# terms

id: PBO:0027970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_reactive_oxygen_species_level_during_nitrogen_starvation","termid":"PBO:0027970"}


id: PBO:0029589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_binding","termid":"PBO:0029589"}


id: MONDO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 7 (obsolete MONDO:0008120)","secondary_identifiers":["NANDO:1200047"],"termid":"MONDO:0008120","xrefs":{"Monarch":{"xref_id":"0008120"}}}


id: GO:0001173
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["PMID:16826228","GOC:txnOH","PMID:18846104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"DNA-templated transcriptional start site selection","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001176"],"synonyms":[{"name":"DNA-dependent transcriptional start site selection","type":"exact"},{"name":"transcriptional start site selection at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001173","terms_by_termid":{"GO:0001174":null}}


id: GO:0030133
data:
  {"annotated_genes":["SJAG_03907","SJAG_01633","SJAG_00916","SJAG_02539","SJAG_00379","SJAG_04517","SJAG_04609","SJAG_05345","SJAG_04023","SJAG_02282","SJAG_01939","SJAG_04513","SJAG_01189","SJAG_01309","SJAG_00906","SJAG_00072","SJAG_03153","SJAG_03558","SJAG_00557","SJAG_04509","SJAG_05344","SJAG_00284","SJAG_02240","SJAG_00669","SJAG_02349","SJAG_04565","SJAG_03915","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74636,119544],"is_not":false,"summary":null,"term":"GO:0030133"},{"annotations":[113013,77734,62100,112798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[65377,58639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[95483,71300,76998,78345,76457,71241,75071,75486,74716,72958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[67152,70283,101078,73760,75932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"},{"annotations":[115489,87838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"},{"annotations":[77237,71833],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[100188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.","definition_xrefs":["PMID:22160157","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00669":null,"SJAG_00906":null,"SJAG_00916":null,"SJAG_01189":null,"SJAG_01309":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03915":null,"SJAG_04023":null,"SJAG_04509":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"transport vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:30726171":null},"secondary_identifiers":["NIF_Subcellular:sao885490876"],"synonyms":[{"name":"Golgi to vacuole transport vesicle","type":"narrow"},{"name":"Golgi-vacuole transport vesicle","type":"narrow"},{"name":"constitutive secretory pathway transport vesicle","type":"exact"},{"name":"secretory vesicle","type":"related"}],"termid":"GO:0030133","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030127":null,"GO:0030130":null,"GO:0030133":null,"GO:0030140":null,"GO:0034044":null,"GO:0070382":null}}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: PBO:0062783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 1","termid":"PBO:0062783"}


id: GO:2000032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary shoot formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary shoot formation","synonyms":[{"name":"regulation of auxiliary shoot formation","type":"related"},{"name":"regulation of axillary shoot formation","type":"related"},{"name":"regulation of axillary shoot system formation","type":"exact"},{"name":"regulation of shoot branching","type":"related"}],"termid":"GO:2000032"}


id: GO:1901326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetracycline stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetracycline","termid":"GO:1901326"}


id: GO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell differentiation","termid":"GO:0048392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate commitment","synonyms":[{"name":"intermediate mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0048393"}


id: PBO:0065415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 1","termid":"PBO:0065415"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["Unimod:47#K","PubMed:7939682","OMSSA:93","PubMed:2498336","PubMed:7801126","RESID:AA0077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: PBO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 20","termid":"PBO:0075164"}


id: PBO:0086628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; expressed during copper starvation; YOR296W is not an essential gene","termid":"PBO:0086628"}


id: GO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 fibroblast growth factor receptor (FGFR1).","definition_xrefs":["GOC:fb_curators","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR1 binding","type":"broad"},{"name":"FGFR1 ligand","type":"narrow"},{"name":"breathless binding","type":"narrow"},{"name":"breathless ligand","type":"narrow"},{"name":"type 1 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005105"}


id: MONDO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superior mesenteric artery syndrome (SMAS) is a digestive condition that occurs when the duodenum (the first part of the small intestine) is compressed between two arteries (the aorta and the superior mesenteric artery). This compression causes partial or complete blockage of the duodenum. Symptoms vary based on severity, but can be severely debilitating. Symptoms may include abdominal pain, fullness, nausea, vomiting, and/or weight loss. SMAS typically is due toloss of the mesenteric fat pad (fatty tissue that surrounds the superior mesenteric artery). The most common cause is significant weight loss caused by medical disorders, psychological disorders, or surgery. In younger patients, it most commonly occurs after corrective spinal surgery for scoliosis. Delays in diagnosis may result in significant complications. Depending on the cause and severity, treatment options may include addressing the underlying cause, dietary changes (small feedings or a liquid diet), and/or surgery. Symptoms may not resolve completely after treatment.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"superior mesenteric artery syndrome","secondary_identifiers":["MEDGEN:21404","GARD:7712","NORD:1955","NCIT:C85175","SCTID:197006009","UMLS:C0038828","Orphanet:622099","DOID:3557","MESH:D013478"],"synonyms":[{"name":"Arteriomesenteric duodenal compression syndrome","type":"related"},{"name":"Cast syndrome","type":"related"},{"name":"Wilkie syndrome","type":"related"},{"name":"superior mesenteric artery syndrome","type":"exact"},{"name":"superior mesenteric artery syndromic disease","type":"exact"},{"name":"syndromic disease of superior mesenteric artery","type":"exact"},{"name":"vascular compression of the duodenum","type":"related"}],"termid":"MONDO:0002687","xrefs":{"Monarch":{"xref_id":"0002687"}}}


id: FYPO:0007963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells) during nitrogen limitation or poor nitrogen source.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating efficiency","termid":"FYPO:0001147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency during nitrogen stress","termid":"FYPO:0007963"}


id: PBO:0081864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 800","termid":"PBO:0081864"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: PBO:0074338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","termid":"PBO:0074338"}


id: PBO:0062395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 16 pseudogene","termid":"PBO:0062395"}


id: SO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-acetylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_acetylcytidine","secondary_identifiers":["RNAMOD:024"],"synonyms":[{"name":"N4 acetylcytidine","type":"exact"},{"name":"N4-acetylcytidine","type":"exact"},{"name":"ac4C","type":"exact"}],"termid":"SO:0001285"}


id: GO:0071115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to endostatin, the NC1 domain of the alpha1 chain of type XVIII collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha5-beta1 integrin-endostatin complex","synonyms":[{"name":"ITGA5-ITGB1-CAL4A3 complex","type":"narrow"}],"termid":"GO:0071115"}


id: GO:0018920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyphosate, a broad-spectrum herbicide also known by the trade name Roundup. It is a member of a broad class of compounds known as phosphonic acids, which contain a direct carbon-to-phosphorus (C-P) bond.","definition_xrefs":["UM-BBD_pathwayID:gly"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyphosate metabolic process","synonyms":[{"name":"Roundup metabolic process","type":"exact"},{"name":"Roundup metabolism","type":"exact"},{"name":"glyphosate metabolism","type":"exact"}],"termid":"GO:0018920"}


id: MONDO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rectal adenocarcinoma (obsolete MONDO:0005540)","termid":"MONDO:0005540","xrefs":{"Monarch":{"xref_id":"0005540"}}}


id: PBO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1B","termid":"PBO:0039574"}


id: GO:0021773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph","ISBN:0878937420","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatal medium spiny neuron differentiation","synonyms":[{"name":"medium-sized spiny neuron differentiation","type":"exact"},{"name":"striatal MSN differentiation","type":"exact"}],"termid":"GO:0021773"}


id: GO:0005548
data:
  {"annotated_genes":["SJAG_16459","SJAG_06440","SJAG_03721","SJAG_04370","SJAG_05209","SJAG_00669","SJAG_03741","SJAG_01945","SJAG_01225","SJAG_03710","SJAG_03746","SJAG_03338","SJAG_01229","SJAG_03172","SJAG_04984","SJAG_03076","SJAG_01305","SJAG_03416","SJAG_01731","SJAG_01470","SJAG_00576","SJAG_00230","SJAG_02897","SJAG_03100"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[99478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[102221,101289,70069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[97923,94399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94400,97924,100195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[97543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[94401,100196,97925,99480,112514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[69918,73334,74418,76287,76513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[112516,99481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[112517,101420,94402,97926,99482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[73069,103595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[107540,107666,89186,104050,105867,106758,90871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00669":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_03076":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phospholipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-216757","Reactome:R-HSA-5678706","Reactome:R-HSA-8857662","Reactome:R-HSA-382553","Reactome:R-HSA-5678749","Reactome:R-HSA-8865637","Reactome:R-HSA-8867876","GO:0008497"],"termid":"GO:0005548","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120014":null,"GO:0120019":null,"GO:0140345":null,"GO:0140346":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: MONDO:0021181
data:
  {"annotated_genes":["SJAG_03115","SJAG_02093","SJAG_02839","SJAG_03712","SJAG_03204","SJAG_00108","SJAG_01466","SJAG_02091","SJAG_02453","SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86079,86081,86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"},{"annotations":[86084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[85944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[87239,87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008559"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"Hemorrhagic and thrombotic disorders that occur as a consequence of inherited abnormalities in blood coagulation.","definition_xrefs":["MESH:D025861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_01466":null,"SJAG_01732":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02453":null,"SJAG_02839":null,"SJAG_03115":null,"SJAG_03204":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited blood coagulation disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:183654","GARD:20319","MEDGEN:163105","DOID:2214","UMLS:C0852077"],"synonyms":[{"name":"coagulation disorder, hereditary","type":"exact"},{"name":"coagulation disorder, inherited","type":"exact"},{"name":"coagulation disorders, hereditary","type":"exact"},{"name":"coagulation disorders, inherited","type":"exact"},{"name":"hereditary blood coagulation disease","type":"exact"},{"name":"hereditary blood coagulation disorders","type":"exact"},{"name":"hereditary coagulation disorder","type":"exact"},{"name":"hereditary coagulation disorders","type":"exact"},{"name":"inherited blood coagulation disease","type":"related"},{"name":"inherited blood coagulation disorders","type":"exact"},{"name":"inherited coagulation disorder","type":"exact"},{"name":"inherited coagulation disorders","type":"exact"},{"name":"rare genetic coagulation disorder","type":"exact"}],"termid":"MONDO:0021181","terms_by_termid":{"MONDO:0008559":null,"MONDO:0009206":null,"MONDO:0010518":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0014885":null,"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0021181"}}}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: GO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964038"],"synonyms":[{"name":"LDL clearance","type":"exact"}],"termid":"GO:0034383"}


id: MONDO:0019488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare epilepsy syndrome characterized by recurrent, long-lasting myoclonic status in infants and young children with a non-progressive encephalopathy, associated with transient and recurring motor, cognitive and/or behavioral disturbances.","definition_xrefs":["Orphanet:86913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy in non-progressive encephalopathies","secondary_identifiers":["MEDGEN:1661865","UMLS:C4755298","GARD:19088"],"synonyms":[{"name":"myoclonic status in non-progressive encephalopathies","type":"exact"},{"name":"myoclonus epilepsy in non-progressive encephalopathies","type":"exact"}],"termid":"MONDO:0019488","xrefs":{"Monarch":{"xref_id":"0019488"}}}


id: PBO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caspofungin","termid":"PBO:0030014"}


id: MONDO:0019789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cytophagic histiocytic panniculitis (CHP) is a very rare form of panniculitis manifesting as recurrent multiple subcutaneous nodules (which may progressively become ecchymotic and ulcerated), and histologically characterized by lobular panniculitis with lymphocytic and histiocytic infiltration in the subcutaneous adipose tissue.","definition_xrefs":["Orphanet:94087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytophagic histiocytic panniculitis","secondary_identifiers":["icd11.foundation:1978274002","MEDGEN:590528","SCTID:238883003","UMLS:C0406594","GARD:19249"],"synonyms":[{"name":"CHP","type":"exact"},{"name":"Winkelmann cytophagic panniculitis","type":"exact"}],"termid":"MONDO:0019789","xrefs":{"Monarch":{"xref_id":"0019789"}}}


id: PR:O14350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi3 gene.","definition_xrefs":["UniProtKB:O14350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi1-interacting protein swi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.04","synonyms":[{"name":"Spom972h-swi3","type":"exact"},{"name":"replication fork protection complex subunit swi3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14350"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: PBO:0113046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin segregase involved in DNA replication; ATPase activity, stimulated by S phase CDK-dependent phosphorylation, is coupled to nucleosome disassembly, promoting DNA replication; regulates cell-cycle-dependent histone gene expression; contains AAA+-ATPase domains and a non-canonical bromodomain; hexameric; relocalizes to the cytosol in response to hypoxia; human ortholog ATAD2 is a coregulator of oncogenic transcription factors and an oncogene overexpressed in cancers with poor prognosis","termid":"PBO:0113046"}


id: PBO:0040994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3","termid":"PBO:0040994"}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: PATO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000995 viscosity value (obsolete PATO:0000995)","termid":"PATO:0000995"}


id: MONDO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,xx sex reversal 5","secondary_identifiers":["UMLS:C5394441","OMIM:618901","DOID:0080943","MEDGEN:1713956"],"synonyms":[{"name":"46,XX SEX REVERSAL 5","type":"exact"},{"name":"46,xx sex reversal 5","type":"exact"},{"name":"SRXX5","type":"exact"}],"termid":"MONDO:0030049","xrefs":{"Monarch":{"xref_id":"0030049"}}}


id: FYPO:0004870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of mitotic G2 DNA damage checkpoint","synonyms":[{"name":"decreased duration of G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"decreased duration of mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"reduced duration of mitotic G2 DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004870"}


id: PBO:0065655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type F","termid":"PBO:0065655"}


id: PBO:0005644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp6 (predicted)","termid":"PBO:0005644"}


id: MONDO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 31","secondary_identifiers":["DOID:0112071","UMLS:C4748838","MEDGEN:1648395","GARD:16331","OMIM:618251"],"synonyms":[{"name":"MC1DN31","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 31","type":"related"}],"termid":"MONDO:0032634","xrefs":{"Monarch":{"xref_id":"0032634"}}}


id: MONDO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystadenocarcinoma that involves the biliary tree.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract cancer","termid":"MONDO:0003060"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"biliary cystadenocarcinoma","secondary_identifiers":["MEDGEN:473526","Orphanet:424982","GARD:21790","UMLS:C2064409"],"synonyms":[{"name":"intrahepatic bile duct cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0018535","xrefs":{"Monarch":{"xref_id":"0018535"}}}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: PR:P78811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UTP--glucose-1-phosphate uridylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase fyu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.04","secondary_identifiers":["UniProtKB:P78811"],"synonyms":[{"name":"SPCC1322.04","type":"related"},{"name":"Spom972h-UGP2","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P78811"}


id: PBO:0057775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2278","termid":"PBO:0057775"}


id: GO:1900786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphtho-gamma-pyrone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"naphtho-gamma-pyrone catabolic process","synonyms":[{"name":"naphtho-gamma-pyrone breakdown","type":"exact"},{"name":"naphtho-gamma-pyrone catabolism","type":"exact"},{"name":"naphtho-gamma-pyrone degradation","type":"exact"},{"name":"naphtho-gamma-pyrones breakdown","type":"related"},{"name":"naphtho-gamma-pyrones catabolic process","type":"related"},{"name":"naphtho-gamma-pyrones catabolism","type":"related"},{"name":"naphtho-gamma-pyrones degradation","type":"related"}],"termid":"GO:1900786"}


id: GO:0021647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the vestibulocochlear nerve to attain its fully functional state. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve maturation","synonyms":[{"name":"CN VIII maturation","type":"related"},{"name":"auditory nerve maturation","type":"related"}],"termid":"GO:0021647"}


id: PBO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 2","termid":"PBO:0062021"}


id: PBO:0076076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid perinuclear RNA binding protein","termid":"PBO:0076076"}


id: GO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.","definition_xrefs":["NIF_Subcellular:sao1596975044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"main axon","synonyms":[{"name":"axon shaft","type":"related"},{"name":"axon trunk","type":"exact"},{"name":"axonal shaft","type":"related"}],"termid":"GO:0044304"}


id: GO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular compartment in a host cell which increases the efficiency of viral replication, and shields the virus from host defenses. Viral factories can be either cytoplasmic or nuclear and often arise from extensive rearrangement of host cell cytoskeletal and/or cell membrane compartments.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral factory","synonyms":[{"name":"virus factory","type":"exact"}],"termid":"GO:0039713"}


id: PATO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consistency of mucus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucoid","synonyms":[{"name":"mucinous","type":"related"},{"name":"mucous","type":"related"}],"termid":"PATO:0001371"}


id: GO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane catabolic process","synonyms":[{"name":"alkane breakdown","type":"exact"},{"name":"alkane catabolism","type":"exact"},{"name":"alkane degradation","type":"exact"}],"termid":"GO:0043448"}


id: GO:1905638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["PMID:27122350","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"negatively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"down regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"down-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"downregulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"inhibition of mitochondrial mRNA catabolic process","type":"narrow"}],"termid":"GO:1905638"}


id: PATO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elliptic","termid":"PATO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"round","type":"related"},{"name":"rounded","type":"related"}],"termid":"PATO:0000411"}


id: PBO:0076113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 antisense RNA 1 (head to head)","termid":"PBO:0076113"}


