# terms

id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: PBO:0057525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642b","termid":"PBO:0057525"}


id: PBO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K37 methyltransferase Set7","termid":"PBO:0090173"}


id: MONDO:0018473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperlipoproteinemia (HLP) type 3 is a rare combined hyperlipidemia characterized by high levels of cholesterol and triglycerides, transported by intermediate density lipoproteins (IDLs), and a high risk of premature atherosclerosis and cardiovascular disease.","definition_xrefs":["Orphanet:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hyperlipoproteinemia type 3","secondary_identifiers":["UMLS:C0020479","MedDRA:10060751","SCTID:398796005","GARD:6703","OMIM:617347","DOID:3145","MEDGEN:9364"],"synonyms":[{"name":"Broad beta disease","type":"related"},{"name":"Broad-betalipoproteinemia","type":"exact"},{"name":"HLP type 3","type":"exact"},{"name":"apolipoprotein E, deficiency or defect of","type":"related"},{"name":"carbohydrate induced hyperlipemia","type":"exact"},{"name":"coronary artery disease, Severe, Susceptibility to","type":"related"},{"name":"dysbetalipoproteinemia","type":"related"},{"name":"dysbetalipoproteinemia due to defect in apolipoprotein E-D","type":"related"},{"name":"dyslipidaemia type 3","type":"exact"},{"name":"dyslipidemia type 3","type":"exact"},{"name":"familial Hyperbeta- and Prebetalipoproteinemia","type":"related"},{"name":"familial dysbetalipoproteinemia","type":"exact"},{"name":"familial hypercholesterolaemia with hyperlipaemia","type":"related"},{"name":"familial hypercholesterolemia with hyperlipemia","type":"related"},{"name":"familial hyperlipoproteinemia type 3","type":"exact"},{"name":"familial type 3 hyperlipoproteinemia","type":"exact"},{"name":"floating-betalipoproteinemia","type":"related"},{"name":"hyperlipemia with Familial Hypercholesterolemic xanthomatosis","type":"related"},{"name":"hyperlipidemia type 3","type":"exact"},{"name":"hyperlipoproteinemia type III","type":"exact"},{"name":"hyperlipoproteinemia, type III","type":"related"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 5","type":"related"},{"name":"remnant disease","type":"exact"},{"name":"remnant hyperlipidemia","type":"exact"},{"name":"remnant removal disease","type":"related"}],"termid":"MONDO:0018473","xrefs":{"Monarch":{"xref_id":"0018473"}}}


id: MONDO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parkinsonism-dystonia, infantile, 2 (obsolete MONDO:0054836)","termid":"MONDO:0054836","xrefs":{"Monarch":{"xref_id":"0054836"}}}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: PBO:0005496
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts detected","termid":"PBO:0005496"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein. May also hydrolyze diacylglycerol and phospholipids present in lipoproteins.","definition_xrefs":["EC:3.1.1.34","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triacylglycerol lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-2395768","Reactome:R-HSA-1482811","Reactome:R-HSA-6789310","Reactome:R-HSA-8979996","Reactome:R-HSA-8980228","Reactome:R-HSA-174757"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: GO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-alanine, the D-enantiomer of the amino acid alanine.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-alanine metabolic process","termid":"GO:0046436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-alanine catabolic process","synonyms":[{"name":"(2R)-2-aminopropanoic acid catabolic process","type":"exact"}],"termid":"GO:0055130"}


id: PBO:0044905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 2","termid":"PBO:0044905"}


id: PBO:0110481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3124","termid":"PBO:0110481"}


id: GO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"activation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"positive regulation of immune response-dependent tolerance induction","type":"exact"},{"name":"stimulation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"up regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"up-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"upregulation of tolerance induction dependent upon immune response","type":"exact"}],"termid":"GO:0002654"}


id: GO:0051223
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245","SJAG_02592","SJAG_04464","SJAG_01805","SJAG_01311","SJAG_03453","SJAG_04509","SJAG_04343","SJAG_03970","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[105828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[111025,100439,101856,93776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[94342,102388,90813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[87856,91987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051223","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null}}


id: PBO:0029494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_anaphase_II","termid":"PBO:0029494"}


id: GO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyrroloquinoline quinone, PQQ, the coenzyme or the prosthetic group of certain alcohol dehydrogenases and glucose dehydrogenases.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrroloquinoline quinone binding","synonyms":[{"name":"PQQ binding","type":"exact"}],"termid":"GO:0070968"}


id: PBO:0114286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mon1-Ccz1 GEF complex subunit Ccz1","termid":"PBO:0114286"}


id: MONDO:0023569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"corpus callosum, agenesis of","termid":"MONDO:0009022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Kozlowski Ouvrier syndrome","secondary_identifiers":["MESH:C537508","UMLS:C2931512","MEDGEN:444073"],"synonyms":[{"name":"agenesis of the corpus callosum with intellectual disability and osseous lesions","type":"related"},{"name":"agenesis of the corpus callosum with mental retardation and osseous lesions","type":"related"}],"termid":"MONDO:0023569","xrefs":{"Monarch":{"xref_id":"0023569"}}}


id: MONDO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the liver. Representative examples include angiosarcoma, undifferentiated (embryonal) sarcoma, rhabdomyosarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C4437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver sarcoma","secondary_identifiers":["SCTID:254601002","DOID:270","UMLS:C0345906","MEDGEN:87522"],"synonyms":[{"name":"hepatic sarcoma","type":"exact"},{"name":"liver sarcoma","type":"exact"},{"name":"sarcoma of liver","type":"exact"},{"name":"sarcoma of the liver","type":"exact"}],"termid":"MONDO:0002397","xrefs":{"Monarch":{"xref_id":"0002397"}}}


id: PBO:0044897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPTOR antisense RNA 1","termid":"PBO:0044897"}


id: PBO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 1","termid":"PBO:0044047"}


id: GO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular complex that binds lipoprotein receptors VLDLR and APOER2, cadherin-related neuronal receptors (CNRs) or alpha3beta1 integrin and induces various downstream, reelin-dependent, phosphorylation cascades. It ultimately affects polarization, differentiation, neuronal migration and layer formation in the embryonic brain and neuron growth, maturation, and synaptic activity in the postnatal and adult brain.","definition_xrefs":["PMID:21844191","GOC:bhm","PMID:28887403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"reelin complex","termid":"GO:0110157"}


id: MONDO:0016298
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84993,87223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010799"}]},"cv_name":"mondo","definition":"Postlingual non-syndromic genetic deafness is a rare, genetically highly heterogeneous otorhinolaryngologic disease, resulting from inner and/or middle ear or hearing nerve anomalies, typically characterized by progressive, bilateral, moderate to profound hearing loss (mean sensorineural hearing impairment equal to 40 dB or more for 500-, 1,000-, and 2,000-Hz frequency tones in the better ear) which occurs after the onset of speech development and is not associated with visible external ear abnormalities or any other medical problems. Language development is not initially significantly delayed.","definition_xrefs":["Orphanet:216452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"postlingual non-syndromic genetic hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1641874","UMLS:C4706678","SCTID:764097002"],"synonyms":[{"name":"isolated postlingual genetic deafness","type":"narrow"},{"name":"postlingual non-syndromic genetic deafness","type":"narrow"}],"termid":"MONDO:0016298","terms_by_termid":{"MONDO:0010799":null},"xrefs":{"Monarch":{"xref_id":"0016298"}}}


id: GO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerophosphate(n) + CDP-glycerol = glycerophosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CDP-glycerol glycerophosphotransferase activity","secondary_identifiers":["RHEA:13565","MetaCyc:TEICHOICSYN4-RXN"],"synonyms":[{"name":"CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase activity","type":"related"},{"name":"CDPglycerol glycerophosphotransferase activity","type":"related"},{"name":"CGPTase activity","type":"related"},{"name":"cytidine diphosphoglycerol glycerophosphotransferase activity","type":"related"},{"name":"glycerophosphate synthetase activity","type":"related"},{"name":"poly(glycerol phosphate) polymerase activity","type":"related"},{"name":"teichoic acid glycerol transferase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047355"}


id: PBO:0116908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0643 family","termid":"PBO:0116908"}


id: GO:0018394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-lysine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine acetylation","termid":"GO:0018394"}


id: PBO:0050652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 2, pseudogene","termid":"PBO:0050652"}


id: GO:0004314
data:
  {"annotated_genes":["SJAG_03972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59687,70000],"is_not":false,"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-malonyltransferase activity","termid":"GO:0016419"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MALONYL-COA-ACP-TRANSACYL-RXN","Reactome:R-HSA-8933547"],"synonyms":[{"name":"ACP S-malonyltransferase activity","type":"exact"},{"name":"FabD","type":"related"},{"name":"MAT","type":"related"},{"name":"MCAT activity","type":"related"},{"name":"[acyl-carrier protein] S-malonyltransferase activity","type":"exact"},{"name":"acyl carrier protein malonyltransferase activity","type":"related"},{"name":"acyl carrier proteinmalonyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-malonyltransferase activity","type":"related"},{"name":"malonyl coenzyme A-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl transacylase activity","type":"broad"},{"name":"malonyl transferase activity","type":"broad"},{"name":"malonyl-CoA-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:ACP transacylase activity","type":"related"},{"name":"malonyl-CoA:AcpM transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl-carrier-protein S-malonyltransferase activity","type":"related"}],"termid":"GO:0004314","terms_by_termid":{"GO:0004314":null}}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: PBO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 41","termid":"PBO:0052673"}


id: PBO:0090408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Rsv1","termid":"PBO:0090408"}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: PBO:0052270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4D","termid":"PBO:0052270"}


id: PBO:0055473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2906","termid":"PBO:0055473"}


id: MONDO:0006471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the trachea. It spreads to the submucosal tracheal tissue and to regional lymph nodes.","definition_xrefs":["NCIT:C6051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea carcinoma","termid":"MONDO:0003184"},{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tracheal adenoid cystic carcinoma","secondary_identifiers":["SCTID:254619006","DOID:4875","MEDGEN:91058","UMLS:C0345945","EFO:1000598"],"synonyms":[{"name":"adenoid cystic carcinoma of the trachea","type":"exact"},{"name":"adenoid cystic carcinoma of trachea","type":"exact"},{"name":"trachea adenoid cystic carcinoma","type":"exact"},{"name":"tracheal adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006471","xrefs":{"Monarch":{"xref_id":"0006471"}}}


id: FYPO:0008318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to sulfur starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during sulfur starvation","termid":"FYPO:0008318"}


id: GO:2000122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of stomatal complex development","termid":"GO:2000038"},{"relation_name":"negatively_regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal complex development","termid":"GO:2000122"}


id: GO:0070977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone maturation","termid":"GO:0070977"}


id: MONDO:0015530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A headache disorder characterized by episodes of unilateral, short lasting pain and associated ipsilateral cranial autonomic symptoms.","definition_xrefs":["NCIT:C117074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal autonomic cephalalgia","secondary_identifiers":["GARD:20017","MEDGEN:327950","SCTID:449814007","MESH:D051303","UMLS:C1565172","ICD9:339.09","Orphanet:157843","icd11.foundation:607078588"],"termid":"MONDO:0015530","xrefs":{"Monarch":{"xref_id":"0015530"}}}


id: GO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host transmembrane receptor-mediated signal transduction (obsolete GO:0075114)","synonyms":[{"name":"disruption of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075114"}


id: MONDO:0016377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pitt-Hopkins-like syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by severe intellectual disability, lack of speech with normal, or mildly delayed, motor development, episodic breathing abnormalities, early-onset seizures and facial dysmorphism which only includes a wide mouth. Abnormal sleep-wake cycles, autistic behavior and stereotypic movements are commonly associated.","definition_xrefs":["GARD:0011967"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pitt-Hopkins-like syndrome","secondary_identifiers":["MEDGEN:1648432","UMLS:C4751168","GARD:11967","Orphanet:221150"],"synonyms":[{"name":"PTHSL","type":"exact"}],"termid":"MONDO:0016377","xrefs":{"Monarch":{"xref_id":"0016377"}}}


id: MONDO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"}],"gene_count":0,"genotype_count":0,"name":"obsolete muscular tumor (obsolete MONDO:0016123)","secondary_identifiers":["Orphanet:206982"],"termid":"MONDO:0016123","xrefs":{"Monarch":{"xref_id":"0016123"}}}


id: PBO:0081520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 429","termid":"PBO:0081520"}


id: PBO:0085078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes; has mRNA binding activity","termid":"PBO:0085078"}


id: GO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminolevulinate + pyruvate = 4,5-dioxopentanoate + L-alanine.","definition_xrefs":["RHEA:12480","EC:2.6.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"aminolevulinate transaminase activity","secondary_identifiers":["MetaCyc:AMINOLEVULINATE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R02271"],"synonyms":[{"name":"4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"4,5-dioxovaleric transaminase activity","type":"related"},{"name":"5-aminolevulinate:pyruvate aminotransferase activity","type":"related"},{"name":"5-aminolevulinic acid transaminase activity","type":"related"},{"name":"DOVA transaminase activity","type":"related"},{"name":"L-alanine-4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"L-alanine:4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"L-alanine:dioxovalerate transaminase activity","type":"related"},{"name":"alanine-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine-gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine:4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"aminolevulinate aminotransferase activity","type":"exact"},{"name":"aminolevulinic acid transaminase activity","type":"related"},{"name":"dioxovalerate transaminase activity","type":"related"},{"name":"gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"gamma,delta-dioxovaleric acid transaminase activity","type":"related"}],"termid":"GO:0047665"}


id: GO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["PMID:10894548","PMID:10959837","PMID:10747051","GOC:rn","PMID:10899128"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0090282)","synonyms":[{"name":"activation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"activation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0090282"}


id: PBO:0058167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4462","termid":"PBO:0058167"}


id: PBO:0050058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Y (pseudogene)","termid":"PBO:0050058"}


id: FYPO:0005591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylcholine level","synonyms":[{"name":"decreased cellular lysophosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysophosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylcholine level","type":"exact"}],"termid":"FYPO:0005591"}


id: PBO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-5","termid":"PBO:0051275"}


id: MONDO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited lysosomal storage diseases characterized by accumulation of lipids and carbohydrates in the tissues, resulting in mental disabilities and skeletal malformations.","definition_xrefs":["NCIT:C61267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"glycoproteinosis","termid":"MONDO:0017731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucolipidosis","secondary_identifiers":["DOID:0080488","MESH:D009081","GARD:18975","Orphanet:79212","MEDGEN:7731","icd11.foundation:714623911","SCTID:70528007","UMLS:C0026697"],"termid":"MONDO:0019248","xrefs":{"Monarch":{"xref_id":"0019248"}}}


id: GO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-ketoglutarate and malate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate/malate transport (obsolete GO:0006840)","synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"exact"},{"name":"mitochondrial oxoglutarate/malate transport","type":"exact"}],"termid":"GO:0006840"}


id: PBO:0017517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 Pre9 (predicted)","termid":"PBO:0017517"}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: MONDO:0015780
data:
  {"annotated_genes":["SJAG_00566","SJAG_01836","SJAG_05979","SJAG_01378","SJAG_04266","SJAG_04754","SJAG_00083","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007485"},{"annotations":[85436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013521"},{"annotations":[85070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"},{"annotations":[85273,85272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009136"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013519"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013520"},{"annotations":[85243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014600"},{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031057"},{"annotations":[86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010584"}]},"cv_name":"mondo","definition":"Dyskeratosis congenita (DC) is a rare ectodermal dysplasia that often presents with the classic triad of nail dysplasia, skin pigmentary changes, and oral leukoplakia associated with a high risk of bone marrow failure (BMF) and cancer.","definition_xrefs":["Orphanet:1775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","termid":"MONDO:0018035"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","termid":"MONDO:0020063"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","termid":"MONDO:0020195"},{"relation_name":"excluded_subClassOf","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01378":null,"SJAG_01836":null,"SJAG_04266":null,"SJAG_04627":null,"SJAG_04754":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0265965","NORD:1071","GARD:10905","MEDGEN:78580","NANDO:1200342","NANDO:2200715","NCIT:C111802","DOID:2729","icd11.foundation:1531033936","OMIMPS:127550","MedDRA:10062759","MESH:D019871","SCTID:74911008","NANDO:1200304"],"synonyms":[{"name":"DC","type":"exact"},{"name":"DKC","type":"exact"},{"name":"Hoyeraal-Hreidarsson syndrome","type":"related"},{"name":"Zinsser Cole Engman syndrome","type":"related"},{"name":"Zinsser-Engman-Cole syndrome","type":"exact"},{"name":"dyskeratosis congenita","type":"exact"}],"termid":"MONDO:0015780","terms_by_termid":{"MONDO:0007485":null,"MONDO:0009136":null,"MONDO:0010584":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0014600":null,"MONDO:0014690":null,"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0015780"}}}


