"},{"name":"sec19","type":"related"}],"termid":"PR:Q10305"}


id: PBO:0089249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Taz1","termid":"PBO:0089249"}


id: GO:1904152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:18555783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"regulation of protein dislocation from ER","type":"exact"},{"name":"regulation of protein retrotranslocation from ER","type":"exact"},{"name":"regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904152"}


id: GO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine cyclase activity (obsolete GO:0018135)","synonyms":[{"name":"peptidyl-cysteine cyclase activity","type":"exact"}],"termid":"GO:0018135"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: PBO:0056550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiciliate differentiation and DNA synthesis associated cell cycle protein","termid":"PBO:0056550"}


id: GO:0042941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:jsg","GO:ew","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"alanine transport","termid":"GO:0032328"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"D-alanine transmembrane transport","termid":"GO:0042941"}


id: GO:1905692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an endoplasmic reticulum into its constituent components.","definition_xrefs":["GOC:autophagy","GOC:TermGenie","GOC:pr","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum disassembly","synonyms":[{"name":"ER disassembly","type":"exact"}],"termid":"GO:1905692"}


id: PBO:0050483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A11","termid":"PBO:0050483"}


id: MONDO:0024297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A collective term for nutritional disorders resulting from poor absorption or nutritional imbalance, and metabolic disorders resulting from defects in biosynthesis (ANABOLISM) or breakdown (CATABOLISM) of endogenous substances.","definition_xrefs":["MESH:D009750"],"gene_count":0,"genotype_count":0,"name":"obsolete nutritional or metabolic disease (obsolete MONDO:0024297)","secondary_identifiers":["ICD10CM:E00-E90"],"termid":"MONDO:0024297","xrefs":{"Monarch":{"xref_id":"0024297"}}}


id: GO:0102214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme A + ATP + an omega-hydroxy fatty acid = diphosphoric acid + AMP + a omega-hydroxyacyl-CoA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete omega-hydroxy fatty acyl-CoA synthetase activity (obsolete GO:0102214)","termid":"GO:0102214"}


id: PBO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borate transmembrane transporter (predicted)","termid":"PBO:0018096"}


id: PBO:0017531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0017531"}


id: PR:000085728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 and phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),Phos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated and phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MePhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"exact"},{"name":"hht3/Me(K9),Phos(S10)","type":"exact"}],"termid":"PR:000085728"}


id: GO:1901342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasculature development","synonyms":[{"name":"regulation of vascular system development","type":"related"}],"termid":"GO:1901342"}


id: GO:0102415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-gentiobioside + UDP-alpha-D-glucose = quercetin-3-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102415)","termid":"GO:0102415"}


id: SO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA less than 200 nucleotides long, usually with a specific secondary structure, that acts to regulate gene expression. These include short ncRNAs such as piRNA, miRNA and siRNAs (among others).","definition_xrefs":["PMID:28541282","SO:ma","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small_regulatory_ncRNA","synonyms":[{"name":"small regulatory ncRNA","type":"exact"}],"termid":"SO:0000370"}


id: GO:0072352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"tricarboxylic acid catabolic process","synonyms":[{"name":"tricarboxylate catabolic process","type":"exact"},{"name":"tricarboxylate catabolism","type":"exact"},{"name":"tricarboxylic acid breakdown","type":"exact"},{"name":"tricarboxylic acid catabolism","type":"exact"},{"name":"tricarboxylic acid degradation","type":"exact"}],"termid":"GO:0072352"}


id: PBO:0083856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2","termid":"PBO:0083856"}


id: PBO:0057647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1243","termid":"PBO:0057647"}


id: PBO:0065138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 1","termid":"PBO:0065138"}


id: PBO:0063008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 2","termid":"PBO:0063008"}


id: PBO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleic_acid_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030885"}


id: PBO:0080635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83","termid":"PBO:0080635"}


id: PATO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hermaphrodite","synonyms":[{"name":"intersex","type":"exact"}],"termid":"PATO:0001340"}


id: PBO:0039219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1 pseudogene 1","termid":"PBO:0039219"}


id: GO:0098601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-Selenomethionine + H2O => Orthophosphate + Diphosphate + Se-Adenosylselenomethionine.","definition_xrefs":["PMID:2339986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"selenomethionine adenosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408551","RHEA:31211"],"termid":"GO:0098601"}


id: PBO:0026880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RITS_complex_assembly","termid":"PBO:0026880"}


id: GO:0036268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through water, often by means of active fin movement.","definition_xrefs":["PMID:22459995","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swimming","termid":"GO:0036268"}


id: PBO:0086128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086128"}


id: GO:1904964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phytol biosynthetic process.","definition_xrefs":["PMID:24275650","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"is_a","term_name":"regulation of phytol biosynthetic process","termid":"GO:1904963"},{"relation_name":"positively_regulates","term_name":"phytol biosynthetic process","termid":"GO:0033520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phytol biosynthetic process","synonyms":[{"name":"activation of phytol anabolism","type":"narrow"},{"name":"activation of phytol biosynthesis","type":"narrow"},{"name":"activation of phytol biosynthetic process","type":"narrow"},{"name":"activation of phytol formation","type":"narrow"},{"name":"activation of phytol synthesis","type":"narrow"},{"name":"positive regulation of phytol anabolism","type":"exact"},{"name":"positive regulation of phytol biosynthesis","type":"exact"},{"name":"positive regulation of phytol formation","type":"exact"},{"name":"positive regulation of phytol synthesis","type":"exact"},{"name":"up regulation of phytol anabolism","type":"exact"},{"name":"up regulation of phytol biosynthesis","type":"exact"},{"name":"up regulation of phytol biosynthetic process","type":"exact"},{"name":"up regulation of phytol formation","type":"exact"},{"name":"up regulation of phytol synthesis","type":"exact"},{"name":"up-regulation of phytol anabolism","type":"exact"},{"name":"up-regulation of phytol biosynthesis","type":"exact"},{"name":"up-regulation of phytol biosynthetic process","type":"exact"},{"name":"up-regulation of phytol formation","type":"exact"},{"name":"up-regulation of phytol synthesis","type":"exact"},{"name":"upregulation of phytol anabolism","type":"exact"},{"name":"upregulation of phytol biosynthesis","type":"exact"},{"name":"upregulation of phytol biosynthetic process","type":"exact"},{"name":"upregulation of phytol formation","type":"exact"},{"name":"upregulation of phytol synthesis","type":"exact"}],"termid":"GO:1904964"}


id: GO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"receptor catabolic process","synonyms":[{"name":"receptor breakdown","type":"exact"},{"name":"receptor catabolism","type":"exact"},{"name":"receptor degradation","type":"exact"}],"termid":"GO:0032801"}


id: PR:O13980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu29 gene.","definition_xrefs":["UniProtKB:O13980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.05","synonyms":[{"name":"Spom972h-meu29","type":"exact"}],"termid":"PR:O13980"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mlr","PMID:35325114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: PBO:0063145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ crumbs cell polarity complex component","termid":"PBO:0063145"}


id: GO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + NAD+ = H+ + NADH + oxomalonate.","definition_xrefs":["EC:1.1.1.167","RHEA:11284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymalonate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02969","MetaCyc:HYDROXYMALONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"hydroxymalonate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047993"}


id: PBO:0029615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029615"}


id: PBO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1","termid":"PBO:0043180"}


id: MONDO:0013284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 4","secondary_identifiers":["GARD:15669","DOID:0081147","OMIM:613494","UMLS:C3150739","MEDGEN:462089"],"synonyms":[{"name":"CVID4","type":"related"},{"name":"antibody deficiency due to Baffr defect","type":"related"},{"name":"immunodeficiency, common variable, 4","type":"exact"},{"name":"immunodeficiency, common variable, type 4","type":"exact"}],"termid":"MONDO:0013284","xrefs":{"Monarch":{"xref_id":"0013284"}}}


id: FYPO:0001724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased GTP binding","termid":"FYPO:0001724"}


id: GO:0015730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of propionate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transmembrane transport","termid":"GO:0015913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"propanoate transmembrane transport","synonyms":[{"name":"propanoate transport","type":"broad"},{"name":"propionate transport","type":"exact"}],"termid":"GO:0015730"}


id: GO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud development","termid":"GO:0001657"}


id: MONDO:0032850
data:
  {"annotated_genes":["SJAG_04732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86814],"is_not":false,"summary":null,"term":"MONDO:0032850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04732":null},"genotype_count":0,"is_obsolete":false,"name":"neurooculocardiogenitourinary syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684841","OMIM:618652","UMLS:C5231443","DOID:0111675"],"synonyms":[{"name":"NEUROOCULOCARDIOGENITOURINARY SYNDROME","type":"related"},{"name":"NOCGUS","type":"related"}],"termid":"MONDO:0032850","terms_by_termid":{"MONDO:0032850":null},"xrefs":{"Monarch":{"xref_id":"0032850"}}}


id: MONDO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"astigmatism","termid":"MONDO:0011284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"regular astigmatism","secondary_identifiers":["ICD9:367.21","UMLS:C0152193","DOID:11781","SCTID:68905002","icd11.foundation:879600754","MEDGEN:508921"],"termid":"MONDO:0001364","xrefs":{"Monarch":{"xref_id":"0001364"}}}


id: GO:1901935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-caryophyllene metabolic process","synonyms":[{"name":"beta-caryophyllene metabolism","type":"exact"}],"termid":"GO:1901935"}


id: MONDO:0011227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-auditory canal atresia-mandibular hypoplasia-skeletal anomalies syndrome","secondary_identifiers":["GARD:17633","OMIM:602471","MEDGEN:355971","Orphanet:397623","SCTID:417081007","UMLS:C1865361","MESH:C566544"],"synonyms":[{"name":"SAMS","type":"related"},{"name":"SAMS syndrome","type":"exact"},{"name":"short stature, auditory canal atresia, mandibular hypoplasia, and skeletal abnormalities","type":"related"},{"name":"short stature, auditory canal atresia, mandibular hypoplasia, skeletal abnormalities","type":"exact"}],"termid":"MONDO:0011227","xrefs":{"Monarch":{"xref_id":"0011227"}}}


id: PBO:0056551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCL1 apoptosis regulator, BCL2 family member","termid":"PBO:0056551"}


id: PBO:0079177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 6, pseudogene","termid":"PBO:0079177"}


id: MONDO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the spinal cord during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood spinal cord tumor","secondary_identifiers":["DOID:3637","UMLS:C1134515","MEDGEN:209512","NCIT:C9234"],"synonyms":[{"name":"childhood spinal cord neoplasm","type":"exact"},{"name":"paediatric spinal cord neoplasm","type":"exact"},{"name":"pediatric spinal cord neoplasm","type":"exact"},{"name":"spinal cord neoplasm of childhood","type":"exact"}],"termid":"MONDO:0002716","xrefs":{"Monarch":{"xref_id":"0002716"}}}


id: PBO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9-like pseudogene 1","termid":"PBO:0044065"}


id: PBO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a (predicted)","termid":"PBO:0003108"}


id: GO:0061234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric glomerulus are generated and organized. The mesonephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerulus morphogenesis","termid":"GO:0061234"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10334994","PMID:10381407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["kegg.module:M00893","MetaCyc:PWY-7535"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: GO:0032843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 RSH + ROOH = RSSR + ROH + H2O. This reaction is the thiol-dependent conversion of an organic hydroperoxide to the corresponding alcohol.","definition_xrefs":["PMID:12540833","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroperoxide reductase activity","termid":"GO:0032843"}


id: PBO:0054269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1655","termid":"PBO:0054269"}


id: GO:0140709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling in which Wnt binding to its receptor on the surface a the target cell results in internalization and cleavage of the frizzled receptor to yield a C-terminal fragment that is imported into the nucleus. The frizzled C-terminal fragment is incorporated into large ribonucleoprotein particles and stimulates their egress via nuclear budding.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Frizzled Nuclear Import pathway","synonyms":[{"name":"FNI","type":"broad"},{"name":"Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140709"}


id: PBO:0054340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1733","termid":"PBO:0054340"}


id: PBO:0078063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 53","termid":"PBO:0078063"}


id: MONDO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligodendroglioma (obsolete MONDO:0002539)","termid":"MONDO:0002539","xrefs":{"Monarch":{"xref_id":"0002539"}}}


