# terms

id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:18585455","PMID:17944960","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: PBO:0111834
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjN domain","termid":"PBO:0111834"}


id: MONDO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, nasal polyps, and aspirin intolerance","secondary_identifiers":["OMIM:208550","DOID:0111579","UMLS:C1859648","MEDGEN:347198"],"synonyms":[{"name":"Asa triad","type":"related"},{"name":"asthma and nasal polyps","type":"related"},{"name":"asthma, aspirin-induced, susceptibility to","type":"related"},{"name":"asthma, nasal polyps, and aspirin intolerance","type":"exact"}],"termid":"MONDO:0008834","xrefs":{"Monarch":{"xref_id":"0008834"}}}


id: PBO:0089822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Spc24","termid":"PBO:0089822"}


id: PBO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.6","termid":"PBO:0003159"}


id: FYPO:0000324
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119309,119310,119311],"is_not":false,"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the mitotic cell cycle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased duration of mitotic M phase","termid":"FYPO:0000274"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mitotic metaphase/anaphase transition delay","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0004309","FYPO:0000393"],"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle passage through the metaphase-anaphase transition: delayed","type":"related"},{"name":"delayed cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"delayed mitotic anaphase B","type":"narrow"},{"name":"delayed mitotic metaphase/anaphase transition","type":"exact"},{"name":"delayed onset of anaphase B during mitotic cell cycle","type":"narrow"},{"name":"delayed onset of mitotic anaphase","type":"exact"},{"name":"delayed onset of mitotic anaphase B","type":"narrow"},{"name":"delayed onset of mitotic anaphase B during vegetative growth","type":"narrow"},{"name":"increased duration of metaphase during mitosis","type":"related"},{"name":"increased duration of mitotic metaphase","type":"related"},{"name":"metaphase/anaphase transition delay during mitotic cell cycle","type":"exact"},{"name":"mitotic anaphase delay","type":"exact"},{"name":"mitotic cell cycle delay at metaphase/anaphase transition","type":"exact"},{"name":"mitotic metaphase/anaphase transition delay during vegetative growth","type":"exact"},{"name":"transient cell cycle arrest in mitotic metaphase","type":"exact"}],"termid":"FYPO:0000324","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: PBO:0066454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 6, pseudogene","termid":"PBO:0066454"}


id: MONDO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm with eccrine or apocrine differentiation, arising from the sweat glands. It usually presents as a solitary, well circumscribed, firm nodule in the face and upper trunk. It is characterized by the presence of basaloid cells forming nodules in the dermis. Cases of carcinoma arising from long standing spiradenomas have been reported.","definition_xrefs":["NCIT:C4170"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign spiradenoma","secondary_identifiers":["DOID:5444","ICDO:8403/0","ONCOTREE:SPIR","MEDGEN:90768","SCTID:403938001","UMLS:C0334347"],"synonyms":[{"name":"benign eccrine spiradenoma","type":"narrow"},{"name":"eccrine spiradenoma","type":"narrow"},{"name":"eccrine spiradenoma (morphologic abnormality)","type":"narrow"},{"name":"eccrine spiradenoma of skin","type":"narrow"},{"name":"spiradenoma","type":"exact"},{"name":"spiroma/spiradenoma","type":"related"}],"termid":"MONDO:0003448","xrefs":{"Monarch":{"xref_id":"0003448"}}}


id: MONDO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis due to inhibition of lymphoblastic transformation","secondary_identifiers":["UMLS:C1855476","MESH:C565433","OMIM:247430","MEDGEN:344504"],"synonyms":[{"name":"lymphoblastic transformation, inhibition of","type":"exact"}],"termid":"MONDO:0009534","xrefs":{"Monarch":{"xref_id":"0009534"}}}


id: PBO:0091628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091628"}


id: MONDO:0007204
data:
  {"annotated_genes":["SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86666],"is_not":false,"summary":null,"term":"MONDO:0007204"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the P4HB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4317154","MEDGEN:1374755","OMIM:112240"],"synonyms":[{"name":"CLCRP1","type":"related"},{"name":"COLE-CARPENTER syndrome 1","type":"related"},{"name":"Cole-Carpenter syndrome 1","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in P4HB","type":"exact"},{"name":"Cole-Carpenter syndrome type 1","type":"exact"},{"name":"P4HB Cole-Carpenter syndrome","type":"exact"},{"name":"bone fragility with craniosynostosis, ocular proptosis, hydrocephalus, and distinctive Facial features","type":"related"}],"termid":"MONDO:0007204","terms_by_termid":{"MONDO:0007204":null},"xrefs":{"Monarch":{"xref_id":"0007204"}}}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_04076","SJAG_01805","SJAG_01224","SJAG_01775","SJAG_00918","SJAG_02731","SJAG_00794","SJAG_05220","SJAG_02346","SJAG_03683","SJAG_01837","SJAG_03217","SJAG_05266","SJAG_03989","SJAG_02814","SJAG_03437","SJAG_01278","SJAG_01371","SJAG_03327","SJAG_03926","SJAG_00418","SJAG_01211","SJAG_05319","SJAG_03220","SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87822,93799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[116707],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[95533,105493,89703,110375,101342,115952,90947,116943,108903,109908,107520,100523,98625,97896,102441,95284,109159,110332,113250,114118,107839,93780,89098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: GO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zoospore formation","termid":"GO:0075239"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: PBO:0041148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 3","termid":"PBO:0041148"}


id: FYPO:0003652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription initiation from an RNA polymerase III promoter is abnormal.","definition_xrefs":["GO:0006384","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal transcription initiation from RNA polymerase III promoter","synonyms":[{"name":"abnormal transcription initiation from RNA polymerase III promoter during mitotic cell cycle","type":"related"},{"name":"abnormal transcription initiation from RNA polymerase III promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0003652"}


id: PBO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase","termid":"PBO:0004988"}


id: MONDO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Uruguay Faciocardiomusculoskeletal syndrome","secondary_identifiers":["MESH:C564544","OMIM:300280","UMLS:C1846010","MEDGEN:335320","DOID:0112148"],"synonyms":[{"name":"FCMSU","type":"related"},{"name":"Fcms","type":"related"},{"name":"URUGUAY FACIOCARDIOMUSCULOSKELETAL syndrome","type":"related"},{"name":"Uruguay Faciocardiomusculoskeletal syndrome","type":"exact"},{"name":"faciocardiomusculoskeletal syndrome, Uruguay type","type":"related"},{"name":"uruguay faciocardiomusculoskeletal syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0010292","xrefs":{"Monarch":{"xref_id":"0010292"}}}


id: PBO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Mvp1 (predicted)","termid":"PBO:0002062"}


id: FYPO:0005740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heat. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription during cellular response to heat","synonyms":[{"name":"normal global transcription during vegetative growth in response to heat stress","type":"exact"},{"name":"normal transcription during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to heat stress","type":"exact"}],"termid":"FYPO:0005740"}


id: PBO:0029431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029431"}


id: GO:0097271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.","definition_xrefs":["GOC:rb","PMID:22344253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to bud neck","synonyms":[{"name":"protein localisation to bud neck","type":"exact"},{"name":"protein localization to cellular bud neck","type":"exact"}],"termid":"GO:0097271"}


id: PBO:0077051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 2","termid":"PBO:0077051"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116703],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["PMID:18765790","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: PBO:0065559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 like","termid":"PBO:0065559"}


id: SO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000085 gene_by_genome_location (obsolete SO:0000085)","termid":"SO:0000085"}


id: PBO:0079925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB2 ribosome biogenesis homolog","termid":"PBO:0079925"}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: PBO:0041962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 3","termid":"PBO:0041962"}


id: PBO:0042567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1C","termid":"PBO:0042567"}


id: MONDO:0007339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ectodermal dysplasia syndrome characterized by the association of abnormalities of the eyelids, lips, and teeth.","definition_xrefs":["Orphanet:1997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"blepharocheilodontic syndrome","secondary_identifiers":["MESH:C536188","OMIMPS:119580","UMLS:C1861536","DOID:0080344","SCTID:717911008","icd11.foundation:755252042","GARD:2071","MEDGEN:349302"],"synonyms":[{"name":"BCD syndrome","type":"exact"},{"name":"BCDS","type":"related"},{"name":"BCDS1","type":"related"},{"name":"Elsching syndrome","type":"exact"},{"name":"Elschnig syndrome","type":"related"},{"name":"blepharo-cheilo-dontic syndrome","type":"related"},{"name":"blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"exact"},{"name":"blepharocheilodontic syndrome 1","type":"related"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"clefting-ectropion-conical teeth syndrome","type":"exact"},{"name":"ectropion inferior cleft lip and or palate","type":"related"},{"name":"ectropion inferior-cleft lip and or palate syndrome","type":"exact"},{"name":"ectropion inferior-cleft lip and/or palate syndrome","type":"exact"},{"name":"ectropion, inferior, with cleft lip and/or palate","type":"related"},{"name":"lagophthalmia with bilateral cleft lip and palate","type":"related"},{"name":"lagophthalmia-cleft lip and palate syndrome","type":"exact"}],"termid":"MONDO:0007339","xrefs":{"Monarch":{"xref_id":"0007339"}}}


id: MOD:01646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine removal","termid":"MOD:01646"}


id: GO:0009651
data:
  {"annotated_genes":["SJAG_04567","SJAG_03815","SJAG_00661","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79591,110027],"is_not":false,"summary":null,"term":"GO:0009651"},{"annotations":[89467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[100171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"response to ionic osmotic stress","type":"exact"},{"name":"salinity response","type":"exact"}],"termid":"GO:0009651","terms_by_termid":{"GO:0009651":null,"GO:0071472":null,"GO:0071473":null}}


id: PBO:0054597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2000","termid":"PBO:0054597"}


id: PBO:0078887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-4","termid":"PBO:0078887"}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: PBO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member C","termid":"PBO:0047070"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: GO:1903639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11123201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: GO:0030457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK (mating sensu Fungi) (obsolete GO:0030457)","synonyms":[{"name":"activation of MAPKK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030457"}


id: PBO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 1, transcriptional regulator","termid":"PBO:0061697"}


id: GO:0009067
data:
  {"annotated_genes":["SJAG_01574","SJAG_00881","SJAG_02972","SJAG_03306","SJAG_00432","SJAG_02832","SJAG_04098","SJAG_00396","SJAG_00309","SJAG_00502","SJAG_00234","SJAG_02290","SJAG_03671","SJAG_01404","SJAG_04688","SJAG_03312","SJAG_01061","SJAG_03985","SJAG_02388","SJAG_01955","SJAG_01466","SJAG_03152","SJAG_04549","SJAG_04425","SJAG_03881","SJAG_04459","SJAG_00395","SJAG_00107","SJAG_00365","SJAG_02689","SJAG_00830","SJAG_01630","SJAG_00869","SJAG_00714","SJAG_02293","SJAG_04149","SJAG_04042","SJAG_03712","SJAG_03141","SJAG_00419","SJAG_04953","SJAG_03614","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106005,68332,111103,65260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[57635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[111827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[77559,111828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[102166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[103297,90648,103779,108331,111109,110449,113273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[100671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[100002,106618,95537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[78316,79223,77773,76904,58708,80278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[69907,75060,113468,77440,96334,64153,76520,64771,75993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[71747,74449,76214,79021,111985,70677,115810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[115811,110683,106007,77068,111986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00309":null,"SJAG_00365":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00419":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_03985":null,"SJAG_04042":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_04953":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aspartate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aspartate family amino acid anabolism","type":"exact"},{"name":"aspartate family amino acid biosynthesis","type":"exact"},{"name":"aspartate family amino acid formation","type":"exact"},{"name":"aspartate family amino acid synthesis","type":"exact"}],"termid":"GO:0009067","terms_by_termid":{"GO:0006529":null,"GO:0006532":null,"GO:0009086":null,"GO:0009088":null,"GO:0019266":null,"GO:0019280":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1901705":null,"GO:1990355":null}}


id: MONDO:1011809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, non-human animal","secondary_identifiers":["OMIA:000606"],"termid":"MONDO:1011809","xrefs":{"Monarch":{"xref_id":"1011809"}}}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: PBO:0067943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 245","termid":"PBO:0067943"}


id: PBO:0044756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39B pseudogene 2","termid":"PBO:0044756"}


id: GO:0000935
data:
  {"annotated_genes":["SJAG_01196","SJAG_03748","SJAG_01855","SJAG_03704","SJAG_01456","SJAG_00610","SJAG_01787","SJAG_03436","SJAG_03625","SJAG_02022","SJAG_03753","SJAG_04901","SJAG_01453","SJAG_02215","SJAG_05001","SJAG_04322","SJAG_04776","SJAG_00514","SJAG_01171","SJAG_01774","SJAG_02379","SJAG_02916","SJAG_03705","SJAG_01754","SJAG_01718","SJAG_04690","SJAG_00669","SJAG_02166","SJAG_01888","SJAG_02169","SJAG_00442","SJAG_03655","SJAG_04666","SJAG_01799","SJAG_03581","SJAG_03379","SJAG_00652","SJAG_01181","SJAG_05285","SJAG_04668","SJAG_02222","SJAG_00667","SJAG_03453","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70044,71398,87468,87486,88227,88417,89004,89684,90678,90707,90727,90803,92230,92361,92380,93530,93702,94544,95631,96845,97184,99739,100183,100930,101941,101942,102644,102843,103490,104669,106113,106287,107237,110118,110989,111377,113095,114057,114390,116585,117917,117931],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[115842,100145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum which forms as part of the division site and functions in the compartmentalization of a cell into two daughter cells at division. A division septum spans a cell and does not allow exchange of organelles or cytoplasm between compartments.","definition_xrefs":["GOC:clt","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00652":null,"SJAG_00667":null,"SJAG_00669":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01196":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01855":null,"SJAG_01888":null,"SJAG_02022":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02916":null,"SJAG_03379":null,"SJAG_03436":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_04322":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04690":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04901":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"division septum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043187"],"synonyms":[{"name":"cell septum surface","type":"related"},{"name":"complete septum","type":"exact"},{"name":"septum surface","type":"broad"}],"termid":"GO:0000935","terms_by_termid":{"GO:0000935":null,"GO:0000936":null}}


id: MOD:01797
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 1'-phosphohistidine residue to 1'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:20847263","PubMed:17690871","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"1'-phospho-L-histidine","termid":"MOD:00044"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-phosphohistidine immonium ion","synonyms":[{"name":"2-((1-phosphono-1H-imidazol-4-yl)ethaniminium","type":"exact"},{"name":"Ntau-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01797"}


id: PBO:0005649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer delta subunit Ret2 (predicted)","termid":"PBO:0005649"}


id: MONDO:0015235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnodactyly-intellectual disability-dysmorphism syndrome is characterized by moderate intellectual deficit, brachycephaly, typical facies (thin lips and microstomia), ectomorphic habitus with extremely long, thin fingers and toes, and hypoplastic external genitalia. It has been described in three patients.","definition_xrefs":["Orphanet:1130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnodactyly-intellectual disability-dysmorphism syndrome","secondary_identifiers":["MEDGEN:929699","GARD:764","UMLS:C4304030","SCTID:720502000"],"synonyms":[{"name":"De Die-Smulders-Vles-Fryns syndrome","type":"exact"},{"name":"arachnodactyly - intellectual disability - dysmorphism","type":"related"},{"name":"die Smulders Vles Fryns syndrome","type":"exact"}],"termid":"MONDO:0015235","xrefs":{"Monarch":{"xref_id":"0015235"}}}


id: PBO:0062774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 1","termid":"PBO:0062774"}


id: PBO:0091584
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear Elongation and Deformation","termid":"PBO:0091584"}


id: GO:0140202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a polyamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"polyamine import across plasma membrane","termid":"GO:0140202"}


id: GO:0061135
data:
  {"annotated_genes":["SJAG_04633","SJAG_00460","SJAG_04484","SJAG_04398","SJAG_01072","SJAG_04211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78128,74071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"},{"annotations":[103283,116854,66204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[93154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a peptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04211":null,"SJAG_04398":null,"SJAG_04484":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"endopeptidase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061135","terms_by_termid":{"GO:0004866":null,"GO:0004867":null,"GO:0061133":null}}


id: PBO:0056780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member B","termid":"PBO:0056780"}


id: PBO:0087526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle; phosphorylated","termid":"PBO:0087526"}


id: PBO:0061858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 2B","termid":"PBO:0061858"}


id: GO:0061232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric glomerular epithelium over time, from its formation to the mature structure. The mesonephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the mesonephros. The mesonephric glomerular epithelium consists of both parietal and visceral epithelium. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}


id: PBO:0028283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0028283"}


id: GO:0017148
data:
  {"annotated_genes":["SJAG_02592","SJAG_00786","SJAG_00423","SJAG_02638","SJAG_00169","SJAG_04291","SJAG_05000","SJAG_03501","SJAG_02026","SJAG_01942","SJAG_00690","SJAG_03869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95563,118258,114875,99441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[112170,91274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[69789,75129,99335,115640,94337,109686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[75182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[99449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00423":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016478"],"synonyms":[{"name":"down regulation of protein biosynthetic process","type":"exact"},{"name":"down-regulation of protein biosynthetic process","type":"exact"},{"name":"downregulation of protein biosynthetic process","type":"exact"},{"name":"inhibition of protein biosynthetic process","type":"narrow"},{"name":"negative regulation of protein anabolism","type":"exact"},{"name":"negative regulation of protein biosynthesis","type":"exact"},{"name":"negative regulation of protein biosynthetic process","type":"exact"},{"name":"negative regulation of protein formation","type":"exact"},{"name":"negative regulation of protein synthesis","type":"exact"},{"name":"protein biosynthesis inhibitor activity","type":"related"},{"name":"protein biosynthetic process inhibitor activity","type":"related"}],"termid":"GO:0017148","terms_by_termid":{"GO:0141014":null,"GO:1904689":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: MONDO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 5 (obsolete MONDO:0044256)","secondary_identifiers":["OMIM:227240"],"synonyms":[{"name":"SHEP5","type":"related"},{"name":"skin/hair/eye pigmentation 5, Black/nonblack hair","type":"related"},{"name":"skin/hair/eye pigmentation 5, black/nonblack hair","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/light eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 5","type":"related"}],"termid":"MONDO:0044256","xrefs":{"Monarch":{"xref_id":"0044256"}}}