id: GO:1902059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["PMID:23480775","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"negatively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"down regulation of ascus development","type":"narrow"},{"name":"down regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"down-regulation of ascus development","type":"narrow"},{"name":"down-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"downregulation of ascus development","type":"narrow"},{"name":"downregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"downregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"downregulation of perfect stage fruiting body development","type":"narrow"},{"name":"downregulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"inhibition of ascus development","type":"narrow"},{"name":"inhibition of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"inhibition of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"inhibition of perfect stage fruiting body development","type":"narrow"},{"name":"inhibition of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"negative regulation of ascus development","type":"narrow"},{"name":"negative regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"negative regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"negative regulation of perfect stage fruiting body development","type":"narrow"}],"termid":"GO:1902059"}


id: GO:0045968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone biosynthetic process","termid":"GO:0007557"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"negative regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"down regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"down-regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"downregulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"inhibition of juvenile hormone biosynthetic process","type":"narrow"},{"name":"negative regulation of juvenile hormone anabolism","type":"exact"},{"name":"negative regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"negative regulation of juvenile hormone formation","type":"exact"},{"name":"negative regulation of juvenile hormone synthesis","type":"exact"}],"termid":"GO:0045968"}


id: GO:0141142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont moves across a tissue barrier of the host to transports itself across an extracellular cellular matrix barrier or between the cells of a tissue. This involves the temporary or permanent breaching of the tissue barrier.","definition_xrefs":["PMID:26681776","PMID:19820089","PMID:20188700","PMID:29120408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated migration across host tissue barrier","termid":"GO:0141142"}


id: MONDO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schizophrenia which does not respond to commonly used treatments.","definition_xrefs":["EFO:0004609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"treatment-refractory schizophrenia","secondary_identifiers":["UMLS:C3544321","MEDGEN:1786789"],"synonyms":[{"name":"TRS","type":"broad"},{"name":"refractory schizophrenia","type":"exact"},{"name":"treatment-refractory schizophrenia","type":"exact"}],"termid":"MONDO:0005414","xrefs":{"Monarch":{"xref_id":"0005414"}}}


id: PR:O94524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega-like 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.07c","synonyms":[{"name":"Spom972h-SPCC1281.07c","type":"exact"},{"name":"glutathione-dependent dehydroascorbate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94524"}


id: PBO:0002943
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.14","termid":"PBO:0002943"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: PBO:0049045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 36","termid":"PBO:0049045"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: PR:O43081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C947.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.06c","synonyms":[{"name":"Spom972h-SPBC947.06c","type":"exact"}],"termid":"PR:O43081"}


id: GO:2000565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000565"}


id: PBO:0070577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 43","termid":"PBO:0070577"}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: PBO:0109114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 8, tRNA N3-cytidine","termid":"PBO:0109114"}


id: PBO:0064087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein beta","termid":"PBO:0064087"}


id: PBO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1","termid":"PBO:0060390"}


id: PBO:0034228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fasciculates_with","termid":"PBO:0034228"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: PBO:0029816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape","termid":"PBO:0029816"}


id: FYPO:0004359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PMID:11988741","PomBase:mah","GO:0033314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abolished mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0004359"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: MONDO:0005977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of neurosyphilis characterized by slowly progressive degeneration of the spinal cord. Signs and symptoms include pain, ataxia, loss of coordination, personality changes, blindness, urinary incontinence, dementia, and degeneration of the joints.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurosyphilis","termid":"MONDO:0004944"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tabes dorsalis","secondary_identifiers":["MEDGEN:21065","icd11.foundation:1131342025","UMLS:C0039223","DOID:10027","SCTID:316841006","ICD10CM:A52.11","MESH:D013606","ICD9:094.0","NCIT:C35057"],"synonyms":[{"name":"posterior spinal sclerosis","type":"exact"},{"name":"syphilitic myelopathy","type":"related"},{"name":"tabes dorsalis - neurosyphilis","type":"exact"}],"termid":"MONDO:0005977","xrefs":{"Monarch":{"xref_id":"0005977"}}}


id: MONDO:0003578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant non-seminomatous germ cell tumor that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"},{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal nonseminomatous germ cell tumor","secondary_identifiers":["MEDGEN:233662","DOID:5677","NCIT:C8885","UMLS:C1334582"],"synonyms":[{"name":"cancer of extragonadal non-seminomatous germ cell","type":"exact"},{"name":"cancer of the extragonadal non-seminomatous germ cell","type":"exact"},{"name":"extragonadal non-seminomatous germ cell cancer","type":"exact"},{"name":"extragonadal primary Nonseminoma","type":"exact"},{"name":"malignant extragonadal Nonseminoma","type":"exact"},{"name":"malignant extragonadal non-seminomatous germ cell neoplasm","type":"exact"},{"name":"malignant extragonadal non-seminomatous germ cell tumor","type":"exact"},{"name":"malignant extragonadal non-seminomatous germ cell tumour","type":"exact"},{"name":"malignant neoplasm of extragonadal non-seminomatous germ cell","type":"exact"},{"name":"malignant neoplasm of the extragonadal non-seminomatous germ cell","type":"exact"},{"name":"malignant tumor of extragonadal non-seminomatous germ cell","type":"exact"},{"name":"malignant tumor of the extragonadal non-seminomatous germ cell","type":"exact"},{"name":"malignant tumour of extragonadal non-seminomatous germ cell","type":"exact"},{"name":"malignant tumour of the extragonadal non-seminomatous germ cell","type":"exact"},{"name":"primary malignant extragonadal Nonseminoma","type":"exact"}],"termid":"MONDO:0003578","xrefs":{"Monarch":{"xref_id":"0003578"}}}


id: PBO:0064369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 1","termid":"PBO:0064369"}


id: GO:0033393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homogalacturonan, a pectidic polymer, characterized by a backbone of 1,4-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"homogalacturonan catabolic process","secondary_identifiers":["MetaCyc:PWY-1081"],"synonyms":[{"name":"homogalacturonan breakdown","type":"exact"},{"name":"homogalacturonan catabolism","type":"exact"},{"name":"homogalacturonan degradation","type":"exact"}],"termid":"GO:0033393"}


id: PATO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear","termid":"PATO:0001199"}


id: PBO:0060626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5","termid":"PBO:0060626"}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: PBO:0046953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 76 member A","termid":"PBO:0046953"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: GO:0102367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2alpha-hydroxytaxusin + NADPH + O2 + H+ = 2alpha, 7beta-dihydroxytaxusin + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-alpha-hydroxytaxusin 7-beta-hydroxylase activity (obsolete GO:0102367)","termid":"GO:0102367"}


id: GO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule organization","synonyms":[{"name":"dense core granule organisation","type":"exact"}],"termid":"GO:0061109"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-6-methylthiohexanoate aminotransferase activity (obsolete GO:0103105)","termid":"GO:0103105"}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: MONDO:0006538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatitis herpetiformis (obsolete MONDO:0006538)","termid":"MONDO:0006538","xrefs":{"Monarch":{"xref_id":"0006538"}}}


id: GO:0052496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the symbiont xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont xylem (obsolete GO:0052496)","termid":"GO:0052496"}


id: MONDO:0012931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the APOL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal segmental glomerulosclerosis 4, susceptibility to","secondary_identifiers":["OMIM:612551","MEDGEN:390820","UMLS:C2675525"],"synonyms":[{"name":"APOL1 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS4","type":"related"},{"name":"end-stage renal disease, nondiabetic, susceptibility to","type":"related"},{"name":"focal segmental glomerulosclerosis 4, susceptibility to","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in APOL1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 4, susceptibility to","type":"exact"},{"name":"susceptibility to focal segmental glomerulosclerosis 4","type":"related"}],"termid":"MONDO:0012931","xrefs":{"Monarch":{"xref_id":"0012931"}}}


id: GO:1904610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23196670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"response to PCB 126","type":"exact"}],"termid":"GO:1904610"}


id: PBO:0061276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase organizer 1","termid":"PBO:0061276"}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: MONDO:0013824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CPLANE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 17","secondary_identifiers":["UMLS:C3553264","NCIT:C175702","DOID:0110986","MEDGEN:766178","GARD:15824","OMIM:614615"],"synonyms":[{"name":"CPLANE1 Joubert syndrome","type":"exact"},{"name":"JBTS17","type":"exact"},{"name":"Joubert syndrome 17","type":"exact"},{"name":"Joubert syndrome caused by mutation in CPLANE1","type":"exact"},{"name":"Joubert syndrome type 17","type":"exact"}],"termid":"MONDO:0013824","xrefs":{"Monarch":{"xref_id":"0013824"}}}


id: GO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending thin limb development","termid":"GO:0072022"}


id: GO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyguanosine + ATP = ADP + dGMP + 2 H+.","definition_xrefs":["RHEA:19201","EC:2.7.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"deoxyguanosine kinase activity","secondary_identifiers":["KEGG_REACTION:R01967","MetaCyc:DEOXYGUANOSINE-KINASE-RXN"],"synonyms":[{"name":"(dihydroxypropoxymethyl)guanine kinase activity","type":"related"},{"name":"2'-deoxyguanosine kinase activity","type":"related"},{"name":"ATP:deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"NTP-deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyguanosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004138"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: PBO:0089322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1","termid":"PBO:0089322"}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: GO:0070594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone response element (JHRE), a conserved sequence found in the promoters of genes whose expression is regulated in response to juvenile hormone.","definition_xrefs":["GOC:sart","PMID:17956872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674","GO:0000976"],"is_obsolete":false,"name":"juvenile hormone response element binding","synonyms":[{"name":"JHRE binding","type":"exact"}],"termid":"GO:0070594"}


id: MONDO:0035499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic primary lymphedema characterized by unilateral or bilateral lower limb lymphedema of variable severity. The condition shows almost complete penetrance with onset in childhood or adolescence in females, whereas in males it shows incomplete penetrance with later onset of disease. Lymphoscintigraphy in more severely affected individuals reveals lymphatic abnormalities consistent with lymphangiectasia, valve dysfunction, and thoracic duct reflux.","definition_xrefs":["Orphanet:569816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CELSR1-related late-onset primary lymphedema","secondary_identifiers":["UMLS:C5681848","GARD:22306","MEDGEN:1802645"],"termid":"MONDO:0035499","xrefs":{"Monarch":{"xref_id":"0035499"}}}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: PBO:0038641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 8","termid":"PBO:0038641"}


id: PBO:0083309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1","termid":"PBO:0083309"}


id: MONDO:0020297
data:
  {"annotated_genes":["SJAG_03453","SJAG_02536","SJAG_02342","SJAG_01181","SJAG_02923","SJAG_00993","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[84991,84990,84992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[84997,84995,84996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[85153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[87220,87221,87222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85476,85477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02536":null,"SJAG_02923":null,"SJAG_03126":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome and Noonan-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826127","Orphanet:98733","UMLS:C5681679","MESH:C537846","GARD:19561"],"termid":"MONDO:0020297","terms_by_termid":{"MONDO:0008104":null,"MONDO:0009026":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0020297"}}}


id: PBO:0059481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moesin pseudogene 1","termid":"PBO:0059481"}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: PBO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VHT1","termid":"PBO:0002776"}


id: GO:0035488
data:
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id: GO:0047238
data:
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id: GO:0003723
data:
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id: MONDO:0100251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","secondary_identifiers":["MEDGEN:360297","Orphanet:306661","UMLS:C1876187","DOID:0111063","NCIT:C131851","GARD:10879"],"synonyms":[{"name":"HFTC","type":"exact"},{"name":"HHS","type":"broad"},{"name":"PHPTC","type":"exact"},{"name":"cortical hyperostosis with hyperphosphatemia","type":"exact"},{"name":"familial Teutschlaender disease","type":"exact"},{"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","type":"exact"},{"name":"hypercalcemic tumoral calcinosis","type":"exact"},{"name":"hyperostosis with hyperphosphatemia","type":"exact"},{"name":"hyperphosphatemia hyperostosis","type":"exact"},{"name":"hyperphosphatemia hyperostosis syndrome","type":"exact"},{"name":"hyperphosphatemia tumoral calcinosis","type":"exact"},{"name":"hyperphosphatemic familial tumoral calcinosis","type":"exact"},{"name":"lipocalcinogranulomatosis","type":"exact"},{"name":"morbus Teutschlaender","type":"exact"},{"name":"primary hyperphosphatemic tumoral calcinosis","type":"exact"},{"name":"tumoral calcinosis with hyperphosphatemia","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"related"}],"termid":"MONDO:0100251","xrefs":{"Monarch":{"xref_id":"0100251"}}}


id: MOD:01912
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one bromine atom.","definition_xrefs":["Unimod:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated residue","synonyms":[{"name":"Br1Res","type":"exact"}],"termid":"MOD:01912"}


id: MONDO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular hypotension","termid":"MONDO:0004390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary eye hypotony","secondary_identifiers":["MEDGEN:509656","ICD9:360.31","UMLS:C0154782","DOID:12349","SCTID:2251002"],"synonyms":[{"name":"primary hypotony of eye","type":"exact"}],"termid":"MONDO:0001503","xrefs":{"Monarch":{"xref_id":"0001503"}}}


id: MONDO:0014725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"spastic tetraplegia-thin corpus callosum-progressive postnatal microcephaly syndrome","secondary_identifiers":["GARD:13425","MEDGEN:900192","UMLS:C4225254","OMIM:616657","DOID:0070537","Orphanet:447997"],"synonyms":[{"name":"ASCT1 deficiency","type":"exact"},{"name":"SPATCCM","type":"related"},{"name":"spastic quadriplegia-thin corpus callosum-progressive postnatal microcephaly syndrome","type":"exact"},{"name":"spastic tetraplegia, thin corpus callosum, and progressive microcephaly","type":"related"},{"name":"spastic tetraplegia-thin corpus callosum-progressive postnatal microcephaly syndrome","type":"exact"}],"termid":"MONDO:0014725","xrefs":{"Monarch":{"xref_id":"0014725"}}}


id: FYPO:0006719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission does not occur during a cellular response to osmotic stress. Normally, mitochondria undergo fission when the cell is exposed to hyperosmotic conditions.","definition_xrefs":["PomBase:mah","PMID:28515144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitochondrial fission during cellular response to osmotic stress","synonyms":[{"name":"abolished mitochondrial fission during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial fission during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abolished mitochondrial fragmentation during cellular response to osmotic stress","type":"exact"},{"name":"mitochondrial fission abolished during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006719"}


id: PATO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"buoyancy","termid":"PATO:0001420"}


id: PBO:0027105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_rDNA","termid":"PBO:0027105"}


id: GO:0010437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative cleavage of carotenoids at the (9, 10) and/or (9', 10') double bond.","definition_xrefs":["PMID:16459333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9,10 (9', 10')-carotenoid-cleaving dioxygenase activity","termid":"GO:0010437"}


id: GO:0042121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"alginic acid biosynthetic process","synonyms":[{"name":"alginate biosynthesis","type":"exact"},{"name":"alginate biosynthetic process","type":"exact"},{"name":"alginic acid anabolism","type":"exact"},{"name":"alginic acid biosynthesis","type":"exact"},{"name":"alginic acid formation","type":"exact"},{"name":"alginic acid synthesis","type":"exact"}],"termid":"GO:0042121"}