id: PBO:0029113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase","termid":"PBO:0029113"}


id: PR:O14090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.07c gene.","definition_xrefs":["UniProtKB:O14090","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.07c","synonyms":[{"name":"Spom972h-SPAC2F3.07c","type":"exact"}],"termid":"PR:O14090"}


id: PR:Q9UUE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.03c","secondary_identifiers":["UniProtKB:Q9UUE6"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KARS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE6"}


id: PBO:0088559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp7","termid":"PBO:0088559"}


id: MONDO:0031083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 77","secondary_identifiers":["UMLS:C5774245","DOID:0070576","OMIM:620103","MEDGEN:1824018"],"synonyms":[{"name":"SPGF77","type":"exact"},{"name":"spermatogenic failure 77","type":"exact"}],"termid":"MONDO:0031083","xrefs":{"Monarch":{"xref_id":"0031083"}}}


id: MONDO:0007949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marshall syndrome is a malformation syndrome that is characterized by facial dysmorphism, severe hypoplasia of the nasal bones and frontal sinuses, ocular involvement, early-onset hearing loss, skeletal and anhidrotic ectodermal anomalies and short stature with spondyloepiphyseal dysplasia and early-onset osteoarthritis.","definition_xrefs":["Orphanet:560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"Marshall syndrome","secondary_identifiers":["UMLS:C0265235","ICD9:759.89","GARD:6984","NORD:1407","OMIM:154780","SCTID:33410002","MEDGEN:82694","NCIT:C128115","DOID:0111510","icd11.foundation:1401051186","MESH:C536025"],"synonyms":[{"name":"MRSHS","type":"related"},{"name":"Marshall syndrome","type":"exact"},{"name":"deafness, myopia, cataract, saddle nose-Marshall type","type":"related"}],"termid":"MONDO:0007949","xrefs":{"Monarch":{"xref_id":"0007949"}}}


id: GO:0051698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-saccharopine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + L-glutamate.","definition_xrefs":["PMID:16233628","RHEA:28210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"saccharopine oxidase activity","secondary_identifiers":["EC:1.5.3.18"],"synonyms":[{"name":"SAX activity","type":"broad"}],"termid":"GO:0051698"}


id: GO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of pseudohyphal septin ring assembly","termid":"GO:0062166"}


id: MONDO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant hyperinsulinism due to SUR1 deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by hypoglycemic epiosodes that are usually mild, escaping detection during infancy and usually a good clinical response to diazoxide. Autosomal dominant hyperinsulinism due to SUR1 deficiency usually has a milder phenotype when compared to that resulting from recessive K-ATP mutations (recessive forms of Diazoxide-resistant hyperinsulinism).","definition_xrefs":["Orphanet:276575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant hyperinsulinism due to SUR1 deficiency","secondary_identifiers":["UMLS:C4274080","MEDGEN:900764","GARD:17283","SCTID:717046003"],"synonyms":[{"name":"autosomal dominant hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"}],"termid":"MONDO:0017184","xrefs":{"Monarch":{"xref_id":"0017184"}}}


id: PBO:0082699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Mcm2-7 hexameric helicase complex; MCM2-7 primes origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation in S-phase; forms an Mcm4p-6p-7p subcomplex","termid":"PBO:0082699"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0045757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 1","termid":"PBO:0045757"}


id: PBO:0089709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP3 subunit Alp6","termid":"PBO:0089709"}


id: PBO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease tRNAse Z, Trz2","termid":"PBO:0015681"}


id: PR:Q9P6L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase zeta catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10322:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.10","secondary_identifiers":["UniProtKB:Q9P6L6"],"synonyms":[{"name":"SPAC688.10","type":"related"},{"name":"Spom972h-REV3L","type":"exact"},{"name":"protein reversionless 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6L6"}


id: PBO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_by","termid":"PBO:0012825"}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: MONDO:0018377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with avascular necrosis (obsolete MONDO:0018377)","secondary_identifiers":["Orphanet:399185"],"termid":"MONDO:0018377","xrefs":{"Monarch":{"xref_id":"0018377"}}}


id: GO:0006188
data:
  {"annotated_genes":["SJAG_02364","SJAG_03355","SJAG_01814","SJAG_01661","SJAG_01081","SJAG_03140","SJAG_04123","SJAG_06634","SJAG_02850","SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59973,64270,65234,57113,57982,69655,71375,76723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[64599,75378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"IMP anabolism","type":"exact"},{"name":"IMP biosynthesis","type":"exact"},{"name":"IMP formation","type":"exact"},{"name":"IMP synthesis","type":"exact"}],"termid":"GO:0006188","terms_by_termid":{"GO:0006189":null,"GO:0032264":null}}


id: GO:0102482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-deoxy-D-glucuronate = 5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["RHEA:25840","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-deoxy-D-glucuronate isomerase activity","secondary_identifiers":["EC:5.3.1.30","MetaCyc:RXN-14150"],"termid":"GO:0102482"}


id: PBO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu1","termid":"PBO:0004112"}


id: GO:0099087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in axons, towards the presynapse.","definition_xrefs":["PMID:26586091","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde axonal transport of messenger ribonucleoprotein complex","synonyms":[{"name":"anterograde axonal transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0099087"}


id: MONDO:0009446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis-intellectual disability-dwarfism-renal impairment syndrome is characterized by nonbullous congenital ichthyosis, intellectual deficit, dwarfism and renal impairment. It has been described in four members of one Iranian family. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis-intellectual disability-dwarfism-renal impairment syndrome","secondary_identifiers":["OMIM:242530","GARD:4641","MEDGEN:340966","MESH:C536274","UMLS:C1855787"],"synonyms":[{"name":"Passwell-Goodman-Siprkowski syndrome","type":"exact"},{"name":"ichthyosis intellectual deficit dwarfism renal impairment","type":"related"},{"name":"ichthyosis, intellectual disability, dwarfism and renal impairment","type":"related"},{"name":"ichthyosis, intellectual disability, dwarfism, and renal impairment","type":"related"},{"name":"ichthyosis, mental retardation, dwarfism and renal impairment","type":"related"},{"name":"ichthyosis, mental retardation, dwarfism, and renal impairment","type":"related"}],"termid":"MONDO:0009446","xrefs":{"Monarch":{"xref_id":"0009446"}}}


id: PBO:0086734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to heat, pH disturbances, ionic stress, and various chemicals; hypersensitivity to hygromycin B indicative of defects in vacuolar trafficking","termid":"PBO:0086734"}


id: PBO:0051119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-4 (pseudogene)","termid":"PBO:0051119"}


id: PBO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 1","termid":"PBO:0060850"}


id: GO:0040020
data:
  {"annotated_genes":["SJAG_00364","SJAG_03327","SJAG_03438","SJAG_01082","SJAG_04287","SJAG_01680","SJAG_00266","SJAG_02712","SJAG_04259","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96923],"is_not":false,"summary":null,"term":"GO:0040020"},{"annotations":[107982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[106330,114518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[106629,116086,89014,114278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[107985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[113804],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[89016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[101341],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes.","definition_xrefs":["GOC:ma","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_02712":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis","type":"broad"}],"termid":"GO:0040020","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: MONDO:0014550
data:
  {"annotated_genes":["SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85381,85382],"is_not":false,"summary":null,"term":"MONDO:0014550"}]},"cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the CALM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015695","DOID:0110656","GARD:16074","MEDGEN:864132","OMIM:616249"],"synonyms":[{"name":"CALM2 long QT syndrome","type":"exact"},{"name":"LQT15","type":"exact"},{"name":"long QT syndrome 15","type":"exact"},{"name":"long QT syndrome caused by mutation in CALM2","type":"exact"},{"name":"long QT syndrome type 15","type":"exact"}],"termid":"MONDO:0014550","terms_by_termid":{"MONDO:0014550":null},"xrefs":{"Monarch":{"xref_id":"0014550"}}}


id: PBO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein Uds1","termid":"PBO:0003684"}


id: PBO:0057509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 627","termid":"PBO:0057509"}


id: GO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of oxidative phosphorylation","synonyms":[{"name":"OXPHOS","type":"exact"}],"termid":"GO:0002082"}


id: GO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; centriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome.","definition_xrefs":["PMID:12403812","PMID:10579718","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centriolar satellite","termid":"GO:0034451"}


id: GO:1900149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:TermGenie","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"positively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell migration","synonyms":[{"name":"activation of Schwann cell migration","type":"narrow"},{"name":"up regulation of Schwann cell migration","type":"exact"},{"name":"up-regulation of Schwann cell migration","type":"exact"},{"name":"upregulation of Schwann cell migration","type":"exact"}],"termid":"GO:1900149"}


id: PBO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, conserved in yeast and apicomplexa","termid":"PBO:0090362"}


id: PBO:0059624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDM2 binding protein","termid":"PBO:0059624"}


id: PBO:0051170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-54 (pseudogene)","termid":"PBO:0051170"}


id: GO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by biochemical signaling: hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure mediated by a chemical signal","synonyms":[{"name":"blood pressure regulation mediated by a chemical signal","type":"exact"}],"termid":"GO:0003044"}


id: GO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia) located within a cell of a host organism.","definition_xrefs":["GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell PML body","synonyms":[{"name":"host cell PML NB","type":"exact"},{"name":"host cell PML nuclear body","type":"exact"}],"termid":"GO:0075341"}


id: PBO:0049051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 50","termid":"PBO:0049051"}


id: MONDO:0958262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated primary pigmented nodular adrenocortical disease","secondary_identifiers":["MEDGEN:1853165","Orphanet:647772","UMLS:C5816750"],"termid":"MONDO:0958262","xrefs":{"Monarch":{"xref_id":"0958262"}}}


id: MONDO:0012319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 3","secondary_identifiers":["OMIM:609633","MEDGEN:351270","MESH:C566501","UMLS:C1864994"],"synonyms":[{"name":"MAFD3","type":"exact"},{"name":"MAJOR affective disorder 3","type":"related"},{"name":"bipolar affective disorder, early-onset","type":"related"},{"name":"major affective disorder 3","type":"exact"},{"name":"major affective disorder 3, early onset","type":"exact"}],"termid":"MONDO:0012319","xrefs":{"Monarch":{"xref_id":"0012319"}}}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: GO:0033723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoroacetaldehyde + NAD+ + H2O = fluoroacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fluoroacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:16677"],"synonyms":[{"name":"fluoroacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033723"}


id: GO:1990404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amino acyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-amino acyl-[protein] + nicotinamide.","definition_xrefs":["PMID:1899243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein mono-ADP-ribosyltransferase activity","secondary_identifiers":["Wikipedia:ADP-ribosylation"],"synonyms":[{"name":"NAD+ ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+-protein ADP-ribosyltransferase activity","type":"broad"},{"name":"protein ADP-ribosylase activity","type":"exact"},{"name":"protein ADP-ribosyltransferase activity","type":"broad"},{"name":"protein mono-ADP-ribosyltransferase activity","type":"exact"},{"name":"ribosylase activity","type":"broad"}],"termid":"GO:1990404"}


id: PBO:0084072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase that associates with nuclear 60S pre-ribosomes; required for export of 60S ribosomal subunits from the nucleus","termid":"PBO:0084072"}


id: PBO:0085005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Gzf3p; DAL80 has a paralog, GZF3, that arose from the whole genome duplication","termid":"PBO:0085005"}


id: MONDO:0004841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Global enlargement of the renal parenchyma in one or both kidneys.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hypertrophy","secondary_identifiers":["SCTID:88531004","ICD9:593.1","UMLS:C0156259","MEDGEN:510218","NCIT:C122991","DOID:9622","ICD10CM:N28.81"],"synonyms":[{"name":"hypertrophy of the kidney","type":"exact"},{"name":"renal Hypertrophy","type":"exact"}],"termid":"MONDO:0004841","xrefs":{"Monarch":{"xref_id":"0004841"}}}