id: GO:0006037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin metabolic process (obsolete GO:0006037)","synonyms":[{"name":"cell wall chitin metabolism","type":"exact"}],"termid":"GO:0006037"}


id: FYPO:0004158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains more than four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"elongated vegetative cell with fragmented septum and more than four nuclei","synonyms":[{"name":"elongated cell with fragmented septum and more than four nuclei during mitotic cell cycle","type":"related"},{"name":"elongated cell with fragmented septum and more than four nuclei during vegetative growth","type":"exact"},{"name":"long vegetative cell with fragmented septum and more than four nuclei","type":"exact"}],"termid":"FYPO:0004158"}


id: GO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of calcium carbonate onto the organic matrix of a shell, such as a mollusc shell.","definition_xrefs":["PMID:15132736","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shell calcification","termid":"GO:0031215"}


id: PBO:0076767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 6","termid":"PBO:0076767"}


id: MONDO:0700031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18 in which the presence of an extra copy of chromosome 18 is present only in some of the cells of the organism.","definition_xrefs":["PMID:27087248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy 18","termid":"MONDO:0018071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 18","termid":"MONDO:0700031","xrefs":{"Monarch":{"xref_id":"0700031"}}}


id: PBO:0039787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquarius intron-binding spliceosomal factor","termid":"PBO:0039787"}


id: GO:0005891
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74328],"is_not":false,"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"voltage-gated calcium channel complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"voltage gated calcium channel complex","type":"exact"},{"name":"voltage-dependent calcium channel complex","type":"exact"},{"name":"voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0005891","terms_by_termid":{"GO:0005891":null}}


id: GO:0150128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["PMID:29778524","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"negatively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-33 production","secondary_identifiers":["GO:0150124","GO:0150131"],"synonyms":[{"name":"negative regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150128"}


id: FYPO:0004677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which purine-specific mismatch base pair DNA N-glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal purine-specific mismatch base pair DNA N-glycosylase activity","termid":"FYPO:0004676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished purine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"purine-specific mismatch base pair DNA N-glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0004677"}


id: PBO:0089385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1","termid":"PBO:0089385"}


id: MONDO:0019953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"mega-cisterna magna","secondary_identifiers":["Orphanet:97252","GARD:19355","UMLS:C1853377","MEDGEN:344031"],"termid":"MONDO:0019953","xrefs":{"Monarch":{"xref_id":"0019953"}}}


id: PBO:0070001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1297, pseudogene","termid":"PBO:0070001"}


id: PBO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght2","termid":"PBO:0004503"}


id: PBO:0116642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF related protein 1","termid":"PBO:0116642"}


id: GO:0140711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22579286","PMID:22510459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"positive regulation of FNI","type":"broad"},{"name":"positive regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140711"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: PBO:0056321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 1","termid":"PBO:0056321"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: MONDO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mixed functioning pituitary adenoma","termid":"MONDO:0017822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomammotropinoma","secondary_identifiers":["NCIT:C45928","ICD10CM:D35.2","MEDGEN:1649254","Orphanet:314769","UMLS:C4755297","GARD:21391"],"synonyms":[{"name":"GH and PRL cosecreting pituitary adenoma","type":"exact"},{"name":"Growth hormone and prolactin cosecreting pituitary adenoma","type":"exact"},{"name":"Somatolactotropinoma","type":"exact"},{"name":"Somatoprolactinoma","type":"exact"}],"termid":"MONDO:0017823","xrefs":{"Monarch":{"xref_id":"0017823"}}}


id: PBO:0114384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite transmembrane transporter Ssu1","termid":"PBO:0114384"}


id: PBO:0059636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 2","termid":"PBO:0059636"}


id: GO:1905075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:18718461","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"positively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tight junction disassembly","synonyms":[{"name":"activation of occluding cell junction disassembly","type":"narrow"},{"name":"activation of occluding junction disassembly","type":"narrow"},{"name":"activation of tight junction disassembly","type":"narrow"},{"name":"positive regulation of occluding cell junction disassembly","type":"exact"},{"name":"positive regulation of occluding junction disassembly","type":"exact"},{"name":"up regulation of occluding cell junction disassembly","type":"exact"},{"name":"up regulation of tight junction disassembly","type":"exact"},{"name":"up-regulation of occluding cell junction disassembly","type":"exact"},{"name":"up-regulation of tight junction disassembly","type":"exact"},{"name":"upregulation of occluding cell junction disassembly","type":"exact"},{"name":"upregulation of tight junction disassembly","type":"exact"}],"termid":"GO:1905075"}


id: GO:1904409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secretory granule organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15039777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secretory granule organization","synonyms":[{"name":"regulation of secretory granule organisation","type":"exact"},{"name":"regulation of secretory granule organization and biogenesis","type":"related"}],"termid":"GO:1904409"}


id: GO:0003884
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80286],"is_not":false,"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-alpha-amino acid + H2O + O2 = a 2-oxocarboxylate + H2O2 + NH4+.","definition_xrefs":["RHEA:21816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-amino-acid oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.4.3.3","Reactome:R-HSA-389821","MetaCyc:D-AMINO-ACID-OXIDASE-RXN"],"synonyms":[{"name":"D-amino-acid:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-amino acid:O2 oxidoreductase activity","type":"related"},{"name":"new yellow enzyme","type":"related"}],"termid":"GO:0003884","terms_by_termid":{"GO:0003884":null}}


id: PBO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis Nip7 (predicted)","termid":"PBO:0016099"}


id: PBO:0004747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf59","termid":"PBO:0004747"}


id: GO:1990006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle first described in dendrites, categorized by smooth membranes, electron-lucent interiors and irregular shapes. Sometimes occurs in clumps. Amorphous vesicles have been found to contain material taken up from the extracellular space, therefore suggesting that they may be part of the endosomal pathway.","definition_xrefs":["PMID:11896161","NIF_Subcellular:sao1531915298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amorphous vesicle","termid":"GO:1990006"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["UniProtKB:Q9P6S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: PBO:0110259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb2","termid":"PBO:0110259"}


id: MONDO:0019096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare pulmonary hypertension.","gene_count":0,"genotype_count":0,"name":"obsolete rare pulmonary hypertension (obsolete MONDO:0019096)","secondary_identifiers":["Orphanet:71198"],"synonyms":[{"name":"rare pulmonary hypertension","type":"exact"}],"termid":"MONDO:0019096","xrefs":{"Monarch":{"xref_id":"0019096"}}}


id: MONDO:0012116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 8 (SCA8) is a subtype of type I autosomal dominant cerebellar ataxia (ADCA type I) characterized by cerebellar ataxia and cognitive dysfunction in almost three quarters of patients and pyramidal and sensory signs in approximately a third of patients.","definition_xrefs":["Orphanet:98760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 8","secondary_identifiers":["GARD:4956","icd11.foundation:1735913595","MEDGEN:332457","SCTID:715753001","OMIM:608768","UMLS:C1837454","DOID:0050959"],"synonyms":[{"name":"SCA8","type":"exact"},{"name":"spinocerebellar ataxia 8","type":"related"},{"name":"spinocerebellar ataxia type 8","type":"exact"}],"termid":"MONDO:0012116","xrefs":{"Monarch":{"xref_id":"0012116"}}}


id: PBO:0083260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species","termid":"PBO:0083260"}


id: GO:0099054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynapse.","definition_xrefs":["GOC:bf","GOC:dos","GOC:PARL","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynapse assembly","synonyms":[{"name":"presynapse biogenesis","type":"exact"},{"name":"presynaptic terminal assembly","type":"exact"}],"termid":"GO:0099054"}


id: PBO:0029660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029660"}


id: PBO:0036541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin, Mdn1","termid":"PBO:0036541"}


id: PBO:0053525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 520","termid":"PBO:0053525"}


id: PBO:0040406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 7","termid":"PBO:0040406"}


id: PBO:0029710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_high_pH","termid":"PBO:0029710"}


id: MONDO:0017167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant epithelial tumor of salivary glands","secondary_identifiers":["GARD:21043","UMLS:C5190832","Orphanet:276145","MEDGEN:1674486"],"synonyms":[{"name":"malignant epithelial tumor of the salivary glands","type":"related"},{"name":"malignant epithelial tumour of the salivary glands","type":"related"}],"termid":"MONDO:0017167","xrefs":{"Monarch":{"xref_id":"0017167"}}}


id: MONDO:0020809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Sertoli cell tumor of the testis or the ovary which remains localized and does not metastasize to another anatomic site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli cell tumor","termid":"MONDO:0002696"},{"relation_name":"is_a","term_name":"sex cord-stromal benign neoplasm","termid":"MONDO:0024988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign sertoli cell tumor","secondary_identifiers":["UMLS:C1879826","MEDGEN:361204","ICDO:8630/0","NCIT:C67012"],"synonyms":[{"name":"Benign Androblastoma","type":"exact"},{"name":"Benign Sertoli Cell Tumor","type":"exact"},{"name":"Benign Sertoli Cell Tumour","type":"exact"},{"name":"SERTOLI CELL TUMOR, BENIGN","type":"exact"}],"termid":"MONDO:0020809","xrefs":{"Monarch":{"xref_id":"0020809"}}}


id: PBO:0031817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_autophagy","termid":"PBO:0031817"}


id: PBO:0054673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2079","termid":"PBO:0054673"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: PBO:0082676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; implicated in osmotic stress response; other complex members are Kae1p, Cgi121p, Pcc1p, and Bud32p","termid":"PBO:0082676"}


id: GO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of GABA reuptake","type":"exact"},{"name":"regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051947"}


id: GO:0022409
data:
  {"annotated_genes":["SJAG_03802","SJAG_01253","SJAG_00910","SJAG_03484","SJAG_04191","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105912,108774,114104,108651,111390,116169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of cell adhesion to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell-cell adhesion","type":"narrow"},{"name":"stimulation of cell-cell adhesion","type":"narrow"},{"name":"up regulation of cell-cell adhesion","type":"exact"},{"name":"up-regulation of cell-cell adhesion","type":"exact"},{"name":"upregulation of cell-cell adhesion","type":"exact"}],"termid":"GO:0022409","terms_by_termid":{"GO:1900735":null}}


id: MONDO:0005736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eastern equine encephalitis (EEE) is an acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that is characterized by the onset of flulike symptoms including fever, chills, weakness, headache, vomiting, abdominal pain with diarrhea, myalgia, leucocytosis, and hematuria, rapidly progressing to diffuse central nervous system (CNS) involvement with confusion, somnolence, or even coma. Seizures, which may progress to status epilepticus and neurologic sequelae, cranial nerve palsies, and photophobia may occur. EEE is associated with a high rate of morbidity and mortality.","definition_xrefs":["Orphanet:83594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eastern equine encephalitis","secondary_identifiers":["DOID:10841","GARD:10821","EFO:0007242","icd11.foundation:682536148","ICD9:062.2","MEDGEN:102258","ICD10CM:A83.2","MedDRA:10014587","MESH:D020242","UMLS:C0153065"],"synonyms":[{"name":"EEE","type":"related"},{"name":"Eastern equine encephalomyelitis","type":"exact"},{"name":"Neuroinvasive Eastern equine encephalitis virus infection","type":"exact"}],"termid":"MONDO:0005736","xrefs":{"Monarch":{"xref_id":"0005736"}}}


id: MONDO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A eustachian tube disorder with a wider eustachian tube which allows a larger bolus of bacteria-laden material from the nasopharynx during an infection to enter the middle ear, causing a more fulminant infection.","definition_xrefs":["DOID:12358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eustachian tube disorder","termid":"MONDO:0004866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patulous eustachian tube","secondary_identifiers":["SCTID:30280005","MEDGEN:509965","ICD10CM:H69.0","UMLS:C0155434","icd11.foundation:1112306780","ICD9:381.7"],"termid":"MONDO:0001508","xrefs":{"Monarch":{"xref_id":"0001508"}}}


id: PBO:0053740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 965","termid":"PBO:0053740"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0061013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nidogen 1","termid":"PBO:0061013"}


id: PBO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbose reductase (predicted)","termid":"PBO:0002020"}


id: GO:0005053
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70614],"is_not":false,"summary":null,"term":"GO:0005053"}]},"cv_name":"molecular_function","definition":"Binding to a type 2 peroxisome targeting signal, a nonapeptide with a broad consensus sequence of (R/K)-(L/V/I)-(XXXXX)-(H/Q)-(L/A/F).","definition_xrefs":["PMID:11687502","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-2 binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PEX7","type":"narrow"},{"name":"PTS2 binding","type":"exact"},{"name":"PTS2 receptor","type":"exact"},{"name":"peroxisomal targeting signal 2 (PTS2) binding","type":"exact"},{"name":"peroxisome targeting signal-2 binding","type":"exact"},{"name":"peroxisome targeting signal-2 receptor","type":"narrow"}],"termid":"GO:0005053","terms_by_termid":{"GO:0005053":null}}


id: PBO:0049269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell associated 1","termid":"PBO:0049269"}


id: PBO:0080331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 95 pseudogene","termid":"PBO:0080331"}


id: FYPO:0007672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate of transcription scales linearly with nuclear size instead of total cell size. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:32059768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"transcription scaling with nuclear size decoupled from cell size","synonyms":[{"name":"abnormal transcription scaling with nuclear size","type":"exact"},{"name":"linear transcription scaling with nuclear size decoupled from cell size","type":"exact"},{"name":"transcription scaling with nuclear size decoupled from cell size during mitotic cell cycle","type":"related"},{"name":"transcription scaling with nuclear size decoupled from cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0007672"}


id: MONDO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An illusion of movement, either of the external world revolving around the individual or of the individual revolving in space. Vertigo may be associated with disorders of the inner ear (ear, inner); vestibular nerve; brainstem; or cerebral cortex. Lesions in the temporal lobe and parietal lobe may be associated with focal seizures that may feature vertigo as an ictal manifestation. (From Adams et al., Principles of Neurology, 6th ed, pp300-1)","definition_xrefs":["MESH:D014717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system origin vertigo","secondary_identifiers":["DOID:2479","ICD9:386.2","MEDGEN:56365","SCTID:38403006","UMLS:C0155503"],"synonyms":[{"name":"central vestibular vertigo","type":"exact"},{"name":"vertigo of central origin","type":"exact"}],"termid":"MONDO:0002317","xrefs":{"Monarch":{"xref_id":"0002317"}}}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: GO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right ventricular compact myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003221"},{"relation_name":"is_a","term_name":"ventricular compact myocardium morphogenesis","termid":"GO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular compact myocardium morphogenesis","termid":"GO:0003226"}


id: GO:0060003
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107866],"is_not":false,"summary":null,"term":"GO:0060003"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions out of a cell or organelle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"copper ion export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper export","type":"exact"}],"termid":"GO:0060003","terms_by_termid":{"GO:0060003":null}}


id: MONDO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation and ulceration of the oral mucosa as a result of chemotherapy treatment.","definition_xrefs":["EFO:0006313"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced oral mucositis","secondary_identifiers":["UMLS:C2887631","MEDGEN:853868"],"termid":"MONDO:0005588","xrefs":{"Monarch":{"xref_id":"0005588"}}}


id: PBO:0057041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-1","termid":"PBO:0057041"}


id: PBO:0003705
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by MBF complex","termid":"PBO:0003705"}


id: GO:0071961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the chromosome arms during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, arms","synonyms":[{"name":"mitotic sister chromatid cohesion along arms","type":"exact"},{"name":"sister chromatid cohesion along arms at mitosis","type":"exact"}],"termid":"GO:0071961"}


id: MONDO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"noninfectious dermatoses of eyelid","secondary_identifiers":["ICD9:373.3","MEDGEN:509831","SCTID:111524003","UMLS:C0155176","DOID:1894","icd11.foundation:849793428"],"synonyms":[{"name":"non-infected eyelid dermatoses","type":"exact"}],"termid":"MONDO:0002137","xrefs":{"Monarch":{"xref_id":"0002137"}}}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0004233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercalciuric nephrolithiasis","termid":"PBO:0004233"}


id: MONDO:0024890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the pineocyte, a cell with photosensory and neuroendocrine functions. It may be composed of mature elements or primitive, immature cells. The cellular composition determines the biological behavior and clinical outcome. Three types are recognized: pineoblastoma, pineocytoma, and pineal parenchymal tumor of intermediate differentiation (Adapted from WHO.)","definition_xrefs":["NCIT:C6965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pineal parenchymal cell neoplasm","secondary_identifiers":["ICDO:9360/1"],"synonyms":[{"name":"neoplasm of pineal gland","type":"exact"},{"name":"neoplasm of the pineal gland","type":"exact"},{"name":"pineal gland neoplasm","type":"exact"},{"name":"pineal gland tumor","type":"exact"},{"name":"pineal gland tumour","type":"exact"},{"name":"pineal parenchymal cell neoplasm","type":"exact"},{"name":"pineal parenchymal cell tumor","type":"exact"},{"name":"pineal parenchymal cell tumour","type":"exact"},{"name":"pineal parenchymal neoplasm","type":"exact"},{"name":"pineal parenchymal tumor","type":"exact"},{"name":"pineal parenchymal tumour","type":"exact"},{"name":"pineocytic neoplasm","type":"exact"},{"name":"pineocytic tumor","type":"exact"},{"name":"pineocytic tumour","type":"exact"},{"name":"tumor of pineal gland","type":"exact"},{"name":"tumor of the pineal gland","type":"exact"},{"name":"tumour of pineal gland","type":"exact"},{"name":"tumour of the pineal gland","type":"exact"}],"termid":"MONDO:0024890","xrefs":{"Monarch":{"xref_id":"0024890"}}}


id: GO:0043621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a domain within the same polypeptide.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein self-association (obsolete GO:0043621)","synonyms":[{"name":"intramolecular protein binding","type":"exact"},{"name":"protein self association","type":"exact"},{"name":"protein self binding","type":"exact"}],"termid":"GO:0043621"}


id: GO:0106041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GABA-A receptor activity (obsolete GO:0106041)","termid":"GO:0106041"}


id: GO:1990558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which malonate(1-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial malonate(1-) transmembrane transport","termid":"GO:1990558"}


