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id: GO:0033229
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id: GO:0018206
data:
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id: MONDO:0020537
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id: PBO:0085859
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id: GO:1904203
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id: PBO:0054397
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id: PBO:0039772
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id: MONDO:0005503
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id: PBO:0085800
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id: GO:0044538
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id: GO:0006637
data:
  {"annotated_genes":["SJAG_03290","SJAG_03813","SJAG_01402","SJAG_01187","SJAG_01474","SJAG_00902","SJAG_02769","SJAG_04865","SJAG_03715","SJAG_03064","SJAG_00947","SJAG_02006","SJAG_03313","SJAG_01524","SJAG_00866","SJAG_00982","SJAG_04499","SJAG_01989","SJAG_03731","SJAG_02380","SJAG_02158","SJAG_03909","SJAG_01139","SJAG_02741","SJAG_03471","SJAG_03310","SJAG_03349","SJAG_04007","SJAG_04895"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96801,108728],"is_not":false,"summary":null,"term":"GO:0006637"},{"annotations":[93227,98373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[91405,68440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[117075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[80125,115787,114363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[77139,79958,74151,114926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[107488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[77223,78920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[65893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[111388,115504],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[87380,87809,72671,73302,74540,78995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75039],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[71552,89872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"thioester metabolic process","termid":"GO:0035383"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA metabolism","type":"exact"}],"termid":"GO:0006637","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0010510":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: MONDO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"disorder of sialic acid metabolism","secondary_identifiers":["SCTID:238050009","UMLS:C0342851","icd11.foundation:1709765980","MEDGEN:575253","ICD9:277.89","Orphanet:309319","GARD:21332"],"termid":"MONDO:0017736","xrefs":{"Monarch":{"xref_id":"0017736"}}}


id: GO:0039511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host interferon receptor.","definition_xrefs":["UniProtKB-KW:KW-1091","GOC:sp","GOC:bf","VZ:843"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host interferon receptor activity (obsolete GO:0039511)","synonyms":[{"name":"down-regulation by virus of host interferon receptor activity","type":"exact"},{"name":"downregulation by virus of host interferon receptor activity","type":"exact"},{"name":"inhibition by virus of host interferon receptor activity","type":"narrow"},{"name":"inhibition of host interferon receptors by virus","type":"exact"},{"name":"negative regulation by virus of host interferon receptor activity","type":"exact"}],"termid":"GO:0039511"}


id: MONDO:0011497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary North American Indian childhood cirrhosis is a severe autosomal recessive intrahepatic cholestasis that has only been described in aboriginal children from northwestern Quebec. Manifesting first as transient neonatal jaundice, the disease evolves into periportal fibrosis and cirrhosis during a period ranging from childhood to adolescence.","definition_xrefs":["Orphanet:168583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"hereditary North American Indian childhood cirrhosis","secondary_identifiers":["SCTID:699189004","icd11.foundation:1992710077","OMIM:604901","MESH:C565737","UMLS:C1858051","MEDGEN:387974","GARD:17037"],"synonyms":[{"name":"NAIC","type":"related"},{"name":"NORTH American Indian childhood cirrhosis","type":"related"}],"termid":"MONDO:0011497","xrefs":{"Monarch":{"xref_id":"0011497"}}}


id: PBO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 1","termid":"PBO:0048512"}


id: FYPO:0001160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during stationary phase","synonyms":[{"name":"cell cycle arrest in mitotic G2 phase during stationary phase","type":"related"},{"name":"mitotic G2 phase arrest during stationary phase","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during stationary phase","type":"exact"}],"termid":"FYPO:0001160"}


id: PR:Q9P6N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.16c","synonyms":[{"name":"Spom972h-atg1802","type":"exact"},{"name":"meiotically up-regulated gene 179 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N1"}


id: PR:P87150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25H2.09 gene.","definition_xrefs":["UniProtKB:P87150","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.09","synonyms":[{"name":"Spom972h-SPBC25H2.09","type":"exact"}],"termid":"PR:P87150"}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: MONDO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms which arise from or metastasize to the optic or second cranial nerve which extends from the optic disk of the eye and joins the optic chiasm. Clinical features may include visual loss, proptosis, and local pain. The majority of optic nerve tumors or optic gliomas.","definition_xrefs":["NCIT:C4801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic nerve neoplasm","secondary_identifiers":["MESH:D019574","ICD9:239.7","EFO:1001073","SCTID:395505000","UMLS:C0524802","MEDGEN:101181","DOID:3419"],"synonyms":[{"name":"cranial nerve II neoplasm","type":"exact"},{"name":"cranial nerve II neoplasm (disease)","type":"exact"},{"name":"cranial nerve II neoplasms","type":"exact"},{"name":"cranial nerve II tumor","type":"exact"},{"name":"cranial nerve II tumour","type":"exact"},{"name":"neoplasm of cranial nerve II","type":"exact"},{"name":"neoplasm of optic nerve","type":"exact"},{"name":"neoplasm of second cranial nerve","type":"exact"},{"name":"neoplasm of the optic nerve","type":"exact"},{"name":"neoplasm of the second cranial nerve","type":"exact"},{"name":"neoplasms, optic nerve","type":"exact"},{"name":"neoplasms, second cranial nerve","type":"exact"},{"name":"optic nerve neoplasm","type":"exact"},{"name":"optic nerve neoplasms","type":"exact"},{"name":"optic nerve tumor","type":"exact"},{"name":"optic nerve tumour","type":"exact"},{"name":"second cranial nerve neoplasm","type":"exact"},{"name":"second cranial nerve neoplasms","type":"exact"},{"name":"second cranial nerve tumor","type":"exact"},{"name":"second cranial nerve tumour","type":"exact"},{"name":"tumor of cranial nerve II","type":"exact"},{"name":"tumor of optic nerve","type":"exact"},{"name":"tumor of second cranial nerve","type":"exact"},{"name":"tumor of the optic nerve","type":"exact"},{"name":"tumor of the second cranial nerve","type":"exact"},{"name":"tumour of cranial nerve II","type":"exact"},{"name":"tumour of optic nerve","type":"exact"},{"name":"tumour of second cranial nerve","type":"exact"},{"name":"tumour of the optic nerve","type":"exact"},{"name":"tumour of the second cranial nerve","type":"exact"}],"termid":"MONDO:0002640","xrefs":{"Monarch":{"xref_id":"0002640"}}}


id: GO:0102808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + pelargonidin 3-O-beta-D-glucoside = H+ + pelargonidin 3-O-sophoroside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 2''-O-glucosyltransferase activity (obsolete GO:0102808)","termid":"GO:0102808"}


id: PBO:0062787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORC1 pseudogene 1","termid":"PBO:0062787"}


id: GO:1903300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexokinase activity.","definition_xrefs":["PMID:15804508","GOC:mr","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinase activity","termid":"GO:0033673"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexokinase activity","synonyms":[{"name":"down regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down regulation of hexokinase D","type":"related"},{"name":"down regulation of hexokinase activity","type":"exact"},{"name":"down regulation of hexokinase type I activity","type":"narrow"},{"name":"down regulation of hexokinase type II activity","type":"narrow"},{"name":"down regulation of hexokinase type III activity","type":"narrow"},{"name":"down regulation of hexokinase type IV","type":"related"},{"name":"down regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"down-regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down-regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down-regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down-regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down-regulation of hexokinase D","type":"related"},{"name":"down-regulation of hexokinase activity","type":"exact"},{"name":"down-regulation of hexokinase type I activity","type":"narrow"},{"name":"down-regulation of hexokinase type II activity","type":"narrow"},{"name":"down-regulation of hexokinase type III activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV","type":"related"},{"name":"down-regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"downregulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"downregulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"downregulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"downregulation of hexokinase (phosphorylating)","type":"exact"},{"name":"downregulation of hexokinase D","type":"related"},{"name":"downregulation of hexokinase activity","type":"exact"},{"name":"downregulation of hexokinase type I activity","type":"narrow"},{"name":"downregulation of hexokinase type II activity","type":"narrow"},{"name":"downregulation of hexokinase type III activity","type":"narrow"},{"name":"downregulation of hexokinase type IV","type":"related"},{"name":"downregulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"downregulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"inhibition of ATP-dependent hexokinase activity","type":"narrow"},{"name":"inhibition of ATP:D-hexose 6-phosphotransferase activity","type":"narrow"},{"name":"inhibition of glucose ATP phosphotransferase activity","type":"narrow"},{"name":"inhibition of hexokinase (phosphorylating)","type":"narrow"},{"name":"inhibition of hexokinase D","type":"related"},{"name":"inhibition of hexokinase activity","type":"narrow"},{"name":"inhibition of hexokinase type I activity","type":"narrow"},{"name":"inhibition of hexokinase type II activity","type":"narrow"},{"name":"inhibition of hexokinase type III activity","type":"narrow"},{"name":"inhibition of hexokinase type IV","type":"related"},{"name":"inhibition of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"inhibition of hexokinase type IV glucokinase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"negative regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"negative regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"negative regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"negative regulation of hexokinase D","type":"related"},{"name":"negative regulation of hexokinase type I activity","type":"narrow"},{"name":"negative regulation of hexokinase type II activity","type":"narrow"},{"name":"negative regulation of hexokinase type III activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV","type":"related"},{"name":"negative regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903300"}


id: PATO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A chromatic property that is the relative position of different hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color pattern","termid":"PATO:0000019"}


id: PR:O74495
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.07c","synonyms":[{"name":"Spom972h-wtf18","type":"exact"}],"termid":"PR:O74495"}


id: PBO:0040228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4","termid":"PBO:0040228"}


id: GO:1903372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["PMID:24891604","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum tubular network organization","termid":"GO:1903371"},{"relation_name":"negatively_regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum tubular network organization","synonyms":[{"name":"down regulation of ER tubular network organisation","type":"exact"},{"name":"down regulation of ER tubular network organization","type":"exact"},{"name":"down regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"down regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"down-regulation of ER tubular network organisation","type":"exact"},{"name":"down-regulation of ER tubular network organization","type":"exact"},{"name":"down-regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"down-regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"downregulation of ER tubular network organisation","type":"exact"},{"name":"downregulation of ER tubular network organization","type":"exact"},{"name":"downregulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"downregulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"inhibition of ER tubular network organisation","type":"narrow"},{"name":"inhibition of ER tubular network organization","type":"narrow"},{"name":"inhibition of endoplasmic reticulum tubular network organisation","type":"narrow"},{"name":"inhibition of endoplasmic reticulum tubular network organization","type":"narrow"},{"name":"negative regulation of ER tubular network organisation","type":"exact"},{"name":"negative regulation of ER tubular network organization","type":"exact"},{"name":"negative regulation of endoplasmic reticulum tubular network organisation","type":"exact"}],"termid":"GO:1903372"}


id: GO:1903721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23675531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"positively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of I-kappaB phosphorylation","synonyms":[{"name":"activation of I-kappaB phosphorylation","type":"narrow"},{"name":"activation of IKB phosphorylation","type":"narrow"},{"name":"activation of IkappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"positive regulation of IKB phosphorylation","type":"exact"},{"name":"positive regulation of IkappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up regulation of IKB phosphorylation","type":"exact"},{"name":"up regulation of IkappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of IKB phosphorylation","type":"exact"},{"name":"up-regulation of IkappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"upregulation of I-kappaB phosphorylation","type":"exact"},{"name":"upregulation of IKB phosphorylation","type":"exact"},{"name":"upregulation of IkappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903721"}


id: PBO:0066047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 3","termid":"PBO:0066047"}


id: MONDO:0009889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder characterized by the development of cysts affecting the collecting ducts. It is frequently associated with hepatic involvement.","definition_xrefs":["Orphanet:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"polycystic kidney disease","termid":"MONDO:0020642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"autosomal recessive polycystic kidney disease","secondary_identifiers":["GARD:8378","ICD9:753.14","DOID:0110861","icd11.foundation:1424110943","MedDRA:10036047","MEDGEN:39076","NANDO:2200154","NCIT:C84579","SCTID:28770003","NANDO:1200369","UMLS:C0085548","NORD:831"],"synonyms":[{"name":"AR-PKD","type":"exact"},{"name":"ARPKD","type":"exact"},{"name":"PKHD1","type":"related"},{"name":"autosomal recessive polycystic kidney","type":"exact"},{"name":"polycystic kidney and hepatic disease 1","type":"narrow"},{"name":"polycystic kidney disease, autosomal recessive","type":"exact"},{"name":"polycystic kidney disease, infantile type","type":"exact"},{"name":"polycystic kidney disease, infantile, type I","type":"narrow"}],"termid":"MONDO:0009889","xrefs":{"Monarch":{"xref_id":"0009889"}}}


id: PBO:0056911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER1 repeat containing imprinted transcript 1","termid":"PBO:0056911"}


id: GO:0019722
data:
  {"annotated_genes":["SJAG_02429","SJAG_03486","SJAG_02858","SJAG_04871","SJAG_03793","SJAG_03879","SJAG_03501","SJAG_01181","SJAG_00296","SJAG_04551","SJAG_03802","SJAG_03799","SJAG_04668","SJAG_04471","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65154,91182,97650,117409],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[79502,98099,72855,92367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[118256,116167,116505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[100997,116154],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[110992,102150],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01181":null,"SJAG_02429":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03879":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Calcium_signaling"],"synonyms":[{"name":"calcium ion signaling","type":"exact"},{"name":"calcium signaling","type":"exact"},{"name":"calcium signalling","type":"exact"},{"name":"calcium-mediated signalling","type":"exact"}],"termid":"GO:0019722","terms_by_termid":{"GO:0019722":null,"GO:0050850":null,"GO:0061762":null,"GO:0097720":null,"GO:0106057":null}}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0027926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation_in_h-_cells","termid":"PBO:0027926"}


id: MONDO:1010572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in long-tailed chinchilla.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, long-tailed chinchilla","secondary_identifiers":["OMIA:000279-34839"],"termid":"MONDO:1010572","xrefs":{"Monarch":{"xref_id":"1010572"}}}


id: MONDO:0014186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ARL2BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa with or without situs inversus","secondary_identifiers":["MEDGEN:1658130","OMIM:615434","UMLS:C4747737","DOID:0110419","ICD10CM:H35.5","GARD:15965"],"synonyms":[{"name":"ARL2BP retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ARL2BP","type":"exact"},{"name":"retinitis pigmentosa with or without situs inversus","type":"exact"}],"termid":"MONDO:0014186","xrefs":{"Monarch":{"xref_id":"0014186"}}}


id: GO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus development","termid":"GO:0048538"}


id: PBO:0054059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1402","termid":"PBO:0054059"}


id: FYPO:0000999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is larger than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"enlarged nucleus during nitrogen starvation","synonyms":[{"name":"enlarged nuclei during nitrogen starvation","type":"exact"},{"name":"enlarged nucleus during nitrogen depletion","type":"exact"},{"name":"enlarged nucleus during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000999"}


id: GO:1905479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["PMID:10377385","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-ammonia ligase activity (obsolete GO:1905479)","synonyms":[{"name":"down regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down regulation of glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"down-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down-regulation of glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"downregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"downregulation of L-glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"downregulation of glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"inhibition of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"inhibition of L-glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamate-ammonia ligase activity","type":"narrow"},{"name":"inhibition of glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"negative regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"negative regulation of L-glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905479"}


id: FYPO:0006076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"siRNA absent from cell","synonyms":[{"name":"siRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"siRNA absent from cell during vegetative growth","type":"exact"},{"name":"small interfering RNA absent from cell","type":"exact"}],"termid":"FYPO:0006076"}