id: PBO:0060770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 1","termid":"PBO:0060770"}


id: GO:0048787
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters.","definition_xrefs":["PMID:12923177","PMID:12812759","PMID:3152289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone membrane","secondary_identifiers":["NIF_Subcellular:sao2038461087"],"synonyms":[{"name":"active zone plasma membrane","type":"exact"},{"name":"active zone pre-synaptic plasma membrane","type":"exact"},{"name":"active zone presynaptic plasma membrane","type":"exact"},{"name":"pre-synaptic active zone membrane","type":"exact"}],"termid":"GO:0048787"}


id: PBO:0030123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-canavanine","termid":"PBO:0030123"}


id: GO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 trimethylation (obsolete GO:0036124)","termid":"GO:0036124"}


id: PBO:0116193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase, Fox2","termid":"PBO:0116193"}


id: GO:0036214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is positioned or maintained in a specific location.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile ring localization (obsolete GO:0036214)","termid":"GO:0036214"}


id: MONDO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of mitochondrial genome maintenance.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA maintenance syndrome","secondary_identifiers":["Orphanet:352456","UMLS:C5679930","MEDGEN:1826064","GARD:21520"],"synonyms":[{"name":"inborn error of mitochondrial genome maintenance","type":"exact"},{"name":"inborn mitochondrial genome maintenance disorder","type":"exact"},{"name":"mtDNA maintenance syndrome","type":"exact"},{"name":"rare inborn error of mitochondrial genome maintenance","type":"exact"}],"termid":"MONDO:0018121","xrefs":{"Monarch":{"xref_id":"0018121"}}}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: GO:1903899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["GOC:TermGenie","PMID:22013210","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of PERK-mediated unfolded protein response","termid":"GO:1903897"},{"relation_name":"positively_regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"activation of PERK branch of UPR","type":"narrow"},{"name":"activation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of PERK-mediated unfolded protein response","type":"narrow"},{"name":"activation of PKR-like ER kinase signal transduction","type":"narrow"},{"name":"activation of UPR signaling by PERK stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"narrow"},{"name":"positive regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"positive regulation of PERK branch of UPR","type":"exact"},{"name":"positive regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"positive regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up regulation of PERK branch of UPR","type":"exact"},{"name":"up regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"up-regulation of PERK branch of UPR","type":"exact"},{"name":"up-regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"up-regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"upregulation of PERK branch of UPR","type":"exact"},{"name":"upregulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of PERK-mediated unfolded protein response","type":"exact"},{"name":"upregulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"upregulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903899"}


id: PBO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 antisense RNA 1","termid":"PBO:0052144"}


id: PBO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor Ncb2 (predicted)","termid":"PBO:0018017"}


id: GO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein trimer, a macromolecular structure consisting of three noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein trimerization","synonyms":[{"name":"protein trimer assembly","type":"exact"},{"name":"protein trimer biosynthesis","type":"exact"},{"name":"protein trimer biosynthetic process","type":"exact"},{"name":"protein trimer formation","type":"exact"}],"termid":"GO:0070206"}


id: PBO:0059319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 2","termid":"PBO:0059319"}


id: PBO:0055428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2858","termid":"PBO:0055428"}


id: MONDO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic ductal carcinoma (obsolete MONDO:0002699)","termid":"MONDO:0002699","xrefs":{"Monarch":{"xref_id":"0002699"}}}


id: PBO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0030158"}


id: PBO:0030316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_myristoyl-CoA_ligase_activity","termid":"PBO:0030316"}


id: PBO:0084190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo","termid":"PBO:0084190"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: PBO:0015224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase I and farnesyltransferase alpha subunit Cwp1","termid":"PBO:0015224"}


id: GO:0009146
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate breakdown","type":"exact"},{"name":"purine nucleoside triphosphate catabolism","type":"exact"},{"name":"purine nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009146","terms_by_termid":{"GO:0035863":null}}


id: PBO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INCENP, Pic1","termid":"PBO:0004195"}


id: PBO:0045162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 2","termid":"PBO:0045162"}


id: GO:0021906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of the hindbrain-spinal cord boundary.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","PMID:11262869","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain-spinal cord boundary formation","termid":"GO:0021906"}


id: MONDO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SPTB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary spherocytosis type 2","secondary_identifiers":["DOID:0110917","GARD:16149","OMIM:616649","MEDGEN:436112","UMLS:C2674219"],"synonyms":[{"name":"HS2","type":"exact"},{"name":"SPH2","type":"exact"},{"name":"SPTB hereditary spherocytosis","type":"exact"},{"name":"hereditary spherocytosis 2","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SPTB","type":"exact"},{"name":"hereditary spherocytosis type 2","type":"exact"},{"name":"spherocytosis, hereditary, 2","type":"related"},{"name":"spherocytosis, type 2","type":"exact"}],"termid":"MONDO:0000913","xrefs":{"Monarch":{"xref_id":"0000913"}}}


id: PBO:0056559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 7","termid":"PBO:0056559"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: PBO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 4","termid":"PBO:0060739"}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: SO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenosine","secondary_identifiers":["RNAMOD:003"],"synonyms":[{"name":"N6 methyladenosine","type":"exact"},{"name":"N6-methyladenosine","type":"exact"},{"name":"m6A","type":"exact"}],"termid":"SO:0001297"}


id: GO:0097088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-17F due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["Wikipedia:Interleukin_17","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-17F production","synonyms":[{"name":"IL-17F production","type":"exact"}],"termid":"GO:0097088"}


id: PBO:0029386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029386"}


id: GO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cuticle pigmentation","termid":"GO:0048079"}


id: GO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate + H+.","definition_xrefs":["RHEA:15449","EC:1.13.11.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"homogentisate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02519","UM-BBD_reactionID:r0105","Reactome:R-HSA-71164","MetaCyc:HOMOGENTISATE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"homogentisate dioxygenase activity","type":"related"},{"name":"homogentisate oxidase activity","type":"related"},{"name":"homogentisate oxygenase activity","type":"related"},{"name":"homogentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"homogentisic acid oxidase activity","type":"related"},{"name":"homogentisic acid oxygenase activity","type":"related"},{"name":"homogentisic oxygenase activity","type":"related"},{"name":"homogentisicase activity","type":"related"}],"termid":"GO:0004411"}


id: PBO:0004661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA interacting protein Hip3","termid":"PBO:0004661"}


id: GO:1903387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"positively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of homophilic cell adhesion","synonyms":[{"name":"activation of homophilic cell adhesion","type":"narrow"},{"name":"up regulation of homophilic cell adhesion","type":"exact"},{"name":"up-regulation of homophilic cell adhesion","type":"exact"},{"name":"upregulation of homophilic cell adhesion","type":"exact"}],"termid":"GO:1903387"}


id: MONDO:0010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic neoplasms of the thyroid gland, and kidney. (NCI05)","definition_xrefs":["NCIT:C7072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic neoplasm","secondary_identifiers":["OMIM:553000","UMLS:C1378050","MEDGEN:237181"],"synonyms":[{"name":"oncocytic neoplasm","type":"exact"},{"name":"oncocytic tumor","type":"exact"},{"name":"oncocytic tumour","type":"exact"},{"name":"oncocytoma","type":"broad"},{"name":"oncocytoma, benign","type":"exact"}],"termid":"MONDO:0010795","xrefs":{"Monarch":{"xref_id":"0010795"}}}


id: PBO:0063469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 2","termid":"PBO:0063469"}


id: PBO:0083303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of MRS2 gene required for respiratory growth","termid":"PBO:0083303"}


id: MONDO:1040042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS7 gene.","definition_xrefs":["PMID:19797195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS7-related ciliopathy","synonyms":[{"name":"BBS7-related ciliopathy","type":"exact"}],"termid":"MONDO:1040042","xrefs":{"Monarch":{"xref_id":"1040042"}}}


id: MONDO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary epithelial neoplasm that involves the urinary bladder urothelium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary urothelial neoplasm","termid":"MONDO:0003443"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder papillary urothelial neoplasm","secondary_identifiers":["NCIT:C39857","DOID:5432","MEDGEN:267741","UMLS:C1511197"],"synonyms":[{"name":"bladder papillary transitional cell neoplasm","type":"exact"},{"name":"bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder papillary transitional cell neoplasm","type":"exact"},{"name":"urinary bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder urothelium papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0003442","xrefs":{"Monarch":{"xref_id":"0003442"}}}


id: GO:0032242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside transport","termid":"GO:0032242"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["ISBN:978-0-07-181001-2","GOC:dos","Wikipedia:Neuropeptide&oldid=713905176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: PBO:0073279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14","termid":"PBO:0073279"}


id: PR:Q9URY1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.03","synonyms":[{"name":"Spom972h-ppk16","type":"exact"},{"name":"meiotically up-regulated gene 92 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY1"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: GO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-lysine catabolic process to glutarate, by acetylation","secondary_identifiers":["MetaCyc:LYSDEGII-PWY"],"synonyms":[{"name":"L-lysine breakdown to glutarate, by acetylation","type":"exact"},{"name":"L-lysine degradation to glutarate, by acetylation","type":"exact"}],"termid":"GO:0019473"}


id: MONDO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked pure spastic paraplegia (obsolete MONDO:0017912)","secondary_identifiers":["Orphanet:320332"],"termid":"MONDO:0017912","xrefs":{"Monarch":{"xref_id":"0017912"}}}


id: MONDO:0100498
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"}]},"cv_name":"mondo","definition":"Any inherited porphyria in which the cause of the disease is monoallelic or biallelic variants in the UROD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"UROD-related inherited porphyria","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100498","terms_by_termid":{"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0100498"}}}


id: PBO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 26","termid":"PBO:0072251"}


id: PR:P18296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A separin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12792:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.04","secondary_identifiers":["UniProtKB:P18296"],"synonyms":[{"name":"SPCC5E4.04","type":"related"},{"name":"Separase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ESPL1","type":"exact"},{"name":"cell untimely torn protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P18296"}


id: PBO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 17","termid":"PBO:0047383"}


id: PBO:0068581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 32, pseudogene","termid":"PBO:0068581"}


id: MONDO:0100503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder in which the cause of the disease is a mutation in the DPH5 gene, which is characterized by craniofacial dysmorphology, profound neurodevelopmental delay, multisystem abnormalities, and miscarriages.","definition_xrefs":["PMID:35482014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DPH5-related diphthamide-deficiency syndrome","termid":"MONDO:0100503","xrefs":{"Monarch":{"xref_id":"0100503"}}}


id: PBO:0109648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 1 (pseudogene)","termid":"PBO:0109648"}


id: PBO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.3","termid":"PBO:0002524"}


id: GO:0097532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["Wikipedia:Acid","GOC:BHF","GOC:aa","GOC:go_curators","GOC:rl","PMID:10615049","PMID:19170886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to acid chemical","synonyms":[{"name":"response to acid stress","type":"broad"},{"name":"stress response to acid","type":"broad"}],"termid":"GO:0097532"}


id: PBO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 11","termid":"PBO:0046630"}


id: GO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.","definition_xrefs":["GOC:pr","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium","secondary_identifiers":["GO:0030028","NIF_Subcellular:sao1046371754","Wikipedia:Filopodia"],"termid":"GO:0030175"}


id: GO:0034870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,2-dimethyl-3-pentanone + 1/2 O2 = 1-hydroxy-4,4-dimethylpentan-3-one.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pinacolone 5-monooxygenase activity (obsolete GO:0034870)","termid":"GO:0034870"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: PBO:0070172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 86 pseudogene","termid":"PBO:0070172"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_04739","SJAG_01516","SJAG_04112","SJAG_00816","SJAG_00330","SJAG_04770","SJAG_01025","SJAG_03347","SJAG_01276","SJAG_03634","SJAG_03278","SJAG_04548","SJAG_03555","SJAG_04095","SJAG_01633","SJAG_00567","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62048,69927,70282,110860],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[96025,75583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[77395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[76401,78492,98084,71184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[76400,78491,96026,99507,71183],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[69803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[97875,87456,118077,104960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 1","termid":"PBO:0052197"}


id: PBO:0049431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 8","termid":"PBO:0049431"}


id: MONDO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 11b with atopic dermatitis","secondary_identifiers":["DOID:0111958","NCIT:C176630","OMIM:617638","MEDGEN:1627819","UMLS:C4539957"],"synonyms":[{"name":"IMD11B","type":"related"},{"name":"atopic dermatitis, elevated IgE, and eosinophilia","type":"related"},{"name":"immunodeficiency 11B with ATOPIC dermatitis","type":"related"}],"termid":"MONDO:0054697","xrefs":{"Monarch":{"xref_id":"0054697"}}}


id: GO:0102220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dihydrogen + NAD + 2 an oxidized ferredoxin = NADH + 3 H+ + 2 a reduced ferredoxin.","definition_xrefs":["RHEA:30279","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydrogenase activity (NAD+, ferredoxin)","secondary_identifiers":["EC:1.12.1.4","MetaCyc:RXN-12215"],"termid":"GO:0102220"}


id: PBO:0053019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1","termid":"PBO:0053019"}


id: FYPO:0001820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lithium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on lithium","synonyms":[{"name":"normal cell population growth in presence of lithium ions","type":"exact"},{"name":"normal cell population growth on lithium","type":"exact"},{"name":"normal cell population growth on lithium ion","type":"exact"},{"name":"normal cellular response to lithium ion","type":"related"},{"name":"normal growth on lithium ion","type":"exact"},{"name":"normal vegetative cell population growth on lithium ion","type":"exact"}],"termid":"FYPO:0001820"}


id: PBO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 9","termid":"PBO:0072022"}


id: MONDO:0021096
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"is_obsolete":false,"name":"papillary epithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C8429","MEDGEN:235456","UMLS:C1335324"],"synonyms":[{"name":"papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0021096","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0021096"}}}


id: MONDO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete abnormal tissue masses that protrude into the lumen of the intestine. A polyp is attached to the intestinal wall either by a stalk, pedunculus, or by a broad base.","definition_xrefs":["MESH:D007417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal polyp","secondary_identifiers":["MEDGEN:9526","ICD9:569.89","HP:0005266","EFO:0003855","SCTID:254588001","UMLS:C0021846"],"synonyms":[{"name":"intestinal polyp","type":"exact"},{"name":"intestinal polyp (disease)","type":"exact"}],"termid":"MONDO:0005288","xrefs":{"Monarch":{"xref_id":"0005288"}}}


id: PBO:0085156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity; involved in positioning and spacing of nucleosomes over most genes independently of transcription; promotes nucleosome shifts in the 3' direction; has a role in modulating stress gene transcription","termid":"PBO:0085156"}


id: PBO:0069203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 457, pseudogene","termid":"PBO:0069203"}


id: GO:1902890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root hair elongation.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:22329353","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root hair elongation","termid":"GO:1902890"}


id: PBO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3 (predicted)","termid":"PBO:0000704"}


id: PBO:0065082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase and DNA directed polymerase","termid":"PBO:0065082"}


id: MONDO:1011428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, non-human animal","secondary_identifiers":["OMIA:002082"],"termid":"MONDO:1011428","xrefs":{"Monarch":{"xref_id":"1011428"}}}


id: PR:O13753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit d 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01483","PANTHER:PTHR11028:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit d (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.03c","secondary_identifiers":["UniProtKB:O13753"],"synonyms":[{"name":"Spom972h-ATP6V0D1","type":"exact"},{"name":"V-ATPase 39 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit M39 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit d (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit d (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13753"}


id: PBO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 3","termid":"PBO:0072274"}


id: PR:P40236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hhp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.12","synonyms":[{"name":"Spom972h-hhp2","type":"exact"}],"termid":"PR:P40236"}


id: MONDO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory MFH (obsolete MONDO:0003797)","termid":"MONDO:0003797","xrefs":{"Monarch":{"xref_id":"0003797"}}}