id: MONDO:0004665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of classical Hodgkin lymphoma characterized by collagen bands that surround at least one nodule, and Hodgkin and Reed-Sternberg cells with lacunar type morphology. (WHO, 2008)","definition_xrefs":["NCIT:C3518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"nodular sclerosis classical Hodgkin lymphoma","secondary_identifiers":["SCTID:118608000","UMLS:C0152268","EFO:0004708","MEDGEN:101830","GARD:19591","ICDO:9663/3","icd11.foundation:1995941600","DOID:8838","ICD9:201.5","ONCOTREE:NSCHL","Orphanet:98843"],"synonyms":[{"name":"Hodgkin lymphoma, nodular sclerosis","type":"exact"},{"name":"Hodgkin's disease nodular sclerosis","type":"exact"},{"name":"Hodgkin's disease, nodular sclerosis","type":"related"},{"name":"Hodgkin's disease, nodular sclerosis NOS (morphologic abnormality)","type":"exact"},{"name":"Hodgkin's disease, nodular sclerosis of unspecified site","type":"exact"},{"name":"Hodgkin's lymphoma, nodular sclerosis","type":"related"},{"name":"Hodgkin's nodular sclerosis","type":"exact"},{"name":"NSCHL","type":"exact"},{"name":"NSHD","type":"exact"},{"name":"NSHL","type":"exact"},{"name":"classical Hodgkin lymphoma, nodular sclerosis","type":"exact"},{"name":"nodular sclerosis Classic Hodgkin lymphoma","type":"exact"},{"name":"nodular sclerosis Hodgkin lymphoma","type":"exact"},{"name":"nodular sclerosis Hodgkin's disease","type":"exact"},{"name":"nodular sclerosis Hodgkin's lymphoma","type":"exact"},{"name":"nodular sclerosis classical Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0004665","xrefs":{"Monarch":{"xref_id":"0004665"}}}


id: PBO:0113457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; increases the activity and thermal stability of the complex, along with Pop2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0113457"}


id: GO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of cells in the trophectoderm.","definition_xrefs":["GOC:dph","ISBN:0198542771","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"blastocyst growth","termid":"GO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell proliferation","synonyms":[{"name":"trophectoderm cell proliferation","type":"exact"}],"termid":"GO:0001834"}


id: GO:0019802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of glutamine to yield an L-glutamimide residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["GOC:tb","RESID:AA0303","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0006520","GO:0044281","GO:0010467"],"is_obsolete":false,"name":"cyclization of glutamine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of glutamine, during protein splicing","type":"related"}],"termid":"GO:0019802"}


id: MONDO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare diffuse large B-cell lymphoma that arises from the liver and the bulk of the tumor is located in the liver.","definition_xrefs":["NCIT:C96843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"liver lymphoma","termid":"MONDO:0004695"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver diffuse large B-cell lymphoma","secondary_identifiers":["MEDGEN:473542","UMLS:C2184126","EFO:1000323"],"synonyms":[{"name":"diffuse large B-cell lymphoma of liver","type":"exact"},{"name":"hepatic diffuse large B-cell lymphoma","type":"exact"},{"name":"liver diffuse large B-cell lymphoma","type":"exact"},{"name":"primary hepatic diffuse large B-cell lymphoma","type":"exact"},{"name":"primary liver diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006268","xrefs":{"Monarch":{"xref_id":"0006268"}}}


id: GO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["PMID:22750871","GOC:crds","PMID:11222605","PMID:8682792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: PBO:0062385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 4 pseudogene","termid":"PBO:0062385"}


id: PBO:0036261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase subunit Mtr4","termid":"PBO:0036261"}


id: GO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of biting and mashing food with the teeth prior to swallowing.","definition_xrefs":["GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mastication","synonyms":[{"name":"chewing","type":"exact"}],"termid":"GO:0071626"}


id: PBO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2449","termid":"PBO:0055034"}


id: PATO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000979 porosity value (obsolete PATO:0000979)","termid":"PATO:0000979"}


id: PBO:0004347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase (predicted)","termid":"PBO:0004347"}


id: PBO:0075681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1","termid":"PBO:0075681"}


id: PBO:0075154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 10","termid":"PBO:0075154"}


id: GO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal protein stabilization (obsolete GO:0017029)","synonyms":[{"name":"lysosomal protein stabilization","type":"exact"}],"termid":"GO:0017029"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["GOC:krc","PMID:29991750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0044085","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: FYPO:0005792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G2. Cell length is normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005568","FYPO:0000005","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during G0 to G2 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G2","type":"exact"},{"name":"T-shaped cell during cell quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G2","type":"exact"},{"name":"T-shaped cell during quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G2 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G2","type":"exact"},{"name":"cell morphology, T shaped during G0 to G2 transition","type":"exact"}],"termid":"FYPO:0005792"}


id: GO:0017101
data:
  {"annotated_genes":["SJAG_01259","SJAG_01159","SJAG_01197"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70360,76687,78115],"is_not":false,"summary":null,"term":"GO:0017101"}]},"cv_name":"cellular_component","definition":"A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates.","definition_xrefs":["GOC:jl","PMID:16169847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_01197":null,"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"aminoacyl-tRNA synthetase multienzyme complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aminoacyl-tRNA synthetase complex","type":"exact"},{"name":"multisynthetase complex","type":"exact"}],"termid":"GO:0017101","terms_by_termid":{"GO:0017101":null}}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","secondary_identifiers":["Reactome:R-HSA-8939236"],"synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: GO:0044845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Extension of the O-linked mannose residue of a mannoprotein by the stepwise addition of further mannose molecules.","definition_xrefs":["GOC:jl","PMID:19429925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"chain elongation of O-linked mannose residue","termid":"GO:0044845"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: GO:0015078
data:
  {"annotated_genes":["SJAG_04015","SJAG_MIT37","SJAG_00136","SJAG_00985","SJAG_07003","SJAG_MIT09","SJAG_00057","SJAG_03337","SJAG_04152","SJAG_01406","SJAG_04068","SJAG_01541","SJAG_03406","SJAG_03608","SJAG_04905","SJAG_04616","SJAG_04673","SJAG_03114","SJAG_02780","SJAG_03960","SJAG_04258","SJAG_01471","SJAG_03925","SJAG_04122","SJAG_02598","SJAG_MIT15","SJAG_00976","SJAG_00915","SJAG_03820","SJAG_00133","SJAG_MIT13","SJAG_05294","SJAG_02782","SJAG_MIT20","SJAG_02646","SJAG_07007","SJAG_04698","SJAG_02023","SJAG_00212","SJAG_00836","SJAG_00755","SJAG_04167","SJAG_05629","SJAG_03595","SJAG_04955","SJAG_MIT03","SJAG_02504","SJAG_03490","SJAG_01397","SJAG_01817","SJAG_01447","SJAG_MIT04","SJAG_01077","SJAG_01129","SJAG_00516","SJAG_00601","SJAG_02779","SJAG_04506","SJAG_00438","SJAG_04096","SJAG_04028","SJAG_02564","SJAG_01490","SJAG_07006","SJAG_03606","SJAG_01913","SJAG_05204","SJAG_01669","SJAG_02105","SJAG_02958","SJAG_01190","SJAG_00542","SJAG_01355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91168,70092,78387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[70944,73071,74599,76228,73046,72848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[91920,119081,119059,108300,88153,115483,114247,116845,89179,119109,73799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[117238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[100680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[101663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[95744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[91169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[71998,72825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[112875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[112366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[70464,73093,77812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[80059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[93254,93840,119096,72529,69922,75515,77981,79185,107918,57824,77696,101824,107826,69750,94816,119090,119102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[78458,60636,60537,64542,58207,61144,61827,67673,70999,62569,65333,78351,79673,61271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[78064,80058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[71695,79238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[101666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[75520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[117717,107977,104080,113422,63921,119085,118195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a proton from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter 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transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164834","Reactome:R-HSA-917841","Reactome:R-HSA-170026","Reactome:R-HSA-168313","Reactome:R-HSA-74723","Reactome:R-HSA-9864415","Reactome:R-HSA-1222516"],"synonyms":[{"name":"hydrogen ion transmembrane transporter activity","type":"exact"},{"name":"proton transporter activity","type":"exact"}],"termid":"GO:0015078","terms_by_termid":{"GO:0004129":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008121":null,"GO:0008137":null,"GO:0008506":null,"GO:0008553":null,"GO:0008900":null,"GO:0010486":null,"GO:0015295":null,"GO:0015366":null,"GO:0015369":null,"GO:0015385":null,"GO:0015386":null,"GO:0034216":null,"GO:0046933":null,"GO:0046961":null,"GO:0097434":null}}


id: GO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the dorsal motor nucleus of the vagus nerve is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: GO:0035364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GO:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"thymine transport","synonyms":[{"name":"5-methyluracil transport","type":"exact"},{"name":"thymine transmembrane transport","type":"exact"}],"termid":"GO:0035364"}


id: PBO:0012600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012600"}


id: PBO:0059117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase DBH like 1","termid":"PBO:0059117"}


id: MONDO:1012636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in pigs and is characterized by male sex reversal with female karyotype (XX) and absence of the SRY gene.","definition_xrefs":["OMIA:000901-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, pig","termid":"MONDO:1012636","xrefs":{"Monarch":{"xref_id":"1012636"}}}


id: PBO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug165","termid":"PBO:0016922"}


id: FYPO:0003263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more than four, and up to eight, spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:vw","PMID:24196444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more than four spores","synonyms":[{"name":"8-spored asci","type":"related"},{"name":"abnormal ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more than four spores","type":"exact"},{"name":"asci with increased number of spores","type":"exact"},{"name":"eight-spored asci","type":"related"}],"termid":"FYPO:0003263"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: GO:0010589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process within a leaf by which specific areas of cell differentiation are determined along a proximal/distal axis.","definition_xrefs":["PMID:18398054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf proximal/distal pattern formation","termid":"GO:0010589"}


id: PBO:0078546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 37","termid":"PBO:0078546"}


id: GO:0097315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["GOC:di","PMID:21700702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"}


id: GO:0016769
data:
  {"annotated_genes":["SJAG_03434","SJAG_04728","SJAG_03672","SJAG_03055","SJAG_01019","SJAG_02791","SJAG_03312","SJAG_03856","SJAG_00673","SJAG_04149","SJAG_02901","SJAG_04678","SJAG_02408","SJAG_03292","SJAG_04988","SJAG_00495","SJAG_00691","SJAG_03641","SJAG_00714","SJAG_04145","SJAG_03306","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72404,76524,99385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047536"},{"annotations":[72890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046820"},{"annotations":[56991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034386"},{"annotations":[76157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004015"},{"annotations":[78282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"},{"annotations":[87391,75185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[57844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004400"},{"annotations":[73700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016212"},{"annotations":[111250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004021"},{"annotations":[77560,70764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004069"},{"annotations":[110452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[110453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[98345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"},{"annotations":[98346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004838"},{"annotations":[110454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"},{"annotations":[62379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003992"},{"annotations":[79544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004648"},{"annotations":[78256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004587"},{"annotations":[95752,58320,57694,67160,113049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008483"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00714":null,"SJAG_01019":null,"SJAG_02408":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_03055":null,"SJAG_03292":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03672":null,"SJAG_03856":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04678":null,"SJAG_04728":null,"SJAG_04988":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"transferase activity, transferring nitrogenous groups","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.6.-.-"],"synonyms":[{"name":"transferase activity, transferring other nitrogenous groups","type":"narrow"}],"termid":"GO:0016769","terms_by_termid":{"GO:0003923":null,"GO:0003992":null,"GO:0004015":null,"GO:0004021":null,"GO:0004069":null,"GO:0004360":null,"GO:0004400":null,"GO:0004587":null,"GO:0004648":null,"GO:0004838":null,"GO:0008483":null,"GO:0016212":null,"GO:0034386":null,"GO:0046820":null,"GO:0047536":null,"GO:0052654":null,"GO:0052655":null,"GO:0052656":null,"GO:0080130":null}}


id: GO:0044016
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98965],"is_not":false,"summary":null,"term":"GO:0044016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 4) = CoA + histone H3 N6-acetyl-L-lysine (position 4).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0034212","GO:0003674","GO:0016746","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K4 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K4 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K4 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K4 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0044016","terms_by_termid":{"GO:0044016":null}}


id: MONDO:0022798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cohen Lockood Wyborney syndrome","termid":"MONDO:0022798","xrefs":{"Monarch":{"xref_id":"0022798"}}}


id: PBO:0090485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1","termid":"PBO:0090485"}


id: MONDO:1011613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, domestic cat","secondary_identifiers":["OMIA:001056-9685"],"termid":"MONDO:1011613","xrefs":{"Monarch":{"xref_id":"1011613"}}}


id: PBO:0108836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Iml1","termid":"PBO:0108836"}


id: MONDO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy due to drug","secondary_identifiers":["SCTID:7339009","MEDGEN:509649","UMLS:C0154762","DOID:14184","ICD9:357.6"],"termid":"MONDO:0001904","xrefs":{"Monarch":{"xref_id":"0001904"}}}


id: MONDO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrin-producing neuroendocrine tumor that arises from the duodenum. It is characterized by the presence of uniform cells that form pseudorosettes. The neoplastic cells have uniform nuclei and small amount of eosinophilic cytoplasm.","definition_xrefs":["NCIT:C5731"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"duodenal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal gastrin-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C1333321","DOID:7959","MEDGEN:272550"],"synonyms":[{"name":"duodenal G-cell gastrin producing tumor","type":"exact"},{"name":"duodenal G-cell gastrin producing tumour","type":"exact"},{"name":"duodenal gastrin-producing NET","type":"exact"},{"name":"duodenal gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenal gastrinoma","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"duodenum gastrin-producing neuroendocrine tumour","type":"exact"},{"name":"gastrin producing tumor of duodenum","type":"exact"},{"name":"gastrin producing tumor of the duodenum","type":"exact"},{"name":"gastrin producing tumour of duodenum","type":"exact"},{"name":"gastrin producing tumour of the duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of duodenum","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of duodenum","type":"exact"},{"name":"gastrinoma of duodenum","type":"exact"},{"name":"gastrinoma of the duodenum","type":"exact"},{"name":"malignant duodenal gastrinoma","type":"exact"}],"termid":"MONDO:0004411","xrefs":{"Monarch":{"xref_id":"0004411"}}}


id: PBO:0068651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 32, pseudogene","termid":"PBO:0068651"}


id: PBO:0057056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 141","termid":"PBO:0057056"}


id: MONDO:0012899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, androgenetic, 3","secondary_identifiers":["UMLS:C2676272","MESH:C567317","MEDGEN:382808","OMIM:612421"],"synonyms":[{"name":"AGA3","type":"exact"},{"name":"alopecia, androgenetic, 3","type":"exact"}],"termid":"MONDO:0012899","xrefs":{"Monarch":{"xref_id":"0012899"}}}


id: MONDO:0005201
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[85193,85192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","definition":"A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.","definition_xrefs":["NCIT:C62798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"restrictive cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:316495940","Orphanet:217632","UMLS:C0007196","NANDO:1200293","MEDGEN:40111","SCTID:415295002","DOID:397","MESH:D002313","GARD:20531","NANDO:2200233","EFO:0002630","ICD9:425.4","MedDRA:10038748","NANDO:1200292","NANDO:2100058"],"synonyms":[{"name":"cardiomyopathy, constrictive","type":"exact"},{"name":"familial restrictive cardiomyopathy","type":"narrow"},{"name":"primary restrictive cardiomyopathy","type":"exact"},{"name":"restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0005201","terms_by_termid":{"MONDO:0009290":null,"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0005201"}}}


id: GO:1905913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:22362515","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"negatively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion export across plasma membrane","synonyms":[{"name":"down regulation of calcium ion efflux from cell","type":"exact"},{"name":"down regulation of calcium ion export from cell","type":"exact"},{"name":"down-regulation of calcium ion efflux from cell","type":"exact"},{"name":"down-regulation of calcium ion export from cell","type":"exact"},{"name":"downregulation of calcium ion efflux from cell","type":"exact"},{"name":"downregulation of calcium ion export from cell","type":"exact"},{"name":"inhibition of calcium ion efflux from cell","type":"narrow"},{"name":"inhibition of calcium ion export from cell","type":"narrow"},{"name":"negative regulation of calcium ion efflux from cell","type":"exact"},{"name":"negative regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905913"}


id: PBO:0017564
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUclear Pore factor","termid":"PBO:0017564"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: PBO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex mu subunit Apm1","termid":"PBO:0003814"}


id: GO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic development","synonyms":[{"name":"down regulation of embryonic development","type":"exact"},{"name":"down-regulation of embryonic development","type":"exact"},{"name":"downregulation of embryonic development","type":"exact"},{"name":"inhibition of embryonic development","type":"narrow"}],"termid":"GO:0045992"}


id: PBO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase (predicted)","termid":"PBO:0001084"}


id: GO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An envelope that surrounds a bacterial cell and includes the cytoplasmic membrane and everything external, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:mlg","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell envelope","secondary_identifiers":["Wikipedia:Cell_envelope"],"termid":"GO:0030313"}


id: PBO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa49","termid":"PBO:0090440"}


id: PBO:0057793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-2","termid":"PBO:0057793"}


id: PBO:0048208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma1","termid":"PBO:0048208"}


id: PBO:0052949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1","termid":"PBO:0052949"}


id: MONDO:0013201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Waardenburg syndrome type 4 (Waardenburg-Shah syndrome) caused by mutations in EDN3.","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg-Shah syndrome","termid":"MONDO:0019518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 4B","secondary_identifiers":["DOID:0110954","MESH:C567680","UMLS:C2750457","MEDGEN:412961","OMIM:613265","GARD:15641"],"synonyms":[{"name":"EDN3 Waardenburg syndrome","type":"exact"},{"name":"WS4B","type":"exact"},{"name":"Waardenburg syndrome caused by mutation in EDN3","type":"exact"},{"name":"Waardenburg syndrome type 4B","type":"exact"},{"name":"Waardenburg syndrome type IVB","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease type 4B","type":"exact"},{"name":"Waardenburg syndrome, type 4B","type":"related"},{"name":"Waardenburg syndrome, type 4B, with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013201","xrefs":{"Monarch":{"xref_id":"0013201"}}}


id: MOD:01579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01579"}


id: FYPO:0007402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex organization is abnormal.","definition_xrefs":["PomBase:mah","GO:0043933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein complex organization during vegetative growth","synonyms":[{"name":"abnormal protein complex organisation during vegetative growth","type":"exact"},{"name":"abnormal protein complex organization during mitotic cell cycle","type":"related"},{"name":"abnormal protein-containing complex subunit organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007402"}


id: PBO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECRG4 augurin precursor","termid":"PBO:0045775"}