id: MONDO:0013138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 2","secondary_identifiers":["OMIM:613106","UMLS:C2751289","MEDGEN:442695","MESH:C567749"],"synonyms":[{"name":"BRV2","type":"exact"},{"name":"vertigo, benign recurrent, 2","type":"exact"}],"termid":"MONDO:0013138","xrefs":{"Monarch":{"xref_id":"0013138"}}}


id: MONDO:0003794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mediastinal neurilemmoma (obsolete MONDO:0003794)","termid":"MONDO:0003794","xrefs":{"Monarch":{"xref_id":"0003794"}}}


id: GO:0034337
data:
  {"annotated_genes":["SJAG_00886","SJAG_04266","SJAG_00195"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61053,113841],"is_not":false,"summary":null,"term":"GO:0034337"},{"annotations":[98478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061818"}]},"cv_name":"biological_process","definition":"The process of assisting in the covalent and noncovalent assembly of single or multimeric RNAs into the correct tertiary structure.","definition_xrefs":["PMID:10393192","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00886":null,"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA folding","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA chaperone","type":"related"}],"termid":"GO:0034337","terms_by_termid":{"GO:0034337":null,"GO:0061818":null}}


id: MONDO:0009037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis with anomalies of the cranial base and digits","secondary_identifiers":["UMLS:C1857493","MESH:C565666","MEDGEN:347469","OMIM:218530"],"synonyms":[{"name":"craniosynostosis with anomalies of the cranial base and digits","type":"exact"}],"termid":"MONDO:0009037","xrefs":{"Monarch":{"xref_id":"0009037"}}}


id: PBO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0031606"}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: GO:1990958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["PMID:21382270"],"gene_count":0,"genotype_count":0,"name":"obsolete response to thyrotropin-releasing hormone (obsolete GO:1990958)","synonyms":[{"name":"response to TRH","type":"related"}],"termid":"GO:1990958"}


id: PBO:0054126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1492","termid":"PBO:0054126"}


id: PBO:0075432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANXA2 overlapping transcript 1","termid":"PBO:0075432"}


id: _global:orthologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_to","termid":"_global:orthologous_to"}


id: PR:O94336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FCP1 homology domain-containing protein C1271.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.03c","synonyms":[{"name":"Spom972h-SPBC1271.03c","type":"exact"}],"termid":"PR:O94336"}


id: MONDO:0015617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary gastro-esophageal disease (obsolete MONDO:0015617)","secondary_identifiers":["Orphanet:165658"],"synonyms":[{"name":"genetic gastro-esophageal disease","type":"exact"}],"termid":"MONDO:0015617","xrefs":{"Monarch":{"xref_id":"0015617"}}}


id: MONDO:1012542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyometra, non-human animal","termid":"MONDO:1011921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyometra, dog","secondary_identifiers":["OMIA:002391-9615"],"termid":"MONDO:1012542","xrefs":{"Monarch":{"xref_id":"1012542"}}}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: FYPO:0005996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any ribosomal RNA (rRNA) primary transcript, rRNA precursor or processing intermediate, or mature rRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered rRNA or precursor level","synonyms":[{"name":"abnormal rRNA or precursor level","type":"exact"},{"name":"altered rRNA or precursor accumulation","type":"related"},{"name":"altered rRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered rRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered rRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005996"}


id: GO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of beta-alanyl amine conjugate from a precursor biogenic amine, such as dopamine or histamine.","definition_xrefs":["GOC:bf","ISBN:0198506732","PMID:12957543","PMID:25229196","PMID:12900414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"beta-alanyl amine synthase activity","synonyms":[{"name":"N-beta-alanyl dopamine synthetase activity","type":"exact"},{"name":"NBAD transferase activity","type":"exact"},{"name":"beta-alanyl-dopamine synthase activity","type":"related"}],"termid":"GO:0003833"}


id: PBO:0069466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 731, pseudogene","termid":"PBO:0069466"}


id: GO:0140901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-asparagine(out) + Na+(out) = L-asparagine(in) + Na+(in).","definition_xrefs":["PMID:21511949","PMID:28416685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"L-asparagine transmembrane transporter activity","termid":"GO:0015182"},{"relation_name":"is_a","term_name":"alanine:sodium symporter activity","termid":"GO:0015655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-asparagine:sodium symporter activity","secondary_identifiers":["TC:2.A.18.6.13","RHEA:71383"],"synonyms":[{"name":"asparagine:sodium symporter activity","type":"exact"},{"name":"sodium:L-asparagine symporter activity","type":"exact"},{"name":"sodium:asparagine symporter activity","type":"exact"}],"termid":"GO:0140901"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:15840053","GOC:dph","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: PBO:0041161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 16","termid":"PBO:0041161"}


id: MONDO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 43","secondary_identifiers":["MEDGEN:1684830","OMIM:618751","DOID:0111917","UMLS:C5231490","GARD:18414"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 43","type":"related"},{"name":"SPGF43","type":"related"}],"termid":"MONDO:0032898","xrefs":{"Monarch":{"xref_id":"0032898"}}}


id: PATO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001221 plane_angle_unit (obsolete PATO:0001221)","termid":"PATO:0001221"}


id: MONDO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophy of tongue papillae","secondary_identifiers":["MEDGEN:581137","SCTID:6971002","ICD9:529.3","icd11.foundation:1189946017","DOID:13333","ICD10CM:K14.3","UMLS:C0392494"],"synonyms":[{"name":"tongue papillary hypertrophy","type":"exact"}],"termid":"MONDO:0001689","xrefs":{"Monarch":{"xref_id":"0001689"}}}


id: PBO:0084977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084977"}


id: MONDO:0015380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dermoid cyst is a rare, benign cutaneous neoplasm containing keratinized epithelium and dermal derivatives, such as hair follicles, sweat and sebaceous glands, smooth muscle or fibroadipose tissue, which usually manifests as a firm, nonpulsatile mass, often with a sinus opening or a hair-bearing punctum, most commonly located in the periorbital and nasal area.","definition_xrefs":["Orphanet:141051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dermoid cyst","secondary_identifiers":["SCTID:763220008","GARD:19938","UMLS:C4706321","MEDGEN:1646552"],"synonyms":[{"name":"dermoid cyst of the face","type":"exact"}],"termid":"MONDO:0015380","xrefs":{"Monarch":{"xref_id":"0015380"}}}


id: PBO:0083263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect","termid":"PBO:0083263"}


id: PBO:0066223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM26 antisense RNA 1","termid":"PBO:0066223"}


id: PBO:0086606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; functions together with HAM1 to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA, without affecting uptake or incorporation of uracil into RNA; proposed to be involved in the metabolism of purine and pyrimidine base analogues; deletion mutants are sensitive to HAP and AHA","termid":"PBO:0086606"}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: FYPO:0007413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance during G0","termid":"FYPO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere morphology during G0","synonyms":[{"name":"abnormal chromosome morphology at telomere during G0","type":"exact"},{"name":"abnormal chromosome morphology at telomeric region during G0","type":"exact"},{"name":"abnormal telomere morphology during cell quiescence","type":"exact"},{"name":"abnormal telomere morphology during quiescence","type":"exact"},{"name":"abnormal telomeric region morphology during G0","type":"exact"}],"termid":"FYPO:0007413"}


id: GO:0042650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane of prothylakoids, underdeveloped thylakoids found in etioplasts, lacking competent photosynthetic membranes.","definition_xrefs":["PMID:11532175","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid membrane","termid":"GO:0055035"},{"relation_name":"part_of","term_name":"prothylakoid","termid":"GO:0042649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"prothylakoid membrane","termid":"GO:0042650"}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: PBO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA and Rab interacting protein","termid":"PBO:0060381"}


id: FYPO:0003561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which prospore-specific spindle pole body remodeling is abnormal. Prospore-specific spindle pole body remodeling takes place during the second meiotic nuclear division during ascospore formation and results in the structural reorganization of the SPB, including the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["GO:001322","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal prospore-specific spindle pole body remodeling","synonyms":[{"name":"abnormal ascospore-type prospore-specific spindle pole body remodeling","type":"exact"},{"name":"abnormal forespore-specific spindle pole body remodeling","type":"exact"},{"name":"abnormal prospore-specific SPB remodeling","type":"exact"}],"termid":"FYPO:0003561"}


id: MONDO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intraductal papillary mucinous carcinoma of pancreas (obsolete MONDO:0018524)","termid":"MONDO:0018524","xrefs":{"Monarch":{"xref_id":"0018524"}}}


id: FYPO:0002678
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119363,119371],"is_not":false,"summary":null,"term":"FYPO:0002678"},{"annotations":[119370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"protein phosphorylation abolished","type":"exact"}],"termid":"FYPO:0002678","terms_by_termid":{"FYECO:0000207":null,"FYPO:0002033":null,"FYPO:0002678":null}}


id: GO:0014908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. This process occurs as part of the process of skeletal muscle regeneration. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube differentiation","termid":"GO:0014902"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube differentiation involved in skeletal muscle regeneration","termid":"GO:0014908"}


id: GO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NADP-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"NADP-malic enzyme C4 photosynthesis","secondary_identifiers":["MetaCyc:PWY-241"],"termid":"GO:0009762"}


id: PR:O42937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit beta' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04096","PANTHER:PTHR19876:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit beta' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.13c","secondary_identifiers":["UniProtKB:O42937"],"synonyms":[{"name":"Spom972h-COPB2","type":"exact"},{"name":"beta'-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta'-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42937"}


id: MONDO:0958096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monomorphic epitheliotropic intestinal T-cell lymphoma","secondary_identifiers":["MEDGEN:474158","Orphanet:652658","UMLS:C3272525","NCIT:C96058"],"termid":"MONDO:0958096","xrefs":{"Monarch":{"xref_id":"0958096"}}}


id: GO:0120173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["PMID:24798735","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120173)","termid":"GO:0120173"}


id: PATO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hardness","synonyms":[{"name":"impenetrability","type":"related"},{"name":"toughness","type":"related"}],"termid":"PATO:0000048"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["EC:2.4.1.219","RHEA:19385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05882","MetaCyc:2.4.1.219-RXN"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: GO:1904633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23692924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of podocyte apoptotic process","synonyms":[{"name":"regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"regulation of podocyte apoptosis","type":"narrow"}],"termid":"GO:1904633"}


id: MONDO:0015840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complete septate uterus is a rare, non-syndromic uterovaginal malformation characterized by a uterus that has a longitudinal septum which elongates from the uterine fundus to the internal or external cervical os. Most often women are asymptomatic, however dysmenorrhoea, unilateral obstruction, and endometriosis could be observed. Unlike urinary tract abnormalities, which are very rarely associated, poor reproductive outcome is frequent.","definition_xrefs":["Orphanet:180126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate uterus","termid":"MONDO:0015839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete septate uterus","secondary_identifiers":["UMLS:C2957116","GARD:20181","MEDGEN:1672501"],"synonyms":[{"name":"total septate uterus","type":"exact"}],"termid":"MONDO:0015840","xrefs":{"Monarch":{"xref_id":"0015840"}}}


id: GO:0034534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-methylnaphthalene + NADH + H+ + O2 = 1-hydroxymethylnaphthalene + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0795"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-methylnaphthalene hydroxylase activity (obsolete GO:0034534)","termid":"GO:0034534"}


id: GO:1902137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","PMID:8910615","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"(-)-secoisolariciresinol metabolic process","termid":"GO:1902136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(-)-secoisolariciresinol catabolic process","synonyms":[{"name":"(-)-secoisolariciresinol breakdown","type":"exact"},{"name":"(-)-secoisolariciresinol catabolism","type":"exact"},{"name":"(-)-secoisolariciresinol degradation","type":"exact"}],"termid":"GO:1902137"}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: PBO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 9","termid":"PBO:0071781"}


id: PBO:0074066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 41","termid":"PBO:0074066"}


id: GO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"activation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"stimulation of amino acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"up-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"upregulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051943"}


id: MONDO:0018864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kikuchi-Fujimoto disease (KFD) is a benign and self-limited disorder, characterized by regional cervical lymphadenopathy with tenderness, usually accompanied with mild fever and night sweats. Less frequent symptoms include weight loss, nausea, vomiting, sore throat.","definition_xrefs":["Orphanet:50918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kikuchi-Fujimoto disease","secondary_identifiers":["MESH:D020042","UMLS:C0398367","MEDGEN:97979","NCIT:C71719","GARD:6834","SCTID:127217009"],"synonyms":[{"name":"Kikuchi disease","type":"exact"},{"name":"Kikuchi necrotizing lymphadenitis","type":"related"},{"name":"Kikuchi's disease","type":"related"},{"name":"Kikuchi-Fujimoto's disease","type":"related"},{"name":"histiocytic necrotising lymphadenitis","type":"related"},{"name":"histiocytic necrotizing lymphadenitis","type":"exact"},{"name":"nosocomial Kikuchi's disease","type":"related"}],"termid":"MONDO:0018864","xrefs":{"Monarch":{"xref_id":"0018864"}}}


id: PBO:0078338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 4-1","termid":"PBO:0078338"}


id: PBO:0048228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase like 1","termid":"PBO:0048228"}


id: PBO:0005566
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.11","termid":"PBO:0005566"}


id: MONDO:0009605
data:
  {"annotated_genes":["SJAG_04217","SJAG_03929"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85501,85502],"is_not":false,"summary":null,"term":"MONDO:0009605"}]},"cv_name":"mondo","definition":"Any methemoglobinemia in which the cause of the disease is a mutation in the CYB5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"methemoglobinemia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112316","GARD:15196","MEDGEN:925090","OMIM:250790","MESH:C567102","UMLS:C4285231"],"synonyms":[{"name":"CYB5A methemoglobinemia","type":"exact"},{"name":"METAG","type":"related"},{"name":"isolated 17,20-lyase deficiency, Pure","type":"related"},{"name":"methemoglobinemia and ambiguous genitalia","type":"related"},{"name":"methemoglobinemia caused by mutation in CYB5A","type":"exact"},{"name":"methemoglobinemia due to deficiency of cytochrome B5","type":"related"},{"name":"methemoglobinemia due to deficiency of cytochrome B5, formerly","type":"related"},{"name":"methemoglobinemia type 4","type":"exact"},{"name":"methemoglobinemia type IV","type":"related"},{"name":"methemoglobinemia type IV, formerly","type":"related"}],"termid":"MONDO:0009605","terms_by_termid":{"MONDO:0009605":null},"xrefs":{"Monarch":{"xref_id":"0009605"}}}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: MONDO:0023165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"endosalpingiosis","termid":"MONDO:0001283"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"florid cystic endosalpingiosis of the uterus","secondary_identifiers":["MEDGEN:419405","MESH:C537064","UMLS:C2931410"],"synonyms":[{"name":"cystic endosalpingiosis of the uterus","type":"related"},{"name":"florid cystic endosalpingiosis","type":"related"},{"name":"intramural florid cystic endosalpingiosis in lower uterine segment of the uterus","type":"related"},{"name":"intramural florid cystic endosalpingiosis of the uterus","type":"related"}],"termid":"MONDO:0023165","xrefs":{"Monarch":{"xref_id":"0023165"}}}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: PBO:0075318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOD1 divergent transcript","termid":"PBO:0075318"}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: PBO:0065063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforin 1","termid":"PBO:0065063"}


id: PBO:0085398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein; involved in G-protein mediated pheromone signaling pathway; overproduction suppresses bem1 mutations; MDG1 has a paralog, CRP1, that arose from the whole genome duplication","termid":"PBO:0085398"}