id: PBO:0087292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing protein; interacts with Sir2p, Sir4p, and histone H3/H4 tails to establish transcriptionally silent chromatin; required for spreading of silenced chromatin; recruited to chromatin through interaction with Rap1p; C-terminus assumes variant winged helix-turn-helix (wH) fold that mediates homodimerization, which is critical for holo-SIR complex loading; required for telomere hypercluster formation in quiescent yeast cells; has paralog ORC1 from whole genome duplication","termid":"PBO:0087292"}


id: PBO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by different signals","termid":"PBO:0011089"}


id: PBO:0082151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase that converts diacylglycerol to triacylglycerol (TGA); one of several acyltransferases that contribute to TGA synthesis; relocates from ER to nuclear membrane in response cell cycle and starvation signals; Lro1p and Dga1p can O-acylate ceramides; putative homolog of human lecithin cholesterol acyltransferase","termid":"PBO:0082151"}


id: GO:0047412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-(long-chain-acyl)ethanolamine = ethanolamine + a fatty acid.","definition_xrefs":["MetaCyc:3.5.1.60-RXN","EC:3.5.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-(long-chain-acyl)ethanolamine deacylase activity","secondary_identifiers":["RHEA:17505"],"synonyms":[{"name":"N-(long-chain-acyl)ethanolamine amidohydrolase activity","type":"exact"},{"name":"N-acylethanolamine amidohydrolase activity","type":"exact"},{"name":"acylethanolamine amidase activity","type":"exact"}],"termid":"GO:0047412"}


id: GO:2000226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic A cell differentiation","synonyms":[{"name":"regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000226"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_03656","SJAG_00334","SJAG_02102","SJAG_01950","SJAG_04954","SJAG_03764","SJAG_04952","SJAG_00924","SJAG_03056","SJAG_03311","SJAG_00747","SJAG_04821","SJAG_03774","SJAG_00437","SJAG_00394","SJAG_04363"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61442,63324,64301,65402,68914,72994,74927,76668,77077,80082,91093,93868,99784,99992,105016,111099],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["GOC:jl","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation via asparagine","termid":"GO:0018279"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04363":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446193"],"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: RO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_commensalism","termid":"RO:0002466"}


id: GO:1905902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GOC:rph","PMID:23939491","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm formation","termid":"GO:1905902"}


id: PBO:0088444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Sro1 ortholog, syntenic position, intrinsically disordered region","termid":"PBO:0088444"}


id: PBO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 75","termid":"PBO:0048364"}


id: PBO:0081728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 658","termid":"PBO:0081728"}


id: GO:0098719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sodium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sodium ion import across plasma membrane","secondary_identifiers":["GO:1990118","GO:0097369"],"synonyms":[{"name":"sodium import","type":"exact"},{"name":"sodium ion import","type":"related"},{"name":"sodium ion import into cell","type":"exact"}],"termid":"GO:0098719"}


id: GO:0018951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pxy"],"synonyms":[{"name":"p-xylene metabolism","type":"exact"},{"name":"para-xylene metabolic process","type":"exact"},{"name":"para-xylene metabolism","type":"exact"}],"termid":"GO:0018951"}


id: CHEBI:26710
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An inorganic chloride salt having sodium(1+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium chloride","termid":"CHEBI:26710"}


id: PBO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell_during_nitrogen_starvation","termid":"PBO:0030740"}


id: PBO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit gamma","termid":"PBO:0060972"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: PBO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs Four Homologue","termid":"PBO:0000213"}


id: PBO:0065738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 2","termid":"PBO:0065738"}


id: MONDO:0010410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, androgenetic, 2","secondary_identifiers":["MEDGEN:395522","MESH:C567473","OMIM:300710","UMLS:C2678038"],"synonyms":[{"name":"AGA2","type":"exact"},{"name":"alopecia, androgenetic, 2","type":"exact"}],"termid":"MONDO:0010410","xrefs":{"Monarch":{"xref_id":"0010410"}}}


id: PBO:0083465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38","termid":"PBO:0083465"}


id: GO:0097115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:sjp","GOC:BHF","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"presynaptic membrane assembly","termid":"GO:0097105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"neurexin clustering involved in presynaptic membrane assembly","synonyms":[{"name":"Nrxn clustering","type":"broad"},{"name":"neurexin clustering","type":"broad"},{"name":"presynaptic neurexin clustering","type":"exact"}],"termid":"GO:0097115"}


id: PBO:0029547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_degradation_of_DSR-containing_RNA","termid":"PBO:0029547"}


id: PBO:0013053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130","termid":"PBO:0013053"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: SO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 8th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:KE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K8_acetylation_site","synonyms":[{"name":"H4K8 acetylation site","type":"exact"},{"name":"H4K8ac","type":"exact"}],"termid":"SO:0001731"}


id: MONDO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synostosis characterized by the fusion of carpal and tarsal bones, which causes stiffness and immobility of the hands and the feet.","definition_xrefs":["DOID:14762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tarsal-carpal coalition syndrome","termid":"MONDO:0008521"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"calcaneonavicular coalition","secondary_identifiers":["UMLS:C1876184","ICD9:755.8","MESH:C538156","OMIM:186400","MEDGEN:360296","GARD:9863","SCTID:62628008"],"synonyms":[{"name":"calcaneonavicular coalition","type":"exact"},{"name":"multiple synostosis syndrome","type":"exact"},{"name":"synostoses, tarsal, carpal and digital","type":"exact"},{"name":"synostoses, tarsal, carpal, and digital","type":"related"}],"termid":"MONDO:0008518","xrefs":{"Monarch":{"xref_id":"0008518"}}}


id: MONDO:0100328
data:
  {"annotated_genes":["SJAG_05013","SJAG_03670"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031481"},{"annotations":[86534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03670":null,"SJAG_05013":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, epilepsy, and diabetes syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:614231","MEDGEN:481870","UMLS:C3280240"],"termid":"MONDO:0100328","terms_by_termid":{"MONDO:0025690":null,"MONDO:0031481":null},"xrefs":{"Monarch":{"xref_id":"0100328"}}}


id: MOD:01586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and a glycine residue by an ester bond to form O-glycyl-L-threonine.","definition_xrefs":["RESID:AA0496","PubMed:17502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[(aminoacetyl)oxy]butanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Gly-Thr) (interchain with T-...)","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Thr-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-threonine","type":"exact"},{"name":"O3-(2-aminoacetyl)threonine","type":"exact"},{"name":"threonine glycinate ester","type":"exact"}],"termid":"MOD:01586"}


id: GO:0070909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutamate(out) + gamma-aminobutyric acid(in) = glutamate(in) + gamma-aminobutyric acid(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glutamate:gamma-aminobutyric acid antiporter activity","synonyms":[{"name":"glutamate-gamma-aminobutyric acid antiporter activity","type":"exact"},{"name":"glutamate/gamma-aminobutyric acid antiporter activity","type":"exact"},{"name":"glutamate: GABA antiporter activity","type":"exact"}],"termid":"GO:0070909"}


id: PBO:0014275
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homopentameric","termid":"PBO:0014275"}


id: GO:0010782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the proboscis that are derived from the labial disc are generated and organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"labial disc morphogenesis","termid":"GO:0007454"},{"relation_name":"part_of","term_name":"proboscis morphogenesis","termid":"GO:0048734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis morphogenesis, labial disc-derived","termid":"GO:0010782"}


id: GO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates meiotic nuclear division.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100023)","termid":"GO:0100023"}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: MONDO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign cystadenoma that arises from the seminal vesicle.","definition_xrefs":["NCIT:C39907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"seminal vesicle tumor","termid":"MONDO:0002790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle cystadenoma","secondary_identifiers":["MEDGEN:274209","DOID:5724","UMLS:C1519234"],"synonyms":[{"name":"seminal vesicle cystadenoma","type":"exact"}],"termid":"MONDO:0003609","xrefs":{"Monarch":{"xref_id":"0003609"}}}


id: GO:0098031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small disk located at the base of some icosahedral virus capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar","termid":"GO:0098031"}


id: MONDO:0007294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant congenital disorder affecting the skeletal muscles. Microscopically, it is characterized by disorganized areas, which are called cores, seen usually in the center of the muscle fibers. Clinically it presents as mild to severe muscle weakness. It may be associated with skeletal abnormalities including scoliosis, joint deformities, and hip dislocation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"},{"relation_name":"is_a","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"},{"relation_name":"is_a","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"central core myopathy","secondary_identifiers":["MESH:D020512","MEDGEN:1841337","OMIM:117000","UMLS:C5830701","icd11.foundation:2065822840","EFO:1000855","NANDO:1200479","NANDO:2200870","SCTID:43152001","NCIT:C83010","Orphanet:597","DOID:3529","GARD:6014"],"synonyms":[{"name":"CCD","type":"related"},{"name":"Cco","type":"related"},{"name":"Shy-Magee syndrome","type":"related"},{"name":"central CORE disease of muscle","type":"related"},{"name":"central core disease","type":"exact"},{"name":"minicore myopathy, moderate, with hand involvement","type":"related"},{"name":"multicore myopathy, moderate, with hand involvement","type":"related"},{"name":"multiminicore disease, moderate, with hand involvement","type":"related"},{"name":"muscle core disease","type":"related"},{"name":"muscular central core disease","type":"related"},{"name":"myopathy, central core","type":"related"},{"name":"myopathy, central fibrillar","type":"related"},{"name":"neuromuscular disease, congenital, with uniform type 1 Fiber","type":"related"},{"name":"neuromuscular disease, congenital, with uniform type 1 Fibre","type":"related"}],"termid":"MONDO:0007294","xrefs":{"Monarch":{"xref_id":"0007294"}}}


id: PBO:0116855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated RING finger-like protein Ini1","termid":"PBO:0116855"}


id: PBO:0077612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 3","termid":"PBO:0077612"}


id: PBO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036148"}


id: GO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-aconitate = cis-aconitate.","definition_xrefs":["RHEA:17265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"aconitate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.7","KEGG_REACTION:R02244","MetaCyc:ACONITATE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"aconitate D-isomerase activity","type":"exact"},{"name":"aconitate delta2-delta3-isomerase activity","type":"related"},{"name":"aconitate isomerase activity","type":"broad"}],"termid":"GO:0047614"}


id: MONDO:0022401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cortical malformations characterized by no gyri, broad gyri and/or an excessive number of abnormally small gyri that result in an irregular cortical surface with lumpy aspect.","definition_xrefs":["PMID:22333901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agyria pachygyria polymicrogyria","termid":"MONDO:0022401","xrefs":{"Monarch":{"xref_id":"0022401"}}}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: PBO:0053537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 539","termid":"PBO:0053537"}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: PBO:0071500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 3","termid":"PBO:0071500"}


id: FYPO:0000011
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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cellular process phenotype in which a cell does not proceed normally through a cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"cell cycle 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cell-division cycle","type":"exact"},{"name":"cell cycle defects","type":"exact"},{"name":"cell cycle progression: abnormal","type":"related"}],"termid":"FYPO:0000011","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: GO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane on the apical edge of a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"apical cortex","termid":"GO:0045179"}


id: FYPO:0005926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during mitotic G1 phase","synonyms":[{"name":"normal protein accumulation during mitotic G1 phase","type":"related"},{"name":"normal protein level during G1 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005926"}


id: GO:0061108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle epithelium over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle epithelium development","termid":"GO:0061108"}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_00339","SJAG_03334","SJAG_02050","SJAG_00276","SJAG_04406","SJAG_00434","SJAG_00612","SJAG_01177","SJAG_01960","SJAG_04697","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[58935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[93312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[71647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[93314,112277,93081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[88322,75845,74804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[75846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[77586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[77587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0057100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 194-1","termid":"PBO:0057100"}


id: PBO:0089608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1","termid":"PBO:0089608"}


id: SO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that is generally found only in the cytoplasm.","direct_ancestors":[{"relation_name":"has_quality","term_name":"scRNA_encoding","termid":"SO:0000575"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_gene","synonyms":[{"name":"scRNA gene","type":"exact"}],"termid":"SO:0001266"}


id: PBO:0041295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD2 like","termid":"PBO:0041295"}


id: MONDO:0010595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sertoli cell-only syndrome (obsolete MONDO:0010595)","secondary_identifiers":["EFO:1001422"],"termid":"MONDO:0010595","xrefs":{"Monarch":{"xref_id":"0010595"}}}


id: MONDO:0014551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature with nonspecific skeletal abnormalities","secondary_identifiers":["MEDGEN:906874","OMIM:616255","UMLS:C4225399"],"synonyms":[{"name":"SNSK","type":"related"},{"name":"short stature with nonspecific skeletal abnormalities","type":"exact"}],"termid":"MONDO:0014551","xrefs":{"Monarch":{"xref_id":"0014551"}}}


id: PBO:0065927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 1","termid":"PBO:0065927"}


id: MONDO:0008931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cenani-Lenz syndrome (CLS) is a congenital malformation syndrome that associates a complex syndactyly of the hands with malformations of the forearm bones and similar manifestations in the lower limbs.","definition_xrefs":["Orphanet:3258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cenani-Lenz syndactyly syndrome","secondary_identifiers":["MESH:C538150","GARD:5084","OMIM:212780","DOID:0090015","MEDGEN:395226","SCTID:720633009","UMLS:C1859309"],"synonyms":[{"name":"CLSS","type":"related"},{"name":"Cenani syndactylism","type":"related"},{"name":"Cenani syndactyly","type":"exact"},{"name":"Cenani-Lenz syndactyly","type":"exact"},{"name":"Cenani-Lenz syndactyly syndrome","type":"exact"},{"name":"Cenani-Lenz syndrome","type":"related"},{"name":"Cenani-Lenz type syndactyly","type":"related"},{"name":"syndactyly Cenani Lenz type","type":"related"},{"name":"syndactyly type 7","type":"exact"},{"name":"syndactyly, type 7","type":"related"}],"termid":"MONDO:0008931","xrefs":{"Monarch":{"xref_id":"0008931"}}}


id: GO:0030327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein catabolic process","termid":"GO:0019941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"prenylated protein catabolic process","synonyms":[{"name":"prenylated protein breakdown","type":"exact"},{"name":"prenylated protein catabolism","type":"exact"},{"name":"prenylated protein degradation","type":"exact"}],"termid":"GO:0030327"}


id: PBO:0029022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phytochelatin_level","termid":"PBO:0029022"}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: GO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue development","synonyms":[{"name":"atrial myocardium development","type":"exact"}],"termid":"GO:0003228"}


id: PBO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transporter Zhf1","termid":"PBO:0001380"}


id: PBO:0062206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AC member 1 (gene/pseudogene)","termid":"PBO:0062206"}


id: MOD:00040
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to 2-pyrrolidone-5-carboxylic acid.","definition_xrefs":["DeltaMass:123","RESID:AA0031#GLN","OMSSA:110","Unimod:28#Q","PubMed:3473473","PubMed:1836357","PubMed:26343","ChEBI:30652","PubMed:10214721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"2-pyrrolidone-5-carboxylic acid","termid":"MOD:01048"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone-5-carboxylic acid (Gln)","synonyms":[{"name":"(2S)-5-oxo-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"2-oxopyrrolidine-5-carboxylic acid","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid","type":"exact"},{"name":"5-oxoproline","type":"exact"},{"name":"5-oxopyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-pyrrolidone-2-carboxylic acid","type":"exact"},{"name":"Gln->pyro-Glu","type":"related"},{"name":"MOD_RES Pyrrolidone carboxylic acid","type":"exact"},{"name":"N-pyrrolidone carboxyl (N terminus)","type":"exact"},{"name":"PCA","type":"exact"},{"name":"PyrGlu(Gln)","type":"exact"},{"name":"Pyro-glu from Q","type":"related"},{"name":"Pyroglutamic Acid formed from Gln","type":"exact"},{"name":"Pyroglutamyl","type":"exact"},{"name":"ntermpeppyroq","type":"exact"},{"name":"pyroglutamic acid","type":"exact"}],"termid":"MOD:00040"}


id: PBO:0051053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-21","termid":"PBO:0051053"}


id: GO:0097292
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"XMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"XMP metabolism","type":"exact"}],"termid":"GO:0097292","terms_by_termid":{"GO:0032265":null}}


id: PBO:0047108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member A","termid":"PBO:0047108"}