id: MONDO:0004142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of large cell neuroendocrine lung carcinoma characterized by the presence of large neuroendocrine cells in combination with adenocarcinoma, squamous cell carcinoma, giant cell carcinoma and/ or spindle cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary large cell neuroendocrine carcinoma","termid":"MONDO:0003960"},{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung combined large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:232386","NCIT:C7267","UMLS:C1333122","DOID:7207"],"synonyms":[{"name":"combined large cell lung neuroendocrine carcinoma","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of lung","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of the lung","type":"exact"},{"name":"pulmonary combined large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0004142","xrefs":{"Monarch":{"xref_id":"0004142"}}}


id: GO:0032633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-4 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-4 production","secondary_identifiers":["GO:0042224","GO:0042097","GO:0072602"],"synonyms":[{"name":"IL-4 production","type":"exact"},{"name":"interleukin-4 biosynthetic process","type":"narrow"},{"name":"interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032633"}


id: MONDO:1012101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, non-human animal","termid":"MONDO:1011906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, cattle","secondary_identifiers":["OMIA:000435-9913"],"termid":"MONDO:1012101","xrefs":{"Monarch":{"xref_id":"1012101"}}}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: MONDO:0005638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by the lack of ability to recognize individuals, objects, shapes, sounds, or smells. There is no loss of memory. It is caused by neurological damage in the brain, specifically in the occipital or parietal lobes.","definition_xrefs":["NCIT:C84542"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"communication disorder","termid":"MONDO:0002182"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnosia","secondary_identifiers":["MESH:D000377","MESH:D001072","EFO:0007136","icd11.foundation:1315065296","MEDGEN:174","SCTID:68345001","UMLS:C0001816","ICD10CM:R48.1","ICD10CM:R48.2","DOID:4090"],"synonyms":[{"name":"Monomodal visual amnesia","type":"narrow"},{"name":"agnosia","type":"exact"},{"name":"dyspraxia (finding)","type":"related"},{"name":"dyspraxia syndrome","type":"related"},{"name":"primary visual agnosia","type":"narrow"},{"name":"visual amnesia","type":"narrow"}],"termid":"MONDO:0005638","xrefs":{"Monarch":{"xref_id":"0005638"}}}


id: MONDO:0006843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hole in the macula of the retina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular holes","secondary_identifiers":["MESH:D012167","EFO:1001028","DOID:7633","SCTID:232006002","NCIT:C34795","UMLS:C0024441","MEDGEN:6176"],"synonyms":[{"name":"macular hole","type":"exact"}],"termid":"MONDO:0006843","xrefs":{"Monarch":{"xref_id":"0006843"}}}


id: FYPO:0005102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a protein found associated with chromatin at the mating type region is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PMID:19117951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level at silent mating-type cassette","synonyms":[{"name":"decreased protein level at mating type region","type":"exact"},{"name":"decreased protein level at mating type region chromatin","type":"exact"},{"name":"decreased protein level at mating type region during mitotic cell cycle","type":"related"},{"name":"decreased protein level at mating type region during vegetative growth","type":"exact"},{"name":"decreased protein level at mating type region heterochromatin","type":"exact"},{"name":"reduced protein level at mating type region","type":"exact"}],"termid":"FYPO:0005102"}


id: PBO:0053205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3 binding protein","termid":"PBO:0053205"}


id: PBO:0041475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 58","termid":"PBO:0041475"}


id: PBO:0051423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-34 (pseudogene)","termid":"PBO:0051423"}


id: PBO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 3","termid":"PBO:0046281"}


id: MONDO:0007416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic tubulointerstitial nephropathy that affects people in certain rural areas along the Danube river in the Balkans. It leads to end-stage renal disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial nephritis","termid":"MONDO:0001085"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Balkan nephropathy","secondary_identifiers":["NCIT:C123025","OMIM:124100","UMLS:C0004698","ICD9:583.89","EFO:0007164","SCTID:26121002","ICD10CM:N15.0","MEDGEN:495","DOID:3052","icd11.foundation:18497836","MESH:D001449"],"synonyms":[{"name":"AAN","type":"related"},{"name":"BEN","type":"related"},{"name":"Balkan endemic nephropathy","type":"exact"},{"name":"Chinese herb endemic nephropathy","type":"exact"},{"name":"DEFN","type":"related"},{"name":"Danubian endemic familial nephropathy","type":"exact"},{"name":"aristolochic acid nephropathy","type":"exact"},{"name":"endemic nephropathy","type":"exact"},{"name":"nephropathia epidemica","type":"related"}],"termid":"MONDO:0007416","xrefs":{"Monarch":{"xref_id":"0007416"}}}


id: GO:0102912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-lactol + NAD = H+ + (-)-matairesinol + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-lactol dehydrogenase activity (obsolete GO:0102912)","termid":"GO:0102912"}


id: GO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-5 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-5 receptor activity","synonyms":[{"name":"IL-5 receptor activity","type":"exact"},{"name":"IL-5R","type":"exact"}],"termid":"GO:0004914"}


id: PBO:0084897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation initiation factor 3 (IF3, mIF3); evolutionarily conserved; interacts with mitochondrial ribosomal small subunit; binds to E. coli ribosomes in vitro; null mutant displays severe respiratory growth defect and elevated frequency of mitochondrial genome loss","termid":"PBO:0084897"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: PBO:0080527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 9, pseudogene","termid":"PBO:0080527"}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: MONDO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant tumor arising from trophoblastic cells in the uterus during pregnancy. Approximately half of the cases develop from a complete hydatidiform mole. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.","definition_xrefs":["NCIT:C27246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of corpus uteri","termid":"MONDO:0016273"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus choriocarcinoma","secondary_identifiers":["DOID:8188","DOID:8187","MEDGEN:234466","ONCOTREE:UCCA","UMLS:C1336904"],"synonyms":[{"name":"body of uterus choriocarcinoma (disease)","type":"exact"},{"name":"body of uterus gestational choriocarcinoma","type":"exact"},{"name":"choriocarcinoma","type":"related"},{"name":"gestational choriocarcinoma of body of uterus","type":"exact"},{"name":"gestational uterine corpus choriocarcinoma","type":"exact"},{"name":"uterine corpus gestational choriocarcinoma","type":"exact"}],"termid":"MONDO:0004491","xrefs":{"Monarch":{"xref_id":"0004491"}}}


id: GO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule epinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by epinephrine","synonyms":[{"name":"blood pressure regulation by epinephrine","type":"related"},{"name":"regulation of blood pressure by adrenaline","type":"exact"}],"termid":"GO:0003047"}


id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11756452","PMID:11713266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: PBO:0083802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein suggested to function early in the secretory pathway; inviability is suppressed by overexpression of Golgi protein Tvp23p; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and cytosol respectively; ortholog of human Kish","termid":"PBO:0083802"}


id: PBO:0049157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2B","termid":"PBO:0049157"}


id: MONDO:1010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, non-human animal","termid":"MONDO:1010069"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, non-human animal","secondary_identifiers":["OMIA:001286"],"termid":"MONDO:1010082","xrefs":{"Monarch":{"xref_id":"1010082"}}}


id: MONDO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary hormone deficiency, combined (obsolete MONDO:0000085)","termid":"MONDO:0000085","xrefs":{"Monarch":{"xref_id":"0000085"}}}


id: PBO:0049746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box transcription factor 1","termid":"PBO:0049746"}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888#Y","OMSSA:210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


id: PBO:0028289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cadmium_ion_import_into_vacuole","termid":"PBO:0028289"}


id: GO:0106030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of neuronal projections into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:bc.","GOC:aruk","PMID:12761826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection fasciculation","termid":"GO:0106030"}


id: PBO:0088780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin-like membrane trafficking protein Mug65","termid":"PBO:0088780"}


id: PBO:0040420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d1","termid":"PBO:0040420"}


id: MONDO:1010857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"},{"relation_name":"is_a","term_name":"leukodystrophy, sheep","termid":"MONDO:1011006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, sheep","secondary_identifiers":["OMIA:000578-9940"],"termid":"MONDO:1010857","xrefs":{"Monarch":{"xref_id":"1010857"}}}


id: GO:1905570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:654321","GOC:al","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of siderophore biosynthetic process","termid":"GO:1900706"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"positively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferrichrome biosynthetic process","synonyms":[{"name":"activation of ferrichrome anabolism","type":"narrow"},{"name":"activation of ferrichrome biosynthesis","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferrichrome formation","type":"narrow"},{"name":"activation of ferrichrome synthesis","type":"narrow"},{"name":"positive regulation of ferrichrome anabolism","type":"exact"},{"name":"positive regulation of ferrichrome biosynthesis","type":"exact"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferrichrome formation","type":"exact"},{"name":"positive regulation of ferrichrome synthesis","type":"exact"},{"name":"up regulation of ferrichrome anabolism","type":"exact"},{"name":"up regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferrichrome formation","type":"exact"},{"name":"up regulation of ferrichrome synthesis","type":"exact"},{"name":"up-regulation of ferrichrome anabolism","type":"exact"},{"name":"up-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferrichrome formation","type":"exact"},{"name":"up-regulation of ferrichrome synthesis","type":"exact"},{"name":"upregulation of ferrichrome anabolism","type":"exact"},{"name":"upregulation of ferrichrome biosynthesis","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferrichrome formation","type":"exact"},{"name":"upregulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905570"}


id: PBO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kappa","termid":"PBO:0044009"}


id: PBO:0063938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 3","termid":"PBO:0063938"}


id: PBO:0041427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 58","termid":"PBO:0041427"}


id: PBO:0077817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 1","termid":"PBO:0077817"}


id: GO:1990860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.","definition_xrefs":["PMID:8108735","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pho85-Pho80 CDK-cyclin complex","termid":"GO:1990860"}


id: PBO:0062382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 11 pseudogene","termid":"PBO:0062382"}


id: PBO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 2","termid":"PBO:0072316"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["PMID:10073711","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: GO:0034120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of erythrocyte aggregation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"},{"relation_name":"is_a","term_name":"regulation of erythrocyte aggregation","termid":"GO:0034118"},{"relation_name":"positively_regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte aggregation","synonyms":[{"name":"positive regulation of RBC aggregation","type":"exact"},{"name":"positive regulation of red blood cell aggregation","type":"exact"}],"termid":"GO:0034120"}


id: PBO:0029175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029175"}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: MONDO:0014631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"hypomagnesemia, seizures, and intellectual disability","secondary_identifiers":["OMIMPS:616418"],"synonyms":[{"name":"HOMGSMR","type":"related"},{"name":"hypomagnesemia, seizures, and intellectual disability","type":"exact"},{"name":"hypomagnesemia, seizures, and mental retardation","type":"exact"}],"termid":"MONDO:0014631","xrefs":{"Monarch":{"xref_id":"0014631"}}}


id: GO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by phosphopantetheinylation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein phosphopantetheinylation","synonyms":[{"name":"protein amino acid phosphopantetheinylation","type":"exact"}],"termid":"GO:0018215"}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: GO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procambium histogenesis","termid":"GO:0010067"}


id: PBO:0077800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 3 member A","termid":"PBO:0077800"}


id: GO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of male and female gametes to form a zygote.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single fertilization","secondary_identifiers":["Reactome:R-HSA-1187000"],"synonyms":[{"name":"zygote biosynthesis","type":"related"},{"name":"zygote formation","type":"related"}],"termid":"GO:0007338"}


id: PBO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.4","termid":"PBO:0001198"}


id: PBO:0076451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell activation RhoGTPase activating protein","termid":"PBO:0076451"}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034810)","termid":"GO:0034810"}


id: PBO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 192 pseudogene","termid":"PBO:0070249"}


id: PBO:0044516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase","termid":"PBO:0044516"}


id: MONDO:0013580
data:
  {"annotated_genes":["SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85889],"is_not":false,"summary":null,"term":"MONDO:0013580"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-beta deficiency is an extremely rare form of pyruvate dehydrogenase deficiency (PDHD) characterized by severe lactic acidosis, developmental delay and hypotonia.","definition_xrefs":["Orphanet:255138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005244","MONDO:0037792"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-beta deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614111","MESH:C566729","UMLS:C3279841","GARD:17236","MEDGEN:481471"],"synonyms":[{"name":"PDHBD","type":"exact"},{"name":"pyruvate dehydrogenase E1-BETA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-beta deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit beta deficiency","type":"exact"}],"termid":"MONDO:0013580","terms_by_termid":{"MONDO:0013580":null},"xrefs":{"Monarch":{"xref_id":"0013580"}}}


id: PBO:0050547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS5 biogenesis of lysosomal organelles complex 2 subunit 2","termid":"PBO:0050547"}


id: PBO:0042715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cementum protein 1","termid":"PBO:0042715"}


id: PBO:0085446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of genes in multiple nitrogen degradation pathways; contains DNA binding domain but does not appear to bind the dodecanucleotide sequence present in the promoter region of many genes involved in allantoin catabolism","termid":"PBO:0085446"}


id: MONDO:0004251
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86769,86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the small intestine. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:126832004","UMLS:C0345832","MEDGEN:91055","DOID:7505","NCIT:C4432"],"synonyms":[{"name":"neoplasm of small bowel","type":"exact"},{"name":"neoplasm of small intestine","type":"exact"},{"name":"neoplasm of the small bowel","type":"exact"},{"name":"neoplasm of the small intestine","type":"exact"},{"name":"small bowel neoplasm","type":"exact"},{"name":"small bowel tumor","type":"exact"},{"name":"small bowel tumour","type":"exact"},{"name":"small intestinal neoplasm","type":"exact"},{"name":"small intestine neoplasm","type":"exact"},{"name":"small intestine neoplasm (disease)","type":"exact"},{"name":"small intestine tumor","type":"exact"},{"name":"small intestine tumour","type":"exact"},{"name":"tumor of small bowel","type":"exact"},{"name":"tumor of small intestine","type":"exact"},{"name":"tumor of the small bowel","type":"exact"},{"name":"tumor of the small intestine","type":"exact"},{"name":"tumour of small bowel","type":"exact"},{"name":"tumour of small intestine","type":"exact"},{"name":"tumour of the small bowel","type":"exact"},{"name":"tumour of the small intestine","type":"exact"}],"termid":"MONDO:0004251","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0004251"}}}


id: MONDO:0013927
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87181],"is_not":false,"summary":null,"term":"MONDO:0013927"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005066","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 3A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C155752","MEDGEN:766843","GARD:15858","MESH:C566633","UMLS:C3553929","OMIM:614859","DOID:0080478"],"synonyms":[{"name":"PBD3A","type":"related"},{"name":"peroxisome biogenesis disorder 3A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 3","type":"related"}],"termid":"MONDO:0013927","terms_by_termid":{"MONDO:0013927":null},"xrefs":{"Monarch":{"xref_id":"0013927"}}}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: PBO:0075356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 4","termid":"PBO:0075356"}


id: PBO:0005512
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.6","termid":"PBO:0005512"}


id: PBO:0049742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding EGF like growth factor","termid":"PBO:0049742"}


id: PBO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin","termid":"PBO:0001623"}


id: PBO:0113044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated negative regulator of RNA polymerase III assembly; differentially and dynamically occupies RNA polymerase III-transcribed genes; promotes eviction of RNAPIII; occupancy depends on TFIIIB and TFIIIC, not RNAPIII; protein abundance increases in response to DNA replication stress","termid":"PBO:0113044"}


id: GO:0008199
data:
  {"annotated_genes":["SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71418],"is_not":false,"summary":null,"term":"GO:0008199"}]},"cv_name":"molecular_function","definition":"Binding to a ferric iron ion, Fe(III).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"ferric iron binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008199","terms_by_termid":{"GO:0008199":null}}


id: PBO:0040320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit delta","termid":"PBO:0040320"}


id: SO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's five prime region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_five_prime_overlap","synonyms":[{"name":"five prime-five prime overlap","type":"exact"}],"termid":"SO:0000074"}


id: PBO:0082236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucoside permease; transports maltose, maltotriose, alpha-methylglucoside, and turanose; identical to Mph2p; encoded in a subtelomeric position in a region likely to have undergone duplication","termid":"PBO:0082236"}


id: GO:1903669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["GOC:TermGenie","PMID:24390142","PMID:22711818","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chemorepellent activity (obsolete GO:1903669)","synonyms":[{"name":"activation of chemorepellant activity","type":"narrow"},{"name":"activation of chemorepellent activity","type":"narrow"},{"name":"positive regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellent activity","type":"exact"},{"name":"up-regulation of chemorepellant activity","type":"exact"},{"name":"up-regulation of chemorepellent activity","type":"exact"},{"name":"upregulation of chemorepellant activity","type":"exact"},{"name":"upregulation of chemorepellent activity","type":"exact"}],"termid":"GO:1903669"}


id: FYPO:0000474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiosis","synonyms":[{"name":"abolished meiotic nuclear division","type":"exact"},{"name":"absent meiosis","type":"exact"},{"name":"meiosis abolished","type":"exact"},{"name":"meiosis: absent","type":"related"}],"termid":"FYPO:0000474"}


id: PBO:0073485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 2","termid":"PBO:0073485"}


id: PBO:0063048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin 3","termid":"PBO:0063048"}


id: RO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of ribosomal translation of","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomally_translates_to","termid":"RO:0002513"}


id: GO:0045854
data:
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id: PBO:0108992
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase, N-terminal truncated compared to other tlh genes","termid":"PBO:0108992"}


id: MONDO:0022071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbon baby syndrome, also known as universal acquired melanosis, is a rare form of hyperpigmentation. The skin of affected infants progressively darkens over the first years of life in the absence of other symptoms. The cause of the condition is unknown.","definition_xrefs":["GARD:0001089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon baby syndrome","secondary_identifiers":["SCTID:238700008","MEDGEN:98349","UMLS:C0406419"],"synonyms":[{"name":"universal acquired melanosis","type":"related"}],"termid":"MONDO:0022071","xrefs":{"Monarch":{"xref_id":"0022071"}}}