id: MONDO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm characterized by the presence of benign epithelial and myoepithelial cells and a mesenchymal component that may contain mucoid, myxoid, cartilaginous, or osseous areas. It may be completely or partially encapsulated. It occurs in the parotid gland, submandibular gland, minor salivary glands in the oral cavity, upper respiratory tract, and nasal cavity and paranasal sinuses. It usually presents as a slow growing painless mass. Infrequently, patients may present with pain and facial palsy. It may recur after excision or transform to a malignant neoplasm (carcinoma ex pleomorphic adenoma).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"benign epithelial tumor of salivary glands","termid":"MONDO:0017168"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pleomorphic adenoma","secondary_identifiers":["ICDO:8940/0","ICD10CM:D11.0","MEDGEN:275400","OMIM:181030","UMLS:C1519176","Orphanet:454821","SCTID:447888006","NCIT:C8602","MESH:D008949","DOID:452","GARD:17789"],"synonyms":[{"name":"Psa","type":"related"},{"name":"Sgpa","type":"related"},{"name":"adenomas, salivary gland pleomorphic, somatic","type":"exact"},{"name":"mixed tumor of the salivary gland","type":"related"},{"name":"mixed tumour of the salivary gland","type":"related"},{"name":"pleomorphic adenoma","type":"exact"},{"name":"pleomorphic adenoma (morphologic abnormality)","type":"exact"},{"name":"pleomorphic salivary gland adenoma","type":"related"},{"name":"salivary gland adenoma, pleomorphic","type":"related"},{"name":"tumor, mixed, benign","type":"exact"}],"termid":"MONDO:0008401","xrefs":{"Monarch":{"xref_id":"0008401"}}}


id: GO:0098927
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in membrane-bounded vesicles between endosomal compartments, e.g, between early endosome and sorting endosome.","definition_xrefs":["PMID:10930469","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle-mediated transport between endosomal compartments","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098927","terms_by_termid":{"GO:0045022":null}}


id: PBO:0070389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROPN1L antisense RNA 1","termid":"PBO:0070389"}


id: GO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sugar phosphorylated on the terminal carbon = a sugar + phosphate.","definition_xrefs":["EC:3.1.3.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sugar-terminal-phosphatase activity","synonyms":[{"name":"sugar-omega-phosphate phosphohydrolase activity","type":"exact"},{"name":"xylitol-5-phosphatase activity","type":"narrow"}],"termid":"GO:0050309"}


id: MONDO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 4","termid":"MONDO:0016924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 4","secondary_identifiers":["GARD:20861","UMLS:C5679719","Orphanet:262716","icd11.foundation:1245616284","MEDGEN:1826041"],"synonyms":[{"name":"partial duplication of chromosome 4p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 4","type":"exact"},{"name":"partial trisomy of chromosome 4p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 4","type":"exact"}],"termid":"MONDO:0016941","xrefs":{"Monarch":{"xref_id":"0016941"}}}


id: GO:0055006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell development","synonyms":[{"name":"cardiocyte development","type":"exact"},{"name":"heart cell development","type":"related"}],"termid":"GO:0055006"}


id: MONDO:0033559
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85823],"is_not":false,"summary":null,"term":"MONDO:0033559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with seizures and language delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18527","OMIM:619000","MEDGEN:1740295","UMLS:C5436574"],"synonyms":[{"name":"IDDSELD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SEIZURES AND LANGUAGE DELAY","type":"related"},{"name":"SETD1B-Related Neurodevelopmental Disorder","type":"exact"}],"termid":"MONDO:0033559","terms_by_termid":{"MONDO:0033559":null},"xrefs":{"Monarch":{"xref_id":"0033559"}}}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: PBO:0029179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0029179"}


id: MONDO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podoconiosis, susceptibility to","secondary_identifiers":["OMIM:614590","MEDGEN:482875","UMLS:C3281245"],"synonyms":[{"name":"Nonfilarial elephantiasis of Lower legs, susceptibility to","type":"related"},{"name":"PDCOS","type":"exact"},{"name":"endemic Nonfilarial elephantiasis, susceptibility to","type":"related"},{"name":"lymphostatic verrucosis, susceptibility to","type":"related"},{"name":"podoconiosis, susceptibility to","type":"exact"}],"termid":"MONDO:0013814","xrefs":{"Monarch":{"xref_id":"0013814"}}}


id: PBO:0069164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 416, pseudogene","termid":"PBO:0069164"}


id: PBO:0068489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 73, pseudogene","termid":"PBO:0068489"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: FYPO:0001962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished protein phosphatase activity","synonyms":[{"name":"protein phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0001962"}


id: PBO:0113530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation; relative distribution to vacuole decreases upon DNA replication stress; targeted to vacuole via AP-3 pathway","termid":"PBO:0113530"}


id: MONDO:0100354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 1","secondary_identifiers":["DOID:0060610","GARD:15195","OMIM:249210","MESH:C536138","SCTID:253781004","UMLS:C5542316","MEDGEN:1778116","NCIT:C98982","Orphanet:2241"],"synonyms":[{"name":"Berdon syndrome","type":"exact"},{"name":"MMIH syndrome","type":"broad"},{"name":"MMIHS","type":"broad"},{"name":"megacystis microcolon intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome, MMIH","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis-hydronephrosis syndrome","type":"broad"}],"termid":"MONDO:0100354","xrefs":{"Monarch":{"xref_id":"0100354"}}}


id: PBO:0046503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI3 intronic transcript 1","termid":"PBO:0046503"}


id: GO:0008376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9605700","Reactome:R-HSA-8931648","Reactome:R-HSA-8855954"],"synonyms":[{"name":"GalNAc transferase activity","type":"exact"}],"termid":"GO:0008376"}


id: PBO:0073984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 4","termid":"PBO:0073984"}


id: PBO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein","termid":"PBO:0060244"}


id: GO:0019501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arsonoacetate, a synthetic, organic compound containing a single arsenic atom.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsonoacetate metabolic process","termid":"GO:0018872"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"arsonoacetate catabolic process","secondary_identifiers":["MetaCyc:P482-PWY"],"synonyms":[{"name":"arsonoacetate breakdown","type":"exact"},{"name":"arsonoacetate catabolism","type":"exact"},{"name":"arsonoacetate degradation","type":"exact"}],"termid":"GO:0019501"}


id: GO:0030515
data:
  {"annotated_genes":["SJAG_03252","SJAG_02377","SJAG_03654","SJAG_02662","SJAG_01234","SJAG_03125","SJAG_03028","SJAG_04754","SJAG_03569","SJAG_00559","SJAG_03846","SJAG_00083","SJAG_04424","SJAG_00879","SJAG_00744","SJAG_00572","SJAG_02702","SJAG_04942","SJAG_02300","SJAG_05186","SJAG_03341","SJAG_04339","SJAG_01907","SJAG_03156","SJAG_04908","SJAG_02608","SJAG_00566","SJAG_04224","SJAG_02372","SJAG_00344","SJAG_05187","SJAG_00897","SJAG_01764","SJAG_04069","SJAG_00945","SJAG_02025","SJAG_02530"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63785,70757,73405,75426,75914,75988,79220,79652,80209,89193,91282,92015,92607,92802,98517,100761,101577,105995,106232,108051,108623,109736,110113,110585,111071,111794,112014,113926],"is_not":false,"summary":null,"term":"GO:0030515"},{"annotations":[95328,74376,101168,89971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034513"},{"annotations":[65857,78037,74300,75782,77902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034511"}]},"cv_name":"molecular_function","definition":"Binding to a small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00344":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00572":null,"SJAG_00744":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_01234":null,"SJAG_01764":null,"SJAG_01907":null,"SJAG_02025":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02530":null,"SJAG_02608":null,"SJAG_02662":null,"SJAG_02702":null,"SJAG_03028":null,"SJAG_03125":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03341":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_03846":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04424":null,"SJAG_04754":null,"SJAG_04908":null,"SJAG_04942":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snoRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030515","terms_by_termid":{"GO:0030515":null,"GO:0034511":null,"GO:0034513":null}}


id: GO:0031080
data:
  {"annotated_genes":["SJAG_04148","SJAG_01374","SJAG_02094","SJAG_03986","SJAG_03299","SJAG_01293","SJAG_04017","SJAG_00471","SJAG_02424","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70236,71633,72763,72959,73499,73966,78026,80328,88960,109872],"is_not":false,"summary":null,"term":"GO:0031080"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates).","definition_xrefs":["PMID:18046406","PMID:19524430","PMID:22419078","GOC:dgf","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_01293":null,"SJAG_01374":null,"SJAG_02094":null,"SJAG_02424":null,"SJAG_03299":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005643"],"is_obsolete":false,"name":"nuclear pore outer ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Nup107-120 complex","type":"exact"},{"name":"Nup107-160 complex","type":"exact"},{"name":"Nup84 complex","type":"exact"}],"termid":"GO:0031080","terms_by_termid":{"GO:0031080":null}}


id: GO:0090131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesenchyme undergo directed movement.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue migration","termid":"GO:0090130"},{"relation_name":"part_of","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration","termid":"GO:0090131"}


id: PBO:0110337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)","termid":"PBO:0110337"}


id: PBO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 4","termid":"PBO:0060935"}


id: PR:000050484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, MOD:00046.","definition_xrefs":["PMID:33131769","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/Phos:(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/Phos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, MOD:00046","type":"narrow"},{"name":"rng2/Phos:(S199,S207)","type":"exact"}],"termid":"PR:000050484"}


id: GO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events during equilibrioception required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual input plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual perception","termid":"GO:0007601"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual perception involved in equilibrioception","synonyms":[{"name":"equilibrioception by visual perception","type":"narrow"},{"name":"perception of orientation with respect to gravity by visual perception","type":"exact"},{"name":"visual perception during equilibrioception","type":"related"}],"termid":"GO:0051356"}


id: FYPO:0002468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, have a larger volume and are longer than normal in the vegetative growth phase of the life cycle. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen elongated vegetative cell population (obsolete FYPO:0002468)","synonyms":[{"name":"inviable elongated cell population with increased cell volume","type":"exact"},{"name":"inviable elongated swollen population","type":"exact"},{"name":"inviable enlarged elongated cell population","type":"related"},{"name":"inviable large elongated cell population","type":"related"},{"name":"inviable swollen long vegetative cell population","type":"exact"}],"termid":"FYPO:0002468"}


id: MONDO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HSD10 disease, infantile type is a clinical subtype of HSD10 disease, a rare neurometabolic disorder. It is characterized by normal early development until 6-18 months of life, followed by progressive neurodegeneration manifesting with developmental regression, progressive visual and hearing troubles, seizures, epilepsy, severe cardiomyopathy, lethargy, hypotonia, poor feeding, choreoathetosis, and movement disorders. Elevated blood levels of isoleucine metabolites and their excretion in urine are reported. The disease is usually fatal around 2-4 years of age.","definition_xrefs":["Orphanet:391428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, infantile type","secondary_identifiers":["UMLS:C5680025","MEDGEN:1843150","GARD:17622"],"synonyms":[{"name":"2-methyl-3-hydroxybutyric aciduria, classic type","type":"exact"},{"name":"2-methyl-3-hydroxybutyric aciduria, infantile type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, classic type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, infantile type","type":"exact"},{"name":"HSD10 deficiency, classic type","type":"exact"},{"name":"HSD10 deficiency, infantile type","type":"exact"},{"name":"HSD10 disease, classic type","type":"exact"},{"name":"MHBD deficiency, classic type","type":"exact"},{"name":"MHBD deficiency, infantile type","type":"exact"}],"termid":"MONDO:0018322","xrefs":{"Monarch":{"xref_id":"0018322"}}}


id: PBO:0061919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 2","termid":"PBO:0061919"}


id: GO:0019220
data:
  {"annotated_genes":["SJAG_01187","SJAG_01906","SJAG_00053","SJAG_02380","SJAG_04422","SJAG_01402","SJAG_05314","SJAG_02613","SJAG_03940","SJAG_03170","SJAG_00685","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90372,104380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[72967,75963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[111388,115504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[118032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[112762,109743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[117562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[89647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[75039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[69941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[75962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00685":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02785":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate metabolism","type":"exact"}],"termid":"GO:0019220","terms_by_termid":{"GO:0006110":null,"GO:0010510":null,"GO:0043456":null,"GO:0045820":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:1905707":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:2001206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of osteoclast differentiation","termid":"GO:0045672"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"positively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast development","synonyms":[{"name":"positive regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001206"}


id: MONDO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 7","secondary_identifiers":["GARD:18492","MEDGEN:1768257","OMIM:619130","UMLS:C5436874"],"synonyms":[{"name":"THC7","type":"exact"},{"name":"Thrombocytopenia, Autosomal Dominant, 7","type":"exact"},{"name":"thrombocytopenia 7","type":"exact"}],"termid":"MONDO:0030867","xrefs":{"Monarch":{"xref_id":"0030867"}}}


id: PBO:0083742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for accurate chromosome segregation; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083742"}


id: PBO:0071763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 10","termid":"PBO:0071763"}


id: GO:0019141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NADP+.","definition_xrefs":["EC:1.1.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-dehydropantolactone reductase activity","termid":"GO:0036441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydropantolactone reductase (B-specific) activity","synonyms":[{"name":"(R)-pantolactone:NADP+ oxidoreductase (B-specific)","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (B-specific) activity","type":"exact"},{"name":"2-ketopantoyl lactone reductase activity","type":"broad"},{"name":"2-oxopantoyl lactone reductase","type":"broad"},{"name":"ketopantoyl lactone reductase activity","type":"broad"}],"termid":"GO:0019141"}


id: MONDO:0012502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"normophosphatemic familial tumoral calcinosis","secondary_identifiers":["OMIM:610455","DOID:0080170","GARD:10878","MESH:C566473","Orphanet:306658","MEDGEN:355311","UMLS:C1864861"],"synonyms":[{"name":"NFTC","type":"related"},{"name":"calcinosis, tumoral, with Normophosphatemia","type":"related"},{"name":"familial normophosphatemic tumoral calcinosis","type":"related"},{"name":"normophosphatemic familial tumoral calcinosis","type":"exact"},{"name":"tumoral calcinosis, familial, normophosphatemic","type":"exact"},{"name":"tumoral calcinosis, normophosphatemic, familial","type":"related"}],"termid":"MONDO:0012502","xrefs":{"Monarch":{"xref_id":"0012502"}}}


id: PBO:0066212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 5","termid":"PBO:0066212"}


id: PBO:0113268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid binding protein; interacts with mitochondria and with Myo2p, functioning as an adaptor that recruits Myo2p and facilitates actin-based transport of mitochondria to the bud; mediates mitochondria anchorage at the bud tip; phosphorylated protein that localizes to the mitochondrial outer membrane; mRNA is targeted to the bud via the transport system involving She2p; member of the DSL1 family of tethering proteins","termid":"PBO:0113268"}


id: PBO:0081790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 718","termid":"PBO:0081790"}


id: GO:1904253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"positively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of bile acid metabolic process","synonyms":[{"name":"activation of bile acid metabolic process","type":"narrow"},{"name":"activation of bile acid metabolism","type":"narrow"},{"name":"positive regulation of bile acid metabolism","type":"exact"},{"name":"up regulation of bile acid metabolic process","type":"exact"},{"name":"up regulation of bile acid metabolism","type":"exact"},{"name":"up-regulation of bile acid metabolic process","type":"exact"},{"name":"up-regulation of bile acid metabolism","type":"exact"},{"name":"upregulation of bile acid metabolic process","type":"exact"},{"name":"upregulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904253"}


id: PR:000050532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me1:(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf2/Me1:(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050532"}


id: GO:0100017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates single organismal cell-cell adhesion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by transcription from RNA polymerase II promoter (obsolete GO:0100017)","termid":"GO:0100017"}