id: MONDO:0009354
data:
  {"annotated_genes":["SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85211,85212],"is_not":false,"summary":null,"term":"MONDO:0009354"}]},"cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the MTRR gene, encoding methionine synthase reductase. It is characterized by homocystinuria and megaloblastic anemia.","definition_xrefs":["NCIT:C142173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0006025","MONDO:0004736","MONDO:0005570","MONDO:0005066"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:344640","NANDO:2201109","DOID:0050732","DOID:0112255","OMIM:236270","GARD:3576","Orphanet:2169","MESH:C565510","UMLS:C1856057"],"synonyms":[{"name":"HMAE","type":"related"},{"name":"functional methionine synthase deficiency type cblE","type":"exact"},{"name":"homocystinuria due to defect in methylation Cbl e","type":"related"},{"name":"homocystinuria-megaloblastic Anaemia due to defect in cobalamin metabolism, cblE complementation type","type":"related"},{"name":"homocystinuria-megaloblastic Anemia due to defect in cobalamin metabolism, cblE complementation type","type":"related"},{"name":"homocystinuria-megaloblastic anemia, cbl e type","type":"exact"},{"name":"homocystinuria-megaloblastic anemia, cblE complementation type","type":"related"},{"name":"methylcobalamin deficiency type cblE","type":"exact"},{"name":"methylcobalamin deficiency, cblE type","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblE","type":"related"},{"name":"vitamin B12-responsive homocystinuria, cblE type","type":"related"}],"termid":"MONDO:0009354","terms_by_termid":{"MONDO:0009354":null},"xrefs":{"Monarch":{"xref_id":"0009354"}}}


id: GO:1905147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:22161164","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"smooth muscle hypertrophy","termid":"GO:0014895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle hypertrophy","termid":"GO:1905147"}


id: GO:0007472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the wing disc are generated and organized. This includes the transformation of a wing imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc morphogenesis","synonyms":[{"name":"wing disc metamorphosis","type":"exact"}],"termid":"GO:0007472"}


id: PBO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p31.2)","termid":"PBO:0047850"}


id: MONDO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"non-recovering obstetric brachial plexus lesion","secondary_identifiers":["GARD:21826","MEDGEN:1810145","Orphanet:439202","UMLS:C5680048"],"synonyms":[{"name":"chronic obstetric brachial plexus injury","type":"exact"},{"name":"chronic obstetric brachial plexus palsy","type":"exact"},{"name":"non-recovering OBPI","type":"exact"},{"name":"non-recovering OBPL","type":"exact"}],"termid":"MONDO:0018587","xrefs":{"Monarch":{"xref_id":"0018587"}}}


id: PBO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med11 (predicted)","termid":"PBO:0001679"}


id: PBO:0076455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 1","termid":"PBO:0076455"}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: PBO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ltv1 (predicted)","termid":"PBO:0001770"}


id: PBO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNS1/SUR4 family protein (predicted)","termid":"PBO:0000242"}


id: PBO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1690 family protein","termid":"PBO:0004433"}


id: MONDO:0020850
data:
  {"annotated_genes":["SJAG_03635","SJAG_01465","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86303,86304,86305],"is_not":false,"summary":null,"term":"MONDO:0020850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748219","OMIM:618109","MEDGEN:1648401","DOID:0081226","GARD:22578"],"synonyms":[{"name":"MRT65","type":"exact"},{"name":"intellectual disability, autosomal recessive 65","type":"exact"},{"name":"mental retardation, autosomal recessive 65","type":"exact"}],"termid":"MONDO:0020850","terms_by_termid":{"MONDO:0020850":null},"xrefs":{"Monarch":{"xref_id":"0020850"}}}


id: MOD:00267
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively dioxygenates an L-cysteine residue to L-cysteine sulfinic acid.","definition_xrefs":["ChEBI:16345","Unimod:425#C","PubMed:12686488","PubMed:9252331","PubMed:9586994","RESID:AA0262","OMSSA:162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine sulfinic acid","synonyms":[{"name":"(2R)-2-amino-3-sulfinopropanoic acid","type":"exact"},{"name":"2-amino-2-carboxyethanesulfinic acid","type":"exact"},{"name":"2-amino-3-(dioxido-lambda(6)-sulfanyl)propanoic acid [tautomer]","type":"exact"},{"name":"2-amino-3-sulfonylpropanoic acid [tautomer]","type":"exact"},{"name":"3-sulfinoalanine","type":"exact"},{"name":"3-sulphinoalanine","type":"exact"},{"name":"CysO2H","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-cysteine sulfinic acid","type":"exact"},{"name":"MOD_RES Cysteine sulfinic acid (-SO2H)","type":"exact"},{"name":"S-cysteinesulfinic acid","type":"exact"},{"name":"S-sulfinocysteine","type":"exact"},{"name":"cysteine sulphinic acid","type":"exact"},{"name":"cysteine-S,S-dioxide [tautomer]","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"sulfinicacid","type":"exact"}],"termid":"MOD:00267"}


id: GO:0009205
data:
  {"annotated_genes":["SJAG_03925","SJAG_06621","SJAG_01298","SJAG_00633","SJAG_00685","SJAG_00915","SJAG_01310","SJAG_04048","SJAG_06622","SJAG_01471","SJAG_03852","SJAG_04122","SJAG_04422","SJAG_02564","SJAG_02009","SJAG_03828","SJAG_02135","SJAG_03903","SJAG_00133","SJAG_02038","SJAG_02785","SJAG_02107","SJAG_04849","SJAG_00839","SJAG_04334","SJAG_02945","SJAG_02369","SJAG_04495","SJAG_07003","SJAG_00438","SJAG_00136","SJAG_04192","SJAG_00461","SJAG_03373","SJAG_00027","SJAG_03660","SJAG_00605","SJAG_00542","SJAG_02598","SJAG_05204","SJAG_02796","SJAG_03114","SJAG_MIT37","SJAG_MIT09","SJAG_00836","SJAG_00985","SJAG_02105","SJAG_05314","SJAG_02887","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67361,59403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[109406,109409,109410,116376,105471,97986,103387,105472,105841,77806,103641,109407,109411,98261,94985,105470,109405,94495,105840,109408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[111592,98179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[64536,74951,102242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[72967,75963],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118032],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[67231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[107916,94814,119088,119099,119094,92821,103653,103682,101822,115871,103038,89084,105021,108805,93252,93838,107824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[69941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009205","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0015986":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905707":null}}


id: MONDO:0007595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor VII and Factor VIII, combined deficiency of","secondary_identifiers":["MESH:C565025","OMIM:134430","UMLS:C1851377","MEDGEN:341995"],"synonyms":[{"name":"factor 7 and Factor VIII, combined deficiency of","type":"related"},{"name":"factor VII and Factor VIII, combined deficiency of","type":"exact"},{"name":"familial multiple coagulation Factor deficiency 4","type":"related"},{"name":"multiple coagulation Factor deficiency 4","type":"related"}],"termid":"MONDO:0007595","xrefs":{"Monarch":{"xref_id":"0007595"}}}


id: PBO:0074666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 52","termid":"PBO:0074666"}


id: GO:0018648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanesulfonate + NADH + H+ + O2 = formaldehyde + NAD+ + sulfite + H2O.","definition_xrefs":["EC:1.14.13.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methanesulfonate monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-9770","RHEA:26077"],"synonyms":[{"name":"MSA monooxygenase activity","type":"related"},{"name":"MSAMO activity","type":"related"},{"name":"mesylate monooxygenase activity","type":"related"},{"name":"methanesulfonate,FMNH2:oxygen oxidoreductase activity","type":"related"},{"name":"methanesulfonate,NADH:oxygen oxidoreductase activity","type":"exact"},{"name":"methanesulfonic acid monooxygenase activity","type":"related"},{"name":"methanesulphonic acid monooxygenase activity","type":"exact"}],"termid":"GO:0018648"}


id: PBO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain","termid":"PBO:0001327"}


id: GO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of mature B cells in the peripheral lymphoid tissues: the blood, lymph nodes, spleen, and mucosal-associated lymphoid tissue.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"},{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell tolerance induction","synonyms":[{"name":"peripheral B lymphocyte tolerance induction","type":"exact"},{"name":"peripheral B-cell tolerance induction","type":"exact"},{"name":"peripheral B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002451"}


id: GO:2000809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle clustering.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle clustering","termid":"GO:2000807"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle clustering","termid":"GO:0097091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle clustering","termid":"GO:2000809"}


id: PBO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 14","termid":"PBO:0046841"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: MONDO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallopian tube carcinoma that has developed in relatives of patients that have a history of fallopian tube carcinoma.","definition_xrefs":["NCIT:C40455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary fallopian tube carcinoma","secondary_identifiers":["MEDGEN:307556","UMLS:C1512418","DOID:7266"],"synonyms":[{"name":"familial fallopian tube carcinoma","type":"exact"},{"name":"familiar fallopian tube carcinoma","type":"related"},{"name":"hereditary fallopian tube cancer","type":"exact"},{"name":"hereditary fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0004166","xrefs":{"Monarch":{"xref_id":"0004166"}}}


id: PR:Q04665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein G(z) subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.13c","secondary_identifiers":["UniProtKB:Q04665"],"synonyms":[{"name":"GP2-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNAZ","type":"exact"}],"termid":"PR:Q04665"}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_00392","SJAG_04546","SJAG_01592","SJAG_03398","SJAG_01019","SJAG_00695","SJAG_00635","SJAG_01461","SJAG_04577","SJAG_00636","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111187],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[111920,118415,70071,98151,110479,78429,102626,111090,106530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[70336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[71927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04546":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null,"GO:0019547":null,"GO:0042450":null}}


id: GO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}


id: FYPO:0000294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any RNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"RNA metabolism phenotype","synonyms":[{"name":"RNA metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"RNA metabolism phenotype during vegetative growth","type":"exact"},{"name":"fission yeast RNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000294"}


id: PBO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, Fip1 homolog (predicted)","termid":"PBO:0000575"}


id: PR:Q9USH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C825.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.04c","synonyms":[{"name":"Spom972h-naa40","type":"exact"}],"termid":"PR:Q9USH6"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0085043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; deletion affects telomere maintenance via recombination","termid":"PBO:0085043"}


id: PBO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.24","termid":"PBO:0001726"}


id: PBO:0040779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein","termid":"PBO:0040779"}


id: GO:0032335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of activin secretion","termid":"GO:0032335"}


id: FYPO:0000412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which plasma membrane fusion involved in cytogamy is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell fusion during mating","synonyms":[{"name":"abnormal cell fusion during conjugation","type":"exact"},{"name":"abnormal plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"cell fusion: abnormal","type":"related"}],"termid":"FYPO:0000412"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:24415760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: PR:Q9US02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC664.12c gene.","definition_xrefs":["UniProtKB:Q9US02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.12c","synonyms":[{"name":"SDH assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC664.12c","type":"exact"}],"termid":"PR:Q9US02"}


id: GO:0006741
data:
  {"annotated_genes":["SJAG_03946","SJAG_01566","SJAG_01582"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70959,77885,79822],"is_not":false,"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP+, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_01582":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NADP (oxidized) biosynthesis","type":"exact"},{"name":"NADP (oxidized) biosynthetic process","type":"exact"},{"name":"NADP (reduced) biosynthesis","type":"exact"},{"name":"NADP (reduced) biosynthetic process","type":"exact"},{"name":"NADP anabolism","type":"exact"},{"name":"NADP biosynthesis","type":"exact"},{"name":"NADP formation","type":"exact"},{"name":"NADP synthesis","type":"exact"},{"name":"NADPH biosynthesis","type":"exact"},{"name":"NADPH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"oxidized NADP biosynthesis","type":"exact"},{"name":"oxidized NADP biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"},{"name":"reduced NADP biosynthesis","type":"exact"},{"name":"reduced NADP biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate biosynthetic process","type":"exact"}],"termid":"GO:0006741","terms_by_termid":{"GO:0006741":null}}


id: MONDO:0023038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccentrochondrodysplasia (obsolete MONDO:0023038)","termid":"MONDO:0023038","xrefs":{"Monarch":{"xref_id":"0023038"}}}


id: PBO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1614","termid":"PBO:0052328"}


id: PR:P36612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF9","PRO:DNx","OMA:SCHPO02762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.07c","secondary_identifiers":["UniProtKB:P36612"],"synonyms":[{"name":"Spom972h-PSMC1","type":"exact"},{"name":"protein mts2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36612"}


id: GO:0048785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process.","definition_xrefs":["GOC:bf","GOC:dh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching gland development","termid":"GO:0048785"}


id: PBO:0040183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asporin","termid":"PBO:0040183"}


id: PBO:0038869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 3","termid":"PBO:0038869"}