id: GO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25830295","PMID:21191012","PMID:7745740","PMID:20194595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation","secondary_identifiers":["VZ:811","GO:0051811"],"synonyms":[{"name":"active evasion of host immune response via regulation of host complement system","type":"related"},{"name":"active evasion of immune response of other organism via regulation of complement system of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host complement system","type":"exact"},{"name":"active immune evasion via regulation of host complement system","type":"exact"},{"name":"evasion of host immune response via modulation of host complement system","type":"exact"},{"name":"evasion of host immune response via regulation of host complement system","type":"exact"},{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0042784"}


id: PBO:0070361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 37","termid":"PBO:0070361"}


id: MONDO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, 2","secondary_identifiers":["UMLS:C4693870","DOID:0080732","GARD:17975","MEDGEN:1632001","OMIM:618000","Orphanet:536532"],"synonyms":[{"name":"EDSCLL2","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like, 2","type":"exact"}],"termid":"MONDO:0054813","xrefs":{"Monarch":{"xref_id":"0054813"}}}


id: PBO:0041672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 1","termid":"PBO:0041672"}


id: PBO:0080497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor","termid":"PBO:0080497"}


id: PBO:0091180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apocytochrome b","termid":"PBO:0091180"}


id: PR:O59815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.06 gene.","definition_xrefs":["UniProtKB:O59815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.06","synonyms":[{"name":"Spom972h-SPCC794.06","type":"exact"},{"name":"malate permease (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59815"}


id: PATO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed medially.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial orientation","synonyms":[{"name":"medially directed","type":"exact"}],"termid":"PATO:0002498"}


id: PBO:0059850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 3","termid":"PBO:0059850"}


id: MONDO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic cutaneous lupus erythematosus (CCLE) is a form of cutaneous lupus erythematosus (CLE) that includes five different forms: discoid lupus erythematosus (DLE), chilblain lupus, hypertrophic or verrucous lupus erythematosus, lupus erythematosus tumidus, and lupus erythematosus panniculitis.","definition_xrefs":["Orphanet:163531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic cutaneous lupus erythematosus","secondary_identifiers":["MedDRA:10057929","GARD:20043","icd11.foundation:1849568465"],"synonyms":[{"name":"cutaneous lupus erythematosus, chronic","type":"exact"}],"termid":"MONDO:0015574","xrefs":{"Monarch":{"xref_id":"0015574"}}}


id: PBO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (predicted)","termid":"PBO:0005860"}


id: PBO:0076117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 1","termid":"PBO:0076117"}


id: PBO:0030812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_anisomycin","termid":"PBO:0030812"}


id: MONDO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glial tumor of neuroepithelial tissue with unknown origin (obsolete MONDO:0016704)","secondary_identifiers":["Orphanet:251668"],"termid":"MONDO:0016704","xrefs":{"Monarch":{"xref_id":"0016704"}}}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: PBO:0079281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTL family tubulin polyglutamylase complex subunit L1","termid":"PBO:0079281"}


id: MONDO:0859598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute erythroid leukemia characterized by the presence of at least 50% erythroid precursors and at least 20% myeloblasts in the bone marrow.","definition_xrefs":["DOID:0080916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute erythroid leukemia","termid":"MONDO:0017858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"erythroleukemia","secondary_identifiers":["UMLS:C4520840","MEDGEN:1614281","NCIT:C7152"],"termid":"MONDO:0859598","xrefs":{"Monarch":{"xref_id":"0859598"}}}


id: PBO:0078333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-5","termid":"PBO:0078333"}


id: PBO:0058863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9718","termid":"PBO:0058863"}


id: GO:0003006
data:
  {"annotated_genes":["SJAG_02718","SJAG_03688","SJAG_01076","SJAG_04271","SJAG_04275","SJAG_00486","SJAG_02736","SJAG_03057","SJAG_02079","SJAG_02320","SJAG_02226","SJAG_04868","SJAG_04615","SJAG_02460","SJAG_04483","SJAG_03483","SJAG_04781","SJAG_04922","SJAG_02169","SJAG_00974","SJAG_00405","SJAG_01068","SJAG_01410","SJAG_01321","SJAG_01419","SJAG_01769","SJAG_02319","SJAG_06638","SJAG_02401","SJAG_04238","SJAG_01113","SJAG_00247","SJAG_03746","SJAG_00663","SJAG_02248","SJAG_03915","SJAG_03221","SJAG_04184","SJAG_00971","SJAG_01601","SJAG_00757","SJAG_04470","SJAG_02529","SJAG_01531","SJAG_02241","SJAG_03090","SJAG_00399","SJAG_03097","SJAG_01483","SJAG_05153","SJAG_02724","SJAG_01677","SJAG_01662","SJAG_00826","SJAG_02556","SJAG_03997","SJAG_03013","SJAG_04080","SJAG_02712","SJAG_01495","SJAG_03587","SJAG_03557","SJAG_03536","SJAG_02828","SJAG_04853","SJAG_05309","SJAG_00821","SJAG_00114","SJAG_04901","SJAG_00993","SJAG_05239","SJAG_04140","SJAG_04010","SJAG_03501","SJAG_00073","SJAG_01465","SJAG_04859","SJAG_04236","SJAG_01017","SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100728,111526,112725,96921,96498,105135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[93987,111331],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88165,90207,88658,91737],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[104172,109086,117811,117819,114101],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[91467,104986,72906],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[118562,118863,105302,99902,119044,110130,91256,101714,95343,97539,97578,98826,107398,113948],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[106846,92259,97540,99835,107732,99834,102921,96854,113949,104130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[99119,116873,118872,87884],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[96151,97412,115044,99120,87885,116826,110316,110835,100581,89247,89119,118791,106083,106646,108531],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[107066,119114,119115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[99058,96632,92645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[94049,102958,108532,103228],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[111214],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102294],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90691],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[118260],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075319"},{"annotations":[92156],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[116955],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[93325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"},{"annotations":[99836,99837,94475,100117,106026,115997],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"developmental 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process involved in reproduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"puberty","type":"narrow"},{"name":"reproductive developmental process","type":"related"}],"termid":"GO:0003006","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:0075319":null,"GO:1903023":null,"GO:1903024":null}}


id: PR:Q09727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp20 gene.","definition_xrefs":["UniProtKB:Q09727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L23-like mitochondrial ribosomal protein Mrp20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.08","synonyms":[{"name":"54S ribosomal protein L23, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPAC31A2.08","type":"related"},{"name":"Spom972h-mrp20","type":"exact"}],"termid":"PR:Q09727"}


id: GO:0030414
data:
  {"annotated_genes":["SJAG_00460","SJAG_04505","SJAG_04633","SJAG_04398","SJAG_01072"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99969],"is_not":false,"summary":null,"term":"GO:0030414"},{"annotations":[103283,66204,116854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[93154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04398":null,"SJAG_04505":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0004857","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"peptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"protease inhibitor activity","type":"narrow"}],"termid":"GO:0030414","terms_by_termid":{"GO:0004866":null,"GO:0004867":null,"GO:0030414":null}}


id: MONDO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parastremmatic dwarfism is a very rare chondrodysplasia characterized by severe dwarfism, kyphoscoliosis, stiffness of large joints and distortion of lower limbs.","definition_xrefs":["Orphanet:2646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parastremmatic dwarfism","secondary_identifiers":["icd11.foundation:431936114","MEDGEN:358366","UMLS:C1868616","DOID:0111539","GARD:4222","OMIM:168400","SCTID:722210007","MESH:C537172"],"synonyms":[{"name":"Parastremmatic dysplasia","type":"related"},{"name":"parastremmatic dwarfism","type":"exact"}],"termid":"MONDO:0008196","xrefs":{"Monarch":{"xref_id":"0008196"}}}


id: PBO:0050411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D like","termid":"PBO:0050411"}


id: MONDO:0014670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADGRG6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 9","secondary_identifiers":["MEDGEN:903881","OMIM:616503","UMLS:C4225303"],"synonyms":[{"name":"ADGRG6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS9","type":"related"},{"name":"lethal congenital contracture syndrome 9","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADGRG6","type":"exact"},{"name":"lethal congenital contracture syndrome type 9","type":"exact"}],"termid":"MONDO:0014670","xrefs":{"Monarch":{"xref_id":"0014670"}}}


id: GO:0009080
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"pyruvate family amino acid breakdown","type":"exact"},{"name":"pyruvate family amino acid catabolism","type":"exact"},{"name":"pyruvate family amino acid degradation","type":"exact"}],"termid":"GO:0009080","terms_by_termid":{"GO:0042853":null}}


id: GO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: anthracene + 2 H2O = cis-9,10-dihydroanthracene-9,10-diol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete anthracene 9,10-dioxygenase activity (obsolete GO:0034816)","termid":"GO:0034816"}


id: MONDO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, inherited, popliteal pterygium syndrome characterized by severe popliteal webbing, microcephaly, a typical face with short palpebral fissures, ankyloblepharon, hypoplastic nose, filiform bands between the jaws and facial clefts, oligosyndactyly, genital abnormalities, and additional ectodermal anomalies (i.e. absent hair, eyebrows, lashes, nails). It is often fatal in the neonatal period, but patients living until childhood have been reported.","definition_xrefs":["Orphanet:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bartsocas-Papas syndrome 1","secondary_identifiers":["MESH:C564874","SCTID:722376008","OMIM:263650","MEDGEN:337894","NCIT:C168990","UMLS:C1849718","GARD:4436"],"synonyms":[{"name":"BPS","type":"related"},{"name":"Bartsocas Papas syndrome","type":"exact"},{"name":"Bartsocas-Papas syndrome","type":"exact"},{"name":"autosomal recessive popliteal pterygium syndrome","type":"exact"},{"name":"lethal popliteal pterygium syndrome","type":"exact"},{"name":"multiple pterygium syndrome, Aslan type","type":"related"},{"name":"popliteal pterygium syndrome lethal type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type 1","type":"exact"},{"name":"popliteal pterygium syndrome, lethal type","type":"exact"},{"name":"pterygium popliteal lethal type","type":"related"},{"name":"pterygium, popliteal, lethal type","type":"related"}],"termid":"MONDO:0009901","xrefs":{"Monarch":{"xref_id":"0009901"}}}


id: GO:1900134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"negatively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renin secretion into blood stream","synonyms":[{"name":"down regulation of renin release into blood stream","type":"exact"},{"name":"down regulation of renin secretion into blood stream","type":"exact"},{"name":"down-regulation of renin release into blood stream","type":"exact"},{"name":"down-regulation of renin secretion into blood stream","type":"exact"},{"name":"downregulation of renin release into blood stream","type":"exact"},{"name":"downregulation of renin secretion into blood stream","type":"exact"},{"name":"inhibition of renin release into blood stream","type":"narrow"},{"name":"inhibition of renin secretion into blood stream","type":"narrow"},{"name":"negative regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900134"}


id: GO:0006038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall chitin biosynthetic process (obsolete GO:0006038)","synonyms":[{"name":"cell wall chitin anabolism","type":"exact"},{"name":"cell wall chitin biosynthesis","type":"exact"},{"name":"cell wall chitin formation","type":"exact"},{"name":"cell wall chitin synthesis","type":"exact"}],"termid":"GO:0006038"}


id: GO:0102553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [pyruvate dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein) (obsolete GO:0102553)","termid":"GO:0102553"}


id: PBO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 30, pseudogene","termid":"PBO:0070073"}


id: MONDO:1010561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida occulta that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida occulta, non-human animal","termid":"MONDO:1010048"},{"relation_name":"is_a","term_name":"spina bifida, dog","termid":"MONDO:1010556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida occulta, dog","secondary_identifiers":["OMIA:000934-9615"],"termid":"MONDO:1010561","xrefs":{"Monarch":{"xref_id":"1010561"}}}


id: PBO:0031226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_caffeine","termid":"PBO:0031226"}


id: PATO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001130 ratio value (obsolete PATO:0001130)","termid":"PATO:0001130"}


id: GO:0008237
data:
  {"annotated_genes":["SJAG_01004","SJAG_03396","SJAG_02503","SJAG_01321","SJAG_03147","SJAG_02419","SJAG_01281","SJAG_00795","SJAG_00742","SJAG_03744","SJAG_03686","SJAG_00730","SJAG_00764","SJAG_01430","SJAG_02900","SJAG_03022","SJAG_04497","SJAG_04533","SJAG_00406","SJAG_03009","SJAG_03429","SJAG_04215","SJAG_00969","SJAG_00762","SJAG_00546","SJAG_02244","SJAG_06636","SJAG_04858","SJAG_03586","SJAG_01312","SJAG_04514","SJAG_02809","SJAG_02341","SJAG_03393","SJAG_04103","SJAG_04651","SJAG_02397","SJAG_01816","SJAG_01179","SJAG_02033","SJAG_00479","SJAG_00451","SJAG_04641","SJAG_03407","SJAG_01528","SJAG_01088","SJAG_01896","SJAG_01542","SJAG_03648","SJAG_01838","SJAG_00573","SJAG_00181","SJAG_03752","SJAG_00662","SJAG_00720"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62156,64472,66545,72131,76301,98809,106988,114671],"is_not":false,"summary":null,"term":"GO:0008237"},{"annotations":[96521,88448,105820,114837,68097,74078,94110,99871,105651,113643,95272,115981,115194,115266,104625,110352,111779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[97833,114474,74211,64290,63579,72599,57780,60102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[74178,57992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[60284,61115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"},{"annotations":[75758,108089,66817,70116,97315,69686,59907,76694,74730,109212,69410,78021,77232,98306,77972,77724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004222"},{"annotations":[68978,67699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008235"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00406":null,"SJAG_00451":null,"SJAG_00479":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00730":null,"SJAG_00742":null,"SJAG_00762":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00969":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01179":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01528":null,"SJAG_01542":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02419":null,"SJAG_02503":null,"SJAG_02809":null,"SJAG_02900":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03147":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03407":null,"SJAG_03429":null,"SJAG_03586":null,"SJAG_03648":null,"SJAG_03686":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_04103":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04651":null,"SJAG_04858":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"metallopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5211387","Reactome:R-HSA-2022368","Reactome:R-HSA-5211405","Reactome:R-HSA-3928660","Reactome:R-HSA-5211340","Reactome:R-HSA-157629","Reactome:R-HSA-2022399","Reactome:R-HSA-2220976","Reactome:R-HSA-9759522","Reactome:R-HSA-157632","Reactome:R-HSA-5211400","Reactome:R-HSA-8986181","Reactome:R-HSA-9013284","Reactome:R-HSA-2730752","Reactome:R-HSA-5211356","Reactome:R-HSA-5211391","Reactome:R-HSA-193679","Reactome:R-HSA-2666278","Reactome:R-HSA-9662837","Reactome:R-HSA-2022393","Reactome:R-HSA-2022396","Reactome:R-HSA-9604264","Reactome:R-HSA-2220944"],"synonyms":[{"name":"metalloprotease activity","type":"narrow"},{"name":"metalloproteinase activity","type":"narrow"}],"termid":"GO:0008237","terms_by_termid":{"GO:0004181":null,"GO:0004222":null,"GO:0008235":null,"GO:0008237":null,"GO:0070006":null,"GO:0070573":null,"GO:0140492":null}}


id: GO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100057)","termid":"GO:0100057"}


id: MONDO:0700250
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87171],"is_not":false,"summary":null,"term":"MONDO:0700250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:220110","MEDGEN:1750917","UMLS:C5435656","GARD:15158","DOID:0070491"],"termid":"MONDO:0700250","terms_by_termid":{"MONDO:0700250":null},"xrefs":{"Monarch":{"xref_id":"0700250"}}}


id: PBO:0085965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the lethality caused by a rad53 null mutation","termid":"PBO:0085965"}


id: MONDO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"localized anterior staphyloma","secondary_identifiers":["UMLS:C0155362","ICD9:379.14","DOID:13787","MEDGEN:509936","SCTID:21946002"],"synonyms":[{"name":"anterior staphyloma, localised","type":"exact"},{"name":"anterior staphyloma, localized","type":"exact"}],"termid":"MONDO:0001799","xrefs":{"Monarch":{"xref_id":"0001799"}}}


id: PBO:0030656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mating_efficiency","termid":"PBO:0030656"}


id: GO:1902103
data:
  {"annotated_genes":["SJAG_03327","SJAG_01330","SJAG_01082","SJAG_04126","SJAG_01837","SJAG_01515","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98691],"is_not":false,"summary":null,"term":"GO:1902103"},{"annotations":[106330,114518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75209,116694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[113804],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101341],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"is_a","term_name":"negative regulation of meiotic chromosome separation","termid":"GO:1905133"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"down-regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"downregulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"inhibition of meiotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of meiotic cell cycle","type":"narrow"},{"name":"negative regulation of meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:1902103","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0070484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 19","termid":"PBO:0070484"}


id: SO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide that acts as a signal for both membrane translocation and lipid attachment in prokaryotes.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lipoprotein_signal_peptide","synonyms":[{"name":"lipoprotein signal peptide","type":"exact"},{"name":"prokaryotic membrane lipoprotein lipid attachment site","type":"exact"}],"termid":"SO:0100009"}


id: GO:0045254
data:
  {"annotated_genes":["SJAG_03290","SJAG_03064","SJAG_02006","SJAG_02158","SJAG_00866"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72670,73301,74539,87377,94974],"is_not":false,"summary":null,"term":"GO:0045254"}]},"cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: pyruvate dehydrogenase (E1, which may be a homodimer or a heterotetramer of two alpha and two beta subunits, depending on species), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Additional proteins may also be present.","definition_xrefs":["PMID:36863425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_03064":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyruvate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Pyruvate_dehydrogenase_complex","GO:0009364"],"synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"exact"}],"termid":"GO:0045254","terms_by_termid":{"GO:0045254":null}}


id: PR:000027538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste11 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11","synonyms":[{"name":"STE11","type":"related"},{"name":"STEX","type":"related"},{"name":"ste11","type":"exact"}],"termid":"PR:000027538"}


id: PBO:0090911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0090911"}


id: PBO:0089239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit","termid":"PBO:0089239"}