id: FYPO:0004734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of degradation of misfolded or incompletely synthesized protein is decreased.","definition_xrefs":["GO:0006515","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased misfolded protein degradation","synonyms":[{"name":"decreased misfolded or incompletely synthesized protein catabolic process","type":"exact"},{"name":"decreased misfolded or incompletely synthesized protein degradation","type":"exact"},{"name":"decreased misfolded protein degradation during mitotic cell cycle","type":"related"},{"name":"decreased misfolded protein degradation during vegetative growth","type":"exact"},{"name":"misfolded or incompletely synthesized protein catabolism","type":"exact"},{"name":"reduced misfolded protein degradation","type":"exact"}],"termid":"FYPO:0004734"}


id: PBO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.4","termid":"PBO:0002428"}


id: PBO:0091216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm1, partial, adjacent to genomic sequence gap","termid":"PBO:0091216"}


id: GO:0050063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + low-density lipoprotein L-serine = ADP + low-density lipoprotein O-phospho-L-serine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density-lipoprotein particle receptor kinase activity (obsolete GO:0050063)","synonyms":[{"name":"[low-density lipoprotein receptor] kinase activity","type":"exact"},{"name":"low-density-lipoprotein receptor kinase activity","type":"exact"}],"termid":"GO:0050063"}


id: MONDO:0019236
data:
  {"annotated_genes":["SJAG_04681","SJAG_03811","SJAG_01859","SJAG_01359","SJAG_02850","SJAG_03797","SJAG_04882","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013869"},{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007068"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[86148,86149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014719"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010299"},{"annotations":[86129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010298"},{"annotations":[87204,87203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010395"},{"annotations":[86449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013171"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of purine nucleobase metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"},{"relation_name":"is_a","term_name":"purine metabolism disease","termid":"MONDO:0037829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_01859":null,"SJAG_02850":null,"SJAG_03797":null,"SJAG_03811":null,"SJAG_04681":null,"SJAG_04882":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of purine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1958565793","Orphanet:79191","GARD:18965","MedDRA:10061476"],"synonyms":[{"name":"disorder of purine metabolism","type":"related"},{"name":"inborn error of purine nucleobase metabolic process","type":"exact"},{"name":"inborn purine nucleobase metabolic process disorder","type":"exact"},{"name":"rare inborn error of purine nucleobase metabolic process","type":"exact"}],"termid":"MONDO:0019236","terms_by_termid":{"MONDO:0007068":null,"MONDO:0010298":null,"MONDO:0010299":null,"MONDO:0010395":null,"MONDO:0010699":null,"MONDO:0012099":null,"MONDO:0013171":null,"MONDO:0013869":null,"MONDO:0014719":null},"xrefs":{"Monarch":{"xref_id":"0019236"}}}


id: MONDO:0011393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ypoalphalipoproteinemia in which the cause of the disease is a mutation in the ABCA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypoalphalipoproteinemia, primary, 1","secondary_identifiers":["UMLS:C5231558","MEDGEN:1684828","DOID:0080957","OMIM:604091"],"synonyms":[{"name":"FHA","type":"related"},{"name":"FHD","type":"related"},{"name":"HDL cholesterol, Low serum","type":"related"},{"name":"HDL deficiency, familial, 1","type":"exact"},{"name":"HDLD","type":"related"},{"name":"familial HDL deficiency","type":"related"},{"name":"high density lipoprotein deficiency","type":"related"},{"name":"hypoalphalipoproteinemia, familial","type":"exact"},{"name":"hypoalphalipoproteinemia, primary","type":"related"}],"termid":"MONDO:0011393","xrefs":{"Monarch":{"xref_id":"0011393"}}}


id: PR:O94645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymocyte nuclear protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.03c","secondary_identifiers":["UniProtKB:O94645"],"synonyms":[{"name":"Spom972h-THYN1","type":"exact"}],"termid":"PR:O94645"}


id: PBO:0058513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-3","termid":"PBO:0058513"}


id: MONDO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bangstad syndrome is a rare endocrine disease characterized by the association of primordial birdheaded nanism, progressive ataxia, goiter, primary gonadal insufficiency and insulin resistant diabetes mellitus. Plasma concentrations of TSH, PTH, LH, FSH, ACTH, glucagon, and insulin are usually elevated. A generalized cell membrane defect was suggested to be the pathophysiological abnormality in these patients. The mode of inheritance was thought to be autosomal recessive. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:1227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bangstad syndrome","secondary_identifiers":["SCTID:237614004","UMLS:C0342284","MEDGEN:90978","MESH:C537902","OMIM:210740","GARD:812","ICD9:759.89"],"synonyms":[{"name":"Bangstad syndrome","type":"exact"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter, and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goitre and primary gonadal insufficiency","type":"related"},{"name":"ataxia-diabetes-goiter-gonadal insufficiency syndrome","type":"exact"}],"termid":"MONDO:0008874","xrefs":{"Monarch":{"xref_id":"0008874"}}}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: MONDO:0011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous or rarely biallelic mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110678","PMID:12141316","PMID:7531341","PMID:25792100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4A","secondary_identifiers":["GARD:15387","UMLS:C4225413","MEDGEN:908188","OMIM:605809"],"synonyms":[{"name":"CMS Ia1","type":"exact"},{"name":"CMS1A1","type":"exact"},{"name":"CMS4A","type":"exact"},{"name":"Cms Ia1","type":"related"},{"name":"Cms Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrome 4A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4A","type":"exact"},{"name":"congenital myasthenic syndrome type Ia1","type":"related"},{"name":"congenital myasthenic syndrome type Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrometype Ia1","type":"exact"},{"name":"myasthenic syndrome, congenital, 4A, slow-channel","type":"related"}],"termid":"MONDO:0011600","xrefs":{"Monarch":{"xref_id":"0011600"}}}


id: MONDO:0000605
data:
  {"annotated_genes":["SJAG_00610","SJAG_01787","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[85784,85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"An immune system disease that has basis in dysregulation of the hypersensitivity reaction, an inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["ISBN-13:978-0-7817-3514-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity reaction disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3532523","MEDGEN:759636","DOID:0060056","EFO:1002003","NCIT:C3114","SCTID:473010000"],"synonyms":[{"name":"allergic reaction","type":"broad"},{"name":"hypersensitive","type":"exact"},{"name":"hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction","type":"exact"},{"name":"sensitive","type":"broad"},{"name":"sensitivity","type":"broad"}],"termid":"MONDO:0000605","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0000605"}}}


id: GO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early phagosome.","definition_xrefs":["GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"early phagosome membrane","synonyms":[{"name":"early phagocytic vesicle membrane","type":"exact"}],"termid":"GO:0036186"}


id: PBO:0072943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 22","termid":"PBO:0072943"}


id: PBO:0078197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-7 (non-functional)","termid":"PBO:0078197"}


id: PBO:0090510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf11","termid":"PBO:0090510"}


id: FYPO:0007494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of beta-D-glucan measured in the spore wall is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall beta-glucan level","termid":"FYPO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002946","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased ascospore wall beta-glucan level","synonyms":[{"name":"increased ascospore wall beta-D-glucan level","type":"exact"},{"name":"increased ascospore wall beta-glucan accumulation","type":"related"},{"name":"increased ascospore wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased ascospore wall beta-glucan level during vegetative growth","type":"exact"},{"name":"increased spore wall beta-glucan level","type":"exact"}],"termid":"FYPO:0007494"}


id: MONDO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the trigeminal nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal nerve neoplasm","termid":"MONDO:0001420"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal schwannoma","secondary_identifiers":["MEDGEN:83890","DOID:3202","NCIT:C4655","SCTID:277185000","UMLS:C0349582","ICD9:215.9"],"synonyms":[{"name":"fifth cranial nerve neurilemmoma","type":"exact"},{"name":"fifth cranial nerve schwannoma","type":"exact"},{"name":"neurilemmoma of fifth cranial nerve","type":"exact"},{"name":"neurilemmoma of the fifth cranial nerve","type":"exact"},{"name":"neurilemmoma of the trigeminal nerve","type":"exact"},{"name":"neurilemmoma of trigeminal nerve","type":"exact"},{"name":"schwannoma of fifth cranial nerve","type":"exact"},{"name":"schwannoma of the fifth cranial nerve","type":"exact"},{"name":"schwannoma of the trigeminal nerve","type":"exact"},{"name":"schwannoma of trigeminal nerve","type":"exact"},{"name":"trigeminal nerve schwannoma","type":"exact"},{"name":"trigeminal neurilemmoma","type":"exact"},{"name":"trigeminal schwannoma","type":"exact"}],"termid":"MONDO:0002555","xrefs":{"Monarch":{"xref_id":"0002555"}}}


id: GO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine catabolic process","termid":"GO:0006581"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"acetylcholine catabolic process in synaptic cleft","synonyms":[{"name":"acetylcholine breakdown in synaptic cleft","type":"exact"},{"name":"acetylcholine degradation in synaptic cleft","type":"exact"}],"termid":"GO:0001507"}


id: PBO:0041420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 17","termid":"PBO:0041420"}


id: PBO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn6 (predicted)","termid":"PBO:0004476"}


id: GO:0032426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.","definition_xrefs":["GOC:krc","PMID:17021180","GOC:ecd","PMID:27565685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium tip","termid":"GO:0032426"}


id: GO:1905604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:als","PMID:22524708","GOC:aruk","GOC:bc","PMID:30280653","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood-brain barrier permeability","synonyms":[{"name":"down-regulation of BBB permeability","type":"exact"},{"name":"down-regulation of blood-brain barrier permeability","type":"exact"},{"name":"down-regulation of blood/brain barrier permeability","type":"exact"},{"name":"downregulation of BBB permeability","type":"exact"},{"name":"downregulation of blood-brain barrier permeability","type":"exact"},{"name":"downregulation of blood/brain barrier permeability","type":"exact"},{"name":"inhibition of maintenance of permeability of BBB","type":"narrow"},{"name":"inhibition of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"negative regulation of BBB permeability","type":"exact"},{"name":"negative regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905604"}


id: MOD:01638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces a glycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine removal","termid":"MOD:01638"}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: PBO:0073963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 12","termid":"PBO:0073963"}


id: MONDO:0015486
data:
  {"annotated_genes":["SJAG_02509","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85957,85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","definition":"A degenerative, structural disorder of the eye, characterized by a cone-shaped protrusion of the cornea. It may lead to visual disturbances.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:2335","DOID:10126","MedDRA:10023353","UMLS:C0022578","ICD9:371.6","HP:0000563","GARD:6824","icd11.foundation:945228622","ICD9:371.60","MESH:D007640","MEDGEN:44015","SCTID:65636009","NCIT:C26806","OMIMPS:148300","Orphanet:156071"],"synonyms":[{"name":"KC","type":"related"},{"name":"conical cornea","type":"exact"},{"name":"isolated keratoconus","type":"narrow"},{"name":"keratoconus","type":"exact"},{"name":"keratoconus (disease)","type":"exact"},{"name":"noninflammatory corneal thining","type":"related"}],"termid":"MONDO:0015486","terms_by_termid":{"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0015486"}}}


id: GO:0045540
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75498],"is_not":false,"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol metabolic process","termid":"GO:0090181"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1655829"],"synonyms":[{"name":"regulation of cholesterol anabolism","type":"exact"},{"name":"regulation of cholesterol biosynthesis","type":"exact"},{"name":"regulation of cholesterol formation","type":"exact"},{"name":"regulation of cholesterol synthesis","type":"exact"}],"termid":"GO:0045540","terms_by_termid":{"GO:0045540":null}}


id: PBO:0047040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member A","termid":"PBO:0047040"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: PBO:0079082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 3-1","termid":"PBO:0079082"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: GO:0071631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that positively regulates a conjugation process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:mah","GOC:jh","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0000747","GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"mating pheromone secretion involved in positive regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071833"],"synonyms":[{"name":"mating-type pheromone secretion involved in conjugation with cellular fusion","type":"exact"},{"name":"peptide pheromone export involved in positive regulation of conjugation with cellular fusion","type":"related"}],"termid":"GO:0071631"}


id: GO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a staurosporine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"response to staurosporine","termid":"GO:0072733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to staurosporine","termid":"GO:0072734"}


id: PBO:0050720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 6","termid":"PBO:0050720"}


id: GO:0015880
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The directed movement of coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"coenzyme A transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015880","terms_by_termid":{"GO:1990559":null}}


id: PBO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR36","termid":"PBO:0003836"}


id: PBO:0059147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPN domain containing","termid":"PBO:0059147"}


id: GO:1990985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to oxidative stress.","definition_xrefs":["GOC:pg","PMID:25950479"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis in response to oxidative stress (obsolete GO:1990985)","termid":"GO:1990985"}


id: MONDO:0004358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis cancer","termid":"MONDO:0001293"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis carcinoma","secondary_identifiers":["NCIT:C5972","SCTID:372104008","UMLS:C1299239","DOID:7764","MEDGEN:226968"],"synonyms":[{"name":"cancer of subglottis","type":"broad"},{"name":"cancer of the subglottis","type":"broad"},{"name":"carcinoma of subglottis","type":"exact"},{"name":"carcinoma of the subglottis","type":"exact"},{"name":"subglottic cancer","type":"broad"},{"name":"subglottic carcinoma","type":"exact"},{"name":"subglottic throat cancer","type":"broad"},{"name":"subglottis carcinoma","type":"exact"}],"termid":"MONDO:0004358","xrefs":{"Monarch":{"xref_id":"0004358"}}}


id: MONDO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wilms tumor (obsolete MONDO:0000103)","termid":"MONDO:0000103","xrefs":{"Monarch":{"xref_id":"0000103"}}}


id: GO:0033148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"positively_regulates","term_name":"estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"positive regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"positive regulation of estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0033148"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine (obsolete GO:0046924)","termid":"GO:0046924"}


id: PBO:0036004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036004"}


id: PBO:0055828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 3","termid":"PBO:0055828"}


id: GO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of transfer RNA (tRNA) molecules to degradation. Includes processes that both stabilize and destabilize tRNAs.","definition_xrefs":["PMID:21502523","PMID:23572593","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA stability","termid":"GO:0036415"}


id: MONDO:0015107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A form of eye disease that is both rare and inborn.","definition_xrefs":["MONDO:patterns/rare_genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic eye disease (obsolete MONDO:0015107)","secondary_identifiers":["Orphanet:101435"],"synonyms":[{"name":"rare genetic eye disease","type":"exact"},{"name":"rare genetic ophthalmologic disease","type":"exact"}],"termid":"MONDO:0015107","xrefs":{"Monarch":{"xref_id":"0015107"}}}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: PBO:0083974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible ADP-ribosylation factor; GTPase of Ras superfamily involved in regulating cell polarity and invasive growth; localizes to dynamic spots at plasma membrane and modulates PtdIns(4,5)P2 levels to facilitate endocytosis; required for localization of endocytic protein Lsb5p to correct cortical site in cells; also has mRNA binding activity; homolog of mammalian Arf6","termid":"PBO:0083974"}


id: PBO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C1, pseudogene","termid":"PBO:0046978"}


id: PBO:0078162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 39","termid":"PBO:0078162"}


id: MONDO:0009334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia with thermal sensitivity of red cells","secondary_identifiers":["GARD:15179","OMIM:235370","MESH:C565522","UMLS:C1856158","MEDGEN:343488"],"synonyms":[{"name":"hemolytic anemia with thermal sensitivity of red cells","type":"exact"}],"termid":"MONDO:0009334","xrefs":{"Monarch":{"xref_id":"0009334"}}}


id: PBO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 1","termid":"PBO:0047684"}


id: PBO:0056714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 6","termid":"PBO:0056714"}


id: PBO:0084538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1, Erp2p, and Emp24,","termid":"PBO:0084538"}