id: GO:0072060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer medullary collecting duct over time, from its formation to the mature structure. The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer medullary collecting duct development","termid":"GO:0072060"}


id: FYPO:0005636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein from kinetochores to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to spindle during meiosis I","termid":"FYPO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization from kinetochore to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein movement from kinetochore to spindle during meiosis I","type":"related"},{"name":"delayed protein localization from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle from kinetochore during meiosis I","type":"exact"}],"termid":"FYPO:0005636"}


id: PBO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 2","termid":"PBO:0051617"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: GO:2001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-arabinofuranose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-arabinofuranose binding","termid":"GO:2001084"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:11104907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: GO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bacterial-type RNA polymerase core enzyme, typically consisting of two alpha, one beta, one beta prime, and one omega subunit.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bacterial-type RNA polymerase core enzyme binding","synonyms":[{"name":"eubacterial-type RNA polymerase core enzyme binding","type":"exact"}],"termid":"GO:0001000"}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: PBO:0039081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior gradient 2, protein disulphide isomerase family member","termid":"PBO:0039081"}


id: PATO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking few of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderately well differentiated","termid":"PATO:0002111"}


id: GO:2001245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylcholine formation","type":"exact"},{"name":"regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001245"}


id: GO:0098604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Se-Adenosyl-L-selenohomocysteine + H2O => Adenosine + Selenohomocysteine.","definition_xrefs":["GOC:dos","PMID:1711890","PMID:7305945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trialkylsulfonium hydrolase activity","termid":"GO:0016802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"adenosylselenohomocysteinase activity","secondary_identifiers":["Reactome:R-HSA-2408532"],"termid":"GO:0098604"}


id: PBO:0017696
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptide Trna Hydrolase","termid":"PBO:0017696"}


id: GO:0099620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-amino-4-deoxy-beta-L-arabinopyranose + 2-oxoglutarate = UDP-beta-L-threo-pentapyranos-4-ulose + L-glutamate.","definition_xrefs":["GOC:al","PMID:12429098","PMID:12704196","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-4-amino-4-deoxy-L-arabinose aminotransferase","secondary_identifiers":["RHEA:24710","EC:2.6.1.87"],"synonyms":[{"name":"UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-L-arabinose---oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-beta-L-arabinose:2-oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-Ara4O aminotransferase","type":"exact"},{"name":"UDP-L-Ara4N transaminase","type":"exact"}],"termid":"GO:0099620"}


id: GO:0030993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinesin complex found in eukaryotic axonemes that contains two distinct plus end-directed kinesin motor proteins and at least one accessory subunit, and that functions in the anterograde transport of molecules (cargo) from the basal body to the distal tip of the axoneme.","definition_xrefs":["GOC:kmv","PMID:14570576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal heterotrimeric kinesin-II complex","termid":"GO:0030993"}


id: PBO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7 pseudogene 2","termid":"PBO:0051763"}


id: PBO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 2","termid":"PBO:0047639"}


id: PBO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.21","termid":"PBO:0001204"}


id: FYPO:0001758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased protein phosphatase activity","synonyms":[{"name":"increased phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001758"}


id: PBO:0081747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 677","termid":"PBO:0081747"}


id: PBO:0049076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 107","termid":"PBO:0049076"}


id: MONDO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinosarcoma (obsolete MONDO:0002161)","termid":"MONDO:0002161","xrefs":{"Monarch":{"xref_id":"0002161"}}}


id: GO:0102055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + a 12-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + a 12-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102055)","termid":"GO:0102055"}


id: PBO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: MONDO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor/hemangiopericytoma that arises from the meninges.","definition_xrefs":["NCIT:C4660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"meninges hemangiopericytoma","secondary_identifiers":["DOID:4957","SCTID:277522009","MEDGEN:83894","ONCOTREE:HPCCNS","UMLS:C0349622"],"synonyms":[{"name":"hemangiopericytoma of meninges","type":"exact"},{"name":"hemangiopericytoma of the central nervous system","type":"related"},{"name":"hemangiopericytoma of the meninges","type":"exact"},{"name":"meningeal cluster hemangiopericytoma","type":"exact"},{"name":"meningeal cluster spindle cell tumor","type":"exact"},{"name":"meningeal cluster spindle cell tumour","type":"exact"},{"name":"meningeal hemangiopericytoma","type":"exact"},{"name":"meningeal solitary fibrous tumor/hemangiopericytoma","type":"exact"},{"name":"meninges hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003223","xrefs":{"Monarch":{"xref_id":"0003223"}}}


id: GO:0009872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mechanism that functions to prevent self-fertilization in flowering plants that is determined by the diploid genotype of the parent plant. In sporophytic incompatibility the pollen does not germinate, consequently fertilization does not take place.","definition_xrefs":["ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete gametophytic self-incompatibility (obsolete GO:0009872)","synonyms":[{"name":"gametophytic self-incompatibility","type":"exact"}],"termid":"GO:0009872"}


id: GO:0045321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation","secondary_identifiers":["Wikipedia:Immunologic_activation"],"synonyms":[{"name":"immune cell activation","type":"exact"},{"name":"leucocyte activation","type":"exact"}],"termid":"GO:0045321"}


id: PBO:0047802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J2","termid":"PBO:0047802"}


id: PBO:0076258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin","termid":"PBO:0076258"}


id: PBO:0026694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caesium","termid":"PBO:0026694"}


id: PBO:0111649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit Ash2-trithorax family","termid":"PBO:0111649"}


id: PBO:0072918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 1","termid":"PBO:0072918"}


id: FYPO:0001876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased during mitotic anaphase, and the protein is instead symmetrically localized to both SPBs.","definition_xrefs":["PMID:22119525","PMID:22419817","PMID:24920823","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies during anaphase","synonyms":[{"name":"abnormally symmetric protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to mitotic spindle pole bodies during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to spindle pole bodies during mitotic anaphase","type":"exact"},{"name":"abolished asymmetric protein localization to old or new mitotic SPB","type":"related"},{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body during anaphase, with protein symmetrically localised to both spindle pole bodies","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies, during vegetative growth","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"}],"termid":"FYPO:0001876"}


id: MONDO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reticular dystrophy of retinal pigment epithelium (obsolete MONDO:0008370)","termid":"MONDO:0008370","xrefs":{"Monarch":{"xref_id":"0008370"}}}


id: PBO:0018072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily protein","termid":"PBO:0018072"}


id: PBO:0054612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2017","termid":"PBO:0054612"}


id: GO:0052379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent to which it enters into a second organism via the phagocytotic processes of the other organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of entry into other organism via phagocytosis involved in symbiotic interaction (obsolete GO:0052379)","synonyms":[{"name":"modulation by organism of entry into other organism via other organism phagocytosis during symbiotic interaction","type":"related"},{"name":"modulation by organism of entry into other organism via phagocytosis during symbiotic interaction","type":"related"}],"termid":"GO:0052379"}


id: FYPO:0001433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of decamethylenediguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to decamethylenediguanidine","synonyms":[{"name":"resistance to Anticoman","type":"exact"},{"name":"resistance to decamethylenediguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to decamethylenediguanidine during vegetative growth","type":"exact"},{"name":"resistant to decamethylenediguanidine","type":"exact"}],"termid":"FYPO:0001433"}


id: GO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllide a, a chlorophyll lacking the terpenoid side chain, which is the functional parent of chlorophyll a.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"chlorophyllide metabolic process","termid":"GO:0052643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"chlorophyllide a metabolic process","synonyms":[{"name":"chlorophyllide a metabolism","type":"exact"}],"termid":"GO:0052644"}


id: GO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-glucose 1-phosphate = D-glucose + D-glucose 1,6-bisphosphate.","definition_xrefs":["MetaCyc:GLUCOSE-1-PHOSPHATE-PHOSPHODISMUTASE-RXN","EC:2.7.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"glucose-1-phosphate phosphodismutase activity","secondary_identifiers":["RHEA:16397"],"synonyms":[{"name":"D-glucose-1-phosphate:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose 1-phosphate transphosphorylase activity","type":"related"},{"name":"phosphodismutase activity","type":"related"}],"termid":"GO:0047937"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: GO:0052695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular glucuronidation (obsolete GO:0052695)","secondary_identifiers":["Reactome:R-HSA-156588"],"synonyms":[{"name":"cellular glucuronide biosynthesis","type":"exact"},{"name":"cellular glucuronide biosynthetic process","type":"exact"},{"name":"cellular glucuronoside biosynthesis","type":"exact"},{"name":"cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052695"}


id: GO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"positively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aplanospore formation","termid":"GO:0075291"}


id: GO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall cellulose (obsolete GO:0052355)","termid":"GO:0052355"}


id: MONDO:1011068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Silvery lutung.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Silvery lutung","secondary_identifiers":["OMIA:001033-122765"],"termid":"MONDO:1011068","xrefs":{"Monarch":{"xref_id":"1011068"}}}


id: FYECO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) allele grows, usually at a normal or nearly normal rate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permissive temperature","termid":"FYECO:0000227"}


id: GO:0019033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral tegument","secondary_identifiers":["Wikipedia:Viral_tegument"],"termid":"GO:0019033"}


id: GO:0008062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The timing of the emergence of the adult fly from its pupal case, which usually occurs at dawn.","definition_xrefs":["PMID:11715043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eclosion rhythm","termid":"GO:0008062"}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: GO:0050002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminopentanoate + [PrdC protein]-Se-L-selenocysteinyl-S-L-cysteine = [PrdC protein]-L-selenocysteine/L-cysteine + D-proline.","definition_xrefs":["EC:1.21.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-proline reductase activity","secondary_identifiers":["RHEA:12737","MetaCyc:1.21.4.1-RXN"],"synonyms":[{"name":"5-aminopentanoate:[PrdC protein] oxidoreductase (cyclizing) activity","type":"related"},{"name":"D-proline reductase (dithiol) activity","type":"related"}],"termid":"GO:0050002"}


id: MOD:02003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-serine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-acylated L-serine","termid":"MOD:02003"}


id: GO:0032021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of five proteins, designated NELF-A, -B, -C, -D, and -E in human, that can physically associate with RNP polymerase II to induce transcriptional pausing.","definition_xrefs":["PMID:12612062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"NELF complex","synonyms":[{"name":"negative elongation factor complex","type":"exact"}],"termid":"GO:0032021"}


id: PBO:0058175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4470","termid":"PBO:0058175"}


id: PBO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 3","termid":"PBO:0050035"}


id: PBO:0038524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 4","termid":"PBO:0038524"}


id: FYPO:0003572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:18761674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003572"}


id: PBO:0057629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1204","termid":"PBO:0057629"}


id: GO:0031932
data:
  {"annotated_genes":["SJAG_03067","SJAG_01020","SJAG_00117","SJAG_04460","SJAG_01320","SJAG_04987"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72489,76994,77370,78893,99379,108588],"is_not":false,"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.","definition_xrefs":["GOC:jh","PMID:16469695","GOC:bf","PMID:21548787","PMID:15780592","PMID:14736892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TORC2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 2","type":"exact"},{"name":"TORC 2 complex","type":"exact"},{"name":"TORC2","type":"exact"},{"name":"mTORC2","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex","type":"exact"}],"termid":"GO:0031932","terms_by_termid":{"GO:0031932":null}}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PBO:0087709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in glucose repression","termid":"PBO:0087709"}


id: GO:0031233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that penetrate the external side of the plasma membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of external side of plasma membrane (obsolete GO:0031233)","synonyms":[{"name":"intrinsic to external leaflet of plasma membrane","type":"exact"},{"name":"intrinsic to external side of plasma membrane","type":"narrow"}],"termid":"GO:0031233"}


id: PBO:0051297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-32 (pseudogene)","termid":"PBO:0051297"}


id: GO:0075162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075162)","synonyms":[{"name":"regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075162"}


id: PBO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on recruitment to the spindle pole body","termid":"PBO:0001386"}


id: PBO:0064924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP5 tetratricopeptide repeat domain containing 1, pseudogene","termid":"PBO:0064924"}


id: PBO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C11","termid":"PBO:0050511"}


id: GO:0070182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA polymerase.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"DNA polymerase binding","termid":"GO:0070182"}