id: MONDO:0009903
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85366],"is_not":false,"summary":null,"term":"MONDO:0009903"}]},"cv_name":"mondo","definition":"Postaxial acrofacial dysostosis (POADS) is a type of acrofacial dysostosis characterized by mandibular and malar hypoplasia, small and cup-shaped ears, lower lid ectropion, and symmetrical postaxial limb deficiencies with absence of the fifth digital ray and ulnar hypoplasia.","definition_xrefs":["Orphanet:246"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"postaxial acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:759.89","SCTID:66038001","OMIM:263750","GARD:8410","DOID:0111259","MESH:C537680","icd11.foundation:70602060","MEDGEN:120522","NORD:1448","UMLS:C0265257"],"synonyms":[{"name":"GWAFD","type":"related"},{"name":"Genee-Wiedemann acrofacial dysostosis","type":"related"},{"name":"Genee-Wiedemann syndrome","type":"related"},{"name":"Mandibulfacial dysostosis with postaxial limb anomalies","type":"exact"},{"name":"Miller Syndrome","type":"exact"},{"name":"Miller syndrome","type":"exact"},{"name":"POADS","type":"exact"},{"name":"POADS syndrome","type":"related"},{"name":"Wildervanck-Smith syndrome","type":"related"},{"name":"acrofacial dysostosis, Genee-Wiedmann type","type":"exact"},{"name":"postaxial acrodysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis (POADS) syndrome","type":"related"}],"termid":"MONDO:0009903","terms_by_termid":{"MONDO:0009903":null},"xrefs":{"Monarch":{"xref_id":"0009903"}}}


id: GO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + acetyl-CoA = N(4)-acetyl-L-2,4-diaminobutyrate + CoA + H+.","definition_xrefs":["EC:2.3.1.178","RHEA:16901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"diaminobutyrate acetyltransferase activity","secondary_identifiers":["MetaCyc:R102-RXN","KEGG_REACTION:R06978"],"synonyms":[{"name":"2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"DAB acetyltransferase activity","type":"related"},{"name":"DABA acetyltransferase activity","type":"related"},{"name":"DABAcT","type":"related"},{"name":"EctA","type":"related"},{"name":"L-2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate 4-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate N4-acetyltransferase activity","type":"related"},{"name":"diaminobutyric acid acetyltransferase activity","type":"related"}],"termid":"GO:0033816"}


id: PBO:0078937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 5-1","termid":"PBO:0078937"}


id: GO:0070982
data:
  {"annotated_genes":["SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-asparagine, (2S)-2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-asparagine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine metabolism","type":"exact"}],"termid":"GO:0070982","terms_by_termid":{"GO:0070981":null}}


id: GO:0042679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a compound eye cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"compound eye cone cell fate commitment","termid":"GO:0042676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate specification","secondary_identifiers":["GO:0042678"],"termid":"GO:0042679"}


id: GO:0097121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A1 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A1-CDK1 complex","termid":"GO:0097121"}


id: PR:Q10179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01183","PANTHER:PTHR10745:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.03","secondary_identifiers":["UniProtKB:Q10179"],"synonyms":[{"name":"AP-4-A synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GlyRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GARS","type":"exact"},{"name":"diadenosine tetraphosphate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10179"}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: FYPO:0005094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the S-phase DNA damage checkpoint is lower than in wild type during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"},{"relation_name":"is_a","term_name":"decreased duration of S-phase DNA damage checkpoint","termid":"FYPO:0004371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of S-phase DNA damage checkpoint during cellular response to hydroxyurea","synonyms":[{"name":"decreased duration of S-phase DNA damage checkpoint activation during cellular response to hydroxyurea","type":"exact"},{"name":"decreased duration of S-phase DNA damage checkpoint during cellular response to HU","type":"exact"},{"name":"decreased duration of S-phase DNA damage checkpoint during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"decreased duration of S-phase DNA damage checkpoint during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased duration of intra-S DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"},{"name":"decreased duration of mitotic S-phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"},{"name":"premature S-phase DNA damage checkpoint deactivation during cellular response to hydroxyurea","type":"related"},{"name":"reduced duration of S-phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005094"}


id: PBO:0059708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 16","termid":"PBO:0059708"}


id: PBO:0077443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 177","termid":"PBO:0077443"}


id: MONDO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor arising in the remaining kidney following treatment of the original Wilms tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Wilms tumor 1","termid":"MONDO:0008679"},{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"metachronous kidney Wilms' tumor","secondary_identifiers":["MEDGEN:233696","NCIT:C38158","DOID:5178","UMLS:C1334705"],"synonyms":[{"name":"metachronous Wilms tumor","type":"exact"},{"name":"metachronous Wilms tumor of the kidney","type":"exact"},{"name":"metachronous Wilms tumour","type":"exact"},{"name":"metachronous Wilms tumour of the kidney","type":"exact"},{"name":"metachronous Wilms' tumor","type":"exact"},{"name":"metachronous Wilms' tumour","type":"exact"}],"termid":"MONDO:0003317","xrefs":{"Monarch":{"xref_id":"0003317"}}}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: GO:0005811
data:
  {"annotated_genes":["SJAG_04532","SJAG_02089","SJAG_01036","SJAG_03471","SJAG_04973","SJAG_02163","SJAG_02980","SJAG_02487","SJAG_00624","SJAG_02907","SJAG_02543","SJAG_03360","SJAG_03609","SJAG_04041","SJAG_02161","SJAG_03235","SJAG_03909","SJAG_03604"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66504,70684,71268,73871,73955,74361,77221,78918,89989,90071,91860,94615,97667,97755,98463,114202,114814,117612],"is_not":false,"summary":null,"term":"GO:0005811"}]},"cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_01036":null,"SJAG_02089":null,"SJAG_02161":null,"SJAG_02163":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_02980":null,"SJAG_03235":null,"SJAG_03360":null,"SJAG_03471":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_03909":null,"SJAG_04041":null,"SJAG_04532":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lipid droplet","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"adiposome","type":"exact"},{"name":"lipid body","type":"exact"},{"name":"lipid particle","type":"exact"}],"termid":"GO:0005811","terms_by_termid":{"GO:0005811":null}}


id: GO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD27, a receptor found on the surface of T cells and some B cells and NK cells.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CD27 receptor binding","termid":"GO:0005175"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: GO:0046054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dGMP metabolic process","synonyms":[{"name":"dGMP metabolism","type":"exact"}],"termid":"GO:0046054"}


id: PBO:0003918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mi 1","termid":"PBO:0003918"}


id: GO:0004549
data:
  {"annotated_genes":["SJAG_03328","SJAG_01260","SJAG_04907","SJAG_00955","SJAG_00306","SJAG_03796","SJAG_03234","SJAG_01623","SJAG_06613","SJAG_02553","SJAG_04582","SJAG_00754","SJAG_04916"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68298,96776,115335,71080,63532,104566,102063,94684,60511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[72920,117710,71232,78944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in tRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01260":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696815","Reactome:R-HSA-6786854","Reactome:R-HSA-5696813","Reactome:R-HSA-6785722"],"synonyms":[{"name":"tRNA-specific RNase activity","type":"exact"}],"termid":"GO:0004549","terms_by_termid":{"GO:0000213":null,"GO:0004526":null}}


id: PBO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 4","termid":"PBO:0046019"}


id: GO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"medium-chain fatty acid catabolic process","synonyms":[{"name":"medium chain fatty acid catabolic process","type":"exact"},{"name":"medium chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid breakdown","type":"exact"},{"name":"medium-chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid degradation","type":"exact"}],"termid":"GO:0051793"}


id: GO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of inter-Golgi cisterna transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, inter-Golgi cisterna","termid":"GO:0048204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, inter-Golgi cisterna","termid":"GO:0010787"}


id: MONDO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal idiopathic viral infection (obsolete MONDO:0018110)","secondary_identifiers":["Orphanet:35064"],"termid":"MONDO:0018110","xrefs":{"Monarch":{"xref_id":"0018110"}}}


id: PBO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual adaptor of phosphotyrosine and 3-phosphoinositides 1","termid":"PBO:0044554"}


id: PBO:0067609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 778, pseudogene","termid":"PBO:0067609"}


id: MONDO:0008428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Septooptic dysplasia (SOD) is a clinically heterogeneous disorder characterized by the classical triad of optic nerve hypoplasia, pituitary hormone abnormalities and midline brain defects.","definition_xrefs":["Orphanet:3157"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","termid":"MONDO:0015220"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","termid":"MONDO:0015310"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disease associated with non-acquired combined pituitary hormone deficiency (obsolete MONDO:0019827)","termid":"MONDO:0019827"},{"relation_name":"excluded_subClassOf","term_name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","termid":"MONDO:0020145"},{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"septooptic dysplasia","secondary_identifiers":["DOID:0060857","UMLS:C0338503","GARD:7627","NANDO:1200560","NCIT:C85063","NANDO:2200820","SCTID:7611002","NANDO:1200561","MedDRA:10067159","MEDGEN:90926","MESH:D025962","OMIM:182230"],"synonyms":[{"name":"De Morsier syndrome","type":"exact"},{"name":"Growth hormone deficiency with pituitary anomalies","type":"related"},{"name":"SOD","type":"exact"},{"name":"hypopituitarism and septooptic 'dysplasia'","type":"related"},{"name":"pituitary hormone deficiency, combined, 5","type":"related"},{"name":"septo-optic dysplasia","type":"exact"},{"name":"septo-optic dysplasia sequence","type":"exact"},{"name":"septo-optic dysplasia spectrum","type":"related"},{"name":"septo-optic dysplasia with growth hormone deficiency","type":"related"},{"name":"septooptic dysplasia","type":"exact"}],"termid":"MONDO:0008428","xrefs":{"Monarch":{"xref_id":"0008428"}}}


id: PR:Q9UUD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prp38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.08","synonyms":[{"name":"Spom972h-prp38","type":"exact"}],"termid":"PR:Q9UUD2"}


id: PBO:0109609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24","termid":"PBO:0109609"}


id: FYPO:0000098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to calcium","synonyms":[{"name":"hypersensitive to calcium","type":"exact"},{"name":"sensitive to calcium chloride","type":"narrow"},{"name":"sensitive to calcium during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions","type":"exact"}],"termid":"FYPO:0000098"}


id: MONDO:1011792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute progressive myopathy, non-human animal","secondary_identifiers":["OMIA:000696"],"termid":"MONDO:1011792","xrefs":{"Monarch":{"xref_id":"1011792"}}}


id: PBO:0049390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 3, mitochondrial","termid":"PBO:0049390"}


id: GO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cluster of several metal atoms, including manganese or calcium, with one or more bridging (mu-bond) oxygen atoms; amino acids residues in proteins that may ligate the metal oxygen cluster are histidine, aspartate, and glutamate.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete metal incorporation into metallo-oxygen cluster (obsolete GO:0030923)","termid":"GO:0030923"}


id: MONDO:0100224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex I deficiency, nuclear type 1","secondary_identifiers":["DOID:0112074","GARD:15201","OMIM:252010","NANDO:1200180"],"synonyms":[{"name":"MC1DN1","type":"exact"},{"name":"NADH-coenzyme Q reductase deficiency","type":"exact"},{"name":"NADH:Q(1) oxidoreductase deficiency","type":"exact"},{"name":"mitochondrial NADH dehydrogenase component of Complex I, deficiency of","type":"exact"},{"name":"mitochondrial complex 1 deficiency","type":"broad"},{"name":"mitochondrial complex I deficiency","type":"broad"},{"name":"mitochondrial complex I deficiency, nuclear type 1","type":"exact"}],"termid":"MONDO:0100224","xrefs":{"Monarch":{"xref_id":"0100224"}}}


id: MONDO:0011818
data:
  {"annotated_genes":["SJAG_02723","SJAG_03067","SJAG_00991","SJAG_05346","SJAG_00289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86571,86572,86573,86574,86575],"is_not":false,"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia","termid":"MONDO:0019009"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:607341","GARD:10190","MESH:C537067","Orphanet:268994","MEDGEN:339510","UMLS:C1846385"],"synonyms":[{"name":"CDT","type":"related"},{"name":"FCD 2A","type":"related"},{"name":"FCD 2B","type":"related"},{"name":"FCD type II","type":"exact"},{"name":"FCDT","type":"related"},{"name":"FCORD2","type":"related"},{"name":"Fcd2","type":"related"},{"name":"cortical dysplasia of Taylor","type":"related"},{"name":"cortical dysplasia of Taylor with balloon cells","type":"related"},{"name":"cortical dysplasia of Taylor without balloon cells","type":"related"},{"name":"cortical dysplasia of Taylor, dysplasia only","type":"related"},{"name":"cortical dysplasia, Taylor type","type":"exact"},{"name":"focal cortical dysplasia of Taylor","type":"related"},{"name":"focal cortical dysplasia of Taylor, type 2A","type":"related"},{"name":"focal cortical dysplasia of Taylor, type 2B","type":"related"},{"name":"focal cortical dysplasia type 2","type":"related"},{"name":"focal cortical dysplasia type II","type":"related"},{"name":"focal cortical dysplasia, type 2","type":"related"},{"name":"focal cortical dysplasia, type 2A","type":"related"},{"name":"focal cortical dysplasia, type 2B","type":"related"},{"name":"focal cortical dysplasia, type II","type":"related"},{"name":"focal cortical dysplasia, type II, somatic","type":"exact"},{"name":"isolated focal cortical dysplasia type 2","type":"exact"}],"termid":"MONDO:0011818","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0011818"}}}


id: MONDO:0975747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 95","secondary_identifiers":["DOID:0070594","OMIM:620917"],"termid":"MONDO:0975747","xrefs":{"Monarch":{"xref_id":"0975747"}}}


id: PBO:0062268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 4 pseudogene","termid":"PBO:0062268"}


id: PBO:0090193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific cyclin Rem1","termid":"PBO:0090193"}


id: GO:0044455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a mitochondrial membrane, either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial membrane part (obsolete GO:0044455)","termid":"GO:0044455"}


id: PBO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B1","termid":"PBO:0046426"}


id: PBO:0043296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 14A","termid":"PBO:0043296"}


id: PBO:0050010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 2 pseudogene 1","termid":"PBO:0050010"}


id: PBO:0074767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3A","termid":"PBO:0074767"}


id: PBO:0078424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-5","termid":"PBO:0078424"}


id: FYPO:0006235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal level of macromolecular complex","synonyms":[{"name":"normal level of macromolecular complex during mitotic cell cycle","type":"related"},{"name":"normal level of macromolecular complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006235"}


id: PBO:0084930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity","termid":"PBO:0084930"}


id: GO:0005354
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110663],"is_not":false,"summary":null,"term":"GO:0005354"}]},"cv_name":"molecular_function","definition":"Enables the transfer of galactose from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"galactose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0005354","terms_by_termid":{"GO:0005354":null}}


id: GO:2001107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"negative regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"negative regulation of RhoGEF","type":"exact"}],"termid":"GO:2001107"}


id: GO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA.","definition_xrefs":["EC:5.1.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase activity","secondary_identifiers":["MetaCyc:5.1.99.4-RXN","Reactome:R-HSA-193763","RHEA:12657","Reactome:R-HSA-193736","Reactome:R-HSA-193452","Reactome:R-HSA-192056","Reactome:R-HSA-389897"],"synonyms":[{"name":"2-methylacyl-CoA 2-epimerase activity","type":"related"}],"termid":"GO:0008111"}


id: MONDO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized necrosis of the adipose tissue in the breast. Clinically, it may present as a mass. Causes include injury, surgical procedures, and radiation treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat necrosis of breast","secondary_identifiers":["DOID:10691","NCIT:C3661","UMLS:C0156321","icd11.foundation:149925294","ICD9:611.3","ICD10CM:N64.1","MEDGEN:57847","SCTID:21381006"],"synonyms":[{"name":"breast fat necrosis","type":"exact"},{"name":"fat Necrosis of the breast","type":"exact"}],"termid":"MONDO:0001101","xrefs":{"Monarch":{"xref_id":"0001101"}}}


id: PATO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000789 respiratory function value (obsolete PATO:0000789)","termid":"PATO:0000789"}


id: PBO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-26 (pseudogene)","termid":"PBO:0051441"}


id: PBO:0068206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 513","termid":"PBO:0068206"}


id: GO:0061042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis involved in wound healing","termid":"GO:0060055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular wound healing","termid":"GO:0061042"}


id: GO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fermentation that does not include the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"non-glycolytic fermentation","termid":"GO:0019662"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"},{"name":"biogenic amine receptor","type":"narrow"}],"termid":"GO:0008227"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mannan 1,3-beta-mannosidase activity (obsolete GO:0052789)","termid":"GO:0052789"}


id: PBO:0040240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7 interacting protein 2","termid":"PBO:0040240"}


id: PBO:0079951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 4","termid":"PBO:0079951"}


id: PBO:0017596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Mug165","termid":"PBO:0017596"}


id: MONDO:1011470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, ducks","secondary_identifiers":["OMIA:000037-8835"],"termid":"MONDO:1011470","xrefs":{"Monarch":{"xref_id":"1011470"}}}


id: PBO:0074771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3D","termid":"PBO:0074771"}


id: PBO:0042903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1","termid":"PBO:0042903"}


id: GO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of substance in host (obsolete GO:0052002)","termid":"GO:0052002"}


id: GO:0033697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the extent of heterochromatin formation; increases the size of a chromosomal region converted to heterochromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extent of heterochromatin assembly (obsolete GO:0033697)","synonyms":[{"name":"positive regulation of extent of heterochromatin formation","type":"exact"},{"name":"positive regulation of heterochromatin spreading","type":"related"}],"termid":"GO:0033697"}


id: PR:O94725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glutamate O-methyltransferase C1393.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.13","synonyms":[{"name":"Spom972h-SPCC1393.13","type":"exact"}],"termid":"PR:O94725"}


id: MONDO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sensenbrenner syndrome (obsolete MONDO:0000362)","termid":"MONDO:0000362","xrefs":{"Monarch":{"xref_id":"0000362"}}}


id: FYPO:0006444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal transcriptional response to amino acid starvation","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006444"}


id: PBO:0077535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248","termid":"PBO:0077535"}


id: PBO:0073909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 antisense RNA 1","termid":"PBO:0073909"}