id: PBO:0083698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the oligosaccharyltransferase complex; located in the ER lumen; catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0083698"}


id: PBO:0071331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 8","termid":"PBO:0071331"}


id: PBO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2042","termid":"PBO:0054637"}


id: FYECO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 72h-7days. This medium is then replaced with nitrogen containing rich medium and cells are allowed to grow for 12-24h.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"72h-7days nitrogen starvation followed by 12-24h recovery in rich medium","termid":"FYECO:0000098"}


id: MONDO:0013445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 9 deficiency","secondary_identifiers":["MEDGEN:462539","MESH:C565165","NANDO:2200787","OMIM:613825","UMLS:C3151189","GARD:18292","DOID:0060303"],"synonyms":[{"name":"C9 classic complement early component deficiency","type":"exact"},{"name":"C9 deficiency","type":"related"},{"name":"C9D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C9","type":"exact"},{"name":"complement component 9 deficiency","type":"exact"}],"termid":"MONDO:0013445","xrefs":{"Monarch":{"xref_id":"0013445"}}}


id: PBO:0067811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 113","termid":"PBO:0067811"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: MONDO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central polydactyly of fingers","secondary_identifiers":["UMLS:C0431903","GARD:21200","MEDGEN:609220","Orphanet:295004","icd11.foundation:243366415","SCTID:205130008"],"synonyms":[{"name":"central polydactyly","type":"related"},{"name":"central polydactyly of hand","type":"exact"},{"name":"mesoaxial polydactyly","type":"exact"},{"name":"mesoaxial polydactyly of fingers","type":"exact"},{"name":"mirror hand","type":"exact"}],"termid":"MONDO:0017456","xrefs":{"Monarch":{"xref_id":"0017456"}}}


id: GO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a disaccharide. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"disaccharide binding","termid":"GO:0048030"}


id: PBO:0063194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 7","termid":"PBO:0063194"}


id: MONDO:0007590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemifacial hyperplasia is a rare morphological anomaly of the maxillofacial region characterized by unilateral overgrowth of all facial structures (bone, soft tissues, teeth), called true hemifacial hypertrophy, or overgrowth of one or more but not all facial structures, called partial hemifacial hypertrophy. It may be isolated or related to some syndromes (e.g. Beckwith-Wiedemann, Proteus, Klippel-Trenaunay-Weber, McCune-Albright syndrome, Neurofibromatosis type 1). It may be associated with airway obstruction, sensorineural hearing loss or swallowing difficulties.","definition_xrefs":["Orphanet:141145"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemifacial hypertrophy","secondary_identifiers":["icd11.foundation:2090544963","GARD:16971","MEDGEN:452987","OMIM:133900","UMLS:C1399354"],"synonyms":[{"name":"facial asymmetry","type":"related"},{"name":"facial hemihypertrophy","type":"related"},{"name":"hemifacial hyperplasia","type":"related"},{"name":"hemifacial hypertrophy","type":"exact"}],"termid":"MONDO:0007590","xrefs":{"Monarch":{"xref_id":"0007590"}}}


id: PBO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pap1/Caf3","termid":"PBO:0001410"}


id: PBO:0040511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1B","termid":"PBO:0040511"}


id: PBO:0074853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 42A","termid":"PBO:0074853"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: GO:0046889
data:
  {"annotated_genes":["SJAG_04018","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[109865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"positively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02613":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of lipid biosynthetic process","type":"narrow"},{"name":"positive regulation of lipid anabolism","type":"exact"},{"name":"positive regulation of lipid biosynthesis","type":"exact"},{"name":"positive regulation of lipid formation","type":"exact"},{"name":"positive regulation of lipid synthesis","type":"exact"},{"name":"positive regulation of lipogenesis","type":"exact"},{"name":"stimulation of lipid biosynthetic process","type":"narrow"},{"name":"up regulation of lipid biosynthetic process","type":"exact"},{"name":"up-regulation of lipid biosynthetic process","type":"exact"},{"name":"upregulation of lipid biosynthetic process","type":"exact"}],"termid":"GO:0046889","terms_by_termid":{"GO:0070452":null,"GO:1902648":null}}


id: PBO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.4","termid":"PBO:0005492"}


id: MONDO:0008182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasopalpebral lipoma-coloboma-telecanthus syndrome is characterized by nasopalpebral lipomas, bilateral lid coloboma, and telecanthus.","definition_xrefs":["Orphanet:2399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopalpebral lipoma-coloboma syndrome","secondary_identifiers":["GARD:3927","MESH:C538338","OMIM:167730","UMLS:C1868660","SCTID:723411003","MEDGEN:358378"],"synonyms":[{"name":"NASOPALPEBRAL lipoma-coloboma syndrome","type":"related"},{"name":"NPLCS","type":"related"},{"name":"Nasopalpebral lipoma coloboma syndrome","type":"related"},{"name":"nasopalpebral lipoma-coloboma syndrome","type":"exact"},{"name":"palpebral coloboma lipoma syndrome","type":"related"},{"name":"palpebral coloboma-lipoma syndrome","type":"related"}],"termid":"MONDO:0008182","xrefs":{"Monarch":{"xref_id":"0008182"}}}


id: PBO:0085980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment","termid":"PBO:0085980"}


id: GO:0010470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastrulation","termid":"GO:0010470"}


id: MONDO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of angiogenesis leading to arteriovenous dilatations: cutaneo-mucosal hemorrhagic telangiectasias and visceral shunting.","definition_xrefs":["Orphanet:774"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telangiectasis","termid":"MONDO:0001576"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia","secondary_identifiers":["NANDO:1200744","GARD:6626","NCIT:C35064","MESH:D013683","ICD9:448.0","NORD:1229","NANDO:2100296","icd11.foundation:714406192","MedDRA:10019883","SCTID:21877004","ICD10CM:I78.0","OMIMPS:187300","MEDGEN:52657","NANDO:2201034","UMLS:C0039445","DOID:1270"],"synonyms":[{"name":"HHT","type":"exact"},{"name":"Osler hemorrhagic telangiectasia syndrome","type":"exact"},{"name":"Osler-Weber-Rendu disease","type":"exact"},{"name":"Rendu-Osler disease","type":"exact"},{"name":"Rendu-Osler-Weber disease","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"telangiectasia, hereditary Hemorrahagic, of Rendu, Osler","type":"exact"},{"name":"telangiectasia, hereditary hemorrhagic","type":"exact"}],"termid":"MONDO:0019180","xrefs":{"Monarch":{"xref_id":"0019180"}}}


id: PBO:0055885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit C","termid":"PBO:0055885"}


id: PATO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in an inactive muscle or muscle fibers by virtue of the bearer's exhibiting gradual lengthening.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001582 relaxational quality (obsolete PATO:0001582)","termid":"PATO:0001582"}


id: PBO:0054034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1365","termid":"PBO:0054034"}


id: PBO:0065452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 3","termid":"PBO:0065452"}


id: PBO:0029214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall","termid":"PBO:0029214"}


id: GO:0031834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurokinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neurokinin receptor binding","synonyms":[{"name":"neurokinin receptor ligand","type":"narrow"}],"termid":"GO:0031834"}


id: MONDO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofacial dysostosis (obsolete MONDO:0000760)","termid":"MONDO:0000760","xrefs":{"Monarch":{"xref_id":"0000760"}}}


id: MONDO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inclusion body fibromatosis (obsolete MONDO:0006251)","termid":"MONDO:0006251","xrefs":{"Monarch":{"xref_id":"0006251"}}}


id: GO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host environment (obsolete GO:0052118)","synonyms":[{"name":"positive energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052118"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: GO:0016497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"substance K receptor activity","synonyms":[{"name":"neurokinin A receptor activity","type":"exact"},{"name":"neuromedin L receptor activity","type":"exact"}],"termid":"GO:0016497"}


id: MONDO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of scleritis with subtypes: necrotising zonal granulomatous inflammation, diffuse non-granulomatous chronic inflammation, mixed pattern of acute purulent inflammation mixed with granulomatous inflammation and sarcoidal pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"necrotizing scleritis","secondary_identifiers":["SCTID:95797003","MEDGEN:6542","UMLS:C0027547","ICD9:379.09"],"termid":"MONDO:0040699","xrefs":{"Monarch":{"xref_id":"0040699"}}}


id: MONDO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early response to neural induction gene","secondary_identifiers":["OMIM:605105","MEDGEN:344332","UMLS:C1854633"],"synonyms":[{"name":"Erni","type":"related"},{"name":"early response to neural induction gene","type":"exact"}],"termid":"MONDO:0011516","xrefs":{"Monarch":{"xref_id":"0011516"}}}


id: PR:O74780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25B2.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25B2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.08","synonyms":[{"name":"Spom972h-SPBC25B2.08","type":"exact"}],"termid":"PR:O74780"}


id: GO:0000822
data:
  {"annotated_genes":["SJAG_02591","SJAG_00233","SJAG_03847","SJAG_03325","SJAG_04131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72030,74666,90567,101321,103583],"is_not":false,"summary":null,"term":"GO:0000822"}]},"cv_name":"molecular_function","definition":"Binding to inositol hexakisphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03847":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inositol hexakisphosphate binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"IP6 binding","type":"exact"},{"name":"InsP6 binding","type":"exact"}],"termid":"GO:0000822","terms_by_termid":{"GO:0000822":null}}


id: GO:0061817
data:
  {"annotated_genes":["SJAG_01437","SJAG_04417","SJAG_00053","SJAG_01564","SJAG_03247","SJAG_01168","SJAG_03170","SJAG_02626","SJAG_04413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60253,61460,61963,71759,90370,91449,97446,111679,118189],"is_not":false,"summary":null,"term":"GO:0061817"}]},"cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers.","definition_xrefs":["PMID:26877082","PMID:27875684","GOC:vw","PMID:23237950","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0008150","GO:0140056","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-plasma membrane tethering","type":"exact"}],"termid":"GO:0061817","terms_by_termid":{"GO:0061817":null}}


id: PBO:0052971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 2","termid":"PBO:0052971"}


id: GO:0002926
data:
  {"annotated_genes":["SJAG_00235","SJAG_01418","SJAG_00579","SJAG_03677","SJAG_04756","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72192,79696,100575,110169,113991,118806],"is_not":false,"summary":null,"term":"GO:0002926"}]},"cv_name":"biological_process","definition":"The process whereby a wobble base uridine residue in a tRNA is modified to 5-methoxycarbonylmethyl-2-thiouridine.","definition_xrefs":["PMID:22768388","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00579":null,"SJAG_01418":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mcm5 modification","type":"exact"},{"name":"mcm5s2U34 biosynthesis","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"}],"termid":"GO:0002926","terms_by_termid":{"GO:0002926":null}}


id: GO:1902642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:22562153","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902642"}


id: PBO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.-","termid":"PBO:0001791"}


id: MONDO:0100405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Non-KMT2A MLLT10 rearrangement positive. (An indication that a cytogenetic rearrangement involving MLLT10 but not involving KMT2A was detected in a sample.)","definition_xrefs":["NCIT:C168771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, Non-KMT2A MLLT10 rearrangement positive","synonyms":[{"name":"AML, Non-KMT2A MLLT10 Rearrangement","type":"exact"},{"name":"AML, Non-KMT2A MLLT10 rearrangement positive","type":"exact"},{"name":"AML, Non-MLL MLLT10 Rearrangement","type":"exact"},{"name":"AML, Non-MLL MLLT10 Rearrangement Positive","type":"exact"}],"termid":"MONDO:0100405","xrefs":{"Monarch":{"xref_id":"0100405"}}}


id: GO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lysosomal-enzyme D-mannose = UMP + lysosomal-enzyme N-acetyl-D-glucosaminyl-phospho-D-mannose.","definition_xrefs":["EC:2.7.8.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.8.17-RXN","RHEA:13581"],"synonyms":[{"name":"N-acetylglucosaminyl phosphotransferase activity","type":"related"},{"name":"N-acetylglucosaminylphosphotransferase activity","type":"related"},{"name":"UDP-GlcNAc:glycoprotein N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:lysosomal-enzyme N-acetylglucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:glycoprotein N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:glycoprotein N-acetylglucosaminyl-1-phosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"lysosomal enzyme precursor acetylglucosamine-1-phosphotransferase activity","type":"related"}],"termid":"GO:0003976"}


id: MONDO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial sclerosis","secondary_identifiers":["Orphanet:93220"],"termid":"MONDO:0019656","xrefs":{"Monarch":{"xref_id":"0019656"}}}


id: GO:0080077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a trihydroxyferuloyl spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080077"}


id: MONDO:0012385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondrodysplasia with cone-shaped epiphyses, normal hair, and normal hands","secondary_identifiers":["UMLS:C1864944","MEDGEN:355877","OMIM:609989","MESH:C537354"],"synonyms":[{"name":"cupped metaphyses and cone-Shaped epiphyses without alopecia or brachydactyly","type":"related"},{"name":"metaphyseal chondrodysplasia with cone-shaped epiphyses, normal hair, and normal hands","type":"exact"}],"termid":"MONDO:0012385","xrefs":{"Monarch":{"xref_id":"0012385"}}}


id: PBO:0084308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I-SceI DNA endonuclease; encoded by the mitochondrial group I intron of the 21S_rRNA gene; mediates gene conversion that propagates the intron into intron-less copies of the 21S_rRNA gene","termid":"PBO:0084308"}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: FYPO:0006201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of an adenine biosynthetic process is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of adenine biosynthetic process","synonyms":[{"name":"abnormal regulation of adenine anabolism","type":"exact"},{"name":"abnormal regulation of adenine biosynthesis","type":"exact"},{"name":"abnormal regulation of adenine biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of adenine biosynthetic process during vegetative growth","type":"exact"},{"name":"abnormal regulation of adenine formation","type":"exact"},{"name":"abnormal regulation of adenine synthesis","type":"exact"}],"termid":"FYPO:0006201"}


id: PBO:0034184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_with","termid":"PBO:0034184"}


id: PBO:0082903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallo-di-peptidase; forms a complex with Dug2p and Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p); human homolog CNDP2 can complement yeast dug1 mutant","termid":"PBO:0082903"}


id: MONDO:0006629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninflammatory degenerative disease of the hip joint which usually appears in late middle or old age. It is characterized by growth or maturational disturbances in the femoral neck and head, as well as acetabular dysplasia. A dominant symptom is pain on weight-bearing or motion.","definition_xrefs":["MESH:D015207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, hip","secondary_identifiers":["EFO:1000786","NCIT:C34876","MEDGEN:14530","UMLS:C0029410"],"synonyms":[{"name":"hip osteoarthritis","type":"exact"}],"termid":"MONDO:0006629","xrefs":{"Monarch":{"xref_id":"0006629"}}}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: PBO:0069587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 861, pseudogene","termid":"PBO:0069587"}


id: PBO:0079536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveal autoantigen with coiled-coil domains and ankyrin repeats","termid":"PBO:0079536"}


id: PBO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 5","termid":"PBO:0062186"}


id: MONDO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema without monoclonal gammopathy is a form of atypical lichen myxedematosus, characterized by a generalized sclerodermoid infiltration of skin studded with multiple, firm papules of 1-3 mm in diameter involving face (leonine appearance), trunk, and limbs, without monoclonal gammopathy. The involvement of the face can be missing and pruritus may be prominent.","definition_xrefs":["Orphanet:90400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema without monoclonal gammopathy","secondary_identifiers":["UMLS:C5681463","GARD:19144","MEDGEN:1843341"],"termid":"MONDO:0019585","xrefs":{"Monarch":{"xref_id":"0019585"}}}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: PBO:0085311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate phosphatase, converts phosphatidate to diacylglycerol; App1p, Pah1p, Dpp1p, and Lpp1p are responsible for all the phosphatidate phosphatase activity; component of cortical actin patches; interacts with components of endocytic pathway","termid":"PBO:0085311"}