id: GO:0006153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine nucleosidase reaction (obsolete GO:0006153)","synonyms":[{"name":"purine nucleosidase reaction","type":"exact"}],"termid":"GO:0006153"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: MONDO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin D disease(HbD) is a hemoglobinopathy characterized by production of abnormal variant hemoglobin known as hemoglobin D, with no or mild clinical manifestations (splenomegaly, very mild anemia).","definition_xrefs":["Orphanet:90039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin D disease","secondary_identifiers":["DOID:5378","GARD:19103","ICD9:282.7","SCTID:66729008","NCIT:C35344","MedDRA:10055019","MEDGEN:124416","UMLS:C0272080","icd11.foundation:1508363690"],"synonyms":[{"name":"Hb-D disease","type":"exact"},{"name":"hemoglobin D disease","type":"exact"}],"termid":"MONDO:0019537","xrefs":{"Monarch":{"xref_id":"0019537"}}}


id: GO:0045703
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68710],"is_not":false,"summary":null,"term":"GO:0045703"}]},"cv_name":"molecular_function","definition":"Catalysis of the reduction of a ketone group to form the corresponding alcohol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ketoreductase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0045703","terms_by_termid":{"GO:0045703":null}}


id: GO:0034820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3E,1Z)-4,5-9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate + H2O = (2E,4E)-2-hydroxyhexa-2,4-dienoate + 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,9-DSHA hydrolase activity (obsolete GO:0034820)","termid":"GO:0034820"}


id: GO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"chrysobactin metabolic process","termid":"GO:0042857"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"chrysobactin catabolic process","synonyms":[{"name":"chrysobactin breakdown","type":"exact"},{"name":"chrysobactin catabolism","type":"exact"},{"name":"chrysobactin degradation","type":"exact"}],"termid":"GO:0042859"}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: PBO:0030115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_processing","termid":"PBO:0030115"}


id: GO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.8.2.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, cytochrome as acceptor","type":"exact"}],"termid":"GO:0016669"}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: PBO:0028154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_epirubicin","termid":"PBO:0028154"}


id: PR:O42931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23073:SF13","OMA:SCHPO04090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.07c","secondary_identifiers":["UniProtKB:O42931"],"synonyms":[{"name":"Spom972h-PSMC2","type":"exact"}],"termid":"PR:O42931"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: PBO:0079022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 5-1","termid":"PBO:0079022"}


id: MONDO:0020425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal number of coronary ostia","secondary_identifiers":["Orphanet:99089","GARD:19644","MEDGEN:1676211","UMLS:C5191081"],"termid":"MONDO:0020425","xrefs":{"Monarch":{"xref_id":"0020425"}}}


id: PBO:0045996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 3","termid":"PBO:0045996"}


id: GO:0044849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of ovulation cycle, which occurs in most mammalian therian females, where the endometrium is resorbed if pregnancy does not occur.","definition_xrefs":["Wikipedia:Estrous_cycle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrous cycle","termid":"GO:0044849"}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: PBO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 5","termid":"PBO:0045137"}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: MONDO:0008170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ovary. Most primary malignant ovarian neoplasms are either carcinomas (serous, mucinous, or endometrioid adenocarcinomas) or malignant germ cell tumors. Metastatic malignant neoplasms to the ovary include carcinomas, lymphomas, and melanomas.","definition_xrefs":["NCIT:C7431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cancer","secondary_identifiers":["SCTID:363443007","MESH:D010051","GARD:7295","DOID:2394","icd11.foundation:685124533","ICD9:183.0","MEDGEN:216027","OMIM:167000","UMLS:C1140680","Orphanet:213500"],"synonyms":[{"name":"cancer of ovary","type":"exact"},{"name":"cancer of the ovary","type":"exact"},{"name":"malignant neoplasm of ovary","type":"exact"},{"name":"malignant neoplasm of the ovary","type":"exact"},{"name":"malignant ovarian neoplasm","type":"exact"},{"name":"malignant ovarian tumor","type":"exact"},{"name":"malignant ovarian tumour","type":"exact"},{"name":"malignant ovary neoplasm","type":"exact"},{"name":"malignant tumor of ovary","type":"exact"},{"name":"malignant tumor of the ovary","type":"exact"},{"name":"malignant tumour of ovary","type":"exact"},{"name":"malignant tumour of the ovary","type":"exact"},{"name":"ovarian cancer","type":"exact"},{"name":"ovarian cancer, epithelial","type":"related"},{"name":"ovarian cancer, somatic","type":"exact"},{"name":"ovarian malignant tumor","type":"exact"},{"name":"ovarian malignant tumour","type":"exact"},{"name":"ovarian neoplasm","type":"broad"},{"name":"ovary cancer","type":"exact"},{"name":"ovary neoplasm","type":"broad"},{"name":"primary ovarian cancer","type":"related"},{"name":"tumor of the ovary","type":"broad"},{"name":"tumour of the ovary","type":"broad"}],"termid":"MONDO:0008170","xrefs":{"Monarch":{"xref_id":"0008170"}}}


id: PBO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec5","termid":"PBO:0001994"}


id: GO:1902384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycyrrhetinate.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate metabolic process","synonyms":[{"name":"glycyrrhetinate metabolism","type":"exact"}],"termid":"GO:1902384"}


id: GO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:11388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-9759259","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","Reactome:R-HSA-9757706","Wikipedia:11beta-hydroxysteroid_dehydrogenase","EC:1.1.1.146"],"synonyms":[{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0070524"}


id: MONDO:0007808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis hystrix of Curth-Macklin (IHCM) is a rare type of keratinopathic ichthyosis that is characterized by the presence of severe hyperkeratotic lesions and palmoplantar keratoderma (PPK).","definition_xrefs":["Orphanet:79503"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"},{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"},{"relation_name":"is_a","term_name":"ichthyosis hystrix","termid":"MONDO:0859383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis hystrix of Curth-Macklin","secondary_identifiers":["SCTID:254170001","MEDGEN:326700","UMLS:C1840296","NORD:1281","MESH:C536088","GARD:2954","ICD9:757.39","OMIM:146590"],"synonyms":[{"name":"Curth-Macklin type ichthyosis hystrix","type":"exact"},{"name":"IHCM","type":"exact"},{"name":"Ichthyosis Hystrix, Curth Macklin Type","type":"exact"},{"name":"ichthyosis HYSTRIX, Curth-Macklin type","type":"exact"},{"name":"ichthyosis histrix, curth-macklin type","type":"exact"},{"name":"ichthyosis hystrix, Curth Macklin type","type":"exact"},{"name":"ichthyosis hystrix, Curth-Macklin type","type":"exact"}],"termid":"MONDO:0007808","xrefs":{"Monarch":{"xref_id":"0007808"}}}


id: GO:1904503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipophagy.","definition_xrefs":["GOC:dph","PMID:25383539","GOC:autophagy","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"regulation of lipophagy","termid":"GO:1904502"},{"relation_name":"negatively_regulates","term_name":"lipophagy","termid":"GO:0061724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipophagy","synonyms":[{"name":"down regulation of lipophagy","type":"exact"},{"name":"down-regulation of lipophagy","type":"exact"},{"name":"downregulation of lipophagy","type":"exact"},{"name":"inhibition of lipophagy","type":"narrow"}],"termid":"GO:1904503"}


id: MONDO:0012418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 12p13.2-p11.23.","definition_xrefs":["PMID:16650082","DOID:0110514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 62","secondary_identifiers":["UMLS:C1857820","MESH:C565719","GARD:22618","MEDGEN:387916","OMIM:610143"],"synonyms":[{"name":"DFNB62","type":"narrow"},{"name":"autosomal recessive deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 62","type":"narrow"},{"name":"deafness, autosomal recessive 62","type":"narrow"}],"termid":"MONDO:0012418","xrefs":{"Monarch":{"xref_id":"0012418"}}}


id: PBO:0088031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via ubiquitin-26S proteasome system; essential for cellular stress response; encoded as polyubiquitin precursor comprised of 5 head-to-tail repeats; number of repeats is evolutionarily unstable within and between yeast species; protein abundance increases in response to DNA replication stress; implicated as modulator of replicative lifespan","termid":"PBO:0088031"}


id: PBO:0062990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofurin acidic cluster sorting protein 1","termid":"PBO:0062990"}


id: MONDO:0018655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome","termid":"MONDO:0011897"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomyelination-cerebellar atrophy-hypoplasia of the corpus callosum syndrome","secondary_identifiers":["Orphanet:447893","NANDO:1200583","MEDGEN:1842862","NANDO:2201295","UMLS:C5681201","GARD:17773"],"termid":"MONDO:0018655","xrefs":{"Monarch":{"xref_id":"0018655"}}}


id: GO:1903714
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102803,110042],"is_not":false,"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GOC:TermGenie","PMID:18503766","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"isoleucine transport","termid":"GO:0015818"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"isoleucine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903714","terms_by_termid":{"GO:1903714":null}}


id: GO:0009187
data:
  {"annotated_genes":["SJAG_01428","SJAG_02481","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101057],"is_not":false,"summary":null,"term":"GO:0009187"},{"annotations":[116404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[64932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01254":null,"SJAG_01428":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cyclic nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0009187","terms_by_termid":{"GO:0006198":null,"GO:0009187":null,"GO:0009190":null}}


id: MONDO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mansonelliasis (obsolete MONDO:0016585)","termid":"MONDO:0016585","xrefs":{"Monarch":{"xref_id":"0016585"}}}


id: PBO:0031573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_vegetative_cell","termid":"PBO:0031573"}


id: GO:0039593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with the host cell completing the M phase of the cell cycle.","definition_xrefs":["VZ:877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host exit from mitosis","synonyms":[{"name":"inhibition of host mitotic exit by virus","type":"exact"},{"name":"perturbation by virus of host exit from mitosis","type":"narrow"},{"name":"suppression by virus of host exit from mitosis","type":"related"}],"termid":"GO:0039593"}


id: GO:0048641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"}


id: FYPO:0003425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to rapamycin. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to rapamycin","synonyms":[{"name":"abolished protein binding during cellular response to rapamycin","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0003425"}


id: MONDO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potassium-aggravated myotonia (PAM) is a muscular channelopathy presenting with a pure myotonia dramatically aggravated by potassium ingestion, with variable cold sensitivity and no episodic weakness. This group includes three forms: myotonia fluctuans, myotonia permanens, and acetazolamide-responsive myotonia.","definition_xrefs":["Orphanet:612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium-aggravated myotonia","secondary_identifiers":["MEDGEN:444151","NANDO:1200500","UMLS:C2931826","SCTID:702355008","NCIT:C122788","GARD:4459","icd11.foundation:1707250468","OMIM:608390","MESH:C538353"],"synonyms":[{"name":"K+-aggravated myotonia","type":"exact"},{"name":"K-aggravated myotonia","type":"exact"},{"name":"Laryngospasm, Severe Neonatal Episodic","type":"related"},{"name":"MYOTONIA, POTASSIUM-AGGRAVATED","type":"related"},{"name":"Myotonia Congenita, Acetazolamide-Responsive","type":"related"},{"name":"Myotonia Congenita, Atypical","type":"related"},{"name":"Myotonia Fluctuans","type":"related"},{"name":"Myotonia Permanens","type":"related"},{"name":"PAM","type":"exact"},{"name":"Potassium aggravated myotonia","type":"exact"},{"name":"Sodium Channel Muscle Disease","type":"related"},{"name":"myotonia congenita, atypical, acetazolamide-responsive","type":"exact"}],"termid":"MONDO:0018959","xrefs":{"Monarch":{"xref_id":"0018959"}}}


id: GO:0070287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ferritin, and delivering ferritin into the cell via endocytosis.","definition_xrefs":["PMID:17459943","GOC:bf","PMID:19154717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"ferritin receptor activity","synonyms":[{"name":"ferritin complex receptor activity","type":"exact"}],"termid":"GO:0070287"}


id: PBO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33","termid":"PBO:0051153"}


id: MONDO:0016974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm arising from the thymus. It may be associated with myasthenia gravis, pure red cell aplasia, and hypogammaglobulinemia. It includes thymoma type B1 which is a thymoma of low grade malignant potential, thymoma type B2 which is a thymoma of moderate malignancy, and thymoma type B3 which is also known as well differentiated thymic carcinoma.","definition_xrefs":["NCIT:C7114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymoma type B","secondary_identifiers":["UMLS:C1328042","Orphanet:263317","DOID:3282","GARD:20893","ICD10CM:D15.0","MEDGEN:231253"],"synonyms":[{"name":"Dendritic cell thymoma","type":"exact"},{"name":"dendritic cell thymoma","type":"exact"},{"name":"dendritic cell thymoma (disease)","type":"exact"},{"name":"epithelioid thymoma","type":"exact"},{"name":"plump cell thymoma","type":"exact"},{"name":"primary thymic epithelial neoplasm type B","type":"exact"},{"name":"primary thymic epithelial tumor type B","type":"exact"},{"name":"primary thymic epithelial tumour type B","type":"exact"},{"name":"thymoma type B","type":"exact"}],"termid":"MONDO:0016974","xrefs":{"Monarch":{"xref_id":"0016974"}}}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: GO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell negative selection","synonyms":[{"name":"central B lymphocyte negative selection","type":"exact"},{"name":"central B-cell negative selection","type":"exact"},{"name":"central B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002354"}


id: PBO:0086977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease; REG2 has a paralog, REG1, that arose from the whole genome duplication","termid":"PBO:0086977"}


id: PBO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 25","termid":"PBO:0071607"}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: PBO:0086644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the Golgi","termid":"PBO:0086644"}


id: PBO:0073269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 13","termid":"PBO:0073269"}


id: MONDO:0008016
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85640,85641],"is_not":false,"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"trismus-pseudocamptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78540","OMIM:158300","Orphanet:3377","MESH:C535857","DOID:0111603","ICD9:759.89","NORD:1795","SCTID:8757006","UMLS:C0265226","GARD:2621"],"synonyms":[{"name":"DA7","type":"related"},{"name":"Dutch-Kentucky syndrome","type":"exact"},{"name":"Hecht syndrome","type":"exact"},{"name":"Hecht-Beals syndrome","type":"exact"},{"name":"arthrogryposis distal type 7","type":"related"},{"name":"arthrogryposis, distal, type 7","type":"related"},{"name":"distal arthrogryposis type 7","type":"exact"},{"name":"mouth, inability to open completely, and short finger-flexor tendons","type":"related"},{"name":"trismus-pseudocamptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008016","terms_by_termid":{"MONDO:0008016":null},"xrefs":{"Monarch":{"xref_id":"0008016"}}}


id: PR:O74939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl2 gene.","definition_xrefs":["UniProtKB:O74939","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.01c","synonyms":[{"name":"Spom972h-dbl2","type":"exact"}],"termid":"PR:O74939"}


id: MONDO:0850059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin-intellectual disability syndrome","secondary_identifiers":["Orphanet:619233","GARD:22458"],"termid":"MONDO:0850059","xrefs":{"Monarch":{"xref_id":"0850059"}}}


id: FYPO:0006694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during G0","termid":"FYPO:0003871"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K4 trimethylation during G0","synonyms":[{"name":"decreased histone H3 K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during cell quiescence","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during quiescence","type":"exact"},{"name":"decreased histone H3K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3K4me3 during G0","type":"exact"},{"name":"decreased histone lysine H3 K4 trimethylation during G0","type":"exact"},{"name":"reduced histone H3-K4 trimethylation during G0","type":"exact"}],"termid":"FYPO:0006694"}


id: GO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythro-5-hydroxy-L-lysine + GTP = 5-phosphonooxy-L-lysine + GDP + 2 H+.","definition_xrefs":["RHEA:19049","EC:2.7.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hydroxylysine kinase activity","secondary_identifiers":["MetaCyc:HYDROXYLYSINE-KINASE-RXN","Reactome:R-HSA-6788611","KEGG_REACTION:R03378"],"synonyms":[{"name":"GTP:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"guanosine triphosphate:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"hydroxylysine kinase (phosphorylating)","type":"related"}],"termid":"GO:0047992"}