id: PBO:0067484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 618, pseudogene","termid":"PBO:0067484"}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: MOD:00220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a 4-hydroxy-L-arginine.","definition_xrefs":["PubMed:10966817","RESID:AA0215","PubMed:7650037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-arginine","synonyms":[{"name":"(2S,4Xi)-2-amino-5-[(diaminomethylidene)amino]-4-hydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-4-hydroxypentanoic acid","type":"exact"},{"name":"4-hydroxy-L-arginine","type":"exact"},{"name":"4-hydroxylated L-arginine","type":"exact"},{"name":"4HyArg","type":"exact"},{"name":"C(gamma)-hydroxyarginine","type":"exact"},{"name":"MOD_RES 4-hydroxyarginine","type":"exact"},{"name":"gamma-hydroxyarginine","type":"exact"}],"termid":"MOD:00220"}


id: MONDO:0017882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omsk hemorrhagic fever (OHF), caused by Omsk hemorrhagic fever virus (OHFV), is a zoonotic disease characterized by fever, nausea, myalgia and moderately severe hemorrhagic manifestations as well as in some cases meningitis, pneumonia and nephrosis.","definition_xrefs":["Orphanet:319266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omsk hemorrhagic fever","secondary_identifiers":["DOID:992","GARD:8254","MEDGEN:9212","ICD10CM:A98.1","MESH:D006481","UMLS:C0019103","icd11.foundation:946068954","ICD9:065.1","MedDRA:10030310","SCTID:48113006"],"termid":"MONDO:0017882","xrefs":{"Monarch":{"xref_id":"0017882"}}}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: MONDO:0015966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary eye tumor (obsolete MONDO:0015966)","secondary_identifiers":["Orphanet:183619"],"synonyms":[{"name":"genetic eye tumor","type":"related"}],"termid":"MONDO:0015966","xrefs":{"Monarch":{"xref_id":"0015966"}}}


id: RO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","termid":"RO:0002328"}


id: MONDO:1012481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, horse","secondary_identifiers":["OMIA:001894-9796"],"termid":"MONDO:1012481","xrefs":{"Monarch":{"xref_id":"1012481"}}}


id: PBO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_uracil","termid":"PBO:0030725"}


id: PBO:0080466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 2","termid":"PBO:0080466"}


id: MONDO:1011138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, alpaca","secondary_identifiers":["OMIA:001764-30538"],"termid":"MONDO:1011138","xrefs":{"Monarch":{"xref_id":"1011138"}}}


id: PBO:0071196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 37","termid":"PBO:0071196"}


id: PBO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 50","termid":"PBO:0070820"}


id: GO:0072387
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"flavin adenine dinucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 metabolic process","type":"exact"},{"name":"flavin adenine dinucleotide metabolism","type":"exact"},{"name":"flavin-adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0072387","terms_by_termid":{"GO:0006747":null}}


id: MONDO:1011891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, non-human animal","secondary_identifiers":["OMIA:001894"],"termid":"MONDO:1011891","xrefs":{"Monarch":{"xref_id":"1011891"}}}


id: PBO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0031765"}


id: GO:0141002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 L-lysine (position 16) + propionyl-CoA = CoA + H+ + histone H3 N6-propionyl-L-lysyl (position 16).","definition_xrefs":["PMID:17267393","PMID:31794431","PMID:29321206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone propionyltransferase activity","termid":"GO:0061922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H4K16 propionyltransferase activity","termid":"GO:0141002"}


id: MONDO:0008102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sick sinus syndrome in which the cause of the disease is a mutation in the HCN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome 2, autosomal dominant","secondary_identifiers":["OMIM:163800","UMLS:C1834144","GARD:18284","MESH:C563513","MEDGEN:320273"],"synonyms":[{"name":"HCN4 sick sinus syndrome","type":"exact"},{"name":"SSS2","type":"related"},{"name":"Sss, autosomal dominant","type":"related"},{"name":"atrial fibrillation with Bradyarrhythmia","type":"related"},{"name":"sick sinus syndrome 2","type":"related"},{"name":"sick sinus syndrome 2 with or without Cardiac noncompaction and/Or ascending aorta dilation","type":"related"},{"name":"sick sinus syndrome 2, autosomal dominant","type":"exact"},{"name":"sick sinus syndrome caused by mutation in HCN4","type":"exact"},{"name":"sinus bradycardia syndrome, familial, autosomal dominant","type":"related"},{"name":"sinus node disease, familial, autosomal dominant","type":"related"}],"termid":"MONDO:0008102","xrefs":{"Monarch":{"xref_id":"0008102"}}}


id: GO:0050112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + NAD+ = 2,4,6/3,5-pentahydroxycyclohexanone + H+ + NADH.","definition_xrefs":["RHEA:16949","EC:1.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol 2-dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01183","MetaCyc:MYO-INOSITOL-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"inositol 2-dehydrogenase activity","type":"broad"},{"name":"inositol:NAD 2-dehydrogenase activity","type":"exact"},{"name":"myo-inositol 2-dehydrogenase activity","type":"exact"}],"termid":"GO:0050112"}


id: GO:0010527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, RNA-mediated (obsolete GO:0010527)","termid":"GO:0010527"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: FYPO:0004016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mitochondrial DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:2065367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA content","termid":"FYPO:0001383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular mtDNA level","synonyms":[{"name":"normal mitochondrial DNA content","type":"exact"},{"name":"normal mitochondrial DNA level","type":"exact"},{"name":"normal mtDNA level","type":"exact"},{"name":"normal mtDNA level during mitotic cell cycle","type":"related"},{"name":"normal mtDNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004016"}


id: PBO:0048781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 12","termid":"PBO:0048781"}


id: GO:1905033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","PMID:23157812","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane repolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905033"}


id: PBO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1C","termid":"PBO:0043838"}


id: PBO:0090897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19","termid":"PBO:0090897"}


id: MONDO:0958123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary artery sling","secondary_identifiers":["Orphanet:658574"],"termid":"MONDO:0958123","xrefs":{"Monarch":{"xref_id":"0958123"}}}


id: PBO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 33","termid":"PBO:0071374"}


id: FYPO:0001357
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119320,119319,119321,119323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[119138,119139,119140,119465],"is_not":false,"summary":null,"term":"FYPO:0001357"},{"annotations":[119183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows normally (i.e. indistinguishably from wild type) in the vegetative growth phase of the life cycle. 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id: GO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortex over time, from its formation to the mature structure. The metanephric cortex is the outer region of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"is_a","term_name":"renal cortex development","termid":"GO:0072055"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortex development","termid":"GO:0072214"}


id: PBO:0074732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 90","termid":"PBO:0074732"}


id: MONDO:1012591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in tufted capuchin due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, tufted capuchin","secondary_identifiers":["OMIA:000202-9515"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Sapajus apella (Tufted capuchin)","type":"exact"}],"termid":"MONDO:1012591","xrefs":{"Monarch":{"xref_id":"1012591"}}}


id: PBO:0089590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin Puc1","termid":"PBO:0089590"}


id: MONDO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of spindle-shaped cells. This is a morphologic term which can be applied to a wide range of sarcomas.","definition_xrefs":["NCIT:C27005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"malignant spindle cell neoplasm","termid":"MONDO:0020663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell sarcoma","secondary_identifiers":["MEDGEN:64477","DOID:4235","ICDO:8801/3","UMLS:C0205945"],"synonyms":[{"name":"spindle cell sarcoma","type":"exact"}],"termid":"MONDO:0002927","xrefs":{"Monarch":{"xref_id":"0002927"}}}


id: MONDO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the ovary. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid stromal and related neoplasms","secondary_identifiers":["MEDGEN:926076","DOID:5169","UMLS:C4288544"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of ovary","type":"exact"},{"name":"ovarian endometrioid stromal and related neoplasms","type":"exact"},{"name":"ovarian endometrioid stromal sarcoma","type":"related"},{"name":"ovary endometrioid stromal and related neoplasms","type":"exact"}],"termid":"MONDO:0003312","xrefs":{"Monarch":{"xref_id":"0003312"}}}


id: GO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane organization (obsolete GO:0044803)","termid":"GO:0044803"}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["RHEA:13749","Reactome:R-HSA-1008248","MetaCyc:2.7.4.10-RXN"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: MONDO:0019889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 22q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 22, with variable phenotype principally characterized by varying degrees of intellectual disability and developmental delay, pre- and postnatal growth deficiency, hypotonia, and craniofacial dysmorphism (incl. microcephaly, hypertelorism, narrow and upslanted palpebral fissures, epicanthic folds, low-set dysplastic ears, broad and depressed nasal bridge, cleft lip an/or palate, long philtrum, retro/micrognathia). Congenital heart defects, as well as cerebral, skeletal, renal and genital anomalies, have also been reported.","definition_xrefs":["Orphanet:96109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 22","termid":"MONDO:0016972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 22q","secondary_identifiers":["GARD:19322","SCTID:764512003","UMLS:C4706936","MEDGEN:1642344"],"synonyms":[{"name":"distal duplication 22q","type":"exact"},{"name":"distal trisomy type 22q","type":"exact"},{"name":"telomeric duplication 22q","type":"exact"},{"name":"trisomy 22qter","type":"exact"}],"termid":"MONDO:0019889","xrefs":{"Monarch":{"xref_id":"0019889"}}}


id: GO:0008984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamate O(5)-methyl ester + H2O = protein L-glutamate + methanol.","definition_xrefs":["EC:3.1.1.61","RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein-glutamate methylesterase activity","secondary_identifiers":["RHEA:23236","MetaCyc:MCPMETEST-RXN"],"synonyms":[{"name":"CheB methylesterase activity","type":"narrow"},{"name":"chemotaxis-specific methylesterase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyl-esterase activity","type":"narrow"},{"name":"methylesterase CheB activity","type":"narrow"},{"name":"protein-L-glutamate-5-O-methyl-ester acylhydrolase activity","type":"related"},{"name":"protein-L-glutamate-O5-methyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0008984"}


id: PBO:0049747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit theta 1","termid":"PBO:0049747"}


id: GO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + acceptor + H2O = 1,3-diaminopropane + 4-aminobutanal + reduced acceptor.","definition_xrefs":["MetaCyc:SPERMIDINE-DEHYDROGENASE-RXN","EC:1.5.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"spermidine dehydrogenase activity","secondary_identifiers":["RHEA:14273"],"synonyms":[{"name":"spermidine:(acceptor) oxidoreductase activity","type":"related"},{"name":"spermidine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0050289"}


id: PBO:0063394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 1","termid":"PBO:0063394"}


id: PBO:0047019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A22","termid":"PBO:0047019"}


id: PBO:0073574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 2","termid":"PBO:0073574"}


id: PBO:0064082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase","termid":"PBO:0064082"}


id: PBO:0061348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 6","termid":"PBO:0061348"}


id: PBO:0109227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 pseudogene 1","termid":"PBO:0109227"}


id: GO:2000447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"negatively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"negative regulation of MIF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000447"}


id: PBO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter Cat1","termid":"PBO:0002989"}


id: PBO:0044536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT1-associated long intergenic non-coding RNA","termid":"PBO:0044536"}


id: GO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary sulfur sources and then activates genes to scavenge the last traces of the primary sulfur source and to transport and metabolize alternate sulfur sources. The utilization process begins when the cell or organism detects sulfur levels, includes the activation of genes whose products detect, transport or metabolize sulfur-containing compounds, and ends when the sulfur is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfur utilization","synonyms":[{"name":"sulphur utilization","type":"exact"}],"termid":"GO:0006791"}


id: PBO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A","termid":"PBO:0070440"}


id: MONDO:0019012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare autosomal recessive syndrome characterized by premature closure of cranial sutures leading to cone-shaped head, fusion of the digits, and the presence of more digits than normal. It may be associated with heart defects, single horseshoe-shaped kidney, short stature, undescended testes, and mild mental retardation.","definition_xrefs":["NCIT:C98873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Carpenter syndrome","secondary_identifiers":["SCTID:403767009","Orphanet:65759","OMIMPS:201000","DOID:0060234","GARD:6003","icd11.foundation:2132713612","NORD:897","MEDGEN:226897","SCTID:83728000","UMLS:C1275078","NANDO:2200847"],"synonyms":[{"name":"ACPS2","type":"exact"},{"name":"Carpenter 's syndrome","type":"exact"},{"name":"Carpenter syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 2","type":"exact"},{"name":"acrocephalopolysyndactyly type II","type":"exact"},{"name":"acrocephalosyndactyly, type II","type":"related"},{"name":"type II Acrocephalopolysyndactyly","type":"exact"}],"termid":"MONDO:0019012","xrefs":{"Monarch":{"xref_id":"0019012"}}}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: MONDO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor that arises from the colon and produces glucagon-like peptides. Morphologically, it is characterized by the presence of neoplastic cells forming tubular or trabecular patterns.","definition_xrefs":["NCIT:C27447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cell glucagon-like peptide-producing neuroendocrine tumor","termid":"MONDO:0004211"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the colon, well differentiated, low or intermediate grade tumor","termid":"MONDO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic L-cell glucagon-like peptide producing tumor","secondary_identifiers":["UMLS:C3274139","MEDGEN:475772","DOID:7401"],"synonyms":[{"name":"L-cell glucagon-like peptide-producing neuroendocrine tumor of colon","type":"exact"},{"name":"L-cell glucagon-like peptide-producing neuroendocrine tumour of colon","type":"exact"},{"name":"colon L-cell glucagon-like peptide-producing NET","type":"exact"},{"name":"colon L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"exact"},{"name":"colon L-cell glucagon-like peptide-producing neuroendocrine tumour","type":"exact"},{"name":"colonic L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"exact"},{"name":"colonic L-cell glucagon-like peptide-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0004210","xrefs":{"Monarch":{"xref_id":"0004210"}}}


id: PATO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductivity","termid":"PATO:0001585"}


id: PBO:0083617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes","termid":"PBO:0083617"}


id: MONDO:1010818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in Western roe deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, Western roe deer","secondary_identifiers":["OMIA:000810-9858"],"termid":"MONDO:1010818","xrefs":{"Monarch":{"xref_id":"1010818"}}}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: FYPO:0002253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal septum location","synonyms":[{"name":"normal septum location during mitotic cell cycle","type":"related"},{"name":"normal septum location during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"},{"name":"normally localized septum","type":"exact"}],"termid":"FYPO:0002253"}


id: FYPO:0001624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar asparagine level","synonyms":[{"name":"normal level of asparagine in vacuole","type":"exact"},{"name":"normal vacuolar L-asparagine level","type":"exact"},{"name":"normal vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001624"}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: PBO:0034611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_morphology_during_meiosis_I","termid":"PBO:0034611"}


id: MONDO:0022418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alopecia immunodeficiency (obsolete MONDO:0022418)","termid":"MONDO:0022418","xrefs":{"Monarch":{"xref_id":"0022418"}}}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: GO:0003961
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-homoserine + methanethiol = L-methionine + acetate. Also reacts with other thiols and H2S, producing homocysteine or thioethers.","definition_xrefs":["EC:2.5.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"O-acetylhomoserine aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019282","MetaCyc:O-ACETYLHOMOSERINE-THIOL-LYASE-RXN"],"synonyms":[{"name":"L-methionine anabolism, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine formation, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine synthesis, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"O-acetyl-L-homoserine acetate-lyase (adding methanethiol) activity","type":"related"},{"name":"O-acetyl-L-homoserine sulfhydrolase activity","type":"related"},{"name":"O-acetyl-L-homoserine:methanethiol 3-amino-3-carboxypropyltransferase activity","type":"related"},{"name":"O-acetylhomoserine (thiol)-lyase activity","type":"exact"},{"name":"O-acetylhomoserine sulfhydrolase activity","type":"related"},{"name":"OAH sulfhydrylase activity","type":"related"},{"name":"methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"}],"termid":"GO:0003961","terms_by_termid":{"GO:0051009":null}}


id: MONDO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the tibialis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tibialis tendinitis","secondary_identifiers":["SCTID:50127006","UMLS:C0158321","DOID:10810","ICD9:726.72","MEDGEN:510515"],"synonyms":[{"name":"tendinitis of tibialis","type":"exact"},{"name":"tibialis tendinitis","type":"exact"}],"termid":"MONDO:0001127","xrefs":{"Monarch":{"xref_id":"0001127"}}}


id: GO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup structural organization","synonyms":[{"name":"optic cup structural organisation","type":"exact"}],"termid":"GO:0003409"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:22100522","PMID:30205156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: PBO:0017711
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF7","termid":"PBO:0017711"}


id: SO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UST located in the 3'UTR of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UST","termid":"SO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UST","synonyms":[{"name":"3' UST","type":"related"}],"termid":"SO:0001465"}


id: PBO:0031805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1/S_phase_transition","termid":"PBO:0031805"}


id: GO:0120120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal structure in some kinetoplastid species linking the structures of the ciliary pocket collar and the flagellum attachment zone (aka cilium attachment zone).","definition_xrefs":["PMID:22327007","PMID:22445359","PMID:26540076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bilobe structure","synonyms":[{"name":"kinetoplastid flagellar hook complex","type":"exact"}],"termid":"GO:0120120"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: MONDO:0005284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of multiple sclerosis characterized by a progressive deterioration in neurologic function which is in contrast to the more typical relapsing remitting form. If the clinical course is free of distinct remissions, it is referred to as primary progressive multiple sclerosis. When the progressive decline is punctuated by acute exacerbations, it is referred to as progressive relapsing multiple sclerosis. The term secondary progressive multiple sclerosis is used when relapsing remitting multiple sclerosis evolves into the chronic progressive form. (From Ann Neurol 1994;36 Suppl:S73-S79; Adams et al., Principles of Neurology, 6th ed, pp903-914)","definition_xrefs":["MESH:D020528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"chronic progressive multiple sclerosis","secondary_identifiers":["EFO:0003840","MEDGEN:140733","SCTID:230373008","UMLS:C0393665"],"termid":"MONDO:0005284","xrefs":{"Monarch":{"xref_id":"0005284"}}}