id: PR:C6Y4A3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit K, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.10c","synonyms":[{"name":"Spom972h-atp19","type":"exact"}],"termid":"PR:C6Y4A3"}


id: PBO:0109952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 member A","termid":"PBO:0109952"}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["MEDGEN:688117","SCTID:128128003","UMLS:C1263847"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: GO:0032638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-9 production","secondary_identifiers":["GO:0072607","GO:0042229"],"synonyms":[{"name":"IL-9 production","type":"exact"},{"name":"interleukin-9 biosynthetic process","type":"narrow"},{"name":"interleukin-9 secretion","type":"narrow"}],"termid":"GO:0032638"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: MONDO:0003604
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing pituitary gland tumor, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C7047"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"functioning endocrine neoplasm","termid":"MONDO:0021120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning pituitary gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:163414","DOID:5716","UMLS:C0851693","ICD9:237.0","SCTID:448148000"],"synonyms":[{"name":"functioning endocrine neoplasm of pituitary gland","type":"exact"},{"name":"functioning pituitary gland neoplasm","type":"exact"},{"name":"functioning pituitary neoplasm","type":"exact"},{"name":"functioning pituitary tumor","type":"related"},{"name":"functioning pituitary tumour","type":"related"},{"name":"growth hormone producing pituitary tumour","type":"related"},{"name":"hormone producing pituitary cancer","type":"related"},{"name":"hormone producing pituitary neoplasm","type":"exact"},{"name":"pituitary gland functioning endocrine neoplasm","type":"exact"},{"name":"pituitary neoplasms, hormone producing","type":"exact"},{"name":"pituitary tumors, hormone producing","type":"exact"},{"name":"secretory pituitary tumor","type":"related"},{"name":"secretory pituitary tumour","type":"related"},{"name":"somatotropinoma","type":"related"}],"termid":"MONDO:0003604","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003604"}}}


id: GO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex which, in Drosophila, is a heterohexamer of three subunits, alpha, beta and gamma. The complex is thought to store amino acids for synthesis of adult proteins.","definition_xrefs":["GOC:jl","PMID:6781759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"larval serum protein complex","termid":"GO:0005616"}


id: GO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}


id: PBO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c","termid":"PBO:0015710"}


id: PBO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCDC55 ortholog","termid":"PBO:0002858"}


id: PBO:0081297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 77","termid":"PBO:0081297"}


id: MONDO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arterial intima.","definition_xrefs":["NCIT:C34581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endarteritis","secondary_identifiers":["SCTID:33806008","MEDGEN:41777","MESH:D004692","UMLS:C0014100"],"synonyms":[{"name":"Endarteritides","type":"related"},{"name":"endarteritis","type":"exact"},{"name":"inflammation of tunica intima of artery","type":"exact"},{"name":"tunica intima of artery inflammation","type":"exact"}],"termid":"MONDO:0043576","xrefs":{"Monarch":{"xref_id":"0043576"}}}


id: PBO:0054957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2371","termid":"PBO:0054957"}


id: MONDO:0016779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by polyhydramnios (mostly due to placentomegaly), fetal macrosomia, abdominal wall defects, skeletal abnormalities (including bell-shaped thorax, coat-hanger appearance of the ribs and decreased mid to wide thorax diameter ratio in infancy), feeding difficulties and impaired swallowing, dysmorphic features (hairy forehead, full cheeks, protruding philtrum, micrognathia), developmental delay and intellectual disability. Additional features may include kyphoskoliosis, joint contractures, diastasis recti, muscular hypotonia. There is increased risk of hepatoblastoma.","definition_xrefs":["Orphanet:254519"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 imprinting defect","termid":"MONDO:0100499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","secondary_identifiers":["MEDGEN:1830421","UMLS:C5779872","DOID:0111712","GARD:17219"],"synonyms":[{"name":"Kagami-Ogata syndrome","type":"exact"},{"name":"MCA due to 14q32.2 maternally expressed gene defect","type":"exact"}],"termid":"MONDO:0016779","xrefs":{"Monarch":{"xref_id":"0016779"}}}


id: MONDO:0007900
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86428],"is_not":false,"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the PLCD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pachyonychia congenita","termid":"MONDO:0016471"},{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0544855","ICD9:703.8","MESH:C537289","GARD:2555","OMIM:151600","SCTID:74102009","DOID:0080081","MEDGEN:107463"],"synonyms":[{"name":"Gorlin Bushkell Jensen syndrome","type":"related"},{"name":"NDNC3","type":"related"},{"name":"PLCD1 inherited isolated nail anomaly","type":"exact"},{"name":"inherited isolated nail anomaly caused by mutation in PLCD1","type":"exact"},{"name":"leukonychia Striatus","type":"related"},{"name":"leukonychia punctata","type":"related"},{"name":"leukonychia totalis and/or partialis","type":"related"},{"name":"leukonychia totalis multiple sebaceous cysts renal calculi","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3, (leukonychia)","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, type 3","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 3","type":"exact"},{"name":"porcelain nails","type":"related"}],"termid":"MONDO:0007900","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0007900"}}}


id: GO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-(1->4)-beta-D-glucosyl-R + UDP-D-galactose = D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.179","RHEA:18413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lactosylceramide beta-1,3-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04431","MetaCyc:2.4.1.179-RXN"],"synonyms":[{"name":"UDP-galactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lactosylceramide beta1->3-galactosyltransferase activity","type":"related"}],"termid":"GO:0047240"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: PBO:0077686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 15","termid":"PBO:0077686"}


id: PR:000044700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044700"}


id: GO:0140209
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93740,93741],"is_not":false,"summary":null,"term":"GO:0140209"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across the endoplasmic reticulum membrane, into the endoplasmic reticulum.","definition_xrefs":["PMID:11886869","PMID:29529046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc ion import across endoplasmic reticulum","type":"exact"},{"name":"zinc ion import into ER","type":"exact"},{"name":"zinc(2+) import across endoplasmic reticulum","type":"exact"},{"name":"zinc(2+) import into endoplasmic reticulum","type":"exact"}],"termid":"GO:0140209","terms_by_termid":{"GO:0140209":null}}


id: GO:0008870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a beta-D-galactoside = CoA + a 6-acetyl-beta-D-galactoside.","definition_xrefs":["EC:2.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"galactoside O-acetyltransferase activity","secondary_identifiers":["MetaCyc:GALACTOACETYLTRAN-RXN","RHEA:15713"],"synonyms":[{"name":"acetyl-CoA:beta-D-galactoside 6-acetyltransferase activity","type":"related"},{"name":"galactoside acetyltransferase activity","type":"related"},{"name":"thiogalactoside acetyltransferase activity","type":"related"},{"name":"thiogalactoside transacetylase activity","type":"related"}],"termid":"GO:0008870"}


id: PBO:0052331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671 antisense RNA 1","termid":"PBO:0052331"}


id: GO:0102975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol acetate + NADP = versiconal hemiacetal acetate + NADPH.","definition_xrefs":["RHEA:35695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"versiconal hemiacetal acetate reductase activity","secondary_identifiers":["MetaCyc:RXN-9490"],"termid":"GO:0102975"}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: PBO:0042636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Y-linked 11 pseudogene","termid":"PBO:0042636"}


id: PBO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 8","termid":"PBO:0070855"}


id: PBO:0077076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAM1 antisense RNA 1","termid":"PBO:0077076"}


id: GO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIE class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIE-class binding (obsolete GO:0001088)","synonyms":[{"name":"TFIIE-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001088"}


id: MONDO:1012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, water buffalo","secondary_identifiers":["OMIA:001119-89462"],"termid":"MONDO:1012298","xrefs":{"Monarch":{"xref_id":"1012298"}}}


id: GO:0051011
data:
  {"annotated_genes":["SJAG_02609","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71011,71531],"is_not":false,"summary":null,"term":"GO:0051011"}]},"cv_name":"molecular_function","definition":"Binding to the minus end of a microtubule.","definition_xrefs":["PMID:14557818","GOC:ai","PMID:14614826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02609":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008017","GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"microtubule minus-end binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051011","terms_by_termid":{"GO:0051011":null}}


id: GO:2001249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nitrogen utilization","termid":"GO:0045847"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"is_a","term_name":"regulation of ammonia assimilation cycle","termid":"GO:2001248"},{"relation_name":"negatively_regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of ammonia assimilation cycle","synonyms":[{"name":"negative regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"negative regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001249"}


id: PBO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp21 (predicted)","termid":"PBO:0003266"}


id: PR:O94359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.12c gene.","definition_xrefs":["UniProtKB:O94359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C428.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.12c","synonyms":[{"name":"Spom972h-SPBC428.12c","type":"exact"}],"termid":"PR:O94359"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: PBO:0064040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 74","termid":"PBO:0064040"}


id: MONDO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the inferolateral wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inferolateral myocardial infarct","secondary_identifiers":["UMLS:C3537017","MEDGEN:760761","DOID:5852"],"termid":"MONDO:0003676","xrefs":{"Monarch":{"xref_id":"0003676"}}}


id: PBO:0051173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-62 (pseudogene)","termid":"PBO:0051173"}


id: PBO:0086318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to Emp24p and Erv25p; member of the p24 family involved in ER to Golgi transport","termid":"PBO:0086318"}


id: GO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["UniProtKB-KW:KW-0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis","secondary_identifiers":["Wikipedia:Cytolysis"],"synonyms":[{"name":"autolysin activity","type":"related"},{"name":"bacteriocin activity","type":"related"},{"name":"bacteriolytic toxin activity","type":"related"},{"name":"holin","type":"related"},{"name":"lysin activity","type":"related"},{"name":"lysis","type":"broad"},{"name":"necrosis","type":"related"}],"termid":"GO:0019835"}


id: PBO:0047509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 1","termid":"PBO:0047509"}


id: PR:Q1MTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16D10.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTN8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone of rpl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.01c","synonyms":[{"name":"Spom972h-SPBC16D10.01c","type":"exact"}],"termid":"PR:Q1MTN8"}


id: PBO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPUL2-BSCL2 readthrough (NMD candidate)","termid":"PBO:0050449"}


id: MONDO:0023031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis acral with facial and genital abnormalities (obsolete MONDO:0023031)","termid":"MONDO:0023031","xrefs":{"Monarch":{"xref_id":"0023031"}}}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: SO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A major type of spliceosomal intron spliced by the U2 spliceosome, that includes U1, U2, U4/U6 and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2_intron","synonyms":[{"name":"U2 intron","type":"exact"}],"termid":"SO:0000184"}


id: FYPO:0006845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"normal H3-K9 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0006845"}


id: MONDO:0007343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital digital clubbing is a rare genodermatosis disorder characterized by enlargement of the terminal segments of fingers and toes with thickened nails without any other abnormality.","definition_xrefs":["Orphanet:217059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital digital clubbing","secondary_identifiers":["icd11.foundation:130631845","GARD:17117","MEDGEN:576901","OMIM:119900","UMLS:C0345408"],"synonyms":[{"name":"acropachy, hereditary","type":"related"},{"name":"clubbing of digits","type":"related"},{"name":"digital clubbing, isolated congenital","type":"related"},{"name":"isolated congenital acropachy","type":"exact"},{"name":"isolated congenital nail clubbing","type":"exact"}],"termid":"MONDO:0007343","xrefs":{"Monarch":{"xref_id":"0007343"}}}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_02379","SJAG_04509","SJAG_00514","SJAG_03453","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93448,90811,89824,111381,87849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: PBO:0109631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B (pseudogene)","termid":"PBO:0109631"}


id: MONDO:0010652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-seizures-psoriasis syndrome has been described in four male cousins. The mode of inheritance is thought to be X-linked recessive.","definition_xrefs":["Orphanet:3052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-seizures-psoriasis syndrome","secondary_identifiers":["UMLS:C3501539","OMIM:309480","GARD:5238","MEDGEN:501947","SCTID:719810000","MESH:C536978"],"synonyms":[{"name":"Tranebjaerg Svejgaard syndrome","type":"related"},{"name":"Tranebjaerg-Svejgaard syndrome","type":"exact"},{"name":"X-linked intellectual disability - seizures - psoriasis","type":"related"},{"name":"X-linked intellectual disability associated with psoriasis","type":"related"},{"name":"X-linked mental retardation associated with psoriasis","type":"related"},{"name":"intellectual disability X-linked, Tranebjaerg type seizures and psoriasis","type":"related"},{"name":"intellectual disability and psoriasis","type":"related"},{"name":"mental retardation X-linked, Tranebjaerg type seizures and psoriasis","type":"related"},{"name":"mental retardation and psoriasis","type":"related"}],"termid":"MONDO:0010652","xrefs":{"Monarch":{"xref_id":"0010652"}}}


id: MONDO:0800487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any idiopathic generalized epilepsy syndrome that has a variable-age onset.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"variable-age onset epilepsy syndrome","termid":"MONDO:0100036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800487","xrefs":{"Monarch":{"xref_id":"0800487"}}}


id: MONDO:0044726
data:
  {"annotated_genes":["SJAG_04260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85395],"is_not":false,"summary":null,"term":"MONDO:0044726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of zinc metabolism","termid":"MONDO:0017764"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0005559"],"is_obsolete":false,"name":"psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617595","MEDGEN:1621949","GARD:17943","UMLS:C4539828","Orphanet:505242"],"synonyms":[{"name":"BILAPES","type":"related"},{"name":"Birk-Landau-Perez syndrome","type":"related"},{"name":"Cerebrorenal syndrome, Perez type","type":"exact"}],"termid":"MONDO:0044726","terms_by_termid":{"MONDO:0044726":null},"xrefs":{"Monarch":{"xref_id":"0044726"}}}


id: PBO:0040819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3 interacting domain death agonist","termid":"PBO:0040819"}


id: PBO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport (predicted)","termid":"PBO:0005153"}


id: MOD:00061
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-acetyl-L-threonine.","definition_xrefs":["RESID:AA0052","PubMed:12175151","PubMed:2106685","PubMed:11857757","PubMed:15350136","PubMed:14730666","PubMed:6997045","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-acetamido-3-hydroxybutanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N-acetylthreonine","type":"exact"},{"name":"N-acetyl-L-threonine","type":"exact"},{"name":"N-acetylated L-threonine","type":"exact"},{"name":"N-acetylthreonine","type":"exact"},{"name":"N-methylcarbonylthreonine","type":"exact"},{"name":"NAcThr","type":"exact"}],"termid":"MOD:00061"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: PBO:0062907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxytocin receptor","termid":"PBO:0062907"}


id: PBO:0056934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1-1 host gene","termid":"PBO:0056934"}


id: GO:0021603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve formation","termid":"GO:0021603"}


id: PBO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated Cut3 residues are located along the interface with Cut14","termid":"PBO:0018265"}


id: PBO:0065904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab acceptor 1","termid":"PBO:0065904"}


id: FYPO:0005803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the lateral part of the cell occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell side","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell side during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell side during vegetative growth","type":"exact"},{"name":"decreased rate of protein movement within plasma membrane at lateral part of cell","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell side","type":"exact"},{"name":"slow protein movement within plasma membrane at cell side","type":"exact"}],"termid":"FYPO:0005803"}


id: PATO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark violet","termid":"PATO:0001705"}


id: PBO:0069151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 402, pseudogene","termid":"PBO:0069151"}


id: PR:Q10349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoserine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.07","secondary_identifiers":["UniProtKB:Q10349"],"synonyms":[{"name":"PSAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSAT1","type":"exact"},{"name":"phosphohydroxythreonine aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10349"}