id: GO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of hydrogen which results from the dissociation by light of water into molecular hydrogen and oxygen. This process is observed in cyanobacteria and microalgae.","definition_xrefs":["PMID:20692761","GOC:mengo_curators","PMID:20395274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen generation via biophotolysis","synonyms":[{"name":"hydrogen biosynthesis via biophotolysis","type":"exact"}],"termid":"GO:0044817"}


id: GO:0034598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the phosphate group from phosphothreonine by cleavage of the C-OP bond with the concomitant abstraction of the alpha proton, generating a double bond-containing product.","definition_xrefs":["PMID:18084305","PMID:17303758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphothreonine lyase activity","termid":"GO:0034598"}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: GO:0014018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuroblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuroblast fate commitment","termid":"GO:0014017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate specification","termid":"GO:0014018"}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: GO:0032741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"positively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-18 production","secondary_identifiers":["GO:0150122","GO:0045383"],"synonyms":[{"name":"activation of interleukin-18 production","type":"narrow"},{"name":"positive regulation of IL-18 production","type":"exact"},{"name":"positive regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-18 secretion","type":"narrow"},{"name":"stimulation of interleukin-18 production","type":"narrow"},{"name":"up regulation of interleukin-18 production","type":"exact"},{"name":"up-regulation of interleukin-18 production","type":"exact"},{"name":"upregulation of interleukin-18 production","type":"exact"}],"termid":"GO:0032741"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: PBO:0084620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p","termid":"PBO:0084620"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: PR:000028940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor oxidized form in Schizosaccharomyces pombe. This form is produced under oxidative stress.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pap1/Ox+","pombase_gene_id":"SPAC1783.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: AP-1-like transcription factor oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pap1/Ox+","type":"exact"},{"name":"pap1/Ox+","type":"exact"}],"termid":"PR:000028940"}


id: GO:0003914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrimidine-pyrimidone (6-4) photoproduct (in DNA) = 2 pyrimidine residues (in DNA). Catalyzes the reactivation of ultraviolet-irradiated DNA.","definition_xrefs":["GOC:mah","PMID:11124949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA photolyase activity","termid":"GO:0003913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA (6-4) photolyase activity","secondary_identifiers":["EC:4.1.99.13","MetaCyc:RXN-10771"],"termid":"GO:0003914"}


id: PBO:0056503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 5","termid":"PBO:0056503"}


id: FYPO:0004203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased calcium import","synonyms":[{"name":"increased calcium import during mitotic cell cycle","type":"related"},{"name":"increased calcium import during vegetative growth","type":"exact"},{"name":"increased calcium import into cell","type":"exact"},{"name":"increased calcium ion import","type":"exact"},{"name":"increased calcium ion import across plasma membrane","type":"exact"},{"name":"increased calcium uptake","type":"exact"},{"name":"increased calcium uptake into intracellular compartments","type":"related"},{"name":"increased cellular calcium import","type":"exact"}],"termid":"FYPO:0004203"}


id: MONDO:0012927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"1q41q42 microdeletion syndrome is a chromosomal anomaly characterized by a severe developmental delay and/or intellectual disability, typical facial dysmorphic features, brain anomalies, seizures, cleft palate, clubfeet, nail hypoplasia and congenital heart disease.","definition_xrefs":["Orphanet:250999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"},{"relation_name":"is_a","term_name":"chromosome 1q deletion","termid":"MONDO:0022756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 1q41-q42 deletion syndrome","secondary_identifiers":["OMIM:612530","DOID:0060412","GARD:3738","MEDGEN:382704","SCTID:716515000","UMLS:C2675857"],"synonyms":[{"name":"1q41-q42 deletion syndrome","type":"related"},{"name":"1q41-q42 microdeletion syndrome","type":"exact"},{"name":"1q41q42 microdeletion syndrome","type":"exact"},{"name":"Del(1)(q41q42)","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome, isolated cases","type":"exact"},{"name":"deletion 1q41-q42","type":"related"},{"name":"holoprosencephaly 10","type":"related"},{"name":"monosomy 1q41-q42","type":"exact"},{"name":"monosomy 1q41q42","type":"exact"}],"termid":"MONDO:0012927","xrefs":{"Monarch":{"xref_id":"0012927"}}}


id: GO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:18421706","GOC:ai","PMID:15176085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ocellus pigment catabolic process","synonyms":[{"name":"ocellus pigment breakdown","type":"exact"},{"name":"ocellus pigment catabolism","type":"exact"},{"name":"ocellus pigment degradation","type":"exact"}],"termid":"GO:0046159"}


id: MONDO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma of the mucosa","secondary_identifiers":["GARD:20110","MEDGEN:1676191","Orphanet:168999","UMLS:C5191057"],"synonyms":[{"name":"melanoma (disease) of mucosa","type":"exact"},{"name":"mucosa melanoma","type":"exact"},{"name":"mucosa melanoma (disease)","type":"exact"}],"termid":"MONDO:0015694","xrefs":{"Monarch":{"xref_id":"0015694"}}}


id: PBO:0029988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation","termid":"PBO:0029988"}


id: GO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte development","synonyms":[{"name":"astrocyte cell development","type":"exact"}],"termid":"GO:0014002"}


id: GO:0032831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032829"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"positive regulation of regulatory T cell differentiation","termid":"GO:0045591"},{"relation_name":"positively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"activation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"up regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"up-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"upregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"}],"termid":"GO:0032831"}


id: GO:0032875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"regulation of DNA endoreduplication","synonyms":[{"name":"regulation of DNA endoreplication","type":"exact"},{"name":"regulation of DNA re-duplication","type":"exact"}],"termid":"GO:0032875"}


id: PBO:0074758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 117","termid":"PBO:0074758"}


id: PBO:0042401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 7","termid":"PBO:0042401"}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: MONDO:0029146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saul-Wilson syndrome (obsolete MONDO:0029146)","termid":"MONDO:0029146","xrefs":{"Monarch":{"xref_id":"0029146"}}}


id: GO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"regulation of CCL5 production","type":"exact"},{"name":"regulation of RANTES production","type":"exact"},{"name":"regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071649"}


id: MONDO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the peritoneum and is characterized by the presence of gland like structures. Cytologic atypia is absent.","definition_xrefs":["NCIT:C7354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"peritoneal mesothelioma","termid":"MONDO:0006362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal mesothelioma","secondary_identifiers":["DOID:1789","MEDGEN:87540","UMLS:C0346113"],"synonyms":[{"name":"mesothelioma of peritoneum","type":"broad"},{"name":"peritoneal adenomatoid tumor","type":"exact"},{"name":"peritoneal adenomatoid tumour","type":"exact"},{"name":"peritoneum benign mesothelioma","type":"exact"}],"termid":"MONDO:0002112","xrefs":{"Monarch":{"xref_id":"0002112"}}}


id: GO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}


id: GO:0035199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific avoidance actions or reactions of an organism in response to the perception of salt.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salt aversion","synonyms":[{"name":"behavioral response to salt","type":"broad"}],"termid":"GO:0035199"}


id: PBO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D4","termid":"PBO:0072552"}


id: PBO:0091700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase","termid":"PBO:0091700"}


id: FYPO:0005922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly occurs to a lower extent than normal in subtelomeric regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507","PMID:21437270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased heterochromatin assembly at subtelomere","synonyms":[{"name":"decreased heterochromatin assembly at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly at subtelomere during vegetative growth","type":"exact"},{"name":"decreased heterochromatin formation at subtelomere","type":"exact"},{"name":"decreased subtelomeric heterochromatin assembly","type":"exact"},{"name":"reduced heterochromatin assembly at subtelomere","type":"exact"}],"termid":"FYPO:0005922"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: GO:0010249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxin conjugates, a bound form of auxin.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin conjugate metabolic process","synonyms":[{"name":"auxin conjugate metabolism","type":"exact"}],"termid":"GO:0010249"}


id: PBO:0067702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 10","termid":"PBO:0067702"}


id: PBO:0063593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 6","termid":"PBO:0063593"}


id: PBO:0070261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 6, pseudogene","termid":"PBO:0070261"}


id: PBO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor","termid":"PBO:0017045"}


id: PBO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 36","termid":"PBO:0050126"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: GO:0032075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclease activity","synonyms":[{"name":"activation of nuclease activity","type":"narrow"},{"name":"nuclease activator","type":"related"},{"name":"stimulation of nuclease activity","type":"narrow"},{"name":"up regulation of nuclease activity","type":"exact"},{"name":"up-regulation of nuclease activity","type":"exact"},{"name":"upregulation of nuclease activity","type":"exact"}],"termid":"GO:0032075"}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: PBO:0065315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 38","termid":"PBO:0065315"}


id: PBO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob1","termid":"PBO:0004051"}


id: _global:enables_subfunction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables_subfunction","secondary_identifiers":["RO:0004031"],"termid":"_global:enables_subfunction"}


id: PBO:0062283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 7 pseudogene","termid":"PBO:0062283"}


id: PBO:0072018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 5","termid":"PBO:0072018"}


id: MONDO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinetic cerebral palsy (obsolete MONDO:0000399)","termid":"MONDO:0000399","xrefs":{"Monarch":{"xref_id":"0000399"}}}


id: GO:0106128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:23447642","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"negatively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of store-operated calcium entry","termid":"GO:0106128"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: GO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to its commitment to an association neuron fate.","definition_xrefs":["GOC:dgh","PMID:12593981","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:0021777)","synonyms":[{"name":"BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:0021777"}


id: PBO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_MCM_complex_assembly","termid":"PBO:0030343"}


id: SO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recognition site is bipartite and interrupted.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000284 type_I_enzyme_restriction_site (obsolete SO:0000284)","termid":"SO:0000284"}


id: FYPO:0004285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mitomycin C.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mitomycin C","synonyms":[{"name":"normal cell population growth in presence of mitomycin C","type":"exact"},{"name":"normal cell population growth on mitomycin C","type":"exact"},{"name":"normal vegetative cell population growth on mitomycin C","type":"exact"}],"termid":"FYPO:0004285"}


id: MONDO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the median nerve, from its origin at the brachial plexus to its termination in the hand. Clinical features include weakness of wrist and finger flexion, forearm pronation, thenar abduction, and loss of sensation over the lateral palm, first three fingers, and radial half of the ring finger. Common sites of injury include the elbow, where the nerve passes through the two heads of the pronator teres muscle (pronator syndrome) and in the carpal tunnel (carpal tunnel syndrome).","definition_xrefs":["MESH:D020423"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"median nerve neuropathy","secondary_identifiers":["UMLS:C0751922","DOID:571","SCTID:397828008","ICD9:354.1","MEDGEN:199766"],"synonyms":[{"name":"median nerve palsy","type":"related"},{"name":"median nerve peripheral neuropathy","type":"exact"},{"name":"median neuropathy","type":"exact"},{"name":"peripheral neuropathy of median nerve","type":"exact"}],"termid":"MONDO:0003598","xrefs":{"Monarch":{"xref_id":"0003598"}}}


id: MONDO:0009911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin deficiency, isolated","secondary_identifiers":["OMIM:264110","UMLS:C0271586","MEDGEN:75758","MESH:C562708","ICD9:253.4","SCTID:67873006"],"synonyms":[{"name":"prolactin deficiency, isolated","type":"exact"}],"termid":"MONDO:0009911","xrefs":{"Monarch":{"xref_id":"0009911"}}}


id: FYPO:0008004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a site of mechanical stress on the cell surface where it is normally found.","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to site of mechanical stress","termid":"FYPO:0008004"}


id: MONDO:1011423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 6 deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 6 deficiency, non-human animal","secondary_identifiers":["OMIA:001624"],"synonyms":[{"name":"C6 deficiency","type":"exact"}],"termid":"MONDO:1011423","xrefs":{"Monarch":{"xref_id":"1011423"}}}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: GO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose catabolic process","termid":"GO:0019317"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-fucose catabolic process","synonyms":[{"name":"L-fucose breakdown","type":"exact"},{"name":"L-fucose catabolism","type":"exact"},{"name":"L-fucose degradation","type":"exact"}],"termid":"GO:0042355"}


id: PBO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug68","termid":"PBO:0016933"}


id: PBO:0058331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4705","termid":"PBO:0058331"}


id: GO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete virulence (obsolete GO:0009406)","synonyms":[{"name":"virulence","type":"exact"}],"termid":"GO:0009406"}