id: MONDO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any degenerative disorder affecting one or more vertebral disks of the cervical spine.","definition_xrefs":["NCIT:C27156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disk degenerative disorder","termid":"MONDO:0011385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical disk degenerative disorder","secondary_identifiers":["MEDGEN:96081","UMLS:C0410606","EFO:0009537","SCTID:69195002"],"synonyms":[{"name":"cervical Disc Degeneration","type":"exact"},{"name":"cervical Disc degenerative disease","type":"exact"},{"name":"cervical Disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disk degenerative disorder","type":"exact"},{"name":"degeneration of cervical intervertebral disc","type":"exact"},{"name":"degeneration of cervical intervertebral disk","type":"exact"},{"name":"intervertebral disc degenerative disorder of cervical region of vertebral column","type":"exact"},{"name":"intervertebral disk degenerative disorder of cervical region of vertebral column","type":"exact"}],"termid":"MONDO:0044343","xrefs":{"Monarch":{"xref_id":"0044343"}}}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: PBO:0069674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 951, pseudogene","termid":"PBO:0069674"}


id: GO:0015476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of hemaglutinin from the periplasm to the external milieu; the hemaglutinin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete hemaglutinin autotransporter activity (obsolete GO:0015476)","termid":"GO:0015476"}


id: MONDO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of actinomycosis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammation of lacrimal passage","termid":"MONDO:0004923"},{"relation_name":"is_a","term_name":"actinomycosis","termid":"MONDO:0005631"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic canaliculitis","secondary_identifiers":["DOID:9936","UMLS:C0155240","SCTID:26479009","MEDGEN:509866","ICD9:375.41"],"synonyms":[{"name":"actinomycosis, chronic","type":"exact"},{"name":"chronic actinomycosis","type":"exact"}],"termid":"MONDO:0004924","xrefs":{"Monarch":{"xref_id":"0004924"}}}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["EC:1.1.1.122","MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: PBO:0056754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 6, methylcytidine","termid":"PBO:0056754"}


id: GO:0060452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"positively_regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle contraction","termid":"GO:0060452"}


id: MONDO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolytic capacity of plasma","secondary_identifiers":["OMIM:176900","UMLS:C1867621","MEDGEN:401269"],"synonyms":[{"name":"proteolytic capacity of plasma","type":"exact"}],"termid":"MONDO:0008317","xrefs":{"Monarch":{"xref_id":"0008317"}}}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: GO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell differentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"reversible differentiation","termid":"GO:0090677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}


id: PBO:0061382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 42","termid":"PBO:0061382"}


id: PBO:0086939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase-activating protein; regulates endocytosis via inactivation of Vps21p at endosomes and vacuole fusion via inactivation of Ypt7p at vacuoles; also acts on Ypt52p and Sec4p; localizes to plasma membrane, sites of polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; similar to TBC-domain Tre2 oncogene; MSB3 has a paralog, MSB4, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null","termid":"PBO:0086939"}


id: PBO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 17, cell surface associated","termid":"PBO:0060196"}


id: MONDO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung parenchyma that is associated with pleurisy, inflammation of the pleura.","definition_xrefs":["MESH:D011001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleurisy","termid":"MONDO:0000986"},{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleuropneumonia","secondary_identifiers":["icd11.foundation:1272236893","UMLS:C0032241","MEDGEN:18524","DOID:14319","SCTID:60485005"],"termid":"MONDO:0001940","xrefs":{"Monarch":{"xref_id":"0001940"}}}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["PO:0006001","GOC:devbiol","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: PBO:0029107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0029107"}


id: PR:O94441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypp1 gene.","definition_xrefs":["UniProtKB:O94441","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein ypp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.04","synonyms":[{"name":"Spom972h-ypp1","type":"exact"}],"termid":"PR:O94441"}


id: GO:0120049
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95161],"is_not":false,"summary":null,"term":"GO:0120049"}]},"cv_name":"biological_process","definition":"The posttranscriptional N6-methylation of an adenine residue in an snRNA molecule.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA (adenine-N6)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120049","terms_by_termid":{"GO:0120049":null}}


id: MONDO:0012581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the P3H1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 8","secondary_identifiers":["DOID:0110336","UMLS:C1970458","MEDGEN:410075","MESH:C536049","OMIM:610915","GARD:10152"],"synonyms":[{"name":"OI type VIII","type":"related"},{"name":"OI, type 8","type":"related"},{"name":"OI8","type":"exact"},{"name":"P3H1 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in P3H1","type":"exact"},{"name":"osteogenesis imperfecta type 8","type":"exact"},{"name":"osteogenesis imperfecta type VIII","type":"exact"},{"name":"osteogenesis imperfecta, type 8","type":"related"},{"name":"osteogenesis imperfecta, type VIII","type":"related"}],"termid":"MONDO:0012581","xrefs":{"Monarch":{"xref_id":"0012581"}}}


id: GO:0102429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: genistin + UDP-alpha-D-glucose = genistin 7-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete genistein-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102429)","termid":"GO:0102429"}


id: MONDO:0005663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurologic syndrome following injury of the spinal sympathetic nerves of the neck. The injury usually results from arthritis or pinching by the adjacent vertebrae. Symptoms include facial pain, chronic allergies, dizziness, neck pain, ear pain and vertigo.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barre-Lieou syndrome","secondary_identifiers":["NCIT:C34411","ICD9:723.2","MESH:D055010","SCTID:17300000","DOID:6692","UMLS:C0376378","MEDGEN:87688","ICD10CM:M53.0"],"synonyms":[{"name":"Cervicocranial syndrome","type":"exact"},{"name":"posterior cervical sympathetic syndrome","type":"exact"}],"termid":"MONDO:0005663","xrefs":{"Monarch":{"xref_id":"0005663"}}}


id: PBO:0053730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 944","termid":"PBO:0053730"}


id: PBO:0036298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg101","termid":"PBO:0036298"}


id: GO:1901592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via break-induced replication.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via break-induced replication","termid":"GO:1901591"},{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair via homologous recombination","termid":"GO:2000042"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via break-induced replication","termid":"GO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via break-induced replication","synonyms":[{"name":"down regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"down-regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"downregulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"inhibition of double-strand break repair via break-induced replication","type":"narrow"}],"termid":"GO:1901592"}


id: GO:0007018
data:
  {"annotated_genes":["SJAG_04745","SJAG_04387","SJAG_02431","SJAG_05266","SJAG_01224","SJAG_05220","SJAG_05185","SJAG_02045","SJAG_02814","SJAG_03683","SJAG_03540","SJAG_00332","SJAG_02561","SJAG_01546","SJAG_01297","SJAG_01613","SJAG_04001","SJAG_01805","SJAG_02848","SJAG_05319","SJAG_01371","SJAG_02737","SJAG_01211","SJAG_04076","SJAG_01662","SJAG_00140","SJAG_00773","SJAG_00930","SJAG_04884","SJAG_00851","SJAG_00918","SJAG_02651","SJAG_02286","SJAG_02336","SJAG_03673","SJAG_03835","SJAG_00042","SJAG_04003","SJAG_02624","SJAG_04597","SJAG_00113","SJAG_02509","SJAG_03437","SJAG_01775","SJAG_00594","SJAG_04143","SJAG_02731","SJAG_03073","SJAG_00397","SJAG_00794","SJAG_02761","SJAG_01370","SJAG_01863","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61339,63896,73671],"is_not":false,"summary":null,"term":"GO:0007018"},{"annotations":[100729,97566,87710,91810,102968,113964,111418,90958,103260,95178,111064,91351,116968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[101436,106602,111241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[100380,102439,95283,109156,118176,99222,115950,93766,118691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[109920,94743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[99228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031534"},{"annotations":[100382,108272,103897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"},{"annotations":[101446],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0062168"},{"annotations":[70542,74874,109624,101447,107443,113966,116972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[97641,99234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[76333,91353,87714,99235,97568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[99236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031535"},{"annotations":[94384],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[103750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[100386,108281,118695,103905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[89097,90946,96759,100522,107519,98623,109907,108902,114117,89702,116942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[116973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[91116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104883,104550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03683":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-based movement","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-983189"],"termid":"GO:0007018","terms_by_termid":{"GO:0000743":null,"GO:0007018":null,"GO:0007079":null,"GO:0010970":null,"GO:0030989":null,"GO:0031534":null,"GO:0031535":null,"GO:0032118":null,"GO:0034643":null,"GO:0047496":null,"GO:0062168":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0099606":null,"GO:0140210":null,"GO:0140405":null,"GO:1902854":null,"GO:1990571":null,"GO:1990976":null}}


id: MONDO:0006112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the bladder. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C6177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"},{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder inflammatory myofibroblastic tumor","secondary_identifiers":["UMLS:C1336891","ONCOTREE:IMTB","EFO:1000127","MEDGEN:237036"],"synonyms":[{"name":"bladder inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"bladder inflammatory myofibroblastic tumor","type":"exact"},{"name":"inflammatory myofibroblastic bladder tumor","type":"related"},{"name":"inflammatory myofibroblastic bladder tumour","type":"related"},{"name":"inflammatory myofibroblastic neoplasm of bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of urinary bladder","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic tumor","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic tumour","type":"exact"}],"termid":"MONDO:0006112","xrefs":{"Monarch":{"xref_id":"0006112"}}}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: PBO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 114","termid":"PBO:0071112"}


id: PR:Q9P7K3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C24B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.02c","synonyms":[{"name":"Spom972h-SPCC24B10.02c","type":"exact"}],"termid":"PR:Q9P7K3"}


id: PBO:0081278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 45","termid":"PBO:0081278"}


id: PBO:0035725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035725"}


id: PBO:0064923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 5 catalytic subunit","termid":"PBO:0064923"}


id: MONDO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"variable-age onset focal epilepsy syndrome","termid":"MONDO:0800492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"sleep-related hypermotor epilepsy","secondary_identifiers":["UMLS:C4313718","OMIMPS:600513","MEDGEN:937685"],"synonyms":[{"name":"SHE","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe","type":"exact"},{"name":"sleep-related hyperkinetic epilepsy","type":"exact"},{"name":"sleep-related hypermotor epilepsy","type":"exact"}],"termid":"MONDO:0000030","xrefs":{"Monarch":{"xref_id":"0000030"}}}


id: PBO:0061278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1","termid":"PBO:0061278"}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["UniProtKB:G2TRN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: PBO:0083979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl hydrolase required for beta-1,6-glucan biosynthesis; type II integral membrane protein that localizes to ER, plasma membrane, sites of polarized growth and secretory vesicles; functionally redundant with Skn1p; KRE6 has a paralog, SKN1, that arose from the whole genome duplication","termid":"PBO:0083979"}


id: GO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle formed of membrane or protein, found in the cytoplasm of a host cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}


id: GO:0080029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of boron-containing substances.","definition_xrefs":["PMID:18952773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to boron-containing substance","termid":"GO:0010036"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to boron-containing substance levels","synonyms":[{"name":"cellular response to boron levels","type":"exact"}],"termid":"GO:0080029"}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-21","termid":"PBO:0051437"}


id: MONDO:0020179
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A melanocytic nevus that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"benign tumor of palpebral epidermis","termid":"MONDO:0020173"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"palpebral nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:231827008","UMLS:C0239460","MEDGEN:65985","NCIT:C3880","Orphanet:98588"],"synonyms":[{"name":"eyelid nevus","type":"exact"},{"name":"melanocytic nevus of skin of eyelid","type":"exact"},{"name":"nevus of eyelid","type":"exact"},{"name":"nevus of the eyelid","type":"exact"},{"name":"skin of eyelid melanocytic nevus","type":"exact"}],"termid":"MONDO:0020179","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020179"}}}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific phosphoprotein","termid":"PBO:0017052"}


id: GO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein catabolic process","synonyms":[{"name":"lutein breakdown","type":"exact"},{"name":"lutein catabolism","type":"exact"},{"name":"lutein degradation","type":"exact"}],"termid":"GO:0062172"}


id: GO:1905240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["PMID:19342382","GOC:BHF_miRNA","GOC:rph","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905240)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905240"}


id: PBO:0016069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type","termid":"PBO:0016069"}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:kmv","PMID:26554819","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: MONDO:1010952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Embryonal rhabdomyosarcoma that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma, non-human animal","termid":"MONDO:1010216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal rhabdomyosarcoma, cattle","secondary_identifiers":["OMIA:001921-9913"],"termid":"MONDO:1010952","xrefs":{"Monarch":{"xref_id":"1010952"}}}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: PBO:0077860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 1","termid":"PBO:0077860"}


id: GO:0100066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates induction of conjugation with cellular fusion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100066)","termid":"GO:0100066"}


id: PBO:0075749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: GO:0030091
data:
  {"annotated_genes":["SJAG_00365","SJAG_00419","SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65383,95538,113482],"is_not":false,"summary":null,"term":"GO:0030091"}]},"cv_name":"biological_process","definition":"The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676934"],"termid":"GO:0030091","terms_by_termid":{"GO:0030091":null}}


id: PBO:0073394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 9","termid":"PBO:0073394"}


id: _global:has_regulation_target
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulation_target","secondary_identifiers":["GOREL:0000015"],"synonyms":[{"name":"regulates","type":"broad"}],"termid":"_global:has_regulation_target"}


id: GO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-cysteine metabolic process","synonyms":[{"name":"D-cysteine metabolism","type":"exact"}],"termid":"GO:0046438"}


id: MONDO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of spina bifida, characterized by any of several neural tube defects which may go undetected until an x-ray is performed. Treatment is symptomatic.","definition_xrefs":["NCIT:C101044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida","termid":"MONDO:0008449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida occulta","secondary_identifiers":["DOID:0080073","GARD:10787","ICD9:756.17","UMLS:C0080174","SCTID:76916001","MEDGEN:36380","icd11.foundation:449489594","Orphanet:645202","HP:0003298","MESH:D016136"],"synonyms":[{"name":"closed spinal dysraphism","type":"exact"},{"name":"spina bifida occulta","type":"exact"},{"name":"spina bifida occulta (disease)","type":"exact"}],"termid":"MONDO:0000859","xrefs":{"Monarch":{"xref_id":"0000859"}}}


id: PBO:0084649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor CTP synthase isozyme (see also URA7); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA8 has a paralog, URA7, that arose from the whole genome duplication","termid":"PBO:0084649"}


id: GO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of transcription as a part of the process of egg activation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in egg activation (obsolete GO:0060469)","synonyms":[{"name":"activation of the egg genome","type":"related"},{"name":"activation of the maternal genome","type":"related"}],"termid":"GO:0060469"}


id: PBO:0064540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 1, pseudogene","termid":"PBO:0064540"}


id: GO:2001127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a formic acid.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}


id: GO:0072738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to diamide","termid":"GO:0072737"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diamide","synonyms":[{"name":"cellular response to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"GO:0072738"}


id: MOD:01627
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cysteinyl-L-selenocysteine either by the natural process of cross-linking an L-cysteine residue and an L-selenocysteine residue, or by the hypothetical process of substituting a selenium for a sulfur atom in cystine.","definition_xrefs":["PubMed:12911312","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}


id: PBO:0066401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 gamma","termid":"PBO:0066401"}


id: PBO:0063837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phosphohydroxy-L-lysine phospho-lyase","termid":"PBO:0063837"}


id: GO:0102590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-rutinoside + 1-O-4-hydroxybenzoyl-beta-D-glucose = delphinidin 3-O-rutinoside-7-O-glucoside + 4-hydroxybenzoic acid + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-rutinoside 7-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102590)","termid":"GO:0102590"}


id: PBO:0034747
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-translationally cleaved tandem fusion","termid":"PBO:0034747"}


id: PBO:0058978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutL homolog 3","termid":"PBO:0058978"}


id: GO:0150087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from the same dendrite.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22028887","PMID:11248111","PMID:24487234","PMID:10586883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting single dendrite","synonyms":[{"name":"MSB1","type":"exact"},{"name":"type 1 multi-synapse bouton","type":"exact"},{"name":"type 1 multi-synaptic bouton","type":"exact"},{"name":"type 1 multiple spine synapse bouton","type":"exact"},{"name":"type 1 multiple-synapse bouton","type":"exact"},{"name":"type 1 multisynapse bouton","type":"exact"},{"name":"type 1 multisynaptic bouton","type":"exact"}],"termid":"GO:0150087"}