id: GO:0046173
data:
  {"annotated_genes":["SJAG_00880","SJAG_03409","SJAG_00321","SJAG_00409","SJAG_02305","SJAG_04178","SJAG_02429","SJAG_00244","SJAG_03275","SJAG_02321","SJAG_01012","SJAG_01057","SJAG_02706","SJAG_03098","SJAG_03739","SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93946,106513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[65774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[93352,70840,71089,74671,75690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[96887,106002,109728,78868,73635,76815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[108541,69745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_00409":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_03409":null,"SJAG_03739":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol biosynthetic process","type":"exact"},{"name":"polyol anabolism","type":"exact"},{"name":"polyol biosynthesis","type":"exact"},{"name":"polyol formation","type":"exact"},{"name":"polyol synthesis","type":"exact"}],"termid":"GO:0046173","terms_by_termid":{"GO:0006021":null,"GO:0006114":null,"GO:0006729":null,"GO:0032958":null,"GO:0046512":null}}


id: GO:1904206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["PMID:23470307","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"positively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle hypertrophy","synonyms":[{"name":"activation of skeletal muscle hypertrophy","type":"narrow"},{"name":"up regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"up-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"upregulation of skeletal muscle hypertrophy","type":"exact"}],"termid":"GO:1904206"}


id: MONDO:0009207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V and factor VIII, combined deficiency of, with normal protein C and protein C inhibitor","secondary_identifiers":["MEDGEN:346462","GARD:18631","OMIM:227310","UMLS:C1856882"],"synonyms":[{"name":"factor 5 and Factor VIII, combined deficiency Of, with normal Protein C and Protein C inhibitor","type":"related"},{"name":"factor V and Factor VIII, combined deficiency of, with normal protein c and Protein C inhibitor","type":"exact"}],"termid":"MONDO:0009207","xrefs":{"Monarch":{"xref_id":"0009207"}}}


id: GO:0140679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na(in) = ADP + phosphate + Na(out).","definition_xrefs":["PMID:9106203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type sodium transporter activity","secondary_identifiers":["TC:3.A.1.115.1","EC:7.2.2.4"],"termid":"GO:0140679"}


id: GO:0045615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"is_a","term_name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"},{"relation_name":"positively_regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmatocyte differentiation","synonyms":[{"name":"activation of plasmatocyte differentiation","type":"narrow"},{"name":"stimulation of plasmatocyte differentiation","type":"narrow"},{"name":"up regulation of plasmatocyte differentiation","type":"exact"},{"name":"up-regulation of plasmatocyte differentiation","type":"exact"},{"name":"upregulation of plasmatocyte differentiation","type":"exact"}],"termid":"GO:0045615"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: MONDO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive nodal or extranodal mature (peripheral) T-cell lymphomas that do not belong to the better defined entities of the remainder of mature T-cell lymphomas. This category includes the following variants: lymphoepithelioid cell variant (Lennert's lymphoma), follicular variant, and T-zone variant.","definition_xrefs":["NCIT:C4340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"peripheral T-cell lymphoma, not otherwise specified","secondary_identifiers":["ONCOTREE:PTCL","EFO:0000211","icd11.foundation:855224800","NANDO:2200028"],"synonyms":[{"name":"PTCL","type":"related"},{"name":"peripheral T-cell lymphoma, not otherwise specified","type":"exact"}],"termid":"MONDO:0004964","xrefs":{"Monarch":{"xref_id":"0004964"}}}


id: PBO:0017619
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Stress Seventy","termid":"PBO:0017619"}


id: PBO:0034574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_stable_microtubule_bundle","termid":"PBO:0034574"}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["UniProtKB:Q9P6L5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PBO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2 (predicted)","termid":"PBO:0005454"}


id: PBO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4 (predicted)","termid":"PBO:0001567"}


id: PBO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport","termid":"PBO:0031219"}


id: PBO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mdm12","termid":"PBO:0090299"}


id: PBO:0059730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 4","termid":"PBO:0059730"}


id: MONDO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant tumor that originates from the surface epithelium of the ovary. It is composed of epithelial cells and stroma. Representative examples of benign tumors include serous cystadenoma, mucinous cystadenoma, and benign Brenner tumor. Representative examples of borderline tumors include serous surface papillary tumor, mucinous adenofibroma, and borderline Brenner tumor. Representative examples of malignant tumors include serous adenocarcinoma, mucinous adenocarcinoma, endometrioid adenocarcinoma, and malignant Brenner tumor.","definition_xrefs":["NCIT:C4381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian epithelial tumor","secondary_identifiers":["MEDGEN:90969","ONCOTREE:OVT","UMLS:C0341823","SCTID:237057005","DOID:2152","ICD9:239.5"],"synonyms":[{"name":"OVT","type":"related"},{"name":"epithelial neoplasm of ovary","type":"exact"},{"name":"epithelial neoplasm of the ovary","type":"exact"},{"name":"epithelial tumor of ovary","type":"exact"},{"name":"epithelial tumor of the ovary","type":"exact"},{"name":"epithelial tumour of ovary","type":"exact"},{"name":"epithelial tumour of the ovary","type":"exact"},{"name":"ovarian epithelial tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumour","type":"exact"},{"name":"ovarian surface-epithelial stromal neoplasm","type":"exact"},{"name":"ovary epithelial cancer","type":"related"},{"name":"ovary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0002229","xrefs":{"Monarch":{"xref_id":"0002229"}}}


id: GO:0019568
data:
  {"annotated_genes":["SJAG_04660","SJAG_03958","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94989,95725,101184],"is_not":false,"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"arabinose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose breakdown","type":"exact"},{"name":"arabinose catabolism","type":"exact"},{"name":"arabinose degradation","type":"exact"}],"termid":"GO:0019568","terms_by_termid":{"GO:0019568":null}}


id: MONDO:1011127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular regression syndrome, non-human animal","termid":"MONDO:1010281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, horse","secondary_identifiers":["OMIA:001535-9796"],"termid":"MONDO:1011127","xrefs":{"Monarch":{"xref_id":"1011127"}}}


id: PBO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nbs1-Interacting Protein 1","termid":"PBO:0005473"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: PBO:0056107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 2","termid":"PBO:0056107"}


id: MONDO:0020805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of basal cells that remains localized and does not metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal cell neoplasm","termid":"MONDO:0020799"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign basal cell neoplasm","secondary_identifiers":["UMLS:C0474802","MEDGEN:96885"],"synonyms":[{"name":"benign basal cell tumor","type":"exact"},{"name":"benign basal cell tumour","type":"exact"}],"termid":"MONDO:0020805","xrefs":{"Monarch":{"xref_id":"0020805"}}}


id: PBO:0073714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 1","termid":"PBO:0073714"}


id: MONDO:0010440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, X-linked 4","secondary_identifiers":["MEDGEN:162886","UMLS:C0795888","OMIM:300830"],"synonyms":[{"name":"AUTSX4","type":"related"},{"name":"X-linked susceptibility to autism-4","type":"related"},{"name":"autism, susceptibility to, X-linked 4","type":"exact"},{"name":"autism, susceptibility to, X-linked 4, X-linked recessive","type":"exact"},{"name":"autism, susceptibility to, X-linked type 4","type":"exact"},{"name":"chromosome Xp22 deletion syndrome","type":"related"},{"name":"susceptibility to X-linked autism 4","type":"related"},{"name":"susceptibility to autism, X-linked","type":"related"}],"termid":"MONDO:0010440","xrefs":{"Monarch":{"xref_id":"0010440"}}}


id: PBO:0016924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase Bud32 (predicted)","termid":"PBO:0016924"}


id: MOD:01122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dCytidinyl","termid":"MOD:01122"}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: GO:0019907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin-dependent kinase activating kinase complex capable of activating cyclin-dependent kinases by threonine phosphorylation, thus regulating cell cycle progression. consists of a kinase, cyclin and optional assembly factors, in human CDK7, CCNH and MNAT1. CAK activity is itself regulated throughout the cell cycle by T-loop phosphorylation of its kinase component (CDK7 in human). Phosphorylation of serine residues during mitosis inactivates the enzyme. Also capable of CAK phosphorylating the carboxyl-terminal domain (CTD) of RNA polymerase II and other transcription activating proteins, as part of the general transcription factor TFIIH.","definition_xrefs":["GOC:bhm","PMID:8752210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"},{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase holoenzyme complex","synonyms":[{"name":"CAK complex","type":"exact"},{"name":"CDK-activating kinase complex","type":"exact"}],"termid":"GO:0019907"}


id: PBO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D","termid":"PBO:0043785"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: GO:0008310
data:
  {"annotated_genes":["SJAG_02908","SJAG_05373","SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74124,88508,101147],"is_not":false,"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:22562358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0003674","GO:0003824","GO:0004527","GO:0016787"],"is_obsolete":false,"name":"single-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.1","MetaCyc:3.1.11.1-RXN"],"synonyms":[{"name":"exonuclease I activity","type":"narrow"},{"name":"single-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 3'-5' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008310","terms_by_termid":{"GO:0008310":null}}


id: PBO:0111910
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0111910"}


id: PATO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetism which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"magnetic","termid":"PATO:0001685"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased magnetism","synonyms":[{"name":"low magnetism","type":"exact"}],"termid":"PATO:0001684"}


id: PBO:0111851
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0111851"}


id: PBO:0063772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 3","termid":"PBO:0063772"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: PBO:0063349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 3","termid":"PBO:0063349"}


id: MONDO:0014513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the LMOD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 10","secondary_identifiers":["UMLS:C4015360","OMIM:616165","DOID:0110931","GARD:16066","MEDGEN:863797"],"synonyms":[{"name":"LMOD3 nemaline myopathy","type":"exact"},{"name":"NEM10","type":"exact"},{"name":"nemaline myopathy 10","type":"exact"},{"name":"nemaline myopathy caused by mutation in LMOD3","type":"exact"},{"name":"nemaline myopathy type 10","type":"exact"}],"termid":"MONDO:0014513","xrefs":{"Monarch":{"xref_id":"0014513"}}}


id: MONDO:0013289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the BLNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 4, autosomal recessive","secondary_identifiers":["UMLS:C3150752","DOID:0060027","MEDGEN:462102","GARD:15674","OMIM:613502"],"synonyms":[{"name":"AGM4","type":"exact"},{"name":"B cell linker protein deficiency","type":"exact"},{"name":"B-cell linker protein deficiency","type":"exact"},{"name":"BLNK autosomal agammaglobulinemia","type":"exact"},{"name":"BLNK deficiency","type":"exact"},{"name":"agammaglobulinemia 4","type":"exact"},{"name":"agammaglobulinemia 4, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to Blnk defect","type":"exact"},{"name":"autosomal agammaglobulinemia caused by mutation in BLNK","type":"exact"}],"termid":"MONDO:0013289","xrefs":{"Monarch":{"xref_id":"0013289"}}}


id: MONDO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Jaccoud syndrome","secondary_identifiers":["DOID:13080","UMLS:C0152084","SCTID:84801008","MEDGEN:508877","ICD9:714.4"],"synonyms":[{"name":"Jaccoud syndrome","type":"exact"},{"name":"Jaccoud's syndrome","type":"exact"}],"termid":"MONDO:0001629","xrefs":{"Monarch":{"xref_id":"0001629"}}}


id: FYPO:0006654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of G-quadruplex DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal G-quadruplex DNA binding","synonyms":[{"name":"normal G-quartet DNA binding","type":"exact"},{"name":"normal G4 DNA binding","type":"exact"}],"termid":"FYPO:0006654"}


id: PBO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Cdc10","termid":"PBO:0004192"}


id: GO:0100033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fungal-type cell wall biogenesis.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter (obsolete GO:0100033)","termid":"GO:0100033"}


id: GO:0042284
data:
  {"annotated_genes":["SJAG_01057","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72375,74081],"is_not":false,"summary":null,"term":"GO:0042284"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 ferrocytochrome b5 + O2 + 2 H+ -> a sphingosine ceramide (aka (4E)-sphing-4-enine ceramide) + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:46544","PMID:12417141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sphingolipid delta-4 desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-428259","EC:1.14.19.17"],"synonyms":[{"name":"delta-4 sphingolipid desaturase activity","type":"exact"}],"termid":"GO:0042284","terms_by_termid":{"GO:0042284":null}}


id: GO:0019156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages in glycogen, amylopectin and their beta-limits dextrins.","definition_xrefs":["EC:3.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"isoamylase activity","secondary_identifiers":["MetaCyc:3.2.1.68-RXN"],"synonyms":[{"name":"debranching enzyme activity","type":"broad"},{"name":"glycogen alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0019156"}


id: MONDO:0011161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-specific antigen 1","secondary_identifiers":["UMLS:C1420425","MEDGEN:244171","OMIM:601876"],"synonyms":[{"name":"SSFA1","type":"related"},{"name":"fertilisation antigen 1","type":"related"},{"name":"fertilization antigen 1","type":"related"},{"name":"sperm-specific antigen 1","type":"exact"},{"name":"sperm-specific antigen type 1","type":"exact"}],"termid":"MONDO:0011161","xrefs":{"Monarch":{"xref_id":"0011161"}}}


id: PBO:0074588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 4","termid":"PBO:0074588"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: MONDO:0011278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bile duct cysts (obsolete MONDO:0011278)","termid":"MONDO:0011278","xrefs":{"Monarch":{"xref_id":"0011278"}}}


id: GO:1904114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["PMID:25717181","GO_REF:0000058","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of muscle filament sliding","synonyms":[{"name":"activation of muscle filament sliding","type":"narrow"},{"name":"up regulation of muscle filament sliding","type":"exact"},{"name":"up-regulation of muscle filament sliding","type":"exact"},{"name":"upregulation of muscle filament sliding","type":"exact"}],"termid":"GO:1904114"}


id: GO:1901362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic cyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound biosynthetic process (obsolete GO:1901362)","synonyms":[{"name":"organic cyclic compound anabolism","type":"exact"},{"name":"organic cyclic compound biosynthesis","type":"exact"},{"name":"organic cyclic compound formation","type":"exact"},{"name":"organic cyclic compound synthesis","type":"exact"}],"termid":"GO:1901362"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: SO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Imprinted genes are epigenetically modified genes that are expressed monoallelically according to their parent of origin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"},{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_imprinted","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Genomic_imprinting"],"synonyms":[{"name":"genomically imprinted","type":"exact"},{"name":"imprinted","type":"broad"}],"termid":"SO:0000134"}


id: PBO:0040684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 2","termid":"PBO:0040684"}


id: SO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mannosyl_queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl_queuosine","secondary_identifiers":["RNAMOD:046"],"synonyms":[{"name":"manQ","type":"exact"},{"name":"mannosyl queuosine","type":"exact"},{"name":"mannosyl-queuosine","type":"exact"}],"termid":"SO:0001320"}


id: GO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-29 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-29 production","secondary_identifiers":["GO:0072632"],"synonyms":[{"name":"IL-29 production","type":"exact"},{"name":"IL29 production","type":"exact"},{"name":"interferon lambda 1 production","type":"exact"},{"name":"interleukin-29 secretion","type":"narrow"}],"termid":"GO:0072631"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: GO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060315"}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_03631","SJAG_02858","SJAG_03799","SJAG_03879","SJAG_03793","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72855,79502,92367,98099],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[100997,116154],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["PMID:25878052","PMID:26851544","GOC:di","PMID:25655284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: GO:0032978
data:
  {"annotated_genes":["SJAG_03633","SJAG_05302","SJAG_01405","SJAG_01917","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74357,78637,78212,78562,58175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into a lipid bilayer, e.g., the prokaryotic, mitochondrial, or chloroplast inner membrane, from the inner side.","definition_xrefs":["PMID:14739936","PMID:15473843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane from inner side","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"insertion of proteins into membrane from the inner side","type":"exact"}],"termid":"GO:0032978","terms_by_termid":{"GO:0032979":null}}