id: MONDO:0018572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe intellectual disability-hypotonia-strabismus-coarse face-planovalgus syndrome","secondary_identifiers":["MEDGEN:1808836","UMLS:C5681179","Orphanet:436141","GARD:21817"],"termid":"MONDO:0018572","xrefs":{"Monarch":{"xref_id":"0018572"}}}


id: GO:0110144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a magnetosome, a membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria.","definition_xrefs":["GOC:aa","PMID:27620945"],"gene_count":0,"genotype_count":0,"name":"obsolete magnetosome part (obsolete GO:0110144)","termid":"GO:0110144"}


id: PBO:0052443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF2 divergent transcript","termid":"PBO:0052443"}


id: GO:0060391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of SMAD protein signal transduction","synonyms":[{"name":"positive regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"positive regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060391"}


id: PBO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral sphingomyelinase activation associated factor","termid":"PBO:0061528"}


id: PBO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-28","termid":"PBO:0051201"}


id: GO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-methyl-2-oxopentanoate + H+ = 2-methylbutanal + CO2.","definition_xrefs":["RHEA:21108","EC:4.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"branched-chain-2-oxoacid decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03894","MetaCyc:4.1.1.72-RXN"],"synonyms":[{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase (2-methylbutanal-forming)","type":"related"},{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase activity","type":"related"},{"name":"BCKA","type":"related"},{"name":"branched-chain alpha-keto acid decarboxylase activity","type":"related"},{"name":"branched-chain keto acid decarboxylase activity","type":"related"},{"name":"branched-chain oxo acid decarboxylase activity","type":"related"}],"termid":"GO:0047433"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: GO:1903088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 5-amino-1-ribofuranosylimidazole-4-carboxamide is transported across a membrane.","definition_xrefs":["PMID:24778186","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"5-amino-1-ribofuranosylimidazole-4-carboxamide transmembrane transport","termid":"GO:1903088"}


id: PBO:0027411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin_peroxidase_activity","termid":"PBO:0027411"}


id: GO:1903367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fear response.","definition_xrefs":["PMID:8677262","GOC:TermGenie","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"positively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fear response","synonyms":[{"name":"activation of fear response","type":"narrow"},{"name":"activation of physiological fear response","type":"narrow"},{"name":"positive regulation of physiological fear response","type":"exact"},{"name":"up regulation of fear response","type":"exact"},{"name":"up regulation of physiological fear response","type":"exact"},{"name":"up-regulation of fear response","type":"exact"},{"name":"up-regulation of physiological fear response","type":"exact"},{"name":"upregulation of fear response","type":"exact"},{"name":"upregulation of physiological fear response","type":"exact"}],"termid":"GO:1903367"}


id: MONDO:0015733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Low anorectal malformation is a rare, genetic, non-syndromic subtype of anorectal malformation, resulting from a developmental defect during embryogenesis, characterized by a wide spectrum of anorectal anomalies lying below the ischial tuberosity (e.g., anovestibular fistula in female, perineal and anocutaneous fistulas, and anal stenosis). Patients may present with failure to pass meconium, failure to thrive, and chronic constipation.","definition_xrefs":["Orphanet:171215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low anorectal malformation","secondary_identifiers":["MEDGEN:473082","NCIT:C98975","SCTID:253772005","ICD9:751.5","UMLS:C0345218","icd11.foundation:1155202227"],"termid":"MONDO:0015733","xrefs":{"Monarch":{"xref_id":"0015733"}}}


id: PBO:0043696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 2","termid":"PBO:0043696"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: MONDO:0012054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 1p36.2.","definition_xrefs":["DOID:0070088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 12","secondary_identifiers":["OMIM:608543","UMLS:C1837893","MEDGEN:373838"],"synonyms":[{"name":"SCZD12","type":"exact"},{"name":"Sczd12","type":"related"},{"name":"schizophrenia 12","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 1P-related","type":"related"},{"name":"schizophrenia type 12","type":"exact"}],"termid":"MONDO:0012054","xrefs":{"Monarch":{"xref_id":"0012054"}}}


id: MOD:01846
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, and a copper atom to the methanobactin OB3b copper complex.","definition_xrefs":["PubMed:18729522","RESID:AA0552","PubMed:21254756","PubMed:20961038","PubMed:15361623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"methanobactin OB3b copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin OB3b complex]","type":"exact"},{"name":"bis[4-(hydroxy[sulfanyl-kappaS]methylidene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin OB3b copper complex","type":"exact"}],"termid":"MOD:01846"}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: PBO:0073037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCUBE1 antisense RNA 1","termid":"PBO:0073037"}


id: FYPO:0001473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal when the cells are subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to tacrolimus","termid":"FYPO:0001379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tacrolimus during salt stress","synonyms":[{"name":"resistance to FK506 during salt stress","type":"exact"},{"name":"resistance to salt stress and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and salt stress","type":"exact"},{"name":"resistance to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during salt stress during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus during salt stress","type":"exact"}],"termid":"FYPO:0001473"}


id: GO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["PMID:20065073","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of terminal mannose on C branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8C","type":"related"},{"name":"glycoprotein mannose trimming on C branch","type":"exact"}],"termid":"GO:0036510"}


id: GO:0150011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:17114044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection arborization","synonyms":[{"name":"regulation of neurite arborization","type":"exact"},{"name":"regulation of neurite branching","type":"exact"},{"name":"regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150011"}


id: MONDO:0009778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy II, autosomal recessive","secondary_identifiers":["MEDGEN:376758","UMLS:C1850319","OMIM:258300","MESH:C564930"],"synonyms":[{"name":"OPCA II, Fickler-Winkler type","type":"related"},{"name":"olivopontocerebellar atrophy II, autosomal recessive","type":"exact"}],"termid":"MONDO:0009778","xrefs":{"Monarch":{"xref_id":"0009778"}}}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_00516","SJAG_01447","SJAG_02782","SJAG_04955","SJAG_02023","SJAG_01397","SJAG_01471","SJAG_00136","SJAG_03406","SJAG_00212","SJAG_05294","SJAG_01913","SJAG_01817","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58207,60537,60636,61144,61271,61827,62569,64542,65333,67673,70999,78351,78458,79673],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: MONDO:0020757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by an aura that includes motor weakness and the absence of family history.","definition_xrefs":["NCIT:C117011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial or sporadic hemiplegic migraine","termid":"MONDO:0018925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hemiplegic migraine","secondary_identifiers":["UMLS:C1832903","icd11.foundation:1303340532","MEDGEN:318737"],"synonyms":[{"name":"sporadic hemiplegic migraine","type":"exact"}],"termid":"MONDO:0020757","xrefs":{"Monarch":{"xref_id":"0020757"}}}


id: MONDO:0009187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Celiac disease, epilepsy and cerebral calcification syndrome (CEC) is a rare disorder characterized by the combination of auto-immune intestinal disease, epileptic seizures and cerebral calcifications.","definition_xrefs":["Orphanet:1459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"antibody mediated epilepsy","termid":"MONDO:0100029"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease-epilepsy-cerebral calcification syndrome","secondary_identifiers":["MEDGEN:341654","OMIM:226810","GARD:2166","MESH:C535496","UMLS:C1856930"],"synonyms":[{"name":"CEC","type":"exact"},{"name":"bilateral occipital calcifications with epilepsy","type":"related"},{"name":"celiac disease epilepsy occipital calcifications","type":"related"},{"name":"celiac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"coeliac disease epilepsy occipital calcifications","type":"related"},{"name":"coeliac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"epilepsy occipital calcifications","type":"related"},{"name":"epilepsy with bilateral occipital calcifications","type":"related"},{"name":"familial unilateral and bilateral occipital calcifications and epilepsy","type":"related"}],"termid":"MONDO:0009187","xrefs":{"Monarch":{"xref_id":"0009187"}}}


id: PBO:0075793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11 pseudogene 1","termid":"PBO:0075793"}


id: GO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-acetamidobutanoyl-CoA + H2O = 4-aminobutanoyl-CoA + acetate.","definition_xrefs":["RHEA:22928","EC:3.5.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0019213","GO:0003674"],"is_obsolete":false,"name":"4-acetamidobutyryl-CoA deacetylase activity","secondary_identifiers":["MetaCyc:4-ACETAMIDOBUTYRYL-COA-DEACETYLASE-RXN","KEGG_REACTION:R04056"],"synonyms":[{"name":"4-acetamidobutanoyl-CoA amidohydrolase activity","type":"related"},{"name":"aminobutyryl-CoA thiolesterase activity","type":"related"},{"name":"deacetylase-thiolesterase activity","type":"related"}],"termid":"GO:0047574"}


id: PBO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt2","termid":"PBO:0005726"}


id: GO:0036427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + GDP-alpha-D-mannose = D-mannosyl undecaprenyl phosphate + GDP.","definition_xrefs":["RHEA:28118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0047267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"all-trans-undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0036427"}


id: MONDO:0010852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8Q12.1-q21.2 deletion syndrome","secondary_identifiers":["UMLS:C1838346","MEDGEN:333071","MESH:C536574","OMIM:600257"],"synonyms":[{"name":"Branchio-Oto-renal Duane hydrocephalus contiguous gene syndrome","type":"related"},{"name":"bor-Duane hydrocephalus contiguous Gene syndrome","type":"related"},{"name":"chromosome 8Q12.1-q21.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0010852","xrefs":{"Monarch":{"xref_id":"0010852"}}}


id: MONDO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of nodules in the isthmus of the fallopian tube due to fallopian tube diverticulosis. It may cause infertility or ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis isthmica nodosa","secondary_identifiers":["SCTID:36742000","UMLS:C0269043","icd11.foundation:1586025352","MEDGEN:82840","NCIT:C40119","DOID:5730"],"termid":"MONDO:0003616","xrefs":{"Monarch":{"xref_id":"0003616"}}}


id: PBO:0076389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 2","termid":"PBO:0076389"}


id: PBO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 36","termid":"PBO:0070360"}


id: MONDO:0008427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid exchange, frequency of","secondary_identifiers":["UMLS:C1866942","OMIM:182220","MEDGEN:357877"],"synonyms":[{"name":"SCE, frequency of","type":"related"},{"name":"sister chromatid exchange, frequency of","type":"exact"}],"termid":"MONDO:0008427","xrefs":{"Monarch":{"xref_id":"0008427"}}}


id: PR:P0CT40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-9 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.02c","synonyms":[{"name":"Spom972h-Tf2-9","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT40"}


id: PBO:0054327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1720","termid":"PBO:0054327"}


id: MONDO:0022875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortada Koussef Matsumoto syndrome","termid":"MONDO:0022875","xrefs":{"Monarch":{"xref_id":"0022875"}}}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: PBO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1 (predicted)","termid":"PBO:0017560"}


id: GO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"positively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of B cell cytokine production","synonyms":[{"name":"activation of B cell cytokine production","type":"narrow"},{"name":"positive regulation of B lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of B-cell cytokine production","type":"exact"},{"name":"positive regulation of B-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of B cell cytokine production","type":"narrow"},{"name":"up regulation of B cell cytokine production","type":"exact"},{"name":"up-regulation of B cell cytokine production","type":"exact"},{"name":"upregulation of B cell cytokine production","type":"exact"}],"termid":"GO:0002723"}


id: PBO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate rich 1","termid":"PBO:0045476"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["UMLS:C0155209","MEDGEN:509851","ICD9:374.50","SCTID:1112003","DOID:10120"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: PBO:0088356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase","termid":"PBO:0088356"}


id: PBO:0087655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; a nucleosome assembly complex involved in regulation of histone gene transcription; involved in position-dependent gene silencing and nucleosome reassembly; ortholog of human CABIN1 protein","termid":"PBO:0087655"}


id: GO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galacturonate + ATP = 1-phospho-alpha-D-galacturonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.44","RHEA:12965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"galacturonokinase activity","secondary_identifiers":["KEGG_REACTION:R01980","MetaCyc:GALACTURONOKINASE-RXN"],"synonyms":[{"name":"ATP:D-galacturonate 1-phosphotransferase activity","type":"related"},{"name":"galacturonokinase (phosphorylating) D-galacturonic acid kinase activity","type":"related"}],"termid":"GO:0047912"}