id: MONDO:0006877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the ovary, generally caused by an ascending infection of organisms from the endocervix.","definition_xrefs":["MESH:D009869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oophoritis","secondary_identifiers":["MedDRA:10030345","UMLS:C0029051","DOID:10974","MEDGEN:14486","SCTID:76047005","EFO:1001071"],"synonyms":[{"name":"inflammation of ovary","type":"exact"},{"name":"ovary inflammation","type":"exact"}],"termid":"MONDO:0006877","xrefs":{"Monarch":{"xref_id":"0006877"}}}


id: GO:0140108
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114197],"is_not":false,"summary":null,"term":"GO:0140108"}]},"cv_name":"molecular_function","definition":"Enables the transfer of D-glucose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:25411338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose transmembrane transporter activity","type":"exact"}],"termid":"GO:0140108","terms_by_termid":{"GO:0140108":null}}


id: MONDO:0005800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, localized swelling of the eyelid that may be external or internal and usually is a pyogenic (typically staphylococcal) infection or abscess.","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"hordeolum","secondary_identifiers":["UMLS:C0019917","MEDGEN:6884","icd11.foundation:1259721857","NCIT:C118722","DOID:9909","MESH:D006726","SCTID:397513003"],"synonyms":[{"name":"Stye","type":"exact"},{"name":"blepharitis of eyelid gland","type":"exact"},{"name":"boil of eyelid","type":"exact"},{"name":"eyelid gland blepharitis","type":"exact"},{"name":"furuncle of eyelid","type":"exact"}],"termid":"MONDO:0005800","xrefs":{"Monarch":{"xref_id":"0005800"}}}


id: PATO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenous","termid":"PATO:0002462"}


id: GO:0036480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron. The pathway is induced in response to oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:23858059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"},{"relation_name":"part_of","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","synonyms":[{"name":"neuron apoptosis in response to oxidative stress","type":"related"},{"name":"oxidative stress-induced neuron apoptosis","type":"broad"},{"name":"oxidative stress-induced neuronal apoptosis","type":"broad"}],"termid":"GO:0036480"}


id: PBO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase","termid":"PBO:0012279"}


id: FYPO:0002185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and tapered cells (obsolete FYPO:0002185)","synonyms":[{"name":"inviable mixed population including germinated spores and bottle/skittle cells","type":"related"},{"name":"inviable mixed population including germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002185"}


id: MONDO:0014313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity","secondary_identifiers":["GARD:17732","DOID:0111941","UMLS:C3810342","Orphanet:437552","OMIM:615707","MEDGEN:816672"],"synonyms":[{"name":"CD16 deficiency","type":"exact"},{"name":"IMD20","type":"related"},{"name":"autosomal recessive primary immunodeficiency with defective spontaneous NK cell cytotoxicity","type":"exact"},{"name":"immunodeficiency 20","type":"related"},{"name":"immunodeficiency type 20","type":"exact"}],"termid":"MONDO:0014313","xrefs":{"Monarch":{"xref_id":"0014313"}}}


id: PBO:0080699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 5A","termid":"PBO:0080699"}


id: PBO:0005039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar H+-ATPase assembly protein Vma21 (predicted)","termid":"PBO:0005039"}


id: PBO:0055425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2855","termid":"PBO:0055425"}


id: GO:0061866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of one or more phosphate groups to histone H3 on a serine residue at position 10.","definition_xrefs":["PMID:27521428"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-S10 phosphorylation (obsolete GO:0061866)","termid":"GO:0061866"}


id: PBO:0039434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK3 divergent transcript","termid":"PBO:0039434"}


id: PATO:0000448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000448 high percentage (obsolete PATO:0000448)","termid":"PATO:0000448"}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: PR:Q10234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp5 gene.","definition_xrefs":["UniProtKB:Q10234","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.17c","synonyms":[{"name":"Spom972h-mrp5","type":"exact"}],"termid":"PR:Q10234"}


id: FYPO:0004541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at centromere","termid":"FYPO:0005071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at centromere inner repeat","synonyms":[{"name":"increased chromatin silencing at centromere imr","type":"exact"},{"name":"increased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"increased heterochromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0004541"}


id: GO:1900220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that contributes to bone trabecula morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis","synonyms":[{"name":"semaphorin-plexin signaling pathway of bone trabecula morphogenesis","type":"exact"},{"name":"semaphorin-plexin signalling pathway of bone trabecula morphogenesis","type":"exact"}],"termid":"GO:1900220"}


id: MONDO:0020037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare female reproductive system neoplasm.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare gynecological tumor (obsolete MONDO:0020037)","secondary_identifiers":["Orphanet:98063"],"synonyms":[{"name":"rare female reproductive system neoplasm","type":"exact"},{"name":"rare gynecological cancer","type":"exact"},{"name":"rare gynecological neoplasm","type":"exact"}],"termid":"MONDO:0020037","xrefs":{"Monarch":{"xref_id":"0020037"}}}


id: MONDO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal intraductal papillomatosis","secondary_identifiers":["NCIT:C7365","UMLS:C1333626","DOID:7512","MEDGEN:272635"],"synonyms":[{"name":"focal intraductal papillomatosis","type":"exact"},{"name":"localised intraductal papillomatosis","type":"related"},{"name":"localized intraductal papillomatosis","type":"related"}],"termid":"MONDO:0004254","xrefs":{"Monarch":{"xref_id":"0004254"}}}


id: GO:2000797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"}


id: PBO:0086776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086776"}


id: MONDO:0957807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE syndrome 6, autosomal dominant, with recurrent infections","secondary_identifiers":["UMLS:C5848786","OMIM:620532","MEDGEN:1851769"],"termid":"MONDO:0957807","xrefs":{"Monarch":{"xref_id":"0957807"}}}


id: GO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"positive regulation of peptide secretion","termid":"GO:0002793"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide secretion","synonyms":[{"name":"activation of antimicrobial peptide secretion","type":"narrow"},{"name":"stimulation of antimicrobial peptide secretion","type":"narrow"},{"name":"up regulation of antimicrobial peptide secretion","type":"exact"},{"name":"up-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"upregulation of antimicrobial peptide secretion","type":"exact"}],"termid":"GO:0002796"}


id: PBO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine salvage protein","termid":"PBO:0016056"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0041764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 3","termid":"PBO:0041764"}


id: MONDO:0032848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 65, susceptibility to viral infections","secondary_identifiers":["UMLS:C5231441","DOID:0111978","MEDGEN:1684865","OMIM:618648"],"synonyms":[{"name":"IMD65","type":"related"},{"name":"IMMUNODEFICIENCY 65, SUSCEPTIBILITY TO VIRAL INFECTIONS","type":"related"}],"termid":"MONDO:0032848","xrefs":{"Monarch":{"xref_id":"0032848"}}}


id: FYPO:0002654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which exocytic vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"enlarged exocytic vesicles","synonyms":[{"name":"enlarged exocytic vesicles during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0002654"}


id: PBO:0088563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2433 metallo phosphatase superfamily conserved fungal protein","termid":"PBO:0088563"}


id: MONDO:0017318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis pigmentovascularis","secondary_identifiers":["MESH:C537894","icd11.foundation:1768130414","GARD:4312","ICD9:709.09","Orphanet:2875","MEDGEN:220888","UMLS:C1274879","SCTID:403545005"],"synonyms":[{"name":"PPv","type":"related"},{"name":"Phacomatosis pigmentovascularis","type":"related"},{"name":"association of cutaneous vascular malformations and different pigmentary disorders","type":"related"},{"name":"phakomatosis pigmentovascularis","type":"exact"},{"name":"port-wine stain with oculocutaneous melanosis","type":"exact"}],"termid":"MONDO:0017318","xrefs":{"Monarch":{"xref_id":"0017318"}}}


id: GO:0035495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SNARE complex disassembly","termid":"GO:0035495"}


id: MOD:00349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form 4-amino-3-isothiazolidinone-L-serine.","definition_xrefs":["PubMed:12802338","PubMed:12802339","RESID:AA0344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-serine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-hydroxypropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-hydroxy-propanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-serine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)serine (Cys-Ser)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-serine","type":"exact"},{"name":"serine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"serine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:00349"}


id: PBO:0075980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5A","termid":"PBO:0075980"}


id: GO:1904589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11406629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import","termid":"GO:0017038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein import","synonyms":[{"name":"regulation of protein uptake","type":"exact"}],"termid":"GO:1904589"}


id: PBO:0028056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_cell","termid":"PBO:0028056"}


id: PR:000085734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Phos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Ser-11, MOD:00046","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Ser-11, MOD:00046","type":"exact"},{"name":"hht3/Phos(S10)","type":"exact"}],"termid":"PR:000085734"}


id: PBO:0027594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027594"}


id: SO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A right handed helix is a region of peptide where the coiled conformation turns in a clockwise, right handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"right_handed_peptide_helix","secondary_identifiers":["BS:0000339"],"synonyms":[{"name":"helix","type":"related"},{"name":"right handed helix","type":"exact"}],"termid":"SO:0001116"}


id: GO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule atrial natriuretic peptide.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial natriuretic peptide","synonyms":[{"name":"blood pressure regulation by ANP","type":"related"},{"name":"blood pressure regulation by atrial natriuretic peptide","type":"exact"}],"termid":"GO:0003050"}


id: PBO:0073683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 5","termid":"PBO:0073683"}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_03651","SJAG_00439","SJAG_02044","SJAG_02591","SJAG_00615","SJAG_01022","SJAG_03219","SJAG_02162","SJAG_02822","SJAG_02651","SJAG_00341","SJAG_00192"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73903,80127,88515,95513,98449,102871],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[97759,90564,94318,109090,104874,110334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: MONDO:0006744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of endolymph in the inner ear (labyrinth) leading to buildup of pressure and distortion of intralabyrinthine structures, such as cochlea and semicircular canals. It is characterized by sensorineural hearing loss; tinnitus; and sometimes vertigo.","definition_xrefs":["MESH:D018159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endolymphatic hydrops","secondary_identifiers":["EFO:1000918","ICD9:386.8","MEDGEN:60183","DOID:9848","SCTID:27621000119100","UMLS:C0206586","MedDRA:10049934"],"synonyms":[{"name":"labyrinthine hydrops","type":"exact"}],"termid":"MONDO:0006744","xrefs":{"Monarch":{"xref_id":"0006744"}}}


id: MONDO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant cystic nephroma (obsolete MONDO:0004284)","termid":"MONDO:0004284","xrefs":{"Monarch":{"xref_id":"0004284"}}}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["EC:4.1.99.11","RHEA:10416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["KEGG_REACTION:R05598","UM-BBD_enzymeID:r0328","MetaCyc:RXN-863"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: GO:0044440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an endosome, a membrane-bounded organelle to which materials ingested by endocytosis are delivered.","definition_xrefs":["GOC:mah","PMID:19696797"],"gene_count":0,"genotype_count":0,"name":"obsolete endosomal part (obsolete GO:0044440)","synonyms":[{"name":"endosomal subcomponent","type":"exact"},{"name":"endosome component","type":"exact"}],"termid":"GO:0044440"}


id: PR:Q9Y7Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas4 gene.","definition_xrefs":["UniProtKB:Q9Y7Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.03","synonyms":[{"name":"Spom972h-gas4","type":"exact"}],"termid":"PR:Q9Y7Y7"}


id: MONDO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stuve-Wiedemann syndrome","termid":"MONDO:0031280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stuve-Wiedemann syndrome 2","secondary_identifiers":["MEDGEN:1805977","OMIM:619751","UMLS:C5676919"],"synonyms":[{"name":"STWS2","type":"exact"},{"name":"Stuve-Wiedemann syndrome 2","type":"exact"}],"termid":"MONDO:0030756","xrefs":{"Monarch":{"xref_id":"0030756"}}}


id: PBO:0027334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_chromatin_binding","termid":"PBO:0027334"}


id: MONDO:0024656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the colon or rectum. The majority are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C96498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal lymphoma","secondary_identifiers":["MEDGEN:474455","UMLS:C3272822"],"synonyms":[{"name":"colorectal lymphoma","type":"exact"},{"name":"large intestinal lymphoma","type":"exact"},{"name":"large intestine lymphoma","type":"exact"},{"name":"lymphoma of large intestine","type":"exact"},{"name":"primary colorectal lymphoma","type":"exact"}],"termid":"MONDO:0024656","xrefs":{"Monarch":{"xref_id":"0024656"}}}


id: GO:1905723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18949025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"negatively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of trypanothione biosynthetic process","synonyms":[{"name":"down regulation of trypanothione anabolism","type":"exact"},{"name":"down regulation of trypanothione biosynthesis","type":"exact"},{"name":"down regulation of trypanothione biosynthetic process","type":"exact"},{"name":"down regulation of trypanothione formation","type":"exact"},{"name":"down regulation of trypanothione synthesis","type":"exact"},{"name":"down-regulation of trypanothione anabolism","type":"exact"},{"name":"down-regulation of trypanothione biosynthesis","type":"exact"},{"name":"down-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"down-regulation of trypanothione formation","type":"exact"},{"name":"down-regulation of trypanothione synthesis","type":"exact"},{"name":"downregulation of trypanothione anabolism","type":"exact"},{"name":"downregulation of trypanothione biosynthesis","type":"exact"},{"name":"downregulation of trypanothione biosynthetic process","type":"exact"},{"name":"downregulation of trypanothione formation","type":"exact"},{"name":"downregulation of trypanothione synthesis","type":"exact"},{"name":"inhibition of trypanothione anabolism","type":"narrow"},{"name":"inhibition of trypanothione biosynthesis","type":"narrow"},{"name":"inhibition of trypanothione biosynthetic process","type":"narrow"},{"name":"inhibition of trypanothione formation","type":"narrow"},{"name":"inhibition of trypanothione synthesis","type":"narrow"},{"name":"negative regulation of trypanothione anabolism","type":"exact"},{"name":"negative regulation of trypanothione biosynthesis","type":"exact"},{"name":"negative regulation of trypanothione formation","type":"exact"},{"name":"negative regulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905723"}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: PBO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah2 (predicted)","termid":"PBO:0002490"}


id: MONDO:0020411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aorto-ventricular tunnel","termid":"MONDO:0018082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-left ventricular tunnel","secondary_identifiers":["GARD:19633","icd11.foundation:1781288740","Orphanet:99071","MEDGEN:576719","UMLS:C0345054"],"termid":"MONDO:0020411","xrefs":{"Monarch":{"xref_id":"0020411"}}}


id: PBO:0058142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4438","termid":"PBO:0058142"}


id: MONDO:0859203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic dysplasia, Ain-Naz type","secondary_identifiers":["MEDGEN:1794223","OMIM:619598","UMLS:C5562013"],"termid":"MONDO:0859203","xrefs":{"Monarch":{"xref_id":"0859203"}}}


id: GO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CAP-Gly domain of a protein. The CAP_Gly domain is a conserved, glycine-rich domain of about 42 residues found in some cytoskeleton-associated proteins, and features a novel protein fold containing three beta-sheets.","definition_xrefs":["GOC:mah","InterPro:IPR000938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CAP-Gly domain binding","termid":"GO:0071794"}


id: PBO:0067376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 478, pseudogene","termid":"PBO:0067376"}


id: MONDO:0000469
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"A disease involving the sinoatrial node.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"conduction system disorder","termid":"MONDO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sinoatrial node disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:98448","DOID:0050824","UMLS:C0428908"],"synonyms":[{"name":"SA node","type":"related"},{"name":"disease of sinoatrial node","type":"exact"},{"name":"disease or disorder of sinoatrial node","type":"exact"},{"name":"disorder of sinoatrial node","type":"exact"},{"name":"sinoatrial node disease","type":"exact"},{"name":"sinoatrial node disease or disorder","type":"exact"},{"name":"sinuatrial node","type":"related"}],"termid":"MONDO:0000469","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0000469"}}}