id: PBO:0079130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase substrate","termid":"PBO:0079130"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: MONDO:0015225
data:
  {"annotated_genes":["SJAG_01863","SJAG_03847","SJAG_00773","SJAG_03703","SJAG_03379","SJAG_02096","SJAG_04697","SJAG_05194","SJAG_01665","SJAG_02431","SJAG_00853","SJAG_00875","SJAG_03106","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[86489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[85660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030847"},{"annotations":[87090,87089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"},{"annotations":[86496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[87096,87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[87122,87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[86091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[87136,87135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[85940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[86145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[85447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[85772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[85771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[85640,85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00853":null,"SJAG_00875":null,"SJAG_01065":null,"SJAG_01665":null,"SJAG_01863":null,"SJAG_02096":null,"SJAG_02431":null,"SJAG_03106":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_03847":null,"SJAG_04697":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1692487835","GARD:19870","MESH:D001176","Orphanet:109007"],"synonyms":[{"name":"arthrogryposis syndrome","type":"exact"}],"termid":"MONDO:0015225","terms_by_termid":{"MONDO:0008016":null,"MONDO:0008338":null,"MONDO:0008675":null,"MONDO:0008822":null,"MONDO:0009670":null,"MONDO:0010532":null,"MONDO:0012656":null,"MONDO:0012750":null,"MONDO:0014248":null,"MONDO:0014552":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0020746":null,"MONDO:0030281":null,"MONDO:0030847":null,"MONDO:0032751":null,"MONDO:0032903":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0015225"}}}


id: PBO:0043168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage intermediate layer protein","termid":"PBO:0043168"}


id: FYPO:0003649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing hypoxanthine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on hypoxanthine nitrogen source","synonyms":[{"name":"abolished growth on hypoxanthine nitrogen source","type":"broad"},{"name":"abolished hypoxanthine utilization","type":"related"},{"name":"abolished vegetative cell population growth on hypoxanthine nitrogen source","type":"exact"},{"name":"cell population growth on hypoxanthine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0003649"}


id: GO:0080159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the zygote irreversibly increases in size in one dimension after fertilization. An example of such a process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygote elongation","termid":"GO:0080159"}


id: MONDO:1010611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis, non-human animal","termid":"MONDO:1010059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis, dog","secondary_identifiers":["OMIA:001005-9615"],"termid":"MONDO:1010611","xrefs":{"Monarch":{"xref_id":"1010611"}}}


id: PBO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 4","termid":"PBO:0046167"}


id: MONDO:0033334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic nose and cavum anomaly (obsolete MONDO:0033334)","secondary_identifiers":["Orphanet:435606"],"termid":"MONDO:0033334","xrefs":{"Monarch":{"xref_id":"0033334"}}}


id: PBO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh201 (predicted)","termid":"PBO:0001448"}


id: PBO:0066665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 2","termid":"PBO:0066665"}


id: PBO:0028825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_migration_during_mating","termid":"PBO:0028825"}


id: PATO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"back","termid":"PATO:0001901"}


id: PBO:0048087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: PBO:0076615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A","termid":"PBO:0076615"}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dh","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","secondary_identifiers":["Reactome:R-HSA-112308"],"termid":"GO:0051899"}


id: PATO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation reflective quality inhering in a bearer by virtue of the ratio of the energy of a wave reflected from its surface to the energy possessed by the wave striking the bearer's surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reflectivity","termid":"PATO:0001297"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["PMID:10662642","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0040831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIRC6 antisense RNA 1","termid":"PBO:0040831"}


id: PBO:0090955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human RNF13 family homolog, unknown biological role","termid":"PBO:0090955"}


id: GO:0042376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phylloquinone, vitamin K1, a quinone-derived compound synthesized by green plants.","definition_xrefs":["GOC:jl","PMID:27337968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phylloquinone metabolic process","termid":"GO:0042374"},{"relation_name":"is_a","term_name":"vitamin K catabolic process","termid":"GO:0042377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phylloquinone catabolic process","synonyms":[{"name":"phylloquinone breakdown","type":"exact"},{"name":"phylloquinone catabolism","type":"exact"},{"name":"phylloquinone degradation","type":"exact"},{"name":"phytomenadione catabolic process","type":"exact"},{"name":"phytomenadione catabolism","type":"exact"},{"name":"phytonadione catabolic process","type":"exact"},{"name":"phytonadione catabolism","type":"exact"},{"name":"phytylmenaquinone catabolic process","type":"exact"},{"name":"phytylmenaquinone catabolism","type":"exact"},{"name":"vitamin K1 catabolic process","type":"exact"},{"name":"vitamin K1 catabolism","type":"exact"}],"termid":"GO:0042376"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: PBO:0085073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-transcribed region of the rDNA repeat between the 3'ETS and RDN5; required for rDNA repeat expansion; contains RNA polymerase I termination site","termid":"PBO:0085073"}


id: GO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid biosynthetic process (obsolete GO:0046145)","synonyms":[{"name":"D-alanine family amino acid anabolism","type":"exact"},{"name":"D-alanine family amino acid biosynthesis","type":"exact"},{"name":"D-alanine family amino acid formation","type":"exact"},{"name":"D-alanine family amino acid synthesis","type":"exact"}],"termid":"GO:0046145"}


id: PBO:0085089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein that acts as a recycling factor; mediates the nuclear export of Srp1p (importin alpha) back to the cytoplasm after its import substrates have been released into the nucleoplasm, thereby allowing the participation of Srp1p in multiple rounds of nuclear import; required for accurate chromosome segregation; homolog of metazoan CAS and human CSE1L, overexpression of which is implicated in cancer progression","termid":"PBO:0085089"}


id: PBO:0040031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMCX5-GPRASP2 readthrough","termid":"PBO:0040031"}


id: GO:0021803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a long process to the pial surface as a cell leaves the ventricular zone.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extension of leading cell process to pial surface","termid":"GO:0021803"}


id: PR:Q9P7H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C105.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.03c","synonyms":[{"name":"Spom972h-SPAC105.03c","type":"exact"}],"termid":"PR:Q9P7H9"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80386],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"},{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24400","MetaCyc:2.7.4.22-RXN"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: MONDO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm originating in the central nervous system or the meninges and showing fibrous, fibrohistiocytic, adipose, myoid, endothelial, chondroid or osseous, but not meningothelial differentiation. Depending on the histological features and clinical behavior of these neoplasms, their grade ranges from benign (WHO grade I) to highly malignant (WHO grade IV). (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system mesenchymal non-meningothelial tumor","secondary_identifiers":["UMLS:C1332893","DOID:502","MEDGEN:234104","NCIT:C5449"],"synonyms":[{"name":"CNS soft tissue neoplasm","type":"exact"},{"name":"CNS soft tissue tumor","type":"exact"},{"name":"CNS soft tissue tumour","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial neoplasm","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial tumor","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial tumour","type":"exact"},{"name":"central nervous system soft tissue neoplasm","type":"exact"},{"name":"central nervous system soft tissue tumor","type":"exact"},{"name":"central nervous system soft tissue tumour","type":"exact"},{"name":"mesenchymal non-meningothelial tumor of the central nervous system","type":"exact"},{"name":"mesenchymal non-meningothelial tumour of the central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of the CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of the CNS","type":"exact"},{"name":"non-meningothelial mesenchymal tumor","type":"exact"},{"name":"non-meningothelial mesenchymal tumour","type":"exact"},{"name":"soft tissue neoplasm of CNS","type":"exact"},{"name":"soft tissue neoplasm of central nervous system","type":"exact"},{"name":"soft tissue neoplasm of the CNS","type":"exact"},{"name":"soft tissue neoplasm of the central nervous system","type":"exact"},{"name":"soft tissue tumor of CNS","type":"exact"},{"name":"soft tissue tumor of central nervous system","type":"exact"},{"name":"soft tissue tumor of the CNS","type":"exact"},{"name":"soft tissue tumor of the central nervous system","type":"exact"},{"name":"soft tissue tumour of CNS","type":"exact"},{"name":"soft tissue tumour of central nervous system","type":"exact"},{"name":"soft tissue tumour of the CNS","type":"exact"},{"name":"soft tissue tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0003244","xrefs":{"Monarch":{"xref_id":"0003244"}}}


id: PR:O14351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-xylulose reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C30D10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.05c","secondary_identifiers":["UniProtKB:O14351"],"synonyms":[{"name":"Spom972h-DCXR","type":"exact"}],"termid":"PR:O14351"}


id: PBO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 6","termid":"PBO:0045584"}


id: PR:Q9P794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp103 gene.","definition_xrefs":["UniProtKB:Q9P794","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.09","synonyms":[{"name":"Spom972h-usp103","type":"exact"},{"name":"U1 snRNP C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P794"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PBO:0110287
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in metozoa","termid":"PBO:0110287"}


id: GO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticotropin-releasing hormone","termid":"GO:0043435"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticotropin-releasing hormone stimulus","synonyms":[{"name":"cellular response to CRF stimulus","type":"exact"},{"name":"cellular response to CRH stimulus","type":"exact"},{"name":"cellular response to corticoliberin stimulus","type":"exact"},{"name":"cellular response to corticotropin-releasing factor stimulus","type":"exact"}],"termid":"GO:0071376"}


id: PBO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_rate","termid":"PBO:0030278"}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: GO:0006581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine, the acetic acid ester of the organic base choline.","definition_xrefs":["ISBN:0192800752","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine metabolic process","termid":"GO:0008291"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine catabolic process","synonyms":[{"name":"acetylcholine breakdown","type":"exact"},{"name":"acetylcholine catabolism","type":"exact"},{"name":"acetylcholine degradation","type":"exact"}],"termid":"GO:0006581"}


id: GO:1990011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inclusion body characterized by regularly spaced sheets of tubules arranged in a whorl pattern resembling a fingerprint. Laminated bodies have been observed in neurons of the lateral geniculate nucleus.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao506721981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"laminated body","synonyms":[{"name":"laminated inclusion body","type":"exact"}],"termid":"GO:1990011"}


id: PBO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 20","termid":"PBO:0050242"}


id: MONDO:0008176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"Paget disease of bone 3","secondary_identifiers":["MEDGEN:895927","UMLS:C4085252","DOID:0081366","OMIM:167250"],"synonyms":[{"name":"PDB3","type":"related"},{"name":"Paget disease of bone 3","type":"exact"},{"name":"Paget disease of bone type 3","type":"exact"},{"name":"Paget disease of bone, familial","type":"related"},{"name":"familial Paget disease of bone","type":"related"}],"termid":"MONDO:0008176","xrefs":{"Monarch":{"xref_id":"0008176"}}}


id: PBO:0080970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8B","termid":"PBO:0080970"}


id: PBO:0053267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A1","termid":"PBO:0053267"}


id: PBO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCTC-binding factor","termid":"PBO:0044148"}


id: MONDO:0018558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","secondary_identifiers":["Orphanet:434809"],"termid":"MONDO:0018558","xrefs":{"Monarch":{"xref_id":"0018558"}}}


id: GO:1903212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating-type region heterochromatin.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:18761674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mating-type region heterochromatin","synonyms":[{"name":"protein localisation in mating-type region heterochromatin","type":"exact"},{"name":"protein localisation to mating-type region heterochromatin","type":"exact"},{"name":"protein localization in mating-type region heterochromatin","type":"exact"}],"termid":"GO:1903212"}


id: MONDO:0013011
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85301],"is_not":false,"summary":null,"term":"MONDO:0013011"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the ACTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:412580","OMIM:612794","UMLS:C2748552","MESH:C567561","DOID:0110110"],"synonyms":[{"name":"ACTC1 atrial heart septal defect","type":"exact"},{"name":"ASD5","type":"exact"},{"name":"atrial heart septal defect caused by mutation in ACTC1","type":"exact"},{"name":"atrial heart septal defect type 5","type":"exact"},{"name":"atrial septal defect 5","type":"exact"},{"name":"atrial septal defect type 5","type":"exact"}],"termid":"MONDO:0013011","terms_by_termid":{"MONDO:0013011":null},"xrefs":{"Monarch":{"xref_id":"0013011"}}}


id: GO:0030810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"positively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleotide biosynthetic process","synonyms":[{"name":"activation of nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of nucleotide anabolism","type":"exact"},{"name":"positive regulation of nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of nucleotide formation","type":"exact"},{"name":"positive regulation of nucleotide synthesis","type":"exact"},{"name":"stimulation of nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030810"}


id: PBO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell","termid":"PBO:0030209"}


id: PBO:0077549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 2","termid":"PBO:0077549"}


id: GO:0014917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which pressure natriuresis increases the rate of diuresis.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis by pressure natriuresis (obsolete GO:0014917)","synonyms":[{"name":"positive regulation of diuresis by pressure natriuresis","type":"exact"}],"termid":"GO:0014917"}


id: FYPO:0003206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to salt stress. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to salt stress","synonyms":[{"name":"decreased protein binding during cellular response to salt stress","type":"exact"},{"name":"decreased protein-protein interaction during salt stress","type":"exact"},{"name":"decreased protein-protein interaction in response to salt stress","type":"related"},{"name":"reduced protein-protein interaction during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003206"}


id: PBO:0071029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 31","termid":"PBO:0071029"}


id: GO:0033462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"GGC codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033462"}


id: PBO:0082409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family transcriptional regulator; associates with TFIID, and is involved in transcription initiation at TATA-containing promoters; essential for meiosis and expression of meiosis-specific genes;  binds acetylated histone H4 at double-strand break (DSB) sites, and promotes end resection, loading of RPA and Rad51p and ds break repair by homologous recombination; contains two bromodomains that correspond to the C-terminal region of mammalian TAF1; partially redundant with paralog Bdf2p","termid":"PBO:0082409"}


id: GO:1900164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding to an activin receptor on the surface of a target cell, which contributes to the establishment of lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900164)","synonyms":[{"name":"nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900164"}


id: GO:0050561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Glx) + L-glutamate + ATP = glutamyl-tRNA(Glx) + diphosphate + AMP.","definition_xrefs":["MetaCyc:6.1.1.24-RXN","EC:6.1.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"glutamate-tRNA(Gln) ligase activity","secondary_identifiers":["RHEA:18397"],"synonyms":[{"name":"L-glutamate:tRNAGlx ligase (AMP-forming)","type":"related"},{"name":"glutamate-tRNAGln ligase activity","type":"exact"},{"name":"nondiscriminating glutamyl-tRNA synthetase activity","type":"related"}],"termid":"GO:0050561"}


id: PBO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3","termid":"PBO:0047814"}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: PBO:0087379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding protein; has a probable role in retrograde transport of sterols from the plasma membrane to the ER; contains two StART-like domains that bind sterols and a GRAM domain; co-localizes to puncta in the cortical ER with Sip3p; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes","termid":"PBO:0087379"}


id: GO:0045563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor biosynthetic process (obsolete GO:0045563)","synonyms":[{"name":"down regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor formation","type":"exact"},{"name":"negative regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045563"}


id: PBO:0085472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Presumed antiporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles","termid":"PBO:0085472"}


id: PR:O36019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg13 gene.","definition_xrefs":["UniProtKB:O36019","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.07c","synonyms":[{"name":"Spom972h-atg13","type":"exact"},{"name":"meiotically up-regulated gene 78 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36019"}


id: PBO:0082299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; catalyzes the first step of tryptophan, phenylalanine, and tyrosine catabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082299"}


id: PBO:0082470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; may play a role in stress response, many Ca++/calmodulin dependent phosphorylation substrates demonstrated in vitro, amino acid sequence similar to mammalian Cam Kinase II; CMK1 has a paralog, CMK2, that arose from the whole genome duplication","termid":"PBO:0082470"}


id: PBO:0068433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 3","termid":"PBO:0068433"}


id: MONDO:0015961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary head and neck malformation (obsolete MONDO:0015961)","secondary_identifiers":["Orphanet:183583"],"synonyms":[{"name":"genetic head and neck malformation","type":"exact"}],"termid":"MONDO:0015961","xrefs":{"Monarch":{"xref_id":"0015961"}}}


id: GO:1904466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GOC:TermGenie","PMID:8679543","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"positively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of matrix metallopeptidase secretion","synonyms":[{"name":"activation of MMP secretion","type":"narrow"},{"name":"activation of matrix metallopeptidase secretion","type":"narrow"},{"name":"activation of matrix metalloproteinase secretion","type":"narrow"},{"name":"positive regulation of MMP secretion","type":"exact"},{"name":"positive regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up regulation of MMP secretion","type":"exact"},{"name":"up regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up-regulation of MMP secretion","type":"exact"},{"name":"up-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"upregulation of MMP secretion","type":"exact"},{"name":"upregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"upregulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904466"}


id: PBO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Swi6","termid":"PBO:0001130"}


id: MONDO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otospondylomegaepiphyseal dysplasia","termid":"MONDO:0008975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","secondary_identifiers":["MEDGEN:1790497","UMLS:C5551484","OMIM:215150"],"synonyms":[{"name":"Nance-Insley syndrome","type":"related"},{"name":"Nance-Sweeney chondrodysplasia","type":"related"},{"name":"OSMED","type":"related"},{"name":"OSMEDB","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome, formerly","type":"related"},{"name":"chondrodystrophy with sensorineural deafness","type":"related"},{"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","type":"exact"}],"termid":"MONDO:0044206","xrefs":{"Monarch":{"xref_id":"0044206"}}}


id: PBO:0068695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 76, pseudogene","termid":"PBO:0068695"}


id: PBO:0080977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB11 antisense RNA 1","termid":"PBO:0080977"}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: GO:1900006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite development","synonyms":[{"name":"up regulation of dendrite development","type":"related"}],"termid":"GO:1900006"}


id: _global:causally_influenced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_entities","termid":"_global:causal_relation_between_entities"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","secondary_identifiers":["RO:0002559"],"termid":"_global:causally_influenced_by"}


id: MONDO:0011846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bulimia nervosa","termid":"MONDO:0005452"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa, susceptibility to, 1","secondary_identifiers":["UMLS:C1843776","OMIM:607499","MEDGEN:334832"],"synonyms":[{"name":"BN","type":"related"},{"name":"BULN","type":"related"},{"name":"BULN1","type":"exact"},{"name":"BULN2","type":"related"},{"name":"anorexia nervosa, susceptibility to, 2","type":"related"},{"name":"bulimia nervosa, susceptibility to","type":"broad"},{"name":"bulimia nervosa, susceptibility to, 1","type":"exact"},{"name":"bulimia nervosa, susceptibility to, 2","type":"exact"},{"name":"bulimia nervosa, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to bulimia nervosa 2","type":"exact"}],"termid":"MONDO:0011846","xrefs":{"Monarch":{"xref_id":"0011846"}}}