id: PBO:0084942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084942"}


id: GO:1904296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GOC:TermGenie","PMID:18279313","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmolarity-sensing cation channel activity (obsolete GO:1904296)","synonyms":[{"name":"down regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"down-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"downregulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"inhibition of osmolarity-sensing cation channel activity","type":"narrow"}],"termid":"GO:1904296"}


id: SO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a 7SK RNA (SO:0002340).","definition_xrefs":["PMID:21853533","PMID:27369380","PMID:19246988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK_gene","synonyms":[{"name":"7SK RNA gene","type":"exact"},{"name":"RNA 7SK gene","type":"exact"}],"termid":"SO:0002341"}


id: PBO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyogamy Meiotic Segregation protein","termid":"PBO:0002064"}


id: GO:0000132
data:
  {"annotated_genes":["SJAG_02695","SJAG_00140","SJAG_02651","SJAG_02737","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76331,96961,104547,104878,116969],"is_not":false,"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"},{"relation_name":"is_a","term_name":"establishment of spindle orientation","termid":"GO:0051294"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0000226","GO:0051179","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030607","GO:0030609"],"synonyms":[{"name":"establishment of spindle orientation during mitosis","type":"related"},{"name":"establishment of spindle orientation involved in mitotic cell cycle","type":"exact"},{"name":"mitotic spindle orientation","type":"exact"},{"name":"orienting of mitotic spindle","type":"exact"}],"termid":"GO:0000132","terms_by_termid":{"GO:0000132":null}}


id: PBO:0057549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 663b","termid":"PBO:0057549"}


id: MONDO:0007617
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85943],"is_not":false,"summary":null,"term":"MONDO:0007617"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538391","DOID:0070042","UMLS:C3281201","OMIM:609943","MEDGEN:482831","OMIM:614562","OMIM:135900","GARD:15072"],"synonyms":[{"name":"ARID1B-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome","type":"related"},{"name":"COFFIN-SIRIS syndrome 1","type":"exact"},{"name":"CSS","type":"related"},{"name":"CSS1","type":"exact"},{"name":"Coffin-Siris syndrome 1","type":"exact"},{"name":"MRD12","type":"exact"},{"name":"autosomal dominant mental retardation 12","type":"exact"},{"name":"fifth digit syndrome","type":"broad"},{"name":"hypertrichosis, hyperkeratosis, intellectual disability, and distinctive facial features","type":"exact"},{"name":"hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features","type":"exact"},{"name":"intellectual disability, autosomal dominant 12","type":"exact"},{"name":"mental retardation, autosomal dominant 12","type":"related"},{"name":"mental retardation, autosomal dominant type 12","type":"exact"}],"termid":"MONDO:0007617","terms_by_termid":{"MONDO:0007617":null},"xrefs":{"Monarch":{"xref_id":"0007617"}}}


id: MONDO:1012679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited rickets that occurs in dogs due to a mutation in the VDR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary vitamin D-resistant rickets, VDR-related, dog","secondary_identifiers":["OMIA:001431-9615"],"synonyms":[{"name":"HVDRR","type":"exact"},{"name":"hereditary 1,25-dihydroxyvitamin D-resistant rickets, dog","type":"related"},{"name":"vitamin D-deficiency rickets, type II, dog","type":"related"}],"termid":"MONDO:1012679","xrefs":{"Monarch":{"xref_id":"1012679"}}}


id: MONDO:0020064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary valve agenesis is a rare congenital heart malformation characterized by a total or partial absence of the pulmonary valve leaflets associated with stenosis of the pulmonary artery orifice and aneurysmal dilatation of the pulmonary arteries. It usually occurs in association with additional cardiovascular malformations such as teralogy of fallot or ventricular septal defect, or can occur as part of a syndrome (e.g. 22q11.2 deletion syndrome). Clinical features depend on the presence of associated cardiac malformations and include pulmonary insufficiency, bronchial obstruction (secondary to compression by aneurysmally dilated pulmonary arteries), pulmonary stenosis, cyanosis, and cardiac failure.3424","definition_xrefs":["Orphanet:982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary valve agenesis","secondary_identifiers":["MEDGEN:576671","NANDO:2100095","SCTID:6996004","GARD:4597","NANDO:2200280","UMLS:C0344983"],"synonyms":[{"name":"PVA","type":"exact"},{"name":"absent pulmonary valve syndrome","type":"exact"},{"name":"congenital absence of the pulmonary valve","type":"exact"},{"name":"pulmonary valves agenesis","type":"related"}],"termid":"MONDO:0020064","xrefs":{"Monarch":{"xref_id":"0020064"}}}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: MONDO:1011313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of development or morphogenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313","xrefs":{"Monarch":{"xref_id":"1011313"}}}


id: PBO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube","termid":"PBO:0031063"}


id: MOD:01804
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a glycosylphosphate through a phosphodiester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycosylphosphorylated residue","termid":"MOD:01804"}


id: PBO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear 3'-tRNA processing endonuclease tRNAse Z, Trz1","termid":"PBO:0015658"}


id: PBO:0061813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 3 Y-linked","termid":"PBO:0061813"}


id: PBO:0087145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the mRNA cleavage and polyadenylation factor; involved in poly(A) site recognition and required for both pre-mRNA cleavage and polyadenylation, 51% sequence similarity with mammalian AAUAA-binding subunit of CPSF","termid":"PBO:0087145"}


id: PBO:0078662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 15-1","termid":"PBO:0078662"}


id: PBO:0070966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 4","termid":"PBO:0070966"}


id: GO:0060445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the salivary gland is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}


id: GO:1903058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome organization.","definition_xrefs":["PMID:24769727","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"positively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome organization","synonyms":[{"name":"activation of melanosome organisation","type":"narrow"},{"name":"activation of melanosome organization","type":"narrow"},{"name":"activation of melanosome organization and biogenesis","type":"related"},{"name":"positive regulation of melanosome organisation","type":"exact"},{"name":"positive regulation of melanosome organization and biogenesis","type":"related"},{"name":"up regulation of melanosome organisation","type":"exact"},{"name":"up regulation of melanosome organization","type":"exact"},{"name":"up regulation of melanosome organization and biogenesis","type":"related"},{"name":"up-regulation of melanosome organisation","type":"exact"},{"name":"up-regulation of melanosome organization","type":"exact"},{"name":"up-regulation of melanosome organization and biogenesis","type":"related"},{"name":"upregulation of melanosome organisation","type":"exact"},{"name":"upregulation of melanosome organization","type":"exact"},{"name":"upregulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903058"}


id: MONDO:0021298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of oropharynx","secondary_identifiers":["UMLS:C0347099","SCTID:92668003","icd11.foundation:364791852","NCIT:C4590","MEDGEN:83852"],"synonyms":[{"name":"carcinoma in situ of oropharynx","type":"exact"},{"name":"carcinoma in situ of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer stage 0","type":"exact"},{"name":"oropharyngeal carcinoma in situ","type":"exact"},{"name":"oropharynx carcinoma in situ","type":"exact"},{"name":"oropharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of oropharynx","type":"exact"},{"name":"stage 0 carcinoma of the oropharynx","type":"exact"},{"name":"stage 0 oropharyngeal cancer","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 oropharyngeal throat cancer","type":"exact"},{"name":"stage 0 oropharynx carcinoma","type":"exact"}],"termid":"MONDO:0021298","xrefs":{"Monarch":{"xref_id":"0021298"}}}


id: MONDO:0006568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kimura disease (obsolete MONDO:0006568)","termid":"MONDO:0006568","xrefs":{"Monarch":{"xref_id":"0006568"}}}


id: PBO:0079181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 10","termid":"PBO:0079181"}


id: PBO:0061445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 6","termid":"PBO:0061445"}


id: PBO:0053458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 411","termid":"PBO:0053458"}


id: GO:0046659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone that takes part in the digestion process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"digestive hormone activity","synonyms":[{"name":"secretin","type":"narrow"}],"termid":"GO:0046659"}


id: GO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), occurring as part of the process of jasmonic acid and ethylene-dependent systemic resistance.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene biosynthetic process","termid":"GO:0009693"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthesis involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"ethylene anabolism during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene biosynthetic process during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene formation during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene synthesis during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0043272"}


id: PATO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: MONDO:0006444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma which is characterized by morphologic transformation to malignancy and an aggressive clinical course. The malignant component most often is sarcomatous or carcinomatous.","definition_xrefs":["NCIT:C4289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma with malignant transformation","secondary_identifiers":["MEDGEN:87256","ONCOTREE:TMT","GARD:10646","UMLS:C0334523","ICDO:9084/3","NANDO:2200107","DOID:0081246","EFO:1000563"],"synonyms":[{"name":"TMT","type":"related"},{"name":"dermoid cyst with malignant transformation","type":"exact"},{"name":"teratoma with malignant transformation","type":"exact"}],"termid":"MONDO:0006444","xrefs":{"Monarch":{"xref_id":"0006444"}}}


id: MONDO:0060556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"joint laxity, short stature, and myopia","secondary_identifiers":["UMLS:C4540020","MEDGEN:1621331","Orphanet:527450","GARD:17963","OMIM:617662"],"synonyms":[{"name":"JLSM","type":"related"},{"name":"joint laxity, short stature, and myopia","type":"exact"}],"termid":"MONDO:0060556","xrefs":{"Monarch":{"xref_id":"0060556"}}}


id: PBO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIStidine requiring","termid":"PBO:0036474"}


id: PBO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.24","termid":"PBO:0015259"}


id: GO:0048205
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71180,117772],"is_not":false,"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:jid","ISBN:0716731363","GOC:mah","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"part_of","term_name":"COPI-coated vesicle budding","termid":"GO:0035964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI coating of Golgi-derived vesicle","type":"exact"},{"name":"COPI vesicle coating","type":"related"}],"termid":"GO:0048205","terms_by_termid":{"GO:0048205":null}}


id: MONDO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Friedreich ataxia (obsolete MONDO:0001573)","termid":"MONDO:0001573","xrefs":{"Monarch":{"xref_id":"0001573"}}}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: GO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue growth","synonyms":[{"name":"down regulation of skeletal muscle growth","type":"exact"},{"name":"down-regulation of skeletal muscle growth","type":"exact"},{"name":"downregulation of skeletal muscle growth","type":"exact"},{"name":"inhibition of skeletal muscle growth","type":"narrow"}],"termid":"GO:0048632"}


id: FYPO:0001483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"},{"relation_name":"is_a","term_name":"normal cellular response to oxidative stress","termid":"FYPO:0001485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to oxidative stress","synonyms":[{"name":"normal alpha,alpha-trehalase activity increase during oxidative stress response","type":"exact"},{"name":"normal increase in trehalase activity in response to oxidative stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to oxidative stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to oxidative stress","type":"broad"}],"termid":"FYPO:0001483"}


id: MONDO:0013946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the HS6ST1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 15 with or without anosmia","secondary_identifiers":["OMIM:614880","DOID:0090075","UMLS:C3553977","GARD:15872","MEDGEN:766891"],"synonyms":[{"name":"HH15","type":"related"},{"name":"HS6ST1 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 15 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in HS6ST1","type":"exact"}],"termid":"MONDO:0013946","xrefs":{"Monarch":{"xref_id":"0013946"}}}


id: PBO:0086225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in mitochondrial copper homeostasis; mitochondrial intermembrane space protein; essential for functional cytochrome oxidase expression; homologous to Cox17p; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0086225"}


id: FYPO:0002036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}


id: MONDO:0019612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Functioning gonadotropic adenoma is a very rare pituitary tumor, macroscopically characterized by a soft, well vascularized, variable sized adenoma, with occasional areas of hemorrage or necrosis, that secretes biologically active gonadotropins. In addition to common neurological signs due to mass effect (headache and/or visual field deterioration), additional clinical manifestations include menstrual irregularities (secondary amenorrhea, oligomenorhea or severe menorrhagia), galactorrhea, infertility or ovarian hyperstimulation syndrome (in premenopausal women), testicular enlargement and, occasionally, hypogonadism (in men) and isosexual precocious puberty (in children).","definition_xrefs":["Orphanet:91348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functioning gonadotropic adenoma","secondary_identifiers":["NCIT:C45915","SCTID:254960002","UMLS:C0346304","GARD:19158","ICD10CM:D35.2","MEDGEN:577353"],"synonyms":[{"name":"functioning pituitary gonadotropic adenoma","type":"exact"},{"name":"gonadotroph adenoma","type":"exact"}],"termid":"MONDO:0019612","xrefs":{"Monarch":{"xref_id":"0019612"}}}