id: MONDO:0003107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant neoplasms which arise or occur within the intracranial cavity below the tentorium cerebelli. This includes neoplasms within the brain and/or surrounding spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infratentorial cancer","secondary_identifiers":["UMLS:C0751593","DOID:4706","MEDGEN:199689","MESH:D015192","NCIT:C4966","NCIT:C3139"],"synonyms":[{"name":"brain neoplasm, infratentorial","type":"broad"},{"name":"infratentorial neoplasms, malignant","type":"exact"},{"name":"malignant infratentorial neoplasm","type":"exact"},{"name":"malignant infratentorial tumor","type":"exact"},{"name":"malignant infratentorial tumors","type":"exact"},{"name":"malignant infratentorial tumour","type":"exact"},{"name":"malignant infratentorial tumours","type":"exact"}],"termid":"MONDO:0003107","xrefs":{"Monarch":{"xref_id":"0003107"}}}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: PBO:0004260
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof10","termid":"PBO:0004260"}


id: GO:0140206
data:
  {"annotated_genes":["SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71794],"is_not":false,"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"dipeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140206","terms_by_termid":{"GO:0140206":null}}


id: PBO:0088507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose phosphate 3-epimerase Rpe1","termid":"PBO:0088507"}


id: PBO:0040173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 4","termid":"PBO:0040173"}


id: PBO:0063314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated HIP1 interacting lncRNA","termid":"PBO:0063314"}


id: GO:0007005
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id: MONDO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive malignant embryonal neoplasm of the central nervous system occurring in children. It is characterized by the presence of neuroepithelial cells which form papillary, trabecular, or tubular structures and absence of C19MC amplification. Symptoms include headache, nausea, and vomiting.","definition_xrefs":["NCIT:C4327"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medulloepithelioma","secondary_identifiers":["MEDGEN:1702218","Orphanet:251883","SCTID:715903004","UMLS:C5231013","DOID:4790","GARD:20721","ONCOTREE:MDEP","icd11.foundation:1078680756"],"synonyms":[{"name":"Diktyoma, malignant","type":"exact"},{"name":"MDEP","type":"related"},{"name":"central nervous system medulloepithelioma","type":"exact"},{"name":"medulloepithelioma NOS (morphologic abnormality)","type":"exact"},{"name":"medulloepithelioma of the central nervous system","type":"exact"},{"name":"medulloepithelioma, central nervous system","type":"exact"}],"termid":"MONDO:0003144","xrefs":{"Monarch":{"xref_id":"0003144"}}}


id: PBO:0056181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor G","termid":"PBO:0056181"}


id: PBO:0116721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain cAMP effector 3","termid":"PBO:0116721"}


id: PBO:0110033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP90AB1 associated lncRNA 1","termid":"PBO:0110033"}


id: PBO:0034359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syngeny_relationship_with","termid":"PBO:0034359"}


id: GO:2001050
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of tendon cell differentiation","termid":"GO:2001049"},{"relation_name":"negatively_regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tendon cell differentiation","synonyms":[{"name":"negative regulation of muscle attachment cell differentiation","type":"exact"},{"name":"negative regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001050"}


id: PBO:0053873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1149","termid":"PBO:0053873"}


id: GO:0051241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"negatively_regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of multicellular organismal process","synonyms":[{"name":"down regulation of multicellular organismal process","type":"exact"},{"name":"down-regulation of multicellular organismal process","type":"exact"},{"name":"downregulation of multicellular organismal process","type":"exact"},{"name":"inhibition of multicellular organismal process","type":"narrow"}],"termid":"GO:0051241"}


id: PBO:0054860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2274","termid":"PBO:0054860"}


id: SO:0001379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_taurinomethyl_2_thiouridineis a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_taurinomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:099"],"synonyms":[{"name":"5-taurinomethyl-2-thiouridine","type":"exact"},{"name":"five taurinomethyl two thiouridine","type":"exact"},{"name":"tm5s2U","type":"exact"}],"termid":"SO:0001379"}


id: MONDO:0010192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Waardenburg syndrome type 4 (Waardenburg-Shah syndrome) caused by mutations in EDNRB.","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg-Shah syndrome","termid":"MONDO:0019518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"Waardenburg syndrome type 4A","secondary_identifiers":["OMIM:277580","GARD:15245","MEDGEN:341244","UMLS:C1848519","DOID:0110953"],"synonyms":[{"name":"EDNRB Waardenburg syndrome","type":"exact"},{"name":"Shah-Waardenburg syndrome","type":"related"},{"name":"WS4A","type":"exact"},{"name":"Waardenburg syndrome caused by mutation in EDNRB","type":"exact"},{"name":"Waardenburg syndrome type 4A","type":"exact"},{"name":"Waardenburg syndrome type IVA","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease type 4A","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease, type 4A","type":"related"},{"name":"Waardenburg syndrome, type 4A","type":"related"},{"name":"Waardenburg-Shah syndrome","type":"related"},{"name":"Ws4","type":"related"}],"termid":"MONDO:0010192","xrefs":{"Monarch":{"xref_id":"0010192"}}}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: MONDO:0018978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related mediastinitis","secondary_identifiers":["MEDGEN:82683","MedDRA:10027074","GARD:8337","NORD:1146","UMLS:C0264573","icd11.foundation:123840075","MESH:C536136","Orphanet:63999","icd11.foundation:791747341"],"synonyms":[{"name":"Fibrosing Mediastinitis","type":"exact"},{"name":"fibrosing mediastinitis","type":"exact"},{"name":"idiopathic mediastinal fibrosis","type":"related"},{"name":"mediastinal fibrosis","type":"exact"},{"name":"sclerosing mediastinitis","type":"exact"}],"termid":"MONDO:0018978","xrefs":{"Monarch":{"xref_id":"0018978"}}}


id: MONDO:0013172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome with central nervous system malformations characterized by severe developmental delay, neonatal hypotonia, seizures, optic nerve hypoplasia and distinct central nervous system malformations including extensive bilateral polymicrogyria, dysplastic or absent corpus callosum and malformed brainstem with loss of demarcation of the pontomedullary junction.","definition_xrefs":["Orphanet:250972"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","termid":"MONDO:0015220"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","termid":"MONDO:0015310"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria with optic nerve hypoplasia","secondary_identifiers":["MESH:C567715","UMLS:C2750798","OMIM:613180","MEDGEN:442565","GARD:20687"],"synonyms":[{"name":"CDCBM8","type":"related"},{"name":"cortical dysplasia, Complex, with Other brain malformations 8","type":"related"},{"name":"cortical dysplasia, complex, with other brain malformations 8","type":"related"},{"name":"polymicrogyria with optic nerve hypoplasia","type":"exact"}],"termid":"MONDO:0013172","xrefs":{"Monarch":{"xref_id":"0013172"}}}


id: PBO:0082051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase of the conserved RecQ family; involved in Pso2p-mediated interstrand crosslink repair; acts with Rad4p in nucleotide-excision repair; binds telomeres, modulates telomerase activity with Pif1p and inhibits telomere addition to dsDNA breaks; role in telomerase-independent telomere maintenance; lacks ssDNA annealing and strand exchange activities; human RecQL4, a structural and functional homolog, is involved in Rothmund-Thomson, Baller-Gerold and RAPADILINO syndromes","termid":"PBO:0082051"}


id: MONDO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic vasculitis (obsolete MONDO:0017038)","secondary_identifiers":["Orphanet:264973"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic vasculitis","type":"exact"}],"termid":"MONDO:0017038","xrefs":{"Monarch":{"xref_id":"0017038"}}}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: GO:0019160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + nicotinamide mononucleotide = D-ribose 5-phosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:23140","EC:3.2.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"NMN nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R01270","MetaCyc:NMNNUCLEOSID-RXN"],"synonyms":[{"name":"NMN glycohydrolase activity","type":"related"},{"name":"NMNGhase activity","type":"related"},{"name":"NMNase activity","type":"related"},{"name":"nicotinamide mononucleotidase activity","type":"related"},{"name":"nicotinamide mononucleotide nucleosidase activity","type":"related"},{"name":"nicotinamide-nucleotide phosphoribohydrolase activity","type":"related"}],"termid":"GO:0019160"}


id: SO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a mobile element when comparing a reference sequence (has mobile element) to a individual sequence (does not have mobile element).","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deletion","termid":"SO:0000159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_deletion","synonyms":[{"name":"mobile element deletion","type":"exact"}],"termid":"SO:0002066"}


id: MONDO:0018922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cold agglutinin disease is a type of autoimmune hemolytic anemia defined by the presence of cold autoantibodies (autoantibodies which are active at temperatures below 30B0C).","definition_xrefs":["Orphanet:56425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, cold type","termid":"MONDO:0016450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"cold agglutinin disease","secondary_identifiers":["UMLS:C1264008","GARD:6130","MEDGEN:688249","NANDO:1200307","NANDO:2200618","NORD:775","SCTID:127055007"],"synonyms":[{"name":"CAD","type":"exact"},{"name":"CAS","type":"exact"},{"name":"anemia, hemolytic, cold antibody","type":"related"},{"name":"chronic cold agglutinin disease","type":"exact"},{"name":"cold agglutinin syndrome","type":"exact"},{"name":"cold antibody disease","type":"related"},{"name":"cold antibody hemolytic anaemia","type":"related"},{"name":"cold antibody hemolytic anemia","type":"related"}],"termid":"MONDO:0018922","xrefs":{"Monarch":{"xref_id":"0018922"}}}


id: FYPO:0007791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to magnesium starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:33970532","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to magnesium starvation","synonyms":[{"name":"RNA absent from cell during cellular response to magnesium starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to magnesium starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during magnesium depletion","type":"exact"},{"name":"RNA absent from cell during magnesium deprivation","type":"exact"},{"name":"RNA absent from cell during magnesium starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to magnesium starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to magnesium starvation","type":"exact"}],"termid":"FYPO:0007791"}


id: GO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the labyrinthine layer of the placenta progresses, from its formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer development","termid":"GO:0060711"}


id: GO:0120078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the formation of a blood vessel network.","definition_xrefs":["GOC:cvs","PMID:28264837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"angiogenic sprout fusion","termid":"GO:0120077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in sprouting angiogenesis","synonyms":[{"name":"cell adhesion involved in blood vessel anastomosis","type":"exact"},{"name":"cell adhesion involved in vascular anastomosis","type":"related"}],"termid":"GO:0120078"}


id: MONDO:0014917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CACNA1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"CACNA1A-related complex neurodevelopmental disorder","termid":"MONDO:0100254"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027","MONDO:0004736","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 42","secondary_identifiers":["DOID:0080454","MEDGEN:934683","OMIM:617106","GARD:16191","UMLS:C4310716"],"synonyms":[{"name":"CACNA1A early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE42","type":"exact"},{"name":"EIEE42","type":"exact"},{"name":"developmental and epileptic encephalopathy 42","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CACNA1A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 42","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 42; EIEE42","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 42","type":"exact"}],"termid":"MONDO:0014917","xrefs":{"Monarch":{"xref_id":"0014917"}}}


id: GO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory gaseous exchange by respiratory system","synonyms":[{"name":"breathing","type":"broad"},{"name":"respiration","type":"broad"}],"termid":"GO:0007585"}


id: PBO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 31","termid":"PBO:0071613"}


id: FYPO:0005678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"ubiquitinated protein absent from cell during vegetative growth","synonyms":[{"name":"ubiquitinated protein absent from cell during mitotic cell cycle","type":"related"},{"name":"ubiquitylated protein absent from cell during vegetative growth","type":"exact"},{"name":"undetectable cellular ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005678"}


id: GO:0110079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:27748453","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of placenta blood vessel development","termid":"GO:0110079"}


id: PBO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 35","termid":"PBO:0072260"}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: MONDO:1012739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xanthinuria that occurs in dogs due to a mutation in the MOCOS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"xanthinuria, dog","termid":"MONDO:1011623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, type II, dog","secondary_identifiers":["OMIA:001819-9615"],"synonyms":[{"name":"xanthinuria, type II, dog","type":"exact"}],"termid":"MONDO:1012739","xrefs":{"Monarch":{"xref_id":"1012739"}}}


id: PBO:0113032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; enzyme preparation shows antitumor activity; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication","termid":"PBO:0113032"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:jbu","PMID:22527283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: FYPO:0006979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular coenzyme Q10 level","synonyms":[{"name":"increased cellular UQ10 level","type":"exact"},{"name":"increased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"increased cellular ubiquinone 10 level","type":"exact"}],"termid":"FYPO:0006979"}


id: GO:0035385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a SLIT protein binding to a Roundabout (ROBO) family receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Roundabout signaling pathway","synonyms":[{"name":"ROBO signaling pathway","type":"exact"},{"name":"ROBO/SLIT signaling pathway","type":"exact"},{"name":"Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035385"}


id: PBO:0049297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 1","termid":"PBO:0049297"}


id: PBO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 1","termid":"PBO:0060859"}


id: PBO:0031596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_telophase","termid":"PBO:0031596"}


id: FYPO:0001121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered, but cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lumpy","type":"related"},{"name":"vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001121"}


id: GO:0019036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in transcribing the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral transcriptional complex","termid":"GO:0019036"}


id: PBO:0039971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 2","termid":"PBO:0039971"}


id: MONDO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tertiary syphilis that is characterized by granulomatous lesions, called gummas, which are characterized by a center of necrotic tissue with a rubbery texture. They form in the liver, bones, and testes but may affect any organ.","definition_xrefs":["DOID:0050584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gummatous syphilis","secondary_identifiers":["icd11.foundation:1630654348"],"termid":"MONDO:0000363","xrefs":{"Monarch":{"xref_id":"0000363"}}}


id: FYPO:0001137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 25S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased mature 25S rRNA level","synonyms":[{"name":"decreased 25S rRNA level","type":"broad"},{"name":"decreased mature 25S rRNA accumulation","type":"related"},{"name":"decreased mature 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 25S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 25S rRNA transcript level","type":"exact"},{"name":"reduced mature 25S rRNA level","type":"exact"}],"termid":"FYPO:0001137"}


id: PBO:0112593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane adaptor Erg28 protein","termid":"PBO:0112593"}


id: PBO:0085091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085091"}


id: PBO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.5.1","termid":"PBO:0000953"}


id: PBO:0058537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6082","termid":"PBO:0058537"}


id: MONDO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary familial polycythemia is an inherited hematological disorder resulting from mutations in the erythropoietin (EPO) receptor and is characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production in the presence of low EPO levels.","definition_xrefs":["Orphanet:90042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary familial polycythemia due to EPO receptor mutation","secondary_identifiers":["GARD:9843","DOID:0060652","MEDGEN:1641215","icd11.foundation:962836252","OMIM:133100","SCTID:17342003","ICD9:289.6","UMLS:C4551637"],"synonyms":[{"name":"ECYT1","type":"related"},{"name":"EPOR familial polycythemia","type":"exact"},{"name":"PFCP","type":"exact"},{"name":"autosomal dominant benign erythrocytosis","type":"related"},{"name":"congenital erythrocytosis due to erythropoietin receptor mutation","type":"exact"},{"name":"congenital polycythemia due to erythropoietin receptor mutation","type":"exact"},{"name":"erythrocytosis autosomal dominant benign","type":"related"},{"name":"erythrocytosis, autosomal dominant benign","type":"related"},{"name":"erythrocytosis, familial, 1","type":"exact"},{"name":"erythrocytosis, familial, type 1","type":"exact"},{"name":"erythrocytosis, somatic","type":"exact"},{"name":"familial erythrocytosis","type":"exact"},{"name":"familial erythrocytosis 1","type":"exact"},{"name":"familial erythrocytosis type 1","type":"exact"},{"name":"familial erythrocytosis, 1","type":"exact"},{"name":"familial polycythemia caused by mutation in EPOR","type":"exact"},{"name":"polycythemia, primary familial and congenital","type":"related"},{"name":"primary congenital erythrocytosis","type":"exact"},{"name":"primary familial and congenital polycythemia","type":"exact"},{"name":"primary familial polycythemia","type":"related"}],"termid":"MONDO:0007572","xrefs":{"Monarch":{"xref_id":"0007572"}}}


id: GO:0140779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of XCL1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:7973732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"XCL1 production","secondary_identifiers":["Wikipedia:XCL1"],"synonyms":[{"name":"lymphotactin production","type":"exact"}],"termid":"GO:0140779"}


id: PBO:0089248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC SUMO ligase subunit Nse2","termid":"PBO:0089248"}


id: MONDO:0957530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 5","secondary_identifiers":["UMLS:C5830615","OMIM:620442","MEDGEN:1841251"],"termid":"MONDO:0957530","xrefs":{"Monarch":{"xref_id":"0957530"}}}


id: GO:0031580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that establishes the spatial arrangement of membrane rafts within a cellular membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"is_a","term_name":"membrane raft localization","termid":"GO:0051665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"membrane raft distribution","synonyms":[{"name":"lipid raft distribution","type":"exact"}],"termid":"GO:0031580"}


id: MONDO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dryness of the eye due to inadequate production of tears. Causes include vitamin A deficiency, Sjogren syndrome, rheumatoid arthritis, systemic lupus erythematosus, and scleroderma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dry eye syndrome","termid":"MONDO:0006733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"xerophthalmia","secondary_identifiers":["SCTID:363677007","UMLS:C0022575","ICD9:375.15","DOID:10138","MEDGEN:9620","MESH:D014985","NCIT:C34503"],"synonyms":[{"name":"conjunctival xerosis","type":"exact"}],"termid":"MONDO:0000948","xrefs":{"Monarch":{"xref_id":"0000948"}}}


id: PBO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 1","termid":"PBO:0043133"}


id: GO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"}


id: MONDO:1010587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, pig","secondary_identifiers":["OMIA:000424-9823"],"termid":"MONDO:1010587","xrefs":{"Monarch":{"xref_id":"1010587"}}}


id: PBO:0073911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 2","termid":"PBO:0073911"}