id: MONDO:0800328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 94, variable age at onset","secondary_identifiers":["MEDGEN:1805655","UMLS:C5676889"],"synonyms":[{"name":"RP94","type":"exact"}],"termid":"MONDO:0800328","xrefs":{"Monarch":{"xref_id":"0800328"}}}


id: PBO:0063789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 14","termid":"PBO:0063789"}


id: FYPO:0002420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce cell that has an abnormal shape and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002420"}


id: MONDO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor G1","secondary_identifiers":["UMLS:C1335678","SCTID:713306000","MEDGEN:233389"],"synonyms":[{"name":"carcinoid of rectum","type":"exact"},{"name":"carcinoid of the rectum","type":"exact"},{"name":"carcinoid tumor of rectum","type":"exact"},{"name":"carcinoid tumor of the rectum","type":"exact"},{"name":"carcinoid tumour of rectum","type":"exact"},{"name":"carcinoid tumour of the rectum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of rectum","type":"exact"},{"name":"rectal NET G1","type":"exact"},{"name":"rectal carcinoid","type":"exact"},{"name":"rectal carcinoid tumor","type":"exact"},{"name":"rectal carcinoid tumour","type":"exact"},{"name":"rectal neuroendocrine tumor G1","type":"exact"},{"name":"rectum NET G1","type":"exact"},{"name":"rectum carcinoid tumor","type":"exact"},{"name":"rectum carcinoid tumor (disease)","type":"exact"},{"name":"rectum carcinoid tumour","type":"exact"},{"name":"rectum carcinoid tumour (disease)","type":"exact"},{"name":"rectum neuroendocrine neoplasm G1","type":"exact"},{"name":"rectum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0021534","xrefs":{"Monarch":{"xref_id":"0021534"}}}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: MONDO:0019782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-ulnar synostosis","secondary_identifiers":["GARD:19244","UMLS:C0431799","icd11.foundation:2144695561","Orphanet:94056","MEDGEN:451053"],"synonyms":[{"name":"humero-ulnar fusion","type":"exact"}],"termid":"MONDO:0019782","xrefs":{"Monarch":{"xref_id":"0019782"}}}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: PBO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus (mat1-Pi). The pombe sequence reference strain is h-, therefore annotations are attached to this gene and not mat1-Pi","termid":"PBO:0016121"}


id: PBO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 3 member A","termid":"PBO:0043276"}


id: MONDO:0023388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rotunda is a rare skindisease characterized by round, scaly, pigmented patches that mainly occur on the trunk, arms and legs. There are two types of pityriasis rotunda.","definition_xrefs":["GARD:0010904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis rotunda","secondary_identifiers":["icd11.foundation:873448556","UMLS:C0343060","SCTID:238639005","GARD:10904","MEDGEN:575364"],"synonyms":[{"name":"Pityriasis rotunda","type":"related"}],"termid":"MONDO:0023388","xrefs":{"Monarch":{"xref_id":"0023388"}}}


id: PBO:0088019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type V myosin motor involved in actin-based transport of cargos; required for the polarized delivery of secretory vesicles, the vacuole, late Golgi elements, peroxisomes, lipid droplets, and the mitotic spindle; MYO2 has a paralog, MYO4, that arose from the whole genome duplication","termid":"PBO:0088019"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: GO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cobalamin binding","synonyms":[{"name":"vitamin B12 binding","type":"exact"}],"termid":"GO:0031419"}


id: MONDO:0020383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fundus pulverulentus is a rare form of patterned dystrophy of the retinal pigment epithelium characterized by a granular appearance in the macula, with coarse and punctiform mottling of the retinal pigment epithelium within the macular region. Association with choroidal neovascularization has been reported.","definition_xrefs":["Orphanet:99004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fundus pulverulentus","secondary_identifiers":["MEDGEN:1669231","UMLS:C4749286","ICD10CM:H35.5","GARD:19613","icd11.foundation:871251875"],"termid":"MONDO:0020383","xrefs":{"Monarch":{"xref_id":"0020383"}}}


id: PBO:0081614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 542, pseudogene","termid":"PBO:0081614"}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: GO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-glutamate import across plasma membrane","termid":"GO:0002037"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"negatively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of glutamate reuptake","type":"exact"},{"name":"negative regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of glutamate uptake involved in conduction of nerve impulse","type":"related"}],"termid":"GO:0051948"}


id: PBO:0040617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 2","termid":"PBO:0040617"}


id: GO:0009266
data:
  {"annotated_genes":["SJAG_03527","SJAG_02381","SJAG_02426","SJAG_01186","SJAG_04187","SJAG_04055","SJAG_03949","SJAG_01584","SJAG_04082","SJAG_03319","SJAG_00436","SJAG_04388","SJAG_04567","SJAG_02266","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78941,104322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[115522,105007,105293,88795,92053,90774,100536,96456,110019,115523,95664,110020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[90775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[73066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to temperature stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"response to thermal stimulus","type":"exact"}],"termid":"GO:0009266","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null,"GO:0071502":null}}


id: GO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fucose catabolic process","secondary_identifiers":["MetaCyc:FUCCAT-PWY"],"synonyms":[{"name":"fucose breakdown","type":"exact"},{"name":"fucose catabolism","type":"exact"},{"name":"fucose degradation","type":"exact"}],"termid":"GO:0019317"}


id: PR:Q9HDW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03262","PANTHER:PTHR12586:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP18G5.02","secondary_identifiers":["UniProtKB:Q9HDW1"],"synonyms":[{"name":"PGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGS1","type":"exact"},{"name":"phosphatidylglycerophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW1"}


id: PBO:0089879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc4","termid":"PBO:0089879"}


id: FYPO:0008337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a lower extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008337"}


id: PBO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cip2","termid":"PBO:0000301"}


id: GO:0007593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening of a chitin-based cuticle.","definition_xrefs":["GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization","secondary_identifiers":["GO:0045452"],"synonyms":[{"name":"chitin-based cuticle tanning","type":"related"},{"name":"cuticle hardening","type":"narrow"}],"termid":"GO:0007593"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: CHEBI:338412
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomycin","termid":"CHEBI:338412"}


id: MONDO:0009055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis marmorata telangiectatica congenita (CMTC) is a congenital localized or generalized vascular anomaly characterized by a persistent cutis marmorata pattern with a marbled bluish to deep purple appearance, spider nevus-like telangiectasia, phlebectasia and, occasionally, ulceration and atrophy of the affected skin.","definition_xrefs":["Orphanet:1556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutis marmorata telangiectatica congenita","secondary_identifiers":["OMIM:219250","UMLS:C0345419","MEDGEN:83381","icd11.foundation:1359154853","ICD9:757.8","HP:0025107","MESH:C536226","GARD:6228","SCTID:254778000"],"synonyms":[{"name":"CMTC","type":"exact"},{"name":"Van Lohuizen syndrome","type":"related"},{"name":"cutis marmorata telangiectatica congenita","type":"exact"},{"name":"cutis marmorata telangiectatica congenita (disease)","type":"exact"},{"name":"hereditary cutis marmorata telangiectatica congenita","type":"related"}],"termid":"MONDO:0009055","xrefs":{"Monarch":{"xref_id":"0009055"}}}


id: PBO:0038594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase long chain","termid":"PBO:0038594"}


id: PBO:0040942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 13","termid":"PBO:0040942"}


id: GO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel complex","termid":"GO:0062157"}


id: PBO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HXK1","termid":"PBO:0000392"}


id: PR:Q10444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exg2 gene.","definition_xrefs":["UniProtKB:Q10444","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.11","synonyms":[{"name":"Exo-1,3-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-exg2","type":"exact"}],"termid":"PR:Q10444"}


id: PBO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Nto1 (predicted)","termid":"PBO:0004453"}


id: PBO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf21","termid":"PBO:0005744"}


id: PR:P05501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05077","PANTHER:PTHR19271:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.05","secondary_identifiers":["UniProtKB:P05501"],"synonyms":[{"name":"Spom972h-MT-CYB","type":"exact"},{"name":"complex III subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome b subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05501"}


id: GO:0097016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner.","definition_xrefs":["PMID:15241471","PMID:17237226","GOC:BHF","Prosite:PDOC51022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"L27 domain binding","termid":"GO:0097016"}


id: GO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + aminotriazole(in) = H+(in) + aminotriazole(out).","definition_xrefs":["TC:2.A.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"aminotriazole transmembrane transporter activity","termid":"GO:1901478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"aminotriazole:proton antiporter activity","synonyms":[{"name":"aminotriazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015314"}


id: GO:0048692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon extension","termid":"GO:0030517"},{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"negatively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon extension involved in regeneration","synonyms":[{"name":"down regulation of axon extension involved in regeneration","type":"exact"},{"name":"down-regulation of axon extension involved in regeneration","type":"exact"},{"name":"downregulation of axon extension involved in regeneration","type":"exact"},{"name":"inhibition of axon extension involved in regeneration","type":"narrow"}],"termid":"GO:0048692"}


id: PBO:0042395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD320 molecule","termid":"PBO:0042395"}


id: PBO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase activator Atg17","termid":"PBO:0000851"}


id: PBO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion_during_vegetative_growth","termid":"PBO:0035899"}


id: GO:0075264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oogonium development","termid":"GO:0075264"}


id: MONDO:0026763
data:
  {"annotated_genes":["SJAG_03418","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85856,85857],"is_not":false,"summary":null,"term":"MONDO:0026763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 13, X-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5393308","MEDGEN:1714826","DOID:0060954","OMIM:301043"],"synonyms":[{"name":"HOLOPROSENCEPHALY 13, X-LINKED","type":"related"},{"name":"HPE13","type":"related"},{"name":"holoprosencephaly 13, X-linked, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0026763","terms_by_termid":{"MONDO:0026763":null},"xrefs":{"Monarch":{"xref_id":"0026763"}}}


id: PBO:0114426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC6 antisense RNA 1","termid":"PBO:0114426"}


id: PBO:0075563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 2","termid":"PBO:0075563"}


id: GO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC class Ib protein complex on its cell surface. The peptide antigen may originate from an endogenous or exogenous protein. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002428"}


id: PBO:0069914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1206, pseudogene","termid":"PBO:0069914"}


id: PBO:0084202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; converts HMG-CoA to mevalonate, a rate-limiting step in sterol biosynthesis; one of two isozymes; overproduction induces assembly of peripheral ER membrane arrays and short nuclear-associated membrane stacks; forms foci at nuclear periphery upon DNA replication stress; HMG2 has a paralog, HMG1, that arose from the whole genome duplication; human homolog HMGCR can complement yeast hmg2 mutant","termid":"PBO:0084202"}


id: PBO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucosyltransferase_activity","termid":"PBO:0030716"}


id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: MONDO:0008418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"scleroderma, familial progressive","secondary_identifiers":["UMLS:C1866983","MEDGEN:356661","OMIM:181750"],"synonyms":[{"name":"Crest syndrome","type":"related"},{"name":"scleroderma, familial progressive","type":"exact"},{"name":"systemic sclerosis, susceptibility to","type":"related"}],"termid":"MONDO:0008418","xrefs":{"Monarch":{"xref_id":"0008418"}}}


id: _global:has_integral_part
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X has_integral_part Y if and only if: X has_part Y and Y part_of X.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_integral_part","termid":"_global:has_integral_part"}


id: GO:1903385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["PMID:21724833","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of homophilic cell adhesion","termid":"GO:1903385"}


id: FYPO:0004798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:25891897","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished azygotic meiosis II","synonyms":[{"name":"abolished azygotic second meiotic nuclear division","type":"exact"},{"name":"abolished meiosis II during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004798"}


id: MONDO:1012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor syndrome with central axonopathy, non-human animal","termid":"MONDO:1011862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor syndrome with central axonopathy, dog","secondary_identifiers":["OMIA:001017-9615"],"termid":"MONDO:1012283","xrefs":{"Monarch":{"xref_id":"1012283"}}}


id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: MONDO:0700277
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030677"},{"annotations":[85490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3B-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700277","terms_by_termid":{"MONDO:0013722":null,"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0700277"}}}


id: MONDO:0011387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 4, susceptibility to","secondary_identifiers":["DOID:0111280","UMLS:C1858958","OMIM:603935","MEDGEN:347765"],"synonyms":[{"name":"PSORS4","type":"exact"},{"name":"psoriasis 4, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 4","type":"exact"}],"termid":"MONDO:0011387","xrefs":{"Monarch":{"xref_id":"0011387"}}}


id: PR:O74534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sec1 family domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04874","PANTHER:PTHR11679:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sly1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.01","secondary_identifiers":["UniProtKB:O74534"],"synonyms":[{"name":"Spom972h-SCFD1","type":"exact"}],"termid":"PR:O74534"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of single-stranded telomeric DNA binding (obsolete GO:0060380)","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: PBO:0088957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0088957"}


id: PBO:0082604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cobalamin-independent methionine synthase; involved in methionine biosynthesis and regeneration; requires a minimum of two glutamates on the methyltetrahydrofolate substrate, similar to bacterial metE homologs","termid":"PBO:0082604"}


id: MONDO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive inflammation and damage to tissues around the eyes, especially extraocular muscle, connective, and fatty tissue occurring in patients with hyperthyroidism or a history of hyperthyroidism due to Graves’ disease.","definition_xrefs":["PMID:20181974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine exophthalmos","secondary_identifiers":["ICD9:376.2","SCTID:276177000","UMLS:C0155264","MEDGEN:509882","DOID:12359"],"synonyms":[{"name":"Graves’ eye disease","type":"exact"},{"name":"Graves’ ophthalmopathy","type":"exact"},{"name":"Graves’ orbitopathy","type":"exact"},{"name":"TED","type":"exact"},{"name":"thyroid eye disease","type":"exact"},{"name":"thyroid-associated ophthalmopathy","type":"exact"}],"termid":"MONDO:0001509","xrefs":{"Monarch":{"xref_id":"0001509"}}}


id: PBO:0076151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA:glutarate-CoA transferase","termid":"PBO:0076151"}


id: MONDO:0022465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by anotia (congenital absence of the pinna) with a normal cochlea and vestibular apparatus, with facial paralysis caused by congenital absence of the entire right facial nerve, and congenital heart disease, which may present as atrioventricular septal defects or variations of tetralogy of Fallot.","definition_xrefs":["PMID:6470867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia facial palsy cardiac defect","termid":"MONDO:0022465","xrefs":{"Monarch":{"xref_id":"0022465"}}}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: MONDO:1010885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the TPP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, TPP1-related, dog","secondary_identifiers":["OMIA:001472-9615"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 2, dog","type":"related"}],"termid":"MONDO:1010885","xrefs":{"Monarch":{"xref_id":"1010885"}}}


id: PBO:0083004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Arabinono-1,4-lactone oxidase; catalyzes the final step in biosynthesis of dehydro-D-arabinono-1,4-lactone, which is protective against oxidative stress","termid":"PBO:0083004"}


id: GO:0004081
data:
  {"annotated_genes":["SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78010],"is_not":false,"summary":null,"term":"GO:0004081"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate.","definition_xrefs":["EC:3.6.1.17","PMID:4955726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:22484","MetaCyc:3.6.1.17-RXN","Reactome:R-HSA-5696197"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap(4)Aase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"Ap4Aase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"bis(5'-adenosyl)-tetraphosphatase activity","type":"narrow"},{"name":"bis(5'-guanosyl)-tetraphosphatase activity","type":"narrow"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase","type":"narrow"},{"name":"diadenosine P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"diguanosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"dinucleoside tetraphosphatase activity","type":"related"},{"name":"dinucleosidetetraphosphatase (asymmetrical) activity","type":"related"}],"termid":"GO:0004081","terms_by_termid":{"GO:0004081":null}}


id: MONDO:0008839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia-microcephaly-cataract syndrome","secondary_identifiers":["UMLS:C0796056","MEDGEN:167098","MESH:C563086","OMIM:208870"],"synonyms":[{"name":"AMC syndrome","type":"related"},{"name":"ataxia-microcephaly-cataract syndrome","type":"exact"}],"termid":"MONDO:0008839","xrefs":{"Monarch":{"xref_id":"0008839"}}}


id: MONDO:0100329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The initial viral infectious disase that causes illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary viral infectious disease","termid":"MONDO:0100329","xrefs":{"Monarch":{"xref_id":"0100329"}}}


id: PBO:0089392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synembryn family GEF, Ric8","termid":"PBO:0089392"}


id: GO:0018551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: [DsrC protein]-trisulfide + 3 H2O + NAD+ = [DsrC protein]-dithiol + 3 H+ + NADH + sulfite.","definition_xrefs":["RHEA:78943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dissimilatory sulfite reductase (NADH) activity","secondary_identifiers":["EC:1.8.1.22","MetaCyc:RXN-17803"],"synonyms":[{"name":"siroheme sulfite reductase activity","type":"related"}],"termid":"GO:0018551"}


id: GO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis","synonyms":[{"name":"activation of receptor mediated endocytosis","type":"narrow"},{"name":"positive regulation of receptor mediated endocytosis","type":"exact"},{"name":"stimulation of receptor mediated endocytosis","type":"narrow"},{"name":"up regulation of receptor mediated endocytosis","type":"exact"},{"name":"up-regulation of receptor mediated endocytosis","type":"exact"},{"name":"upregulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048260"}


id: PBO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cable_assembly","termid":"PBO:0035968"}


id: FYPO:0001568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutamate level","synonyms":[{"name":"increased cellular L-glutamate level","type":"exact"},{"name":"increased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamate level during vegetative growth","type":"exact"},{"name":"increased glutamate accumulation","type":"related"}],"termid":"FYPO:0001568"}


id: PBO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain protein, unknown biological role","termid":"PBO:0000822"}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: PBO:0059408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S34","termid":"PBO:0059408"}