id: GO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, other proteins, and sometimes RNA.","definition_xrefs":["PMID:20404130"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin disassembly (obsolete GO:0031498)","synonyms":[{"name":"chromatin maintenance","type":"broad"}],"termid":"GO:0031498"}


id: MONDO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated ectopia lentis","termid":"MONDO:0015998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis et pupillae","secondary_identifiers":["UMLS:C1644196","OMIM:225200","DOID:0111648","GARD:15164","MEDGEN:301316","MESH:C563268","SCTID:419237004"],"synonyms":[{"name":"ectopia lentis et pupillae","type":"exact"},{"name":"ectopia lentis with ectopia of pupil","type":"related"}],"termid":"MONDO:0009153","xrefs":{"Monarch":{"xref_id":"0009153"}}}


id: PBO:0066176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 2","termid":"PBO:0066176"}


id: GO:0032015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Ran protein signal transduction (obsolete GO:0032015)","termid":"GO:0032015"}


id: PBO:0032699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4_deacetylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0032699"}


id: PBO:0064022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 56","termid":"PBO:0064022"}


id: PBO:0017827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Segregation in Meiosis","termid":"PBO:0017827"}


id: PBO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1 (predicted)","termid":"PBO:0013815"}


id: MONDO:0016232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare venous malformation (obsolete MONDO:0016232)","secondary_identifiers":["Orphanet:211252"],"termid":"MONDO:0016232","xrefs":{"Monarch":{"xref_id":"0016232"}}}


id: GO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoin + H2O = allantoate.","definition_xrefs":["EC:3.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"allantoinase activity","secondary_identifiers":["MetaCyc:ALLANTOINASE-RXN","RHEA:17029"],"synonyms":[{"name":"(S)-allantoin amidohydrolase activity","type":"related"}],"termid":"GO:0004038"}


id: PBO:0060590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK cell activity associated lncRNA 1","termid":"PBO:0060590"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["UniProtKB:O94530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: PBO:0081819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 12, Y-linked","termid":"PBO:0081819"}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: MONDO:1012205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, rabbit","secondary_identifiers":["OMIA:000753-9986"],"termid":"MONDO:1012205","xrefs":{"Monarch":{"xref_id":"1012205"}}}


id: PBO:0085580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5' RNA end processing; substrates include mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p","termid":"PBO:0085580"}


id: PBO:0058666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6794","termid":"PBO:0058666"}


id: GO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"}


id: MONDO:0012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","secondary_identifiers":["MEDGEN:324442","OMIM:609466","MESH:C536427","UMLS:C1836120"],"synonyms":[{"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0012283","xrefs":{"Monarch":{"xref_id":"0012283"}}}


id: GO:2000203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000203"}


id: PBO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H2","termid":"PBO:0050566"}


id: PBO:0056056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumican","termid":"PBO:0056056"}


id: GO:0008664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis the reaction: a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + H2O = a 3'-end 2'-phospho-ribonucleotide-RNA + H+.","definition_xrefs":["RHEA:11828","PMID:25239919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"RNA 2',3'-cyclic 3'-phosphodiesterase activity","secondary_identifiers":["EC:3.1.4.58"],"synonyms":[{"name":"2'-5' RNA ligase activity","type":"narrow"}],"termid":"GO:0008664"}


id: PBO:0089058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein/Nonaspanin-like","termid":"PBO:0089058"}


id: GO:1901350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell-cell signaling that is involved in cell-cell junction organization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in cell-cell junction organization (obsolete GO:1901350)","synonyms":[{"name":"cell-cell signaling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signaling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signaling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signaling involved in intercellular junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signalling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction organization","type":"exact"},{"name":"cell-cell signalling involved in intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:1901350"}


id: PBO:0062611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily T member 2","termid":"PBO:0062611"}


id: PATO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000290 absolute respiratory rate (obsolete PATO:0000290)","termid":"PATO:0000290"}


id: PBO:0043437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNKSR family member 3","termid":"PBO:0043437"}


id: GO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tight junction","secondary_identifiers":["Wikipedia:Tight_junction"],"synonyms":[{"name":"occluding cell junction","type":"exact"},{"name":"occluding junction","type":"exact"}],"termid":"GO:0070160"}


id: PR:Q9P7H4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.05","synonyms":[{"name":"PPIase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa2","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H4"}


id: PBO:0117110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTBDN antisense RNA 1","termid":"PBO:0117110"}


id: PR:Q9P6M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.06c","synonyms":[{"name":"Spom972h-slx4","type":"exact"},{"name":"synthetic lethal of unknown function protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M0"}


id: MONDO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gallbladder adenoma (obsolete MONDO:0000511)","termid":"MONDO:0000511","xrefs":{"Monarch":{"xref_id":"0000511"}}}


id: MONDO:0012332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short stature-delayed bone age due to thyroid hormone metabolism deficiency (obsolete MONDO:0012332)","termid":"MONDO:0012332","xrefs":{"Monarch":{"xref_id":"0012332"}}}


id: FYPO:0005243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on glutamine nitrogen source","synonyms":[{"name":"increased growth on glutamine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0005243"}


id: PBO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8 pseudogene 1","termid":"PBO:0061217"}


id: GO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["GOC:go_curators","MetaCyc:PWY-4321","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process to succinate via succinate semialdehyde (obsolete GO:0019549)","termid":"GO:0019549"}


id: PBO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 30","termid":"PBO:0060010"}


id: GO:0004730
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79606],"is_not":false,"summary":null,"term":"GO:0004730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + uracil = H2O + pseudouridine 5'-phosphate.","definition_xrefs":["RHEA:18337","EC:4.2.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"pseudouridylate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-5398","KEGG_REACTION:R01055"],"synonyms":[{"name":"5-ribosyluracil 5-phosphate synthetase activity","type":"related"},{"name":"pseudouridine monophosphate synthase activity","type":"exact"},{"name":"pseudouridine monophosphate synthetase activity","type":"related"},{"name":"pseudouridine-5'-phosphate glycosidase activity","type":"exact"},{"name":"pseudouridylate synthetase activity","type":"related"},{"name":"pseudouridylic acid synthetase activity","type":"related"},{"name":"psiUMP synthetase activity","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate)","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate; pseudouridine-5'-phosphate-forming)","type":"related"},{"name":"uracil hydrolyase activity","type":"related"}],"termid":"GO:0004730","terms_by_termid":{"GO:0004730":null}}


id: GO:0097368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a structure near the basement membrane in adjacent Sertoli cells of the seminiferous epithelium for maintaining spermatogenesis. The structure consists of tight junctions, basal ectoplasmic specializations, and desmosome-like junctions.","definition_xrefs":["PMID:19509333","Wikipedia:Blood-testis_barrier","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli cell development","termid":"GO:0060009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of Sertoli cell barrier","synonyms":[{"name":"establishment of BTB","type":"exact"},{"name":"establishment of SCB","type":"exact"},{"name":"establishment of blood-testis barrier","type":"exact"}],"termid":"GO:0097368"}


id: MONDO:0014136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pulmonary hypertension in which the cause of the disease is a mutation in the KCNK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 4","secondary_identifiers":["OMIM:615344","UMLS:C3809198","MEDGEN:815528"],"synonyms":[{"name":"KCNK3 primary pulmonary hypertension","type":"exact"},{"name":"PPH4","type":"related"},{"name":"primary pulmonary hypertension caused by mutation in KCNK3","type":"exact"},{"name":"pulmonary hypertension, primary, 4","type":"exact"},{"name":"pulmonary hypertension, primary, type 4","type":"exact"}],"termid":"MONDO:0014136","xrefs":{"Monarch":{"xref_id":"0014136"}}}


id: MONDO:0015890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with congenital hypogonadotropic hypogonadism (obsolete MONDO:0015890)","secondary_identifiers":["Orphanet:181387"],"synonyms":[{"name":"rare disorder with hypogonadotropic hypogonadism","type":"related"},{"name":"rare disorder with secondary hypogonadism","type":"exact"}],"termid":"MONDO:0015890","xrefs":{"Monarch":{"xref_id":"0015890"}}}


id: GO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interferon-gamma (a type II interferon) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","PMID:15546383","GOC:signaling","ISBN:0126896631","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type II interferon receptor activity","synonyms":[{"name":"IFN-gamma receptor activity","type":"exact"},{"name":"IFNG receptor activity","type":"exact"},{"name":"interferon-gamma receptor activity","type":"exact"}],"termid":"GO:0004906"}


id: MONDO:0004994
data:
  {"annotated_genes":["SJAG_02923","SJAG_02431","SJAG_03077","SJAG_04567","SJAG_02131","SJAG_05199","SJAG_01665","SJAG_00993","SJAG_02536","SJAG_01209","SJAG_00930","SJAG_03453","SJAG_03703","SJAG_01139","SJAG_02785","SJAG_00228","SJAG_02919","SJAG_01322","SJAG_04553","SJAG_00547","SJAG_03126","SJAG_02611","SJAG_02229","SJAG_02342","SJAG_01240","SJAG_01754","SJAG_04621","SJAG_01671","SJAG_01181","SJAG_03824","SJAG_MIT15","SJAG_03815","SJAG_MIT13","SJAG_03145","SJAG_MIT03","SJAG_04231","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[85320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[85075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[85054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"},{"annotations":[84989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[84992,84990,84991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[84996,84995,84997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[86234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[86516,86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[86334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[85659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[85846,85845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[86424,86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[85110,85111,85112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[86134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86136,86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[85650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[85192,85193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[85131,85132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[86421,86422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[85305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[85511,85512,85510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[86200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[87221,87222,87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85477,85476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"},{"annotations":[87155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"},{"annotations":[85989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"A disease of the heart muscle or myocardium proper. Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.","definition_xrefs":["NCIT:C34830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00930":null,"SJAG_00993":null,"SJAG_01139":null,"SJAG_01181":null,"SJAG_01209":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01665":null,"SJAG_01671":null,"SJAG_01754":null,"SJAG_02131":null,"SJAG_02229":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02611":null,"SJAG_02785":null,"SJAG_02919":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_03824":null,"SJAG_04231":null,"SJAG_04397":null,"SJAG_04553":null,"SJAG_04567":null,"SJAG_04621":null,"SJAG_05199":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009202","ICD9:425.9","MEDGEN:209232","DOID:0050700","Orphanet:167848","UMLS:C0878544","ICD9:425","SCTID:85898001","ICD9:425.4","MedDRA:10007636","SCTID:57809008","EFO:0000318","ICD10CM:I42","icd11.foundation:282225286"],"synonyms":[{"name":"Cardiomyopathies","type":"exact"},{"name":"cardiomyopathy","type":"exact"}],"termid":"MONDO:0004994","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008409":null,"MONDO:0008647":null,"MONDO:0008685":null,"MONDO:0009026":null,"MONDO:0009290":null,"MONDO:0009867":null,"MONDO:0010788":null,"MONDO:0010946":null,"MONDO:0011451":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012556":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0012808":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014051":null,"MONDO:0014073":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0030300":null,"MONDO:0030330":null,"MONDO:0032592":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:0859358":null,"MONDO:0957545":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0004994"}}}


id: PBO:0043391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene","termid":"PBO:0043391"}


id: PBO:0087858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in adaptation to weak acid stress; activates transcription of TPO2, YRO2, and other genes encoding membrane stress proteins; HAA1 has a paralog, CUP2, that arose from the whole genome duplication; relocalizes from cytoplasm to nucleus upon DNA replication stress","termid":"PBO:0087858"}


id: PBO:0057927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3652","termid":"PBO:0057927"}


id: MONDO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually low grade chondrosarcoma characterized by the presence of tumor cells with clear cytoplasm. It usually arises in the epiphyseal ends of long bones.","definition_xrefs":["NCIT:C6475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell chondrosarcoma","secondary_identifiers":["UMLS:C1266167","MEDGEN:226848","ICDO:9242/3","DOID:5867"],"synonyms":[{"name":"clear cell chondrosarcoma","type":"exact"},{"name":"clear cell chondrosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003684","xrefs":{"Monarch":{"xref_id":"0003684"}}}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