id: MONDO:0013046
data:
  {"annotated_genes":["SJAG_02369","SJAG_02107","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85120,85121,85122],"is_not":false,"summary":null,"term":"MONDO:0013046"}]},"cv_name":"mondo","definition":"Muscle beta-enolase deficiency is a glycolysis disorder reported in one patient to date and characterized clinically by exercise intolerance and myalgia due to severe enolase deficiency in muscle.","definition_xrefs":["Orphanet:99849"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"glycogen storage disease due to muscle beta-enolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567861","GARD:2125","icd11.foundation:821809975","MEDGEN:442873","NANDO:1200835","UMLS:C2752027","OMIM:612932"],"synonyms":[{"name":"GSD 13","type":"related"},{"name":"GSD due to muscle beta-enolase deficiency","type":"exact"},{"name":"GSD13","type":"related"},{"name":"GSDXIII","type":"exact"},{"name":"enolase 3 deficiency","type":"related"},{"name":"enolase-Beta deficiency","type":"related"},{"name":"glycogen storage disease 13","type":"related"},{"name":"glycogen storage disease XIII","type":"related"},{"name":"glycogen storage disease due to muscle beta-enolase deficiency","type":"exact"},{"name":"glycogen storage disease type 13","type":"exact"},{"name":"glycogenosis due to muscle beta-enolase deficiency","type":"exact"},{"name":"glycogenosis type 13","type":"exact"},{"name":"muscle enolase deficiency","type":"exact"},{"name":"muscular enolase deficiency","type":"exact"}],"termid":"MONDO:0013046","terms_by_termid":{"MONDO:0013046":null},"xrefs":{"Monarch":{"xref_id":"0013046"}}}


id: PBO:0042283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1c molecule","termid":"PBO:0042283"}


id: MONDO:0006503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic ataxia (obsolete MONDO:0006503)","termid":"MONDO:0006503","xrefs":{"Monarch":{"xref_id":"0006503"}}}


id: PBO:0054708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2117","termid":"PBO:0054708"}


id: MONDO:0019454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by the presence of 5-19% myeloblasts in the bone marrow or 2-19% blasts in the peripheral blood. It includes two categories: myelodysplastic syndrome with excess blasts-1 and myelodysplastic syndrome with excess blasts-2.","definition_xrefs":["NCIT:C7506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with excess blasts","secondary_identifiers":["GARD:19070","ICDO:9983/3","SCTID:398623004","MEDGEN:8066","EFO:0003811","Orphanet:86839","UMLS:C0002894","MedDRA:10038270","MESH:D000754"],"synonyms":[{"name":"MDS-EB","type":"exact"},{"name":"RAEB","type":"exact"},{"name":"myelodysplastic syndrome with Excess blasts","type":"exact"},{"name":"refractory Anaemia with Excess blasts","type":"exact"},{"name":"refractory Anaemia with an Excess of blasts","type":"exact"},{"name":"refractory Anemia with Excess blasts","type":"exact"},{"name":"refractory Anemia with an Excess of blasts","type":"exact"}],"termid":"MONDO:0019454","xrefs":{"Monarch":{"xref_id":"0019454"}}}


id: PBO:0072969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 1","termid":"PBO:0072969"}


id: MONDO:0023221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher ichthyosis restrictive dermopathy","termid":"MONDO:0023221","xrefs":{"Monarch":{"xref_id":"0023221"}}}


id: GO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:tair_curators","PMID:16461380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lead ion","termid":"GO:0010288"}


id: GO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fluid transport","termid":"GO:0042044"}


id: PBO:0116476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-gene toxin-antidote meiotic driver Tdk1","termid":"PBO:0116476"}


id: PBO:0071543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 8","termid":"PBO:0071543"}


id: MONDO:0019082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous pemphigoid (BP) is the most common form of autoimmune bullous dermatosis.","definition_xrefs":["Orphanet:703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"bullous pemphigoid","secondary_identifiers":["NANDO:1200633","MEDGEN:10620","DOID:8506","GARD:5972","ICD10CM:L12.0","NANDO:1200632","SCTID:77090002","EFO:0007187","NCIT:C84389","MESH:D010391","ICD9:694.5","UMLS:C0030805","icd11.foundation:233308710"],"synonyms":[{"name":"Old Age pemphigus","type":"related"},{"name":"Parapemphigus","type":"related"},{"name":"benign pemphigus","type":"related"},{"name":"bullous pemphigoid","type":"exact"},{"name":"senile dermatitis herpetiformis","type":"related"}],"termid":"MONDO:0019082","xrefs":{"Monarch":{"xref_id":"0019082"}}}


id: MONDO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous granular cell tumor","secondary_identifiers":["SCTID:254763007","UMLS:C0346060","NCIT:C5617","DOID:2410","ICD9:215.9","MEDGEN:138035"],"synonyms":[{"name":"cutaneous granular cell neoplasm","type":"exact"},{"name":"cutaneous granular cell tumor","type":"exact"},{"name":"granular cell neoplasm of skin","type":"exact"},{"name":"granular cell neoplasm of the skin","type":"exact"},{"name":"granular cell skin tumor","type":"exact"},{"name":"granular cell skin tumour","type":"exact"},{"name":"granular cell tumor of skin","type":"exact"},{"name":"granular cell tumor of the skin","type":"exact"},{"name":"granular cell tumor of zone of skin","type":"exact"},{"name":"granular cell tumour of skin","type":"exact"},{"name":"granular cell tumour of the skin","type":"exact"},{"name":"granular cell tumour of zone of skin","type":"exact"},{"name":"skin granular cell neoplasm","type":"exact"},{"name":"skin granular cell tumor","type":"related"},{"name":"skin granular cell tumour","type":"related"},{"name":"zone of skin granular cell tumor","type":"exact"},{"name":"zone of skin granular cell tumour","type":"exact"}],"termid":"MONDO:0002291","xrefs":{"Monarch":{"xref_id":"0002291"}}}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: PBO:0042928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 8","termid":"PBO:0042928"}


id: GO:2001170
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170","terms_by_termid":{"GO:1905707":null}}


id: PBO:0080553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 12","termid":"PBO:0080553"}


id: MONDO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lymphoma that arises from the trachea. Signs and symptoms include dyspnea, cough, wheezing, and stridor.","definition_xrefs":["NCIT:C6248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal cancer","termid":"MONDO:0001407"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"tracheal lymphoma","secondary_identifiers":["MEDGEN:277825","UMLS:C1336773","DOID:12001"],"synonyms":[{"name":"lymphoma of the trachea","type":"exact"},{"name":"lymphoma of trachea","type":"exact"},{"name":"primary tracheal lymphoma","type":"exact"},{"name":"trachea lymphoma","type":"exact"},{"name":"tracheal lymphoma","type":"exact"}],"termid":"MONDO:0001417","xrefs":{"Monarch":{"xref_id":"0001417"}}}


id: MOD:00191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to (Z)-2,3-didehydrotyrosine.","definition_xrefs":["PubMed:1347277","PubMed:9631087","RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated tyrosine","termid":"MOD:00706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-2,3-didehydrotyrosine","synonyms":[{"name":"(2Z)-2-amino-3-(4-hydroxyphenyl)prop-2-enoic acid","type":"exact"},{"name":"(Z)-2,3-didehydrogenated tyrosine","type":"exact"},{"name":"(Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"},{"name":"MOD_RES (Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"Z-dHTyr","type":"exact"},{"name":"amino-(para-hydroxybenzylidenyl)acetic acid","type":"exact"},{"name":"cis-dehydrotyrosine","type":"exact"},{"name":"green fluorescent protein chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein chromophore","type":"exact"}],"termid":"MOD:00191"}


id: PBO:0082277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate phosphoribosyl transferase; transferase of the tryptophan biosynthetic pathway; catalyzes the phosphoribosylation of anthranilate; subject to the general control system of amino acid biosynthesis","termid":"PBO:0082277"}


id: PBO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 3","termid":"PBO:0046120"}


id: GO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration, open tracheal system","synonyms":[{"name":"tracheal cell migration","type":"broad"},{"name":"tracheal epithelial cell migration","type":"related"}],"termid":"GO:0007427"}


id: GO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung growth","termid":"GO:0060437"}


id: PBO:0081569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 496","termid":"PBO:0081569"}


id: PBO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDNK gluconokinase","termid":"PBO:0050883"}


id: MONDO:0013158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the LARGE gene. It is associated with characteristic brain and eye malformations, profound mental retardation, and death usually in the first years of life.","definition_xrefs":["NCIT:C126743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6","secondary_identifiers":["UMLS:C3150414","DOID:0111242","GARD:15626","OMIM:613154","MEDGEN:461764"],"synonyms":[{"name":"MDDGA6","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, large-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 6","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 6","type":"related"}],"termid":"MONDO:0013158","xrefs":{"Monarch":{"xref_id":"0013158"}}}


id: PBO:0067042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 60, pseudogene","termid":"PBO:0067042"}


id: PBO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_initiation_of_premeiotic_DNA_replication","termid":"PBO:0031592"}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: PR:Q9UT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.03c gene.","definition_xrefs":["UniProtKB:Q9UT68","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.03c","synonyms":[{"name":"Spom972h-SPCC4F11.03c","type":"exact"}],"termid":"PR:Q9UT68"}


id: PBO:0090426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase E","termid":"PBO:0090426"}


id: PBO:0059845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 pseudogene 1","termid":"PBO:0059845"}


id: PBO:0086182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation","termid":"PBO:0086182"}


id: GO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075333)","termid":"GO:0075333"}


id: PBO:0110973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog, implicated in transcription or signalling, possibly phosphate starvation response","termid":"PBO:0110973"}


id: MONDO:1010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetradysmelia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetradysmelia, non-human animal","secondary_identifiers":["OMIA:002297"],"termid":"MONDO:1010163","xrefs":{"Monarch":{"xref_id":"1010163"}}}


id: MONDO:0000636
data:
  {"annotated_genes":["SJAG_02855","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the musculoskeletal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"musculoskeletal system benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060099","NCIT:C166356","UMLS:C5237920","MEDGEN:1709701"],"synonyms":[{"name":"musculoskeletal system benign neoplasm","type":"exact"}],"termid":"MONDO:0000636","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000636"}}}


id: MONDO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 15q24 microdeletion syndrome (obsolete MONDO:0019785)","termid":"MONDO:0019785","xrefs":{"Monarch":{"xref_id":"0019785"}}}


id: PBO:0071941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 18","termid":"PBO:0071941"}


id: PR:Q9URU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication ATP-dependent helicase/nuclease DNA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03776","PANTHER:PTHR10887:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATP-dependent helicase/nuclease dna2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.04c","secondary_identifiers":["UniProtKB:Q9URU2"],"synonyms":[{"name":"Spom972h-DNA2","type":"exact"}],"termid":"PR:Q9URU2"}


id: GO:0071764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear outer membrane organization","synonyms":[{"name":"nuclear outer membrane organisation","type":"exact"},{"name":"nuclear outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0071764"}


id: GO:2000185
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99395],"is_not":false,"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate transport","termid":"GO:0010966"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of phosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000185","terms_by_termid":{"GO:2000185":null}}


id: FYPO:0006668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during G0 phase in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology during G0","synonyms":[{"name":"normal nuclear morphology during cell quiescence","type":"exact"},{"name":"normal nuclear morphology during quiescence","type":"exact"}],"termid":"FYPO:0006668"}


id: GO:2001043
data:
  {"annotated_genes":["SJAG_02645","SJAG_01774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89687,107968],"is_not":false,"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01774":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cell separation after cytokinesis","type":"related"},{"name":"positive regulation of cytokinetic cell separation","type":"related"}],"termid":"GO:2001043","terms_by_termid":{"GO:2001043":null}}


id: PBO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase","termid":"PBO:0003314"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: PBO:0045355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate N-acetylglucosaminephosphotransferase 1","termid":"PBO:0045355"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: FYPO:0007373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abnormal histone methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at silent mating-type cassette during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007373"}


id: PBO:0075876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL3 antisense RNA 1","termid":"PBO:0075876"}


id: PBO:0003568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane receptor Wsc1 (predicted)","termid":"PBO:0003568"}


id: MONDO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"latent syphilis","termid":"MONDO:0005822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent early syphilis","secondary_identifiers":["UMLS:C0275842","MEDGEN:546880","SCTID:186867005","icd11.foundation:1768103550"],"synonyms":[{"name":"latent early syphilis","type":"exact"}],"termid":"MONDO:0040922","xrefs":{"Monarch":{"xref_id":"0040922"}}}


id: PR:Q9P7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.08c","secondary_identifiers":["UniProtKB:Q9P7S5"],"synonyms":[{"name":"Spom972h-USP20","type":"exact"},{"name":"deubiquitinating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S5"}


id: MONDO:0800311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital unilateral aplasia of","secondary_identifiers":["UMLS:C5393224","MEDGEN:1712847"],"synonyms":[{"name":"CUAVD","type":"exact"}],"termid":"MONDO:0800311","xrefs":{"Monarch":{"xref_id":"0800311"}}}


id: MONDO:0019526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythema elevatum diutinum (EED) is a distinctive form of chronic cutaneous vasculitis, belonging to the group of the neutrophilic dermatoses.","definition_xrefs":["Orphanet:90000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema elevatum diutinum","secondary_identifiers":["GARD:8653","DOID:0060567","MedDRA:10056968","MESH:C535509","ICD10CM:L95.1","ICD9:695.89","UMLS:C0263398","icd11.foundation:754210950","MEDGEN:75517","SCTID:58872001"],"termid":"MONDO:0019526","xrefs":{"Monarch":{"xref_id":"0019526"}}}


id: GO:0047019
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91784],"is_not":false,"summary":null,"term":"GO:0047019"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-ethanol + NADP+ = (indol-3-yl)acetaldehyde + H+ + NADPH.","definition_xrefs":["EC:1.1.1.191","RHEA:17037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetaldehyde reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.191-RXN","KEGG_REACTION:R02680"],"synonyms":[{"name":"(indol-3-yl)ethanol:NADP+ oxidoreductase activity","type":"related"},{"name":"indole-3-ethanol:NADP+ oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"}],"termid":"GO:0047019","terms_by_termid":{"GO:0047019":null}}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: MONDO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 1 in which the cause of the disease is a mutation in the LITAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1C","secondary_identifiers":["icd11.foundation:1224517226","DOID:0110151","GARD:1247","OMIM:601098","Orphanet:101083","UMLS:C0270913","MESH:C537984","MEDGEN:75728"],"synonyms":[{"name":"CMT 1C","type":"related"},{"name":"CMT slow nerve conduction type C","type":"exact"},{"name":"CMT, slow nerve conduction type C","type":"related"},{"name":"CMT1C","type":"exact"},{"name":"Charcot Marie Tooth disease type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in LITAF","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1C","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1C","type":"related"},{"name":"HMSN 1C","type":"related"},{"name":"HMSN IC","type":"exact"},{"name":"HMSN1C","type":"exact"},{"name":"LITAF Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"neuropathy hereditary motor and sensory type 1C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 1C","type":"related"}],"termid":"MONDO:0010995","xrefs":{"Monarch":{"xref_id":"0010995"}}}


id: GO:1902521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an etoposide stimulus.","definition_xrefs":["GOC:dw","GOC:TermGenie","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to etoposide","termid":"GO:1902521"}


id: PBO:0029324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_G2_phase","termid":"PBO:0029324"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["GOC:krc","GOC:tb","GOC:ascb_2009","PMID:22809326","GOC:dph","PMID:10521503","PMID:29367433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: PBO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O3B","termid":"PBO:0047823"}


id: FYPO:0004755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the minus ends of microtubules is abnormal.","definition_xrefs":["PMID:25987607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to microtubule minus-end","synonyms":[{"name":"abnormal protein localisation to microtubule minus-end","type":"exact"},{"name":"abnormal protein localization to microtubule minus end","type":"exact"},{"name":"abnormal protein localization to microtubule minus-end during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule minus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004755"}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: GO:0097181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor V (F5); formation of the complex inhibits the serine protease activity of coagulation factor V.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor V complex","synonyms":[{"name":"PCI-coagulation factor V complex","type":"exact"},{"name":"SERPINA5-coagulation factor V complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor V complex","type":"exact"},{"name":"protein C inhibitor-F5 complex","type":"exact"},{"name":"serpin A5-coagulation factor V complex","type":"exact"}],"termid":"GO:0097181"}


id: GO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of vacuolar membrane (obsolete GO:0000306)","synonyms":[{"name":"extrinsic to vacuolar membrane","type":"exact"}],"termid":"GO:0000306"}


id: GO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell activation process that occurs in thrombocytes and consists of a series of progressive, overlapping events including shape change, adhesiveness, and aggregation, which, when carried through to completion, lead to the formation of a stable hemostatic plug. Thrombocytes are nucleated cells found in non-mammalian vertebrates and are involved in hemostasis. They are the functional equivalent of the non-nucleated platelets found in mammals.","definition_xrefs":["PMID:20180901","PMID:15634265","GOC:mah","PMID:10606877","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte activation","synonyms":[{"name":"blood coagulation, thrombocyte activation","type":"exact"}],"termid":"GO:0071892"}


id: GO:1902027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cartilage condensation.","definition_xrefs":["GOC:TermGenie","PMID:17202865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cartilage condensation","termid":"GO:1902026"},{"relation_name":"positively_regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cartilage condensation","synonyms":[{"name":"activation of cartilage condensation","type":"narrow"},{"name":"up regulation of cartilage condensation","type":"exact"},{"name":"up-regulation of cartilage condensation","type":"exact"},{"name":"upregulation of cartilage condensation","type":"exact"}],"termid":"GO:1902027"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: PBO:0086274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with an N-terminal kelch-like domain; putative negative regulator of early meiotic gene expression; required, with Mds3p, for growth under alkaline conditions; PMD1 has a paralog, MDS3, that arose from the whole genome duplication","termid":"PBO:0086274"}


id: GO:0160185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase C.","definition_xrefs":["PMID:28130414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phospholipase C activator activity","termid":"GO:0160185"}


id: MONDO:0013973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 5, hair/nail type","secondary_identifiers":["MEDGEN:767022","OMIM:614927","UMLS:C3554108","GARD:18063","DOID:0111657"],"synonyms":[{"name":"ECTD5","type":"exact"},{"name":"ectodermal dysplasia 5, hair/nail type","type":"exact"}],"termid":"MONDO:0013973","xrefs":{"Monarch":{"xref_id":"0013973"}}}