id: MOD:01530
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01530"}


id: GO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of triacylglycerol, through sequential deacylation and re-acylation reactions, to generate triacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride acyl-chain remodeling","synonyms":[{"name":"triacylglycerol acyl-chain remodeling","type":"exact"},{"name":"triglyceride acyl-chain remodelling","type":"exact"}],"termid":"GO:0036153"}


id: PBO:0109371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6","termid":"PBO:0109371"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87251,87252],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830272","MEDGEN:1840908","OMIM:620241"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: MONDO:0016719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-seizures-intellectual disability-heart disease syndrome is characterized by intellectual deficit, a cardiac anomaly, micropenis, hypothyroidism, epileptic seizures, and skeletal anomalies. It has been described in two males.","definition_xrefs":["Orphanet:2519"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-seizures-intellectual disability-heart disease syndrome","secondary_identifiers":["UMLS:C2931529","MEDGEN:419830","GARD:18774","MESH:C537544"],"synonyms":[{"name":"microcephaly seizures intellectual disability heart disorders","type":"related"},{"name":"microcephaly seizures mental retardation heart disorders","type":"related"},{"name":"microcephaly, seizures, intellectual disability, congenital heart disease, and skeletal abnormalities","type":"related"},{"name":"microcephaly, seizures, mental retardation, congenital heart disease, and skeletal abnormalities","type":"related"}],"termid":"MONDO:0016719","xrefs":{"Monarch":{"xref_id":"0016719"}}}


id: GO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves chromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin maintenance (obsolete GO:0070827)","termid":"GO:0070827"}


id: PBO:0056088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly1 antibody reactive","termid":"PBO:0056088"}


id: GO:0102594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3,7-di-O-beta-D-glucoside betaine + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3-O-glucoside-7-O-(6-O-(p-hydroxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 7-O-glucoside acyltransferase(acyl-glucose dependent) activity (obsolete GO:0102594)","termid":"GO:0102594"}


id: PBO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A pseudogene 1","termid":"PBO:0070441"}


id: MONDO:1012202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, dog","secondary_identifiers":["OMIA:000753-9615"],"termid":"MONDO:1012202","xrefs":{"Monarch":{"xref_id":"1012202"}}}


id: GO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A DNA binding activity in which a protein complex interacts selectively and non-covalently with single DNA duplex to tightly encircle the DNA.","definition_xrefs":["GOC:vw","PMID:1349852","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA clamp activity (obsolete GO:0061777)","termid":"GO:0061777"}


id: MONDO:0017109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cerebellar vermis agenesis","termid":"MONDO:0017107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated partial cerebellar vermis agenesis","secondary_identifiers":["GARD:20992","MEDGEN:1842645","UMLS:C5680780","Orphanet:269209"],"termid":"MONDO:0017109","xrefs":{"Monarch":{"xref_id":"0017109"}}}


id: PBO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L","termid":"PBO:0046069"}


id: MONDO:0011093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive lysosomal storage disease caused by mutation(s) in the HYAL1 gene, encoding hyaluronidase-1. It is characterized by short stature and hyaluronidase deficiency.","definition_xrefs":["NCIT:C129073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 9","secondary_identifiers":["GARD:16675","Orphanet:67041","MESH:C563209","ICD9:277.6","SCTID:124473006","UMLS:C1291490","icd11.foundation:952591271","DOID:0050809","NANDO:1200115","OMIM:601492","MEDGEN:226942"],"synonyms":[{"name":"MPS 9","type":"related"},{"name":"MPS9","type":"exact"},{"name":"MPSIX","type":"exact"},{"name":"hyaluronidase deficiency","type":"related"},{"name":"mucopolysaccharidosis IX","type":"related"},{"name":"mucopolysaccharidosis type 9","type":"exact"},{"name":"mucopolysaccharidosis type IX","type":"exact"},{"name":"mucopolysaccharidosis, type 9","type":"related"},{"name":"mucopolysaccharidosis, type IX","type":"related"}],"termid":"MONDO:0011093","xrefs":{"Monarch":{"xref_id":"0011093"}}}


id: MONDO:0010788
data:
  {"annotated_genes":["SJAG_MIT03","SJAG_MIT13","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85510,85511,85512],"is_not":false,"summary":null,"term":"MONDO:0010788"}]},"cv_name":"mondo","definition":"Leber's hereditary optic neuropathy (LHON) is a mitochondrial neurodegenerative disease affecting the optic nerve and often characterized by sudden vision loss in young adult carriers.","definition_xrefs":["Orphanet:104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005267","MONDO:0004069","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:705","NANDO:1200178","NCIT:C84808","MEDGEN:182973","OMIM:535000","MESH:D029242","GARD:6870","icd11.foundation:1018428959","NORD:1352","UMLS:C0917796","SCTID:58610003","NANDO:1200940"],"synonyms":[{"name":"LHON","type":"exact"},{"name":"Leber Hereditary optic atrophy","type":"exact"},{"name":"Leber hereditary optic neuropathy","type":"exact"},{"name":"Leber optic atrophy","type":"exact"},{"name":"Leber's hereditary optic neuropathy","type":"exact"},{"name":"Leber's optic atrophy","type":"exact"},{"name":"Leber’s disease","type":"related"},{"name":"optic atrophy, Leber type","type":"related"}],"termid":"MONDO:0010788","terms_by_termid":{"MONDO:0010788":null},"xrefs":{"Monarch":{"xref_id":"0010788"}}}


id: MONDO:0957832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal osteosclerosis with hip dysplasia","secondary_identifiers":["MEDGEN:1844026","OMIM:620558","UMLS:C5882710"],"termid":"MONDO:0957832","xrefs":{"Monarch":{"xref_id":"0957832"}}}


id: MONDO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare mucosal lichen planus (obsolete MONDO:0016768)","secondary_identifiers":["ICD10CM:L43.1","Orphanet:254373"],"synonyms":[{"name":"rare mucosal LP","type":"exact"}],"termid":"MONDO:0016768","xrefs":{"Monarch":{"xref_id":"0016768"}}}


id: MONDO:0012683
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85278],"is_not":false,"summary":null,"term":"MONDO:0012683"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 6 (PCH6) is a rare form of pontocerebellar hypoplasia characterized clinically at birth by hypotonia, clonus, epilepsy impaired swallowing and from infancy by progressive microencephaly, spasticity and lactic acidosis.","definition_xrefs":["Orphanet:166073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060275","SCTID:718606005","MEDGEN:370596","OMIM:611523","MESH:C548074","GARD:10710","UMLS:C1969084","icd11.foundation:1612653027"],"synonyms":[{"name":"PCH6","type":"exact"},{"name":"RARS2 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"encephalopathy fatal infantile with mitochondrial respiratory chain defects","type":"related"},{"name":"encephalopathy, fatal infantile, with mitochondrial respiratory chain defects","type":"related"},{"name":"fatal infantile encephalopathy with mitochondrial respiratory chain defects","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in RARS2","type":"exact"},{"name":"pontocerebellar hypoplasia type 6","type":"exact"},{"name":"pontocerebellar hypoplasia, type 6","type":"related"}],"termid":"MONDO:0012683","terms_by_termid":{"MONDO:0012683":null},"xrefs":{"Monarch":{"xref_id":"0012683"}}}


id: PBO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Pmk1","termid":"PBO:0003311"}


id: GO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["PMID:9550723","GOC:mtg_sensu","CL:0000387","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte differentiation","synonyms":[{"name":"arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0042386"}


id: PBO:0050870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 antisense RNA 1","termid":"PBO:0050870"}


id: PR:O14190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00502","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.02c","secondary_identifiers":["UniProtKB:O14190"],"synonyms":[{"name":"Spom972h-ALG13","type":"exact"},{"name":"asparagine-linked glycosylation protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14190"}


id: GO:0098019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the viral tail that comprises the most common subunit type.","definition_xrefs":["GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete virus tail, major subunit (obsolete GO:0098019)","synonyms":[{"name":"major tail protein","type":"related"}],"termid":"GO:0098019"}


id: MONDO:0009314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete GTP-cyclohydrolase I deficiency (obsolete MONDO:0009314)","termid":"MONDO:0009314","xrefs":{"Monarch":{"xref_id":"0009314"}}}


id: MONDO:0958342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect during embryogenesis characterized by congenital absence of the optic nerve head, optic nerve fibers, retinal ganglion cells, and retinal blood vessels in a malformed eye. It often occurs unilaterally with otherwise normal brain development. In bilateral cases it is accompanied by other central nervous system malformations.","definition_xrefs":["Orphanet:637064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated optic nerve aplasia","secondary_identifiers":["MEDGEN:1836872","UMLS:C5816782"],"termid":"MONDO:0958342","xrefs":{"Monarch":{"xref_id":"0958342"}}}


id: FYPO:0007215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more lncRNA genes is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at lncRNA gene","synonyms":[{"name":"abolished protein localisation to chromatin at lncRNA gene during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at lncRNA gene during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at long non-coding RNA gene","type":"exact"},{"name":"protein localization to chromatin at lncRNA gene abolished","type":"exact"}],"termid":"FYPO:0007215"}


id: PBO:0066871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 171","termid":"PBO:0066871"}


id: MONDO:0019985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular dysgenesis","termid":"MONDO:0017609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"drug-related renal tubular dysgenesis","secondary_identifiers":["GARD:19378","MEDGEN:1771212","UMLS:C5438798","Orphanet:97368"],"termid":"MONDO:0019985","xrefs":{"Monarch":{"xref_id":"0019985"}}}


id: MONDO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast ductal carcinoma (obsolete MONDO:0002484)","termid":"MONDO:0002484","xrefs":{"Monarch":{"xref_id":"0002484"}}}


id: PBO:0028701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis","termid":"PBO:0028701"}


id: PBO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc5","termid":"PBO:0002038"}


id: GO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-aminoadipate + acetyl-CoA = N2-acetyl-alpha-aminoadipate + coenzyme A.","definition_xrefs":["PMID:10613839","PMID:12925802","PMID:29053735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-aminoadipate acetyltransferase activity","secondary_identifiers":["GO:0043869","MetaCyc:RXN-5181"],"synonyms":[{"name":"L-2-aminoadipate N-acetyltransferase activity","type":"related"}],"termid":"GO:0043741"}


id: PBO:0076593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 14","termid":"PBO:0076593"}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: GO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of tubovesicular network for nutrient acquisition","synonyms":[{"name":"formation by symbiont of a tubovesicular network for nutrient acquisition from host","type":"related"},{"name":"formation of a symbiont- induced tubovesicular network for nutrient acquisition from host","type":"exact"}],"termid":"GO:0085019"}


id: PBO:0011508
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis and hyperpyruvatemia","termid":"PBO:0011508"}


id: PATO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Open to view or not covered by another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exposed","termid":"PATO:0002425"}


id: SO:1000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the insertion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000066 sequence_variant_causing_plus_1_frameshift_mutation (obsolete SO:1000066)","synonyms":[{"name":"plus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing plus 1 frameshift mutation","type":"exact"}],"termid":"SO:1000066"}


id: SO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial LSU rRNA is an RNA component of the large subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA","synonyms":[{"name":"MT LSU rRNA","type":"exact"},{"name":"mitochondrial LSU rRNA","type":"exact"},{"name":"mitochondrial large subunit rRNA","type":"exact"}],"termid":"SO:0002345"}


id: MONDO:0011903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2J (CMT2J) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by a relatively late onset, pupillary abnormalities and deafness, in most patients, associated with distal weakness and muscle atrophy.","definition_xrefs":["Orphanet:99943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2J","secondary_identifiers":["DOID:0110157","MEDGEN:375107","OMIM:607736","GARD:9198","SCTID:717014003","icd11.foundation:1498789307","MESH:C535417","UMLS:C1843153"],"synonyms":[{"name":"CMT 2J","type":"related"},{"name":"CMT2J","type":"exact"},{"name":"Charcot Marie Tooth disease type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 with hearing loss and pupillary abnormalities","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2, with hearing loss and pupillary abnormalities","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2J","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2J","type":"related"}],"termid":"MONDO:0011903","xrefs":{"Monarch":{"xref_id":"0011903"}}}


id: PBO:0028831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_absent_from_cell","termid":"PBO:0028831"}


id: PATO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000496 phase value (obsolete PATO:0000496)","termid":"PATO:0000496"}


id: GO:0000340
data:
  {"annotated_genes":["SJAG_00507","SJAG_03223","SJAG_01830","SJAG_01625","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65412,74044,74779,79674,99775],"is_not":false,"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"RNA 7-methylguanosine cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA m7G cap binding","type":"exact"}],"termid":"GO:0000340","terms_by_termid":{"GO:0000340":null}}


id: PBO:0065022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 1","termid":"PBO:0065022"}


id: PBO:0084327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ketopantoate hydroxymethyltransferase; required for pantothenic acid biosynthesis, converts 2-oxoisovalerate into 2-dehydropantoate","termid":"PBO:0084327"}


id: PBO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily U member 1","termid":"PBO:0052219"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: PBO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 9","termid":"PBO:0061351"}


id: MONDO:0019637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia is a developmental anomaly in which one or both kidneys (unilateral or bilateral renal hypoplasia, respectively) have a deficit in the number of nephrons and may be small. Oligomeganephronia represents a severe variant of hypoplasia in which nephron number is reduced by 80% and nephrons are markedly hypertrophied.","definition_xrefs":["Orphanet:93101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia","secondary_identifiers":["HP:0000089","DOID:0080204","MedDRA:10049102","GARD:19172","MEDGEN:120571","NANDO:2200155","SCTID:32659003","UMLS:C0266295"],"synonyms":[{"name":"renal hypoplasia","type":"exact"},{"name":"renal hypoplasia (disease)","type":"exact"}],"termid":"MONDO:0019637","xrefs":{"Monarch":{"xref_id":"0019637"}}}


id: PBO:0079834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine monophosphate synthetase","termid":"PBO:0079834"}


id: PBO:0066210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 3","termid":"PBO:0066210"}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: GO:0010916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"negative regulation of VLDL clearance","type":"exact"},{"name":"negative regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010916"}


id: GO:0045338
data:
  {"annotated_genes":["SJAG_03352","SJAG_03715","SJAG_04499","SJAG_04568","SJAG_04865","SJAG_02719","SJAG_00413","SJAG_00580","SJAG_01474","SJAG_03349","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76073],"is_not":false,"summary":null,"term":"GO:0045338"},{"annotations":[114925,99596,74155,94413,80123,88652,101884,106540,109496,113764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving farnesyl diphosphate, an intermediate in carotenoid, sesquiterpene, squalene and sterol biosynthesis, as well as a substrate in protein farnesylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"farnesyl diphosphate metabolism","type":"exact"}],"termid":"GO:0045338","terms_by_termid":{"GO:0010142":null,"GO:0045338":null}}


id: GO:0097542
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the cilium where the axoneme ends. The ciliary tip has been implicated in ciliary assembly and disassembly, as well as signal transduction.","definition_xrefs":["GOC:cilia","PMID:23970417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary tip","synonyms":[{"name":"cilial tip","type":"exact"},{"name":"cilium tip","type":"exact"},{"name":"flagellar tip","type":"exact"},{"name":"flagellum tip","type":"exact"}],"termid":"GO:0097542"}


id: GO:0071139
data:
  {"annotated_genes":["SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071140"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during DNA recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["GOC:mah","GOC:vw","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"resolution of DNA recombination intermediates","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of recombination intermediates","type":"exact"}],"termid":"GO:0071139","terms_by_termid":{"GO:0071140":null}}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: MONDO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary epidermolysis bullosa associated with ocular features (obsolete MONDO:0016997)","secondary_identifiers":["Orphanet:263676"],"termid":"MONDO:0016997","xrefs":{"Monarch":{"xref_id":"0016997"}}}


id: GO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin susceptibility/resistance (obsolete GO:0019880)","synonyms":[{"name":"bacteriocin susceptibility/resistance","type":"exact"}],"termid":"GO:0019880"}