id: GO:0044839
data:
  {"annotated_genes":["SJAG_03602","SJAG_03160","SJAG_03695","SJAG_04394","SJAG_02771","SJAG_02392","SJAG_00214","SJAG_02592","SJAG_01205","SJAG_02098","SJAG_01901","SJAG_01118","SJAG_00318","SJAG_01605","SJAG_01044","SJAG_04140","SJAG_00883","SJAG_01837","SJAG_01805","SJAG_03067","SJAG_03073","SJAG_00364","SJAG_02563","SJAG_02074","SJAG_02723","SJAG_00117","SJAG_03026","SJAG_01084","SJAG_03592","SJAG_03486","SJAG_01000","SJAG_03854","SJAG_00526","SJAG_01680","SJAG_06592","SJAG_04287","SJAG_00640","SJAG_03942","SJAG_00216","SJAG_00256","SJAG_04280","SJAG_01146","SJAG_01456","SJAG_02266","SJAG_03048","SJAG_03126","SJAG_02576","SJAG_03309","SJAG_04655","SJAG_01311","SJAG_01010","SJAG_04597","SJAG_02342","SJAG_02858","SJAG_04469","SJAG_01429","SJAG_04332","SJAG_00600","SJAG_02332","SJAG_04671","SJAG_01873","SJAG_03529","SJAG_01855","SJAG_01076","SJAG_00082","SJAG_04486","SJAG_03927","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77161,118041,106403,104309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[91396,116085,106628],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[116030,94378,100537,89952,101440],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[109331,117302,106631,78803,72122,70971,74703,79383,99191,93931,100538,91397,99358,116828,117129,112050,116087],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[94510,95824,116032,98425],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[89075,109332,117741,100539,117043,99360,106632,90171,101053,72120,111745,79246,91761,91398,75153],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[108589,93185,104502,106663,93535,107027,78435,111451,94338,100998,92893,111836,112494,114490],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[70452,78439],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[93771,92105,88011,110359,101762,98998,103494,98426,70772,108591,111216,88002,73450,94341,116511,91701,116699,107249,94380],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[101390,87803],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[73455],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[71350,111981],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G2 phase commits to M phase.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase 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cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044839","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: MONDO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radio-renal syndrome is a rare developmental defect during embryogenesis characterized by variable upper limb reduction defects and renal anomalies. Patients typically present absence/hypoplasia of digits, radii and/or ulnae, short stature and mild external ear malformation, as well as kidney agenesis or ectopia. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:3015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radio-renal syndrome","secondary_identifiers":["GARD:224","MEDGEN:419723","MESH:C536267","SCTID:766765009","UMLS:C2931146","OMIM:179280"],"synonyms":[{"name":"radial-renal syndrome","type":"related"},{"name":"radio renal syndrome","type":"related"}],"termid":"MONDO:0008359","xrefs":{"Monarch":{"xref_id":"0008359"}}}


id: GO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-CoA hydrolase activity (obsolete GO:0016290)","synonyms":[{"name":"fatty acyl thioesterase I","type":"related"},{"name":"long-chain fatty-acyl-CoA hydrolase activity","type":"broad"},{"name":"palmitoyl coenzyme A hydrolase activity","type":"related"},{"name":"palmitoyl thioesterase activity","type":"related"},{"name":"palmitoyl-CoA deacylase activity","type":"related"},{"name":"palmityl thioesterase I","type":"related"},{"name":"palmityl thioesterase activity","type":"related"},{"name":"palmityl-CoA deacylase activity","type":"related"}],"termid":"GO:0016290"}


id: GO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"positively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4 production","secondary_identifiers":["GO:0045404","GO:0150135"],"synonyms":[{"name":"activation of interleukin-4 production","type":"narrow"},{"name":"positive regulation of IL-4 production","type":"exact"},{"name":"positive regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-4 secretion","type":"narrow"},{"name":"stimulation of interleukin-4 production","type":"narrow"},{"name":"up regulation of interleukin-4 production","type":"exact"},{"name":"up-regulation of interleukin-4 production","type":"exact"},{"name":"upregulation of interleukin-4 production","type":"exact"}],"termid":"GO:0032753"}


id: FYPO:0004958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered RNA level in mitochondrion","synonyms":[{"name":"abnormal RNA level in mitochondrion","type":"exact"},{"name":"abnormal RNA level in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial RNA level","type":"exact"},{"name":"abnormal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"altered RNA level in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial RNA level","type":"exact"},{"name":"altered transcript level in mitochondrion","type":"exact"}],"termid":"FYPO:0004958"}


id: MONDO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by the presence of physical symptoms that suggest a medical condition but are not fully explained by any known medical reasons.","definition_xrefs":["NCIT:C34956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatoform disorder","secondary_identifiers":["EFO:0009687","ICD9:300.81","UMLS:C0037650","ICD9:300.8","ICD9:306.8","SCTID:31297008","DOID:4737","MESH:D013001","MEDGEN:20835"],"synonyms":[{"name":"physiological malfunction arising from mental factor","type":"related"},{"name":"psychophysiologic disorder","type":"related"},{"name":"psychosomatic disorder","type":"related"},{"name":"somatoform disorder","type":"exact"}],"termid":"MONDO:0003117","xrefs":{"Monarch":{"xref_id":"0003117"}}}


id: GO:0006383
data:
  {"annotated_genes":["SJAG_00637","SJAG_04161","SJAG_03921","SJAG_02815","SJAG_02898","SJAG_03689","SJAG_02600","SJAG_02070","SJAG_04408","SJAG_04030","SJAG_03546","SJAG_03035","SJAG_00067","SJAG_02101","SJAG_01713","SJAG_00731","SJAG_04934","SJAG_00585","SJAG_01313","SJAG_03931","SJAG_02242","SJAG_03014","SJAG_00142","SJAG_03144","SJAG_03578","SJAG_00619","SJAG_01765","SJAG_01827","SJAG_03354","SJAG_03181","SJAG_03120","SJAG_01444","SJAG_03761","SJAG_00421","SJAG_05339","SJAG_04261","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62323,62925,63040,64006,64059,66023,66693,69965,101511,102688,103344,105810,111491,112665,116790],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[73694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[73673],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016480"},{"annotations":[78077,75875],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006359"},{"annotations":[71667,103072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[116016,99885,92993,98144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006386"},{"annotations":[95552,56995,79771,73696,106940,115390,70979,88874,88141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006384"},{"annotations":[76940,76434,79562,75033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.","definition_xrefs":["PMID:12381659","GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00142":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01827":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02242":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_02898":null,"SJAG_03007":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03578":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_04030":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001009","GO:0001035","GO:0001041","Reactome:R-HSA-74158"],"synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"related"},{"name":"U2 snRNA transcription (S. cerevisiae)","type":"narrow"},{"name":"U6 snRNA transcription (mammalian)","type":"narrow"},{"name":"transcription from Pol III promoter","type":"exact"},{"name":"transcription from RNA polymerase III promoter","type":"exact"},{"name":"transcription from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription from RNA polymerase III type 3 promoter","type":"narrow"},{"name":"transcription from a RNA polymerase III hybrid type promoter","type":"narrow"}],"termid":"GO:0006383","terms_by_termid":{"GO:0006359":null,"GO:0006383":null,"GO:0006384":null,"GO:0006386":null,"GO:0016480":null,"GO:0042791":null,"GO:0042797":null,"GO:0070898":null}}


id: MONDO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3delta deficiency (obsolete MONDO:0000576)","termid":"MONDO:0000576","xrefs":{"Monarch":{"xref_id":"0000576"}}}


id: PBO:0068626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 6, pseudogene","termid":"PBO:0068626"}


id: PBO:0083255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps ORF YPL113C; diploid deletion in BY4743 strain background exhibits high budding index","termid":"PBO:0083255"}


id: PBO:0091361
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human NRAS","termid":"PBO:0091361"}


id: PBO:0065897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB40C, member RAS oncogene family","termid":"PBO:0065897"}


id: GO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a membrane, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in membrane","termid":"GO:0072658"}


id: GO:1904601
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108149,116207],"is_not":false,"summary":null,"term":"GO:1904601"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to a location within an actin fusion focus.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport to mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in actin fusion focus","type":"exact"},{"name":"protein localisation to actin fusion focus","type":"exact"},{"name":"protein localization in actin fusion focus","type":"exact"}],"termid":"GO:1904601","terms_by_termid":{"GO:1904601":null}}


id: PBO:0017092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, mitochondrial","termid":"PBO:0017092"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: GO:0097522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed through interaction of the protein(s) with an interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:cjm","PMID:11747630","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-DNA ISRE complex","termid":"GO:0097522"}


id: GO:0046618
data:
  {"annotated_genes":["SJAG_01145","SJAG_03363","SJAG_03951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117982,58495,63585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic from a cell, into the extracellular region. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"xenobiotic export from cell","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"drug export","type":"related"},{"name":"xenobiotic export","type":"related"}],"termid":"GO:0046618","terms_by_termid":{"GO:1990961":null}}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: FYPO:0005117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription","termid":"FYPO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during nitrogen starvation","synonyms":[{"name":"normal transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"normal transcription during nitrogen depletion","type":"exact"},{"name":"normal transcription during nitrogen deprivation","type":"exact"},{"name":"normal transcription during nitrogen limitation","type":"exact"},{"name":"normal transcription in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005117"}


id: PBO:0077701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin N","termid":"PBO:0077701"}


id: PBO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 2 (pseudogene)","termid":"PBO:0050034"}


id: PBO:0083201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene RPC34/YNR003C","termid":"PBO:0083201"}


id: GO:1905210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"}


id: PR:Q09815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom2 gene.","definition_xrefs":["UniProtKB:Q09815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.07","synonyms":[{"name":"Spom972h-pom2","type":"exact"},{"name":"meiotically up-regulated gene 189 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09815"}


id: GO:0021620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the hypoglossal nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve formation","synonyms":[{"name":"CN XII biosynthesis","type":"related"},{"name":"CN XII formation","type":"related"}],"termid":"GO:0021620"}


id: PBO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,B","termid":"PBO:0005180"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: GO:0102372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-amyrin + NADPH(4-) + O2 + H+ = uvaol + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-amyrin 28-monooxygenase activity (obsolete GO:0102372)","termid":"GO:0102372"}


id: MONDO:1011159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in koala.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, koala","secondary_identifiers":["OMIA:000747-38626"],"termid":"MONDO:1011159","xrefs":{"Monarch":{"xref_id":"1011159"}}}


id: MONDO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spindle epithelial tumor with thymus-like differentiation tumor (obsolete MONDO:0000538)","termid":"MONDO:0000538","xrefs":{"Monarch":{"xref_id":"0000538"}}}


id: MONDO:8000015
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85786],"is_not":false,"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"Any 46,XY complete gonadal dysgenesis in which the cause of the disease is a mutation in the DHX37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","OMIM:273250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78602","ICD9:752.89","Orphanet:983","UMLS:C0266427","GARD:16552","MESH:C537770","SCTID:53599007","MedDRA:10002641"],"synonyms":[{"name":"46, XY sex reversal 11","type":"exact"},{"name":"ETRS","type":"exact"},{"name":"SRXY11","type":"exact"},{"name":"TRS","type":"exact"},{"name":"XY gonadal agenesis syndrome","type":"related"},{"name":"anorchia, familial","type":"related"},{"name":"embryonic testicular regression syndrome","type":"exact"},{"name":"testicular regression syndrome","type":"exact"},{"name":"testicular regression, embryonic","type":"related"},{"name":"vanishing testes syndrome","type":"exact"},{"name":"vanishing testis syndrome","type":"exact"}],"termid":"MONDO:8000015","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"8000015"}}}


id: GO:0032239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleobase-containing compound transport","synonyms":[{"name":"regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032239"}


id: PBO:0058584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6717","termid":"PBO:0058584"}


id: PBO:0061305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 2","termid":"PBO:0061305"}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: GO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal sensitivity/resistance (obsolete GO:0009634)","synonyms":[{"name":"heavy metal sensitivity/resistance","type":"exact"}],"termid":"GO:0009634"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: MONDO:0015911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hemolytic anemia, the cause of which is not present at birth.","definition_xrefs":["NCIT:C34377"],"gene_count":0,"genotype_count":0,"name":"obsolete rare acquired hemolytic anemia (obsolete MONDO:0015911)","secondary_identifiers":["Orphanet:182047","ICD10CM:D59.0","ICD10CM:D59.3","SCTID:4854004"],"synonyms":[{"name":"Acquired hemolytic Anemia","type":"exact"}],"termid":"MONDO:0015911","xrefs":{"Monarch":{"xref_id":"0015911"}}}


id: GO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetophenone + CO2 = H+ + benzoyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0033"],"gene_count":0,"genotype_count":0,"name":"obsolete acetophenone carboxylase activity (obsolete GO:0018524)","termid":"GO:0018524"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: GO:0033348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a tetrose, any monosaccharide with a chain of four carbon atoms in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"tetrose biosynthetic process","synonyms":[{"name":"tetrose anabolism","type":"exact"},{"name":"tetrose biosynthesis","type":"exact"},{"name":"tetrose formation","type":"exact"},{"name":"tetrose synthesis","type":"exact"}],"termid":"GO:0033348"}


id: PBO:0039197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B","termid":"PBO:0039197"}


id: PBO:0074260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 1","termid":"PBO:0074260"}


id: PBO:0055736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 2","termid":"PBO:0055736"}


id: PR:O74449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.04","synonyms":[{"name":"Spom972h-SPCC16C4.04","type":"exact"}],"termid":"PR:O74449"}


id: GO:1904165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rph","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of triglyceride homeostasis (obsolete GO:1904165)","synonyms":[{"name":"activation of triacylglycerol homeostasis","type":"narrow"},{"name":"activation of triglyceride homeostasis","type":"narrow"},{"name":"positive regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up regulation of triglyceride homeostasis","type":"exact"},{"name":"up-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"up-regulation of triglyceride homeostasis","type":"exact"},{"name":"upregulation of triacylglycerol homeostasis","type":"exact"},{"name":"upregulation of triglyceride homeostasis","type":"exact"}],"termid":"GO:1904165"}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: GO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular process involved in reproduction in multicellular organism","synonyms":[{"name":"reproductive cellular process in multicellular organism","type":"exact"}],"termid":"GO:0022412"}


id: GO:0035189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex containing a heterodimeric E2F transcription factor and a Retinoblastoma (Rb) family member. This complex is capable of repressing transcription of E2F-regulated genes in order to regulate cell cycle progression.","definition_xrefs":["PMID:14616073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rb-E2F complex","synonyms":[{"name":"retinoblastoma-E2F complex","type":"exact"}],"termid":"GO:0035189"}


id: PBO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 20","termid":"PBO:0044742"}


id: PBO:0091297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10","termid":"PBO:0091297"}


id: SO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_attribute","synonyms":[{"name":"transcript attribute","type":"exact"}],"termid":"SO:0000237"}


id: RO:HOM0000010
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected by similarity in content and organization between chromosomes.","definition_xrefs":["MeSH:Synteny"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_homology_relationship_with","synonyms":[{"name":"syntenic homologous to","type":"exact"},{"name":"synteny","type":"related"}],"termid":"RO:HOM0000010"}


id: PR:P11620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.10","secondary_identifiers":["UniProtKB:P11620"],"synonyms":[{"name":"Spom972h-RAB1B","type":"exact"}],"termid":"PR:P11620"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0117167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERS2 antisense RNA 1","termid":"PBO:0117167"}


id: PBO:0073198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 26S proteasome subunit","termid":"PBO:0073198"}


id: GO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic process involved in female pregnancy","termid":"GO:0060136"}


id: PBO:0091893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose/fructose:proton symporter Ght5","termid":"PBO:0091893"}


id: PBO:0116246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase, makorin family","termid":"PBO:0116246"}


id: PBO:0067268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 342, pseudogene","termid":"PBO:0067268"}


id: FYPO:0004314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the CENP-A containing chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to CENP-A containing chromatin","synonyms":[{"name":"normal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"normal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004314"}


id: FYPO:0005814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends of microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end","synonyms":[{"name":"abolished protein localisation to microtubule plus-end","type":"exact"},{"name":"abolished protein localization to microtubule plus end","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule plus-end during vegetative growth","type":"exact"},{"name":"protein localization to microtubule plus-end abolished","type":"exact"}],"termid":"FYPO:0005814"}


id: MONDO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteoblastoma (obsolete MONDO:0000635)","termid":"MONDO:0000635","xrefs":{"Monarch":{"xref_id":"0000635"}}}


id: PBO:0068700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 81, pseudogene","termid":"PBO:0068700"}


id: MONDO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sucrose intolerance disease (obsolete MONDO:0045021)","secondary_identifiers":["ICD9:271.3","SCTID:190753003"],"synonyms":[{"name":"sucrose intolerance","type":"exact"}],"termid":"MONDO:0045021","xrefs":{"Monarch":{"xref_id":"0045021"}}}


id: MONDO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal growth of the cells that comprise the tissues of the brainstem. While the tumor may be histologically benign, it can produce great morbidity due to its location. It presents most commonly in the first two decades of life.","definition_xrefs":["NCIT:C9042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"childhood brain stem neoplasm","termid":"MONDO:0002914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood brain stem glioma","secondary_identifiers":["UMLS:C0278600","DOID:6383","GARD:9306","MEDGEN:124481"],"synonyms":[{"name":"brain stem glioma","type":"broad"},{"name":"brain stem glioma of childhood","type":"exact"},{"name":"childhood brain stem glioma","type":"exact"},{"name":"childhood brainstem glioma","type":"exact"},{"name":"childhood glioma of brain stem","type":"exact"},{"name":"childhood glioma of brainstem","type":"exact"},{"name":"childhood glioma of the brain stem","type":"exact"},{"name":"childhood glioma of the brainstem","type":"exact"},{"name":"paediatric brain stem glioma","type":"exact"},{"name":"paediatric brainstem glioma","type":"exact"},{"name":"paediatric glioma of brain stem","type":"exact"},{"name":"paediatric glioma of brainstem","type":"exact"},{"name":"paediatric glioma of the brain stem","type":"exact"},{"name":"paediatric glioma of the brainstem","type":"exact"},{"name":"pediatric brain stem glioma","type":"exact"},{"name":"pediatric brainstem glioma","type":"exact"},{"name":"pediatric glioma of brain stem","type":"exact"},{"name":"pediatric glioma of brainstem","type":"exact"},{"name":"pediatric glioma of the brain stem","type":"exact"},{"name":"pediatric glioma of the brainstem","type":"exact"}],"termid":"MONDO:0003869","xrefs":{"Monarch":{"xref_id":"0003869"}}}


id: PBO:0069690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 969, pseudogene","termid":"PBO:0069690"}


id: GO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bradykinin receptor binding","synonyms":[{"name":"bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031711"}