id: PBO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase (predicted)","termid":"PBO:0005081"}


id: MONDO:1011849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myasthenia, non-human animal","secondary_identifiers":["OMIA:000684"],"termid":"MONDO:1011849","xrefs":{"Monarch":{"xref_id":"1011849"}}}


id: GO:0072136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a metanephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchymal cell proliferation involved in metanephros development","termid":"GO:0072136"}


id: PATO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001228 dull (obsolete PATO:0001228)","termid":"PATO:0001228"}


id: MONDO:0054726
data:
  {"annotated_genes":["SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85179],"is_not":false,"summary":null,"term":"MONDO:0054726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 22","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1618089","GARD:16245","DOID:0070177","OMIM:617706","UMLS:C4540179"],"synonyms":[{"name":"SPGF22","type":"related"},{"name":"spermatogenic failure 22","type":"exact"}],"termid":"MONDO:0054726","terms_by_termid":{"MONDO:0054726":null},"xrefs":{"Monarch":{"xref_id":"0054726"}}}


id: PBO:0043735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 14","termid":"PBO:0043735"}


id: PBO:0052045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1 pseudogene 1","termid":"PBO:0052045"}


id: PR:O14012
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.09 gene.","definition_xrefs":["UniProtKB:O14012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.09","synonyms":[{"name":"Spom972h-SPAC29A4.09","type":"exact"}],"termid":"PR:O14012"}


id: PBO:0063963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pipecolic acid and sarcosine oxidase","termid":"PBO:0063963"}


id: PBO:0044994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH1 antisense RNA 1","termid":"PBO:0044994"}


id: MONDO:0000863
data:
  {"annotated_genes":["SJAG_00319","SJAG_04473","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86854,86853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"}]},"cv_name":"mondo","definition":"Mitochondrial myopathy and sideroblastic anemia belongs to the heterogeneous family of metabolic myopathies. It is characterized by progressive exercise intolerance manifesting in childhood, onset of sideroblastic anemia around adolescence, lactic acidaemia, and mitochondrial myopathy.","definition_xrefs":["Orphanet:2598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anemia","termid":"MONDO:0000577"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0004069","MONDO:0005066","MONDO:0005570","MONDO:0005336"],"is_obsolete":false,"name":"myopathy, lactic acidosis, and sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1838103","MESH:C536101","SCTID:724138007","GARD:3885","DOID:0080099","MEDGEN:373888","OMIMPS:600462"],"synonyms":[{"name":"MLASA","type":"exact"},{"name":"MSA","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anaemia","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anemia","type":"exact"},{"name":"myopathy with lactic acidosis and sideroblastic anaemia","type":"related"},{"name":"myopathy with lactic acidosis and sideroblastic anemia","type":"related"},{"name":"myopathy, lactic acidosis and sideroblastic anaemia","type":"exact"},{"name":"myopathy, lactic acidosis and sideroblastic anemia","type":"exact"},{"name":"myopathy, lactic acidosis, and siderblastic anaemia","type":"exact"},{"name":"myopathy, lactic acidosis, and siderblastic anemia","type":"exact"},{"name":"sideroblastic anaemia and mitochondrial myopathy","type":"related"},{"name":"sideroblastic anemia and mitochondrial myopathy","type":"related"}],"termid":"MONDO:0000863","terms_by_termid":{"MONDO:0013307":null,"MONDO:0024553":null},"xrefs":{"Monarch":{"xref_id":"0000863"}}}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["UniProtKB:O74438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: SO:1000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred within a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"has_part","term_name":"duplication","termid":"SO:1000035"},{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"intrachromosomal transposition","type":"exact"}],"termid":"SO:1000041"}


id: GO:0070687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cortical actin cytoskeleton that forms part of a macropinocytic cup.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"macropinocytic cup","termid":"GO:0070685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938","GO:0015629"],"is_obsolete":false,"name":"macropinocytic cup cytoskeleton","synonyms":[{"name":"crown cytoskeleton","type":"exact"}],"termid":"GO:0070687"}


id: GO:0044837
data:
  {"annotated_genes":["SJAG_00279","SJAG_00700","SJAG_03596","SJAG_00938","SJAG_01943","SJAG_03025","SJAG_02431","SJAG_01143","SJAG_04077","SJAG_04621","SJAG_02700","SJAG_03045","SJAG_04930","SJAG_03703","SJAG_04703","SJAG_04498","SJAG_01732","SJAG_03379","SJAG_02592","SJAG_03048","SJAG_03088","SJAG_02864","SJAG_04887","SJAG_01894","SJAG_00228","SJAG_01805","SJAG_00268","SJAG_04982","SJAG_01665","SJAG_00082","SJAG_02795","SJAG_02831","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105160],"is_not":false,"summary":null,"term":"GO:0044837"},{"annotations":[110813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[108146,89282,98282,98020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[102425,74754,98897,92508,97638,111885,119583,92558,95259,75462,97912,102568,118492,97713,117908,76376,88213,112320,72410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[112321,98023,97639,102426,95260,98898,100702,100933,117909,88214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98271],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102370],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[89955,94381],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[119382,93779],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of an actomyosin contractile ring.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"cytokinesis, actomyosin contractile ring organization","type":"exact"}],"termid":"GO:0044837","terms_by_termid":{"GO:0000915":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: MONDO:0019699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete slender bone dysplasia (obsolete MONDO:0019699)","secondary_identifiers":["Orphanet:93440","icd11.foundation:691657602"],"termid":"MONDO:0019699","xrefs":{"Monarch":{"xref_id":"0019699"}}}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: MONDO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition referring to irritation or compression of the proximal sciatic nerve, secondary to contraction of the piriformis muscle. It results in pain in the hip or the back of the leg mimicking disk-related sciatica.","definition_xrefs":["NCIT:C85012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nerve compression syndrome","termid":"MONDO:0003615"},{"relation_name":"is_a","term_name":"sciatica","termid":"MONDO:0024333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"piriformis syndrome","secondary_identifiers":["MEDGEN:141601","MESH:D055958","SCTID:129179000","UMLS:C0458224","GARD:10026"],"synonyms":[{"name":"Pseudosciatica","type":"related"},{"name":"deep gluteal syndrome","type":"related"},{"name":"hip socket neuropathy","type":"related"},{"name":"muscle syndrome, piriformis","type":"related"},{"name":"muscle syndromes, piriformis","type":"related"},{"name":"pelvic outlet syndrome","type":"related"},{"name":"piriformis muscle syndrome","type":"exact"},{"name":"piriformis muscle syndromes","type":"related"},{"name":"piriformis syndrome","type":"exact"},{"name":"piriformis syndromes","type":"related"},{"name":"pyriformis syndrome","type":"related"},{"name":"syndrome, piriformis","type":"related"},{"name":"syndrome, piriformis muscle","type":"related"},{"name":"syndromes, piriformis","type":"related"},{"name":"syndromes, piriformis muscle","type":"related"},{"name":"wallet sciatica","type":"related"}],"termid":"MONDO:0043320","xrefs":{"Monarch":{"xref_id":"0043320"}}}


id: MONDO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes (obsolete MONDO:0017459)","secondary_identifiers":["SCTID:253967005","Orphanet:295010"],"synonyms":[{"name":"central polydactyly of foot","type":"exact"},{"name":"mesoaxial polydactyly of toes","type":"exact"},{"name":"mirror foot","type":"exact"}],"termid":"MONDO:0017459","xrefs":{"Monarch":{"xref_id":"0017459"}}}


id: GO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A body present in the cytoplasm of some dinoflagellates, which is the source of bioluminescence; emits light on acidification in the presence of oxygen.","definition_xrefs":["GOC:pr","GOC:mag","PMID:4501583","PMID:5642469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"scintillon","termid":"GO:0036007"}


id: PBO:0064377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component","termid":"PBO:0064377"}


id: GO:0018787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + H2O = 4-hydroxybenzoyl-CoA + chloride + H+.","definition_xrefs":["RHEA:14853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"4-chlorobenzoyl-CoA dehalogenase activity","secondary_identifiers":["MetaCyc:3.8.1.7-RXN","UM-BBD_enzymeID:r0140","EC:3.8.1.7"],"synonyms":[{"name":"4-chlorobenzoyl CoA chlorohydrolase activity","type":"related"}],"termid":"GO:0018787"}


id: PBO:0086422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase with a role in biogenesis of RNA pol II and polIII; may be involved in assembly of RNA polymerases II and III and in their transport into the nucleus; may have a role in sister chromatid cohesion; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; contains a Gly-Pro-Asn motif in the G domain; similar to Npa3p and Gpn2p","termid":"PBO:0086422"}


id: GO:0042332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to gravity.","definition_xrefs":["GOC:jl","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gravitaxis","secondary_identifiers":["GO:0048062"],"synonyms":[{"name":"geotactic behavior","type":"exact"},{"name":"geotactic behaviour","type":"exact"},{"name":"geotaxis","type":"exact"},{"name":"gravitactic behavior","type":"exact"},{"name":"gravitactic behaviour","type":"exact"},{"name":"taxis in response to gravitational stimulus","type":"exact"},{"name":"taxis in response to gravity","type":"exact"}],"termid":"GO:0042332"}


id: GO:0102758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + NADP+ = a very-long-chain (2E)-enoyl-CoA + H+ + NADPH. This reaction is the fourth (reduction) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:16564093","PMID:19763486","RHEA:14473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"very-long-chain enoyl-CoA reductase activity","secondary_identifiers":["EC:1.3.1.93","MetaCyc:RXN-7711"],"termid":"GO:0102758"}


id: PATO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001010 relative intensity (obsolete PATO:0001010)","termid":"PATO:0001010"}


id: GO:1902831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:TermGenie","PMID:21730158","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"positively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spinal cord association neuron differentiation","synonyms":[{"name":"activation of spinal cord association neuron differentiation","type":"narrow"},{"name":"activation of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"positive regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"upregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"upregulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902831"}


id: MONDO:1012383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trapped neutrophil syndrome, non-human animal","termid":"MONDO:1011700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapped neutrophil syndrome, dog","secondary_identifiers":["OMIA:001428-9615"],"termid":"MONDO:1012383","xrefs":{"Monarch":{"xref_id":"1012383"}}}


id: PBO:0090982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit Sds22","termid":"PBO:0090982"}


id: GO:1905127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GO_REF:0000058","PMID:20694152","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of axo-dendritic protein transport","termid":"GO:1905126"},{"relation_name":"negatively_regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of axo-dendritic protein transport","synonyms":[{"name":"down regulation of axo-dendritic protein transport","type":"exact"},{"name":"down regulation of axonal protein transport","type":"narrow"},{"name":"down-regulation of axo-dendritic protein transport","type":"exact"},{"name":"down-regulation of axonal protein transport","type":"narrow"},{"name":"downregulation of axo-dendritic protein transport","type":"exact"},{"name":"downregulation of axonal protein transport","type":"narrow"},{"name":"inhibition of axo-dendritic protein transport","type":"narrow"},{"name":"inhibition of axonal protein transport","type":"narrow"},{"name":"negative regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905127"}


id: MONDO:0008910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the CPN1 gene, encoding carboxypeptidase N catalytic chain. It may be characterized by episodic angioedema, chronic urticaria, asthma and/or allergic hypersensitivity.","definition_xrefs":["NCIT:C132196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N deficiency","secondary_identifiers":["OMIM:212070","UMLS:C0398782","DOID:0111583","ICD9:279.8","MEDGEN:98312","MESH:C562876","SCTID:234627009"],"synonyms":[{"name":"carboxypeptidase N deficiency","type":"exact"}],"termid":"MONDO:0008910","xrefs":{"Monarch":{"xref_id":"0008910"}}}


id: MONDO:0956979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by significant decline in pulmonary function and increase of airway inflammation at night. During sleep, recumbent posture causes a reduction in the lung volumes, respiratory muscle tone, and lung compliance. The overnight physiological abnormalities include: increased airway inflammation and decreased steroid responsiveness, increased pulmonary capillary blood volume, functional differences in blood/air volume ratios and mechanical coupling of the parenchyma to the airways.","definition_xrefs":["DOID:0080826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal asthma","termid":"MONDO:0956979","xrefs":{"Monarch":{"xref_id":"0956979"}}}


id: MONDO:0010105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pineal region teratoma","termid":"MONDO:0004015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma, pineal","secondary_identifiers":["MEDGEN:336449","MESH:C537401","OMIM:273120","UMLS:C1848902"],"synonyms":[{"name":"teratoma, pineal","type":"exact"}],"termid":"MONDO:0010105","xrefs":{"Monarch":{"xref_id":"0010105"}}}


id: MONDO:0018924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare X-linked inherited form of syndromic microphthalmia characterized by unilateral or bilateral microphthalmia (and/or clinical anophthalmia) with or without coloboma in addition to a range of extraocular manifestations such as microcephaly, malformed ears, dental abnormalities (i.e. irregular shape of incisors), skeletal anomalies (duplicated thumbs, syndactyly, clinodactyly, camptodactyly), urogenital anomalies (hypospadias, cryptorchidism, renal dysgenesis, hydroureter) and mild to severe intellectual disability. It is allelic to two disorders: oculofaciocardiodental syndrome and premature aging appearance-developmental delay-cardiac arrhythmia syndrome.","definition_xrefs":["Orphanet:568"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"excluded_subClassOf","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, Lenz type","secondary_identifiers":["NORD:1359","icd11.foundation:678242327","GARD:87"],"synonyms":[{"name":"Lenz Microphthalmia Syndrome","type":"exact"},{"name":"Lenz dysplasia","type":"related"},{"name":"Lenz microphthalmia","type":"exact"},{"name":"Lenz microphthamia syndrome","type":"exact"},{"name":"MAA (formerly)","type":"related"},{"name":"MCOPS1","type":"related"},{"name":"microphthalmia Lenz type","type":"related"},{"name":"microphthalmia or anophthalmos with associated anomalies (formerly)","type":"related"},{"name":"microphthalmia syndromic 1","type":"related"},{"name":"syndromic microphthalmia type 1","type":"related"}],"termid":"MONDO:0018924","xrefs":{"Monarch":{"xref_id":"0018924"}}}


id: PATO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of how long the bearer has existed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"time","termid":"PATO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age","termid":"PATO:0000011"}


id: PBO:0028156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_doxorubicin_level","termid":"PBO:0028156"}


id: GO:0098029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short structure attached to an icosahedral virion capsid, and used for attachment to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, spike","termid":"GO:0098029"}


id: MONDO:0009942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyknoachondrogenesis is a lethal skeletal osteochondrodysplasia characterized by severe generalized osteosclerosis.","definition_xrefs":["Orphanet:3003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pyknoachondrogenesis","secondary_identifiers":["SCTID:719258003","UMLS:C1849523","icd11.foundation:588435239","GARD:4610","MESH:C536251","MEDGEN:337844","OMIM:265880"],"synonyms":[{"name":"association of skeletal defects resembling achondrogenesis with generalised bone sclerosis","type":"related"},{"name":"association of skeletal defects resembling achondrogenesis with generalized bone sclerosis","type":"related"},{"name":"camera syndrome","type":"exact"},{"name":"pyknoachondrogenesis","type":"exact"}],"termid":"MONDO:0009942","xrefs":{"Monarch":{"xref_id":"0009942"}}}


id: PBO:0066182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 6","termid":"PBO:0066182"}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: PBO:0045395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 2","termid":"PBO:0045395"}


id: MONDO:0032917
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86672],"is_not":false,"summary":null,"term":"MONDO:0032917"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1710038","OMIM:618787","UMLS:C5394080","GARD:18154","DOID:0112167"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 76","type":"narrow"},{"name":"DFNA76","type":"narrow"},{"name":"deafness, autosomal dominant 76","type":"narrow"}],"termid":"MONDO:0032917","terms_by_termid":{"MONDO:0032917":null},"xrefs":{"Monarch":{"xref_id":"0032917"}}}


id: SO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA located in the genome and able to be transmitted to the offspring.","definition_xrefs":["BCS:etrwz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA","synonyms":[{"name":"gDNA","type":"exact"},{"name":"genomic DNA","type":"exact"}],"termid":"SO:0000991"}


id: PBO:0083790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in the TOR signaling pathway; physically associates with the protein phosphatase 2A and the SIT4 protein phosphatase catalytic subunits","termid":"PBO:0083790"}


id: GO:1990606
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99964,102772],"is_not":false,"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"Generation of a 'twisting' activity resulting in the scission of a membrane, driven by GTP hydrolysis.","definition_xrefs":["PMID:11242086","PMID:23530241","PMID:24515348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase motor activity","termid":"GO:0061791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003924"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0003774","GO:0003924"],"is_obsolete":false,"name":"membrane scission GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990606","terms_by_termid":{"GO:1990606":null}}


id: PBO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 22","termid":"PBO:0072052"}


id: MONDO:0006958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete SAPHO syndrome (obsolete MONDO:0006958)","termid":"MONDO:0006958","xrefs":{"Monarch":{"xref_id":"0006958"}}}


id: GO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sucrose","termid":"GO:0009744"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose stimulus","termid":"GO:0071329"}


id: PBO:0086301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ubiquinone (Coenzyme Q) biosynthesis; possibly functioning in stabilization of Coq7p; located on matrix face of mitochondrial inner membrane; component of a mitochondrial ubiquinone-synthesizing complex; human homolog COQ4 can complement yeast coq4 null mutant","termid":"PBO:0086301"}


id: PBO:0083591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0010","termid":"PBO:0083591"}


id: PBO:0079957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP7 antisense RNA 1","termid":"PBO:0079957"}


id: GO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"}


id: PBO:0057268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 493","termid":"PBO:0057268"}


id: GO:0006499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein myristoylation","termid":"GO:0018377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein myristoylation","termid":"GO:0006499"}


id: PR:000027526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/UnMod","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: DNA replication regulator sld2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-SLD2/UnMod","type":"exact"},{"name":"drc1/UnMod","type":"exact"}],"termid":"PR:000027526"}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:24727426","PMID:9922375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["GO:0005224","MetaCyc:3.6.3.49-RXN","TC:3.A.1.202.1","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator","EC:5.6.1.6"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: PBO:0078927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-3","termid":"PBO:0078927"}


id: GO:0031232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"external side of plasma membrane","termid":"GO:0009897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0009986"],"is_obsolete":false,"name":"extrinsic component of external side of plasma membrane","synonyms":[{"name":"extrinsic to external leaflet of plasma membrane","type":"exact"},{"name":"extrinsic to external side of plasma membrane","type":"narrow"}],"termid":"GO:0031232"}


id: GO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-A subunits (sometimes known as activin beta-A or activin/inhibin beta-A).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"activin A complex","secondary_identifiers":["GO:0048181"],"termid":"GO:0043509"}


id: PBO:0076296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope protein 1","termid":"PBO:0076296"}


id: GO:0070017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to thrombospondin.","definition_xrefs":["PMID:2478219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-thrombospondin complex","synonyms":[{"name":"ITGAV-ITGB3-THBS1 complex","type":"narrow"}],"termid":"GO:0070017"}


id: PBO:0077314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 1","termid":"PBO:0077314"}


id: MONDO:0020611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--kell system (obsolete MONDO:0020611)","secondary_identifiers":["OMIM:110900"],"synonyms":[{"name":"BLOOD GROUP--KELL SYSTEM","type":"related"},{"name":"Blood Group--Kell-Cellano System","type":"related"},{"name":"K(0)","type":"related"},{"name":"KEL","type":"related"},{"name":"Kell-Null","type":"related"},{"name":"Ko","type":"related"},{"name":"blood group, Kell","type":"exact"}],"termid":"MONDO:0020611","xrefs":{"Monarch":{"xref_id":"0020611"}}}


id: MONDO:0017961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of gonadal development (obsolete MONDO:0017961)","secondary_identifiers":["Orphanet:325055"],"termid":"MONDO:0017961","xrefs":{"Monarch":{"xref_id":"0017961"}}}


id: PBO:0043901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 1","termid":"PBO:0043901"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: GO:0098557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the smooth endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum membrane","termid":"GO:0030868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of smooth endoplasmic reticulum membrane","termid":"GO:0098557"}


id: PBO:0077229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 5","termid":"PBO:0077229"}


id: MONDO:0020090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to gonadal dysgenesis (obsolete MONDO:0020090)","secondary_identifiers":["Orphanet:98313"],"synonyms":[{"name":"Male infertility due to testicular dysgenesis","type":"exact"}],"termid":"MONDO:0020090","xrefs":{"Monarch":{"xref_id":"0020090"}}}


id: MONDO:0011040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, Anhalt type","secondary_identifiers":["MESH:C563348","UMLS:C1832464","OMIM:601344","MEDGEN:318632"],"synonyms":[{"name":"spinal dysplasia, Anhalt type","type":"exact"}],"termid":"MONDO:0011040","xrefs":{"Monarch":{"xref_id":"0011040"}}}


id: MONDO:0002289
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A disease involving the iris.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"iris disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0022078","SCTID:85478004","NCIT:C34737","DOID:240","MEDGEN:9556","MESH:D007499"],"synonyms":[{"name":"disease of iris","type":"exact"},{"name":"disease or disorder of iris","type":"exact"},{"name":"disorder of iris","type":"exact"},{"name":"iris disease","type":"exact"},{"name":"iris disease or disorder","type":"exact"},{"name":"iris disorder","type":"exact"}],"termid":"MONDO:0002289","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002289"}}}


id: FYPO:0002560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"abnormal protein localization to actomyosin contractile ring","synonyms":[{"name":"abnormal protein localisation to actomyosin contractile ring","type":"exact"},{"name":"abnormal protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal protein localization to contractile ring","type":"exact"},{"name":"abnormal protein localization to cytokinetic contractile ring","type":"exact"},{"name":"abnormal protein localization to mitotic contractile ring","type":"exact"},{"name":"abnormal protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0002560"}


id: GO:0006603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphocreatine, a phosphagen of creatine present in high concentration in striated muscle which is synthesized and broken down by creatine phosphokinase to buffer ATP concentration. It acts as an immediate energy reserve for muscle.","definition_xrefs":["PMID:16371597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphagen metabolic process","termid":"GO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine metabolic process","synonyms":[{"name":"phosphocreatine metabolism","type":"exact"}],"termid":"GO:0006603"}


id: GO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen bound to a cell surface receptor.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}


id: PBO:0087728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Set3 complex; complex is a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; potential Cdc28p substrate","termid":"PBO:0087728"}


id: PBO:0051016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2BP2 antisense RNA 1","termid":"PBO:0051016"}


id: GO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, soma encoded","type":"exact"},{"name":"maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded","type":"broad"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, soma encoded","type":"exact"}],"termid":"GO:0008071"}


id: PBO:0051299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-35 (pseudogene)","termid":"PBO:0051299"}


id: PBO:0082445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc","termid":"PBO:0082445"}


id: PBO:0064667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 2","termid":"PBO:0064667"}


id: PBO:0063167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXBP1 antisense RNA 1","termid":"PBO:0063167"}


id: PBO:0029893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phleomycin","termid":"PBO:0029893"}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: MONDO:0019155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in males that affects sexual development. It is characterized by underdevelopment of the Leydig cells, which are cells in the testes that secrete male sex hormones (androgens) and are important for male sexual development. Individuals with LCH have a typical male genetic make-up (46, XY), but due to lowered levels of androgens, may have a range of genital (reproductive organ) differences. Individuals with LCH may have a small penis (micropenis),the opening of the urethra may be located on the underside of the penis (hypospadias), or the scrotum may be divided into two halves (bifid scrotum). Given these differences in development, the external genitalia may not appear clearly male or female (ambiguous genitalia). Some individuals with LCH can have female external genitalia and small testes that have not descended and are located in the pelvis, abdomen, or groin. This may be referred to as type 1, whereas less severe cases might be called type 2. LCH is inherited in an autosomal recessive manner and is caused by mutations in the LHCGR gene.Although there is no specific treatment or cure for LCH, there may be ways to manage the symptoms. A team of doctors or specialists is often needed to figure out the treatment options for each person.","definition_xrefs":["GARD:0003244"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male infertility","termid":"MONDO:0005372"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell hypoplasia","secondary_identifiers":["MedDRA:10024406","MEDGEN:449533","Orphanet:755","GARD:3244","icd11.foundation:472787488","UMLS:C0860158","DOID:0112259","MESH:C562567"],"synonyms":[{"name":"46,XY DSD due to LH resistance or LHB deficiency","type":"exact"},{"name":"46,XY DSD due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to LH defects","type":"related"},{"name":"46,XY disorder of sex development due to LH resistance or LHB deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"},{"name":"LH resistance due to LH receptor deactivation","type":"related"},{"name":"Leydig cell agenesis","type":"related"},{"name":"Male hypergonadotropic hypogonadism due to LHCGR defect","type":"related"},{"name":"Male pseudohermaphroditism due to LH resistance or LHB deficiency","type":"exact"},{"name":"Male pseudohermaphroditism due to luteinizing hormone resistance or luteinizing hormone beta subunit deficiency","type":"exact"}],"termid":"MONDO:0019155","xrefs":{"Monarch":{"xref_id":"0019155"}}}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: PBO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type V","termid":"PBO:0004295"}


id: GO:0016677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor","secondary_identifiers":["EC:1.9.6.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, nitrogenous group as acceptor","type":"exact"}],"termid":"GO:0016677"}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: PBO:0076967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like X-linked","termid":"PBO:0076967"}


id: MONDO:0019588
data:
  {"annotated_genes":["SJAG_04409","SJAG_01538","SJAG_03007","SJAG_03536","SJAG_04856","SJAG_00082","SJAG_00164","SJAG_04554","SJAG_04558","SJAG_00244","SJAG_01941","SJAG_01400","SJAG_02463","SJAG_00365","SJAG_00488","SJAG_02155"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[86582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[85286,85285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[86721,86720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[86986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[85774,85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[86689,86688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[85346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[86218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[87106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[87109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[87086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"}]},"cv_name":"mondo","definition":"Autosomal recessive form of nonsyndromic deafness.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00164":null,"SJAG_00244":null,"SJAG_00365":null,"SJAG_00488":null,"SJAG_01400":null,"SJAG_01538":null,"SJAG_01941":null,"SJAG_02155":null,"SJAG_02463":null,"SJAG_03007":null,"SJAG_03536":null,"SJAG_04409":null,"SJAG_04554":null,"SJAG_04558":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18117","Orphanet:90636","DOID:0050565","UMLS:C1846647","OMIM:607197","OMIMPS:220290","MEDGEN:337623","MESH:C564609"],"synonyms":[{"name":"autosomal recessive isolated neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive isolated sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive nonsyndromic genetic deafness","type":"narrow"},{"name":"deafness, autosomal recessive","type":"narrow"},{"name":"deafness, neurosensory nonsyndromic recessive, DFN","type":"narrow"},{"name":"hearing loss, autosomal recessive","type":"exact"},{"name":"nonsyndromic deafness, autosomal recessive","type":"narrow"},{"name":"nonsyndromic genetic deafness, autosomal recessive","type":"narrow"}],"termid":"MONDO:0019588","terms_by_termid":{"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0012091":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0033199":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0019588"}}}


id: MONDO:0021312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the adrenal cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of adrenal cortex","secondary_identifiers":["SCTID:371964008","UMLS:C0346402","MEDGEN:83425","NCIT:C9327"],"synonyms":[{"name":"adrenal cortex cancer","type":"exact"},{"name":"cancer of adrenal cortex","type":"exact"},{"name":"malignant adrenal cortex neoplasm","type":"exact"},{"name":"malignant adrenal cortex tumor","type":"exact"},{"name":"malignant adrenal cortex tumour","type":"exact"},{"name":"malignant adrenocortical neoplasm","type":"exact"},{"name":"malignant adrenocortical tumor","type":"exact"},{"name":"malignant adrenocortical tumour","type":"exact"},{"name":"malignant neoplasm of adrenal cortex","type":"exact"},{"name":"malignant neoplasm of the adrenal cortex","type":"exact"},{"name":"malignant tumor of the adrenal cortex","type":"exact"},{"name":"malignant tumour of the adrenal cortex","type":"exact"}],"termid":"MONDO:0021312","xrefs":{"Monarch":{"xref_id":"0021312"}}}


id: MONDO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia sibirica, which is transmitted by ticks (Dermacentor nuttalli, Dermacentor marginatus and Haemaphysalis concinna). The infection has symptom fever, has symptom eschar, has symptom regional adenopathy, and has symptom maculopapular rash.","definition_xrefs":["DOID:10921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siberian tick typhus","secondary_identifiers":["MEDGEN:639822","ICD9:082.2","SCTID:186781003","UMLS:C0549160"],"synonyms":[{"name":"Manchurian typhus","type":"exact"},{"name":"North Asian tick fever","type":"exact"},{"name":"North Asian tick fever (disorder) [ambiguous]","type":"exact"},{"name":"North Asian tick typhus","type":"exact"},{"name":"Rickettsia sibirica spotted fever","type":"exact"}],"termid":"MONDO:0001154","xrefs":{"Monarch":{"xref_id":"0001154"}}}


id: MONDO:0016631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which develops after birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to an acquired platelet anomaly (obsolete MONDO:0016631)","secondary_identifiers":["Orphanet:248347"],"synonyms":[{"name":"rare bleeding disorder due to an acquired platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to an acquired platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0016631","xrefs":{"Monarch":{"xref_id":"0016631"}}}


id: GO:1901407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901407)","synonyms":[{"name":"regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901407"}


id: GO:0032418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a lysosome is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lysosome localization","synonyms":[{"name":"lysosome localisation","type":"exact"}],"termid":"GO:0032418"}


id: GO:0000701
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73585],"is_not":false,"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"purine-specific mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.2.2.31"],"synonyms":[{"name":"A/G-specific adenine DNA glycosylase activity","type":"narrow"}],"termid":"GO:0000701","terms_by_termid":{"GO:0000701":null}}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["PMID:2387238","GOC:PARL","GOC:bf","GOC:mat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


id: GO:0033919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal (1->3)-alpha-D-glucosidic links in 1,3-alpha-D-glucans.","definition_xrefs":["EC:3.2.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glucan 1,3-alpha-glucosidase activity","secondary_identifiers":["Reactome:R-HSA-9694364","Reactome:R-HSA-532667","Reactome:R-HSA-9683663","MetaCyc:3.2.1.84-RXN","Reactome:R-HSA-548890"],"synonyms":[{"name":"1,3-alpha-D-glucan 3-glucohydrolase activity","type":"related"},{"name":"exo-1,3-alpha-glucanase activity","type":"related"}],"termid":"GO:0033919"}


id: SO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript with a translational frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_frameshifted","termid":"SO:0000887"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_with_translational_frameshift","synonyms":[{"name":"transcript with translational frameshift","type":"exact"}],"termid":"SO:0000118"}


id: MONDO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia, familial, 1","termid":"MONDO:0009734"},{"relation_name":"is_a","term_name":"diazoxide-resistant focal hyperinsulinism","termid":"MONDO:0019265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"diazoxide-resistant focal hyperinsulinism due to SUR1 deficiency","secondary_identifiers":["MEDGEN:1683284","Orphanet:276598","GARD:17285","UMLS:C5191059"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to SUR1 deficiency, diazoxide-resistant focal form","type":"exact"}],"termid":"MONDO:0017187","xrefs":{"Monarch":{"xref_id":"0017187"}}}


id: MONDO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis C infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic hepatitis C virus infection","secondary_identifiers":["ICD9:070.44","MESH:D019698","EFO:0004220"],"synonyms":[{"name":"chronic Hepatitis C","type":"exact"},{"name":"hepatitis C infection, chronic","type":"exact"},{"name":"hepatitis C, chronic","type":"exact"}],"termid":"MONDO:0005354","xrefs":{"Monarch":{"xref_id":"0005354"}}}


id: GO:0033330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of O-glucosylated derivatives of kaempferol.","definition_xrefs":["MetaCyc:PWY-5320","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kaempferol O-glucoside metabolic process","termid":"GO:0033329"},{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside biosynthetic process","synonyms":[{"name":"kaempferol O-glucoside anabolism","type":"exact"},{"name":"kaempferol O-glucoside biosynthesis","type":"exact"},{"name":"kaempferol O-glucoside formation","type":"exact"},{"name":"kaempferol O-glucoside synthesit","type":"exact"}],"termid":"GO:0033330"}


id: MONDO:0023000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dobrow syndrome (obsolete MONDO:0023000)","termid":"MONDO:0023000","xrefs":{"Monarch":{"xref_id":"0023000"}}}


id: PBO:0076211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 21","termid":"PBO:0076211"}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: MONDO:0012240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the TPM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"},{"relation_name":"is_a","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 23","secondary_identifiers":["MEDGEN:324513","DOID:0110932","GARD:15454","NCIT:C164225","OMIM:609285","MESH:C538351","UMLS:C1836447"],"synonyms":[{"name":"CAPM2","type":"exact"},{"name":"NEM4","type":"exact"},{"name":"TPM2 nemaline myopathy","type":"exact"},{"name":"cap myopathy 2","type":"exact"},{"name":"nemaline myopathy 4","type":"exact"},{"name":"nemaline myopathy 4, autosomal dominant","type":"exact"},{"name":"nemaline myopathy caused by mutation in TPM2","type":"exact"},{"name":"nemaline myopathy type 4","type":"exact"}],"termid":"MONDO:0012240","xrefs":{"Monarch":{"xref_id":"0012240"}}}


id: GO:0009184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009184"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: FYPO:0004991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiotic cell cycle","synonyms":[{"name":"decreased protein accumulation during meiotic cell cycle","type":"related"},{"name":"reduced protein level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004991"}


id: PBO:0081704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 625","termid":"PBO:0081704"}


id: CHEBI:34656
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cumene","termid":"CHEBI:34656"}


id: PBO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2","termid":"PBO:0048789"}


id: GO:1902634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["PMID:22562153","GOC:di","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol catabolic process","termid":"GO:0031161"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","termid":"GO:1902633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902634"}


id: GO:1990898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis. Proteins involved in this process include the MRX/MRN complex and Sae2/Ctp1/RBBP8(CtIP).","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break clipping (obsolete GO:1990898)","termid":"GO:1990898"}


id: MONDO:0004790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reversible condition wherein large vacuoles of triglyceride fat accumulate in liver cells via the process of steatosis.","definition_xrefs":["Wikipedia:Fatty_liver"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fatty liver disease","secondary_identifiers":["DOID:9452","MEDGEN:398225","ICD9:571.0","SCTID:371330000","SCTID:197321007","MESH:D005234","UMLS:C2711227","ICD9:571.8"],"synonyms":[{"name":"fatty change of liver","type":"exact"},{"name":"fatty liver","type":"exact"},{"name":"hepatic lipidosis","type":"exact"},{"name":"steatosis of liver","type":"exact"}],"termid":"MONDO:0004790","xrefs":{"Monarch":{"xref_id":"0004790"}}}


id: PBO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1 (predicted)","termid":"PBO:0018125"}


id: GO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acetate","termid":"GO:0010034"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetate","termid":"GO:0071311"}


id: PBO:0050210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 27","termid":"PBO:0050210"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: GO:0021870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal-Retzius cell differentiation","termid":"GO:0021870"}


id: GO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"}


id: SO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"has_quality","term_name":"consensus","termid":"SO:0000993"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_mRNA","synonyms":[{"name":"consensus mRNA","type":"exact"}],"termid":"SO:0000995"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: MONDO:0017638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Manganese poisoning is associated with chronic inhalation of manganese particles by individuals who work with manganese ore. Clinical features include confusion; hallucinations; and an extrapyramidal syndrome (parkinson disease, secondary) that includes rigidity; dystonia; retropulsion; and tremor. (Adams, Principles of Neurology, 6th ed, p1213)","definition_xrefs":["MESH:D020149"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare parkinsonian syndrome due to intoxication (obsolete MONDO:0017637)","termid":"MONDO:0017637"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese poisoning","secondary_identifiers":["GARD:21264","SCTID:88687001","EFO:1001808","ICD9:503","MedDRA:10058951","Orphanet:306682"],"synonyms":[{"name":"Manganism","type":"exact"},{"name":"manganese intoxication","type":"exact"}],"termid":"MONDO:0017638","xrefs":{"Monarch":{"xref_id":"0017638"}}}


id: MONDO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of paroxysmal choreoathetosis and progressive spastic paraplegia, episodes are often precipitated by alcohol, fatigue, or emotional stress that has material basis in heterozygous mutation in the SLC2A1 gene on chromosome 1p34.","definition_xrefs":["DOID:0090044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441","MONDO:0037792"],"is_obsolete":false,"name":"dystonia 9","secondary_identifiers":["Orphanet:53583","MEDGEN:371427","MESH:C563401","SCTID:715564000","GARD:16656","OMIM:601042","NANDO:1200520","UMLS:C1832855"],"synonyms":[{"name":"Cse choreoathetosis, paroxysmal, with episodic ataxia","type":"related"},{"name":"DYT9","type":"exact"},{"name":"choreoathetosis, kinesigenic, with episodic ataxia and spasticity","type":"related"},{"name":"choreoathetosis/spasticity, episodic","type":"related"},{"name":"dystonia 9","type":"exact"},{"name":"dystonia type 9","type":"exact"},{"name":"episodic choreoathetosis/spasticity","type":"exact"},{"name":"paroxysmal dystonic choreathetosis with episodic ataxia and spasticity","type":"related"}],"termid":"MONDO:0010983","xrefs":{"Monarch":{"xref_id":"0010983"}}}


id: PBO:0062342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 1 pseudogene","termid":"PBO:0062342"}


id: GO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye morphogenesis","secondary_identifiers":["GO:0048594","GO:0048595"],"synonyms":[{"name":"camera-style eye morphogenesis","type":"exact"}],"termid":"GO:0048593"}


id: PBO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marginal zone B and B1 cell specific protein","termid":"PBO:0060387"}


id: GO:1902652
data:
  {"annotated_genes":["SJAG_04018","SJAG_03018","SJAG_03531","SJAG_00717","SJAG_02719","SJAG_00770","SJAG_02044","SJAG_02068","SJAG_01307","SJAG_00158","SJAG_03750","SJAG_04270","SJAG_03024","SJAG_00453","SJAG_04499","SJAG_02855","SJAG_04790","SJAG_04362","SJAG_00624","SJAG_00413","SJAG_00370","SJAG_03509","SJAG_04059","SJAG_02104","SJAG_04810","SJAG_03598","SJAG_03249","SJAG_01474","SJAG_04049","SJAG_04217","SJAG_03235","SJAG_03929","SJAG_03715","SJAG_02982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116569,109259,89614,65699,73872,77073,80206,80341,110100,69706,73027,88428,107544,76154,76251,80122,115257,107858,71619,76075,74154,71442,94605,70685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[103999,80170,76171,103358,115098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[73748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"},{"annotations":[93851],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109865],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[75498],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[88518,105856],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving secondary alcohol.","definition_xrefs":["PMID:11288200","GOC:TermGenie","GO_REF:0000068","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04362":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"secondary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol metabolism","type":"exact"}],"termid":"GO:1902652","terms_by_termid":{"GO:0006102":null,"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PR:O59698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol-3-phosphate transporter GlpT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.01c","secondary_identifiers":["UniProtKB:O59698"],"synonyms":[{"name":"Spom972h-glpT","type":"exact"}],"termid":"PR:O59698"}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: PBO:0083568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF GLE2/YER107C","termid":"PBO:0083568"}


id: PBO:0053249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 3","termid":"PBO:0053249"}


id: PBO:0028381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_DNA_N-glycosylase_activity","termid":"PBO:0028381"}


id: MONDO:0011324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypospadias, hypertelorism, upper 51D coloboma, and mixed-type hearing loss (obsolete MONDO:0011324)","termid":"MONDO:0011324","xrefs":{"Monarch":{"xref_id":"0011324"}}}


id: MONDO:0957114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic potassium channel defect","secondary_identifiers":["GARD:19566","UMLS:C5681685","MEDGEN:1842582","Orphanet:98741"],"termid":"MONDO:0957114","xrefs":{"Monarch":{"xref_id":"0957114"}}}


id: PBO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNA4 pseudogene 1","termid":"PBO:0052597"}


id: MONDO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic intellectual disability characterized by early developmental delay with failure to thrive, intellectual disability, congenital hepatic fibrosis, renal cystic dysplasia, and dysmorphic facial features (bilateral ptosis, anteverted nostrils, high arched palate, and micrognathia). Variable additional features have been reported, including cerebellar anomalies, postaxial polydactyly, syndactyly, genital anomalies, tachypnea. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2031"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary parenchymatous liver disease (obsolete MONDO:0015508)","termid":"MONDO:0015508"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic fibrosis-renal cysts-intellectual disability syndrome","secondary_identifiers":["MESH:C565867","UMLS:C1859300","GARD:5177","OMIM:213010","MEDGEN:347120"],"synonyms":[{"name":"Thompson Baraitser syndrome","type":"exact"},{"name":"Thompson-Baraitser syndrome","type":"exact"},{"name":"cerebellar vermis aplasia with associated features suggesting SMITH-Lemli-Opitz syndrome and Meckel syndrome","type":"related"}],"termid":"MONDO:0008941","xrefs":{"Monarch":{"xref_id":"0008941"}}}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: PBO:0071134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 136","termid":"PBO:0071134"}


id: MONDO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"5 ug/dL) is reported to lead to irreversible effects such as loss of cognition, shortening of attention span, alteration of behavior, dyslexia, attention deficit disorder, hypertension, renal impairment, immunotoxicity and toxicity to the reproductive organs.","definition_xrefs":["Orphanet:330015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lead poisoning","secondary_identifiers":["ICD9:984.9","ICD9:984.8","SCTID:38342005","GARD:21503","MESH:D007855"],"synonyms":[{"name":"Lead intoxication","type":"exact"},{"name":"plumbism","type":"exact"},{"name":"saturnism","type":"exact"}],"termid":"MONDO:0018019","xrefs":{"Monarch":{"xref_id":"0018019"}}}


id: PBO:0116773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1 (gene/pseudogene)","termid":"PBO:0116773"}


id: GO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between peptides. Peptides are compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide stabilization activity (obsolete GO:0048191)","synonyms":[{"name":"peptide stabilization activity","type":"exact"}],"termid":"GO:0048191"}


id: GO:1900176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["PMID:15084459","GOC:BHF","GOC:TermGenie","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900176)","synonyms":[{"name":"down-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900176"}


id: GO:1903759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction that is involved in regulation of aerobic respiration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:19266076"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in regulation of aerobic respiration (obsolete GO:1903759)","synonyms":[{"name":"signaling cascade involved in regulation of aerobic respiration","type":"narrow"},{"name":"signaling pathway involved in regulation of aerobic respiration","type":"related"},{"name":"signalling cascade involved in regulation of aerobic respiration","type":"narrow"},{"name":"signalling pathway involved in regulation of aerobic respiration","type":"related"}],"termid":"GO:1903759"}


id: GO:0102838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102838)","termid":"GO:0102838"}


id: GO:0090663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the peptide neurotransmitter galanin binding to a cell surface receptor.","definition_xrefs":["PMID:25691535","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide signaling pathway","termid":"GO:0007218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"galanin-activated signaling pathway","synonyms":[{"name":"galanin signaling pathway","type":"related"},{"name":"galanin signalling pathway","type":"related"},{"name":"galanin-activated signalling pathway","type":"exact"}],"termid":"GO:0090663"}


id: PBO:0056322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 2","termid":"PBO:0056322"}


id: GO:0071529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited into the initial acellular cementum.","definition_xrefs":["GOC:sl","PMID:17043865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cementum mineralization","synonyms":[{"name":"cementum formation","type":"related"}],"termid":"GO:0071529"}


id: PBO:0040502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase B pseudogene 1","termid":"PBO:0040502"}


id: MONDO:0018499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with atrioventricular septal defect, pulmonary stenosis, heterotaxy","secondary_identifiers":["Orphanet:423712","GARD:21756","UMLS:C5680071","MEDGEN:1842277"],"synonyms":[{"name":"DORV with atrioventricular septal defect, pulmonary stenosis, heterotaxy","type":"exact"}],"termid":"MONDO:0018499","xrefs":{"Monarch":{"xref_id":"0018499"}}}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: MONDO:0005285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kidney stone (obsolete MONDO:0005285)","termid":"MONDO:0005285","xrefs":{"Monarch":{"xref_id":"0005285"}}}


id: SO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin_of_replication that is used for the amplification of a chromosomal nucleic acid sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplification_origin","synonyms":[{"name":"amplification origin","type":"exact"}],"termid":"SO:0000750"}


id: PBO:0054452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1849","termid":"PBO:0054452"}


id: GO:1900708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"negatively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tensidol A biosynthetic process","synonyms":[{"name":"down regulation of tensidol A anabolism","type":"exact"},{"name":"down regulation of tensidol A biosynthesis","type":"exact"},{"name":"down regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down regulation of tensidol A formation","type":"exact"},{"name":"down regulation of tensidol A synthesis","type":"exact"},{"name":"down-regulation of tensidol A anabolism","type":"exact"},{"name":"down-regulation of tensidol A biosynthesis","type":"exact"},{"name":"down-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol A formation","type":"exact"},{"name":"down-regulation of tensidol A synthesis","type":"exact"},{"name":"downregulation of tensidol A anabolism","type":"exact"},{"name":"downregulation of tensidol A biosynthesis","type":"exact"},{"name":"downregulation of tensidol A biosynthetic process","type":"exact"},{"name":"downregulation of tensidol A formation","type":"exact"},{"name":"downregulation of tensidol A synthesis","type":"exact"},{"name":"inhibition of tensidol A anabolism","type":"exact"},{"name":"inhibition of tensidol A biosynthesis","type":"exact"},{"name":"inhibition of tensidol A biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol A formation","type":"exact"},{"name":"inhibition of tensidol A synthesis","type":"exact"},{"name":"negative regulation of tensidol A anabolism","type":"exact"},{"name":"negative regulation of tensidol A biosynthesis","type":"exact"},{"name":"negative regulation of tensidol A formation","type":"exact"},{"name":"negative regulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900708"}


id: PBO:0045693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 1","termid":"PBO:0045693"}


id: PBO:0085454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Posttranscriptional regulator of phosphate and glucose metabolism; facilitates PHO4 mRNA degradation by interacting with Pop2p; regulates PHO4 mRNA stability by binding to PHO4's 3'UTR in a phosphate-dependent manner; contains highly conserved YTH (YT521-B Homology) domain that exhibits RNA-binding activity; human homolog YTHDF2 can complement yeast null mutant","termid":"PBO:0085454"}


id: RO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","termid":"RO:0003001"}


id: MONDO:0007010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveitis (obsolete MONDO:0007010)","termid":"MONDO:0007010","xrefs":{"Monarch":{"xref_id":"0007010"}}}


id: PBO:0073728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 9","termid":"PBO:0073728"}


id: PBO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 54, pseudogene","termid":"PBO:0044427"}


id: GO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/uridine permease activity (obsolete GO:0015393)","synonyms":[{"name":"uracil/uridine permease activity","type":"exact"}],"termid":"GO:0015393"}


id: PBO:0045085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 3","termid":"PBO:0045085"}


id: MONDO:0800147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is an autosomal recessive variation in the RHOG gene.","definition_xrefs":["PMID:33513601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hemophagocytic lymphohistiocytosis due to RhoG deficiency","termid":"MONDO:0800147","xrefs":{"Monarch":{"xref_id":"0800147"}}}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: PBO:0110386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3123","termid":"PBO:0110386"}


id: PBO:0055679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase H","termid":"PBO:0055679"}


id: PBO:0067180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 238, pseudogene","termid":"PBO:0067180"}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: GO:1990832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed slow movement of non-membranous molecules in nerve cell axons. It is comprised of a Slow Component a (SCa) and a Slow Component b (SCb) which differ in transport rates and protein composition.","definition_xrefs":["PMID:6378920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"slow axonal transport","termid":"GO:1990832"}


id: PBO:0052023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 1","termid":"PBO:0052023"}


id: PBO:0080277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 40 pseudogene","termid":"PBO:0080277"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: PBO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHIP1A divergent transcript","termid":"PBO:0047600"}


id: PBO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q11)","termid":"PBO:0047903"}


id: SO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA","synonyms":[{"name":"C/D-H/ACA scaRNA","type":"exact"}],"termid":"SO:0002371"}


id: GO:0017172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + O2 = 3-sulfino-L-alanine + H+.","definition_xrefs":["EC:1.13.11.20","RHEA:20441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cysteine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1614645","KEGG_REACTION:R00893","MetaCyc:CYSTEINE-DIOXYGENASE-RXN"],"termid":"GO:0017172"}


id: SO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted","synonyms":[{"name":"maternally imprinted","type":"exact"}],"termid":"SO:0000135"}


id: PBO:0114351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Dip5","termid":"PBO:0114351"}


id: GO:0102719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eugenol + S-adenosyl-L-methionine = H+ + O-methyleugenol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:eugenol-O-methyltransferase activity (obsolete GO:0102719)","termid":"GO:0102719"}


id: GO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to absence of light","synonyms":[{"name":"cellular response to darkness","type":"related"}],"termid":"GO:0071485"}


id: GO:1902086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumagillin.","definition_xrefs":["PMID:23488861","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumagillin biosynthetic process","synonyms":[{"name":"fumagillin anabolism","type":"exact"},{"name":"fumagillin biosynthesis","type":"exact"},{"name":"fumagillin formation","type":"exact"},{"name":"fumagillin synthesis","type":"exact"}],"termid":"GO:1902086"}


id: GO:0006213
data:
  {"annotated_genes":["SJAG_05029","SJAG_04264","SJAG_00885","SJAG_00957","SJAG_03771","SJAG_01673","SJAG_00694","SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105511,107276],"is_not":false,"summary":null,"term":"GO:0006213"},{"annotations":[69613,69774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[97726,113832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01673":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleoside metabolism","type":"exact"}],"termid":"GO:0006213","terms_by_termid":{"GO:0006213":null,"GO:0009972":null,"GO:0043097":null,"GO:0046132":null,"GO:0046135":null}}


id: MOD:00929
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a lactose carbonyl group and an L-lysine to form a Schiff-base or an Amadori ketosamine lysine adduct.","definition_xrefs":["Unimod:512","PubMed:9606156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"lactose glycated lysine","synonyms":[{"name":"CARBOHYD N-linked (Lac) (glycation) lysine","type":"exact"},{"name":"Hex(2)","type":"related"},{"name":"Lactosylation","type":"related"}],"termid":"MOD:00929"}


id: PBO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 111","termid":"PBO:0071109"}


id: MONDO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis, fulminant viral, susceptibility to","secondary_identifiers":["UMLS:C5231406","OMIM:618549","MEDGEN:1684882"],"synonyms":[{"name":"FVH","type":"related"},{"name":"HEPATITIS, FULMINANT VIRAL, SUSCEPTIBILITY TO","type":"related"}],"termid":"MONDO:0032809","xrefs":{"Monarch":{"xref_id":"0032809"}}}


id: PBO:0068827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 65, pseudogene","termid":"PBO:0068827"}


id: PBO:0082633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in Golgi and endosomes; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; diploid deletion strain has high budding index","termid":"PBO:0082633"}


id: PBO:0031390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine","termid":"PBO:0031390"}


id: PBO:0072546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 76","termid":"PBO:0072546"}


id: GO:0006722
data:
  {"annotated_genes":["SJAG_03360","SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61793,66503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triterpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"triterpene metabolic process","type":"narrow"},{"name":"triterpene metabolism","type":"narrow"},{"name":"triterpenoid metabolism","type":"exact"}],"termid":"GO:0006722","terms_by_termid":{"GO:0016104":null}}


id: GO:0033484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: PBO:0040627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF family member 2","termid":"PBO:0040627"}


id: SO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat variant containing fewer repeat units than the reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_change","termid":"SO:0002161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_contraction","synonyms":[{"name":"short tandem repeat contraction","type":"exact"},{"name":"str contraction","type":"exact"}],"termid":"SO:0002163"}


id: PBO:0027121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis","termid":"PBO:0027121"}


id: PBO:0113121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident glycoprotein involved in high-pressure tolerance; proposed role promoting proper folding of nutrient permeases in the ER during hydrostatic pressure stress; contains two transmembrane domains, a C-terminal cytoplasmic domain and a luminal region containing 12 N-linked glycans; null mutant is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0113121"}


id: GO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex remodeling","synonyms":[{"name":"protein-DNA complex remodelling","type":"exact"}],"termid":"GO:0001120"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: GO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIa hypersensitivity","synonyms":[{"name":"down regulation of type IIa hypersensitivity","type":"exact"},{"name":"down-regulation of type IIa hypersensitivity","type":"exact"},{"name":"downregulation of type IIa hypersensitivity","type":"exact"},{"name":"inhibition of type IIa hypersensitivity","type":"narrow"}],"termid":"GO:0001797"}


id: GO:2000835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of androgen secretion","termid":"GO:2000834"},{"relation_name":"negatively_regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of androgen secretion","termid":"GO:2000835"}


id: PBO:0078445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P","termid":"PBO:0078445"}


id: MONDO:0002664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the extrahepatic bile ducts. It is characterized by the presence of signet ring malignant epithelial cells.","definition_xrefs":["NCIT:C5776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct signet ring cell carcinoma","secondary_identifiers":["UMLS:C0861859","DOID:3494","MEDGEN:163667"],"synonyms":[{"name":"bile duct signet Ring cell carcinoma","type":"exact"},{"name":"bile duct signet ring cell carcinoma","type":"exact"},{"name":"extrahepatic bile duct signet Ring cell carcinoma","type":"exact"},{"name":"signet Ring cell bile duct carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of bile duct","type":"exact"},{"name":"signet Ring cell carcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0002664","xrefs":{"Monarch":{"xref_id":"0002664"}}}