id: PBO:0090786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh1","termid":"PBO:0090786"}


id: MONDO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic disease of cats frequently associated with feline leukemia virus infection.","definition_xrefs":["MESH:D016582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, feline","synonyms":[{"name":"Feline leukaemia","type":"related"},{"name":"Feline leukemia","type":"related"},{"name":"Feline leukemias","type":"related"},{"name":"leukemias, Feline","type":"related"}],"termid":"MONDO:0025488","xrefs":{"Monarch":{"xref_id":"0025488"}}}


id: GO:0051102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA recombination.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA ligation involved in DNA recombination (obsolete GO:0051102)","synonyms":[{"name":"DNA ligation during DNA recombination","type":"related"}],"termid":"GO:0051102"}


id: GO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parathyroid hormone","synonyms":[{"name":"response to parathyroid hormone stimulus","type":"exact"}],"termid":"GO:0071107"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: PBO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 35","termid":"PBO:0050125"}


id: MONDO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leprosy is a chronic infectious disease affecting primarily the skin and peripheral nervous system.","definition_xrefs":["Orphanet:548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy","secondary_identifiers":["UMLS:C0023343","ICD10CM:A30","ICD9:030","ICD9:030.9","NCIT:C84824","icd11.foundation:149072669","NORD:1362","DOID:1024","GARD:6886","MEDGEN:6049","EFO:0001054","MedDRA:10024229","MESH:D007918","ICD9:030.8","SCTID:81004002"],"synonyms":[{"name":"Hansen disease","type":"exact"},{"name":"Hansen's disease","type":"exact"},{"name":"Mycobacterium leprae caused disease or disorder","type":"exact"},{"name":"Mycobacterium leprae disease or disorder","type":"exact"},{"name":"Mycobacterium leprae infectious disease","type":"exact"}],"termid":"MONDO:0005124","xrefs":{"Monarch":{"xref_id":"0005124"}}}


id: MONDO:1011512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, horse","secondary_identifiers":["OMIA:000411-9796"],"termid":"MONDO:1011512","xrefs":{"Monarch":{"xref_id":"1011512"}}}


id: PBO:0085194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine decarboxylase; catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; deletion decreases lifespan, and increases necrotic cell death and ROS generation","termid":"PBO:0085194"}


id: GO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: PBO:0017743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase (predicted), possibly riboflavin reductase","termid":"PBO:0017743"}


id: PBO:0041455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf67 antisense RNA 1","termid":"PBO:0041455"}


id: PBO:0053507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 491","termid":"PBO:0053507"}


id: PBO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 11","termid":"PBO:0050749"}


id: GO:0016763
data:
  {"annotated_genes":["SJAG_01974","SJAG_01661","SJAG_03775","SJAG_03167","SJAG_00694","SJAG_06284","SJAG_04713","SJAG_04709","SJAG_04747","SJAG_06634","SJAG_03881","SJAG_05228","SJAG_01359","SJAG_04354","SJAG_00827","SJAG_00683","SJAG_01859","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[72296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004044"},{"annotations":[65724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004048"},{"annotations":[78396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003879"},{"annotations":[61538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160205"},{"annotations":[93728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[75376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[75822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000107"},{"annotations":[116130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050144"},{"annotations":[73284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004588"},{"annotations":[79051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004731"},{"annotations":[77775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"},{"annotations":[58712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043399"},{"annotations":[72553,95769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008479"},{"annotations":[87419,91940,88406,114942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004845"},{"annotations":[93731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_00694":null,"SJAG_00827":null,"SJAG_01359":null,"SJAG_01661":null,"SJAG_01859":null,"SJAG_01974":null,"SJAG_03167":null,"SJAG_03708":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04747":null,"SJAG_05228":null,"SJAG_06284":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"pentosyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.-","Reactome:R-HSA-112265","Reactome:R-HSA-112266"],"synonyms":[{"name":"transferase activity, transferring pentosyl groups","type":"exact"}],"termid":"GO:0016763","terms_by_termid":{"GO:0000107":null,"GO:0000310":null,"GO:0003879":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004422":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0017061":null,"GO:0043399":null,"GO:0050144":null,"GO:0052657":null,"GO:0160205":null}}


id: PBO:0038565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 1, non-receptor tyrosine kinase","termid":"PBO:0038565"}


id: PBO:0073658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member A","termid":"PBO:0073658"}


id: GO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in esculin.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"esculin beta-glucosidase activity","termid":"GO:0080082"}


id: FYPO:0004227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"},{"relation_name":"is_a","term_name":"abnormal nucleosome binding","termid":"FYPO:0004225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased nucleosome binding","synonyms":[{"name":"reduced nucleosome binding","type":"exact"}],"termid":"FYPO:0004227"}


id: PBO:0057395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-3","termid":"PBO:0057395"}


id: PBO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.10","termid":"PBO:0000918"}


id: MONDO:1012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of glycogen metabolism that occurs in horses due to a mutation in the GYS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide storage myopathy, type 1, horse","secondary_identifiers":["OMIA:001158-9796"],"synonyms":[{"name":"PSSM1","type":"exact"},{"name":"polysaccharide storage myopathy, GYS1-related, horse","type":"exact"}],"termid":"MONDO:1012649","xrefs":{"Monarch":{"xref_id":"1012649"}}}


id: PBO:0066843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 143","termid":"PBO:0066843"}


id: MONDO:0021457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pleura.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pleura","secondary_identifiers":["NCIT:C3603","ICD9:212.4","MEDGEN:57806","icd11.foundation:2142393865","SCTID:92298003","UMLS:C0153955"],"synonyms":[{"name":"benign neoplasm of the pleura","type":"exact"},{"name":"benign pleural neoplasm","type":"exact"},{"name":"benign pleural tumor","type":"exact"},{"name":"benign pleural tumour","type":"exact"},{"name":"benign tumor of pleura","type":"exact"},{"name":"benign tumor of the pleura","type":"exact"},{"name":"benign tumour of pleura","type":"exact"},{"name":"benign tumour of the pleura","type":"exact"},{"name":"pleura benign neoplasm","type":"exact"}],"termid":"MONDO:0021457","xrefs":{"Monarch":{"xref_id":"0021457"}}}


id: GO:0010461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic ion by a channel that opens in response to a light stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"light-activated monoatomic ion channel activity","termid":"GO:0010461"}


id: GO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cyclase activity","termid":"GO:0031281"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase activator","type":"related"},{"name":"positive regulation of adenylyl cyclase activity","type":"exact"},{"name":"stimulation of adenylate cyclase activity","type":"narrow"},{"name":"up regulation of adenylate cyclase activity","type":"exact"},{"name":"up-regulation of adenylate cyclase activity","type":"exact"},{"name":"upregulation of adenylate cyclase activity","type":"exact"}],"termid":"GO:0045762"}


id: PBO:0082637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; similar to human ataxin-2","termid":"PBO:0082637"}


id: MONDO:0859191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliary, renal, neurologic, and skeletal syndrome","secondary_identifiers":["MEDGEN:1794200","OMIM:619534","UMLS:C5561990"],"termid":"MONDO:0859191","xrefs":{"Monarch":{"xref_id":"0859191"}}}


id: GO:0043259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-10 complex","synonyms":[{"name":"laminin-511 complex","type":"exact"}],"termid":"GO:0043259"}


id: PBO:0047812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N1","termid":"PBO:0047812"}


id: FYPO:0006255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of ribosomal footprint lengths in a cell includes more short footprints than wild type when the cell undergoes an endoplasmic reticulum unfolded protein response (UPR). Ribosomal footprints are RNA fragments protected by the ribosome, and normally range from 28-31 nucleotides long.","definition_xrefs":["PMID:28945192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome footprint size distribution","termid":"FYPO:0006254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response","synonyms":[{"name":"increased level of short ribosome footprints during ER unfolded protein response","type":"exact"},{"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response during mitotic cell cycle","type":"related"},{"name":"increased level of short ribosome footprints during endoplasmic reticulum unfolded protein response during vegetative growth","type":"exact"},{"name":"increased level of short ribosome footprints during erUPR","type":"exact"},{"name":"increased level of short ribosome footprints upon UPR induction","type":"exact"}],"termid":"FYPO:0006255"}


id: PBO:0075634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2D","termid":"PBO:0075634"}


id: GO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 23,24-dihydrocucurbitacin + NAD(P)+ = cucurbitacin + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cucurbitacin Delta23 reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:CUCURBITACIN-DELTA-23-REDUCTASE-RXN"],"synonyms":[{"name":"23,24-dihydrocucurbitacin:NAD(P)+ delta23-oxidoreductase activity","type":"related"},{"name":"NAD(P)H: cucurbitacin B delta23-oxidoreductase activity","type":"related"},{"name":"cucurbitacin D23-reductase activity","type":"exact"},{"name":"cucurbitacin delta(23) reductase activity","type":"exact"}],"termid":"GO:0047791"}


id: FYPO:0006043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of kinetochore sliding, i.e. the movement of a kinetochore along spindle microtubules, during mitotic chromosome recapture is increased.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"increased rate of kinetochore sliding during chromosome recapture","synonyms":[{"name":"increased rate of chromosome migration during chromosome recapture","type":"exact"},{"name":"increased rate of chromosome movement during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore migration during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding along kinetochore microtubule towards spindle pole body during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding during chromosome recapture during mitosis","type":"exact"},{"name":"increased rate of kinetochore sliding during chromosome recapture during vegetative growth","type":"exact"},{"name":"increased rate of kinetochore sliding during kinetochore retrieval","type":"exact"},{"name":"increased rate of kinetochore sliding during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"increased rate of kinetochore sliding during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"increased rate of kinetochore sliding during mitotic metaphase chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding during sister kinetochore recapture","type":"exact"},{"name":"increased rate of kinetochore sliding towards SPB during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding towards spindle pole body during chromosome recapture","type":"exact"}],"termid":"FYPO:0006043"}


id: GO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol phosphates, any phosphorylated form of ribitol, the pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol phosphate metabolic process","termid":"GO:0052647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribitol phosphate metabolic process","synonyms":[{"name":"ribitol phosphate metabolism","type":"exact"}],"termid":"GO:0052648"}


id: GO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["GOC:kd","InterPro:IPR000701"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (obsolete GO:0045281)","termid":"GO:0045281"}


id: PBO:0061618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4","termid":"PBO:0061618"}


id: GO:0051403
data:
  {"annotated_genes":["SJAG_04551","SJAG_03753","SJAG_03705","SJAG_04666","SJAG_04522","SJAG_01181","SJAG_02392","SJAG_05000","SJAG_04825","SJAG_01787","SJAG_00424","SJAG_01114","SJAG_00610","SJAG_03263","SJAG_03969"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110991,102146,92231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[107625,103803,118345,107060,95825,99440],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[102846,88038,89392,92386,117937,90731],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"A MAPK cascade that starts with the activation of a stress-activated MAP kinase cascade.","definition_xrefs":["PMID:15936270","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"is_a","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03753":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-450294"],"synonyms":[{"name":"MAPK11 cascade","type":"narrow"},{"name":"MAPK12 cascade","type":"narrow"},{"name":"MAPK13 cascade","type":"narrow"},{"name":"MAPK14 cascade","type":"related"},{"name":"SAPK cascade","type":"broad"},{"name":"stress-activated MAPK signaling pathway","type":"exact"},{"name":"stress-activated MAPK signalling pathway","type":"exact"},{"name":"stress-activated MAPKKK cascade","type":"exact"},{"name":"stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0051403","terms_by_termid":{"GO:0000196":null,"GO:1903138":null,"GO:1903139":null}}


id: GO:0018402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Chondroitin sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0208"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine (obsolete GO:0018402)","synonyms":[{"name":"protein-chondroitin sulphate linkage via chondroitin sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018402"}


id: GO:0009887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:dgh","ISBN:0721662544","GOC:go_curators","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ morphogenesis","synonyms":[{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009887"}


id: PR:P41890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scn3 gene.","definition_xrefs":["UniProtKB:P41890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut9-interacting protein scn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.13","synonyms":[{"name":"Spom972h-scn3","type":"exact"}],"termid":"PR:P41890"}


id: PBO:0088341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II essential light chain","termid":"PBO:0088341"}


id: GO:0006828
data:
  {"annotated_genes":["SJAG_03850","SJAG_04096","SJAG_04867","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108683,70517,61362,63826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"The directed movement of manganese (Mn) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"manganese ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006828","terms_by_termid":{"GO:0071421":null}}


id: PBO:0057309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-2","termid":"PBO:0057309"}


id: GO:2000891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellobiose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellobiose metabolic process","synonyms":[{"name":"cellobiose metabolism","type":"exact"}],"termid":"GO:2000891"}


id: GO:0062104
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104932],"is_not":false,"summary":null,"term":"GO:0062104"}]},"cv_name":"molecular_function","definition":"Binding to a region of RNA containing a Pumilio-response element element. The consensus sequence for the element is UGUAAAUA.","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pumilio-response element binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PRE binding","type":"exact"}],"termid":"GO:0062104","terms_by_termid":{"GO:0062104":null}}


id: PBO:0111650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller SMARCAD1 family Fft2","termid":"PBO:0111650"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: PBO:0082991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper metallochaperone; transports copper to the secretory vesicle copper transporter Ccc2p for eventual insertion into Fet3p, which is a multicopper oxidase required for high-affinity iron uptake; human homolog ATOX1 can complement yeast atx1 mutant; overexpression of human ATOX1 suppresses lysine auxotrophy of the yeast sod1 null mutant, as does overexpression of yeast ATX1","termid":"PBO:0082991"}


id: GO:0043038
data:
  {"annotated_genes":["SJAG_00243","SJAG_03277","SJAG_01577","SJAG_00420","SJAG_01235","SJAG_02236","SJAG_02977","SJAG_04840","SJAG_02206","SJAG_04738","SJAG_03585","SJAG_04285","SJAG_05560","SJAG_04856","SJAG_03545","SJAG_04094","SJAG_01797","SJAG_04473","SJAG_00653","SJAG_02517","SJAG_04482","SJAG_16456","SJAG_03626","SJAG_01159","SJAG_01352","SJAG_01522","SJAG_01197","SJAG_02263","SJAG_00488","SJAG_01259","SJAG_02721","SJAG_04762","SJAG_02428","SJAG_02615","SJAG_04409","SJAG_02015","SJAG_00103","SJAG_00443","SJAG_03071","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043041"},{"annotations":[102272,105085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006421"},{"annotations":[76686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006422"},{"annotations":[72341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006423"},{"annotations":[93689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[104676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[80031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006425"},{"annotations":[71657,75022,118427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070681"},{"annotations":[72713,70141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006424"},{"annotations":[78772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006427"},{"annotations":[71470,75162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006428"},{"annotations":[75764,77932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006429"},{"annotations":[71664,73420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006430"},{"annotations":[69231,78114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006431"},{"annotations":[64075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[107231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[118084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[72777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[72883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[71205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[97658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[78865,77382,78535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006432"},{"annotations":[77196,70359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006433"},{"annotations":[76751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006434"},{"annotations":[70548,73488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006435"},{"annotations":[96060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006418"},{"annotations":[69932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006436"},{"annotations":[58025,78696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006437"}]},"cv_name":"biological_process","definition":"The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic 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acid activation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043038","terms_by_termid":{"GO:0006418":null,"GO:0006421":null,"GO:0006422":null,"GO:0006423":null,"GO:0006424":null,"GO:0006425":null,"GO:0006427":null,"GO:0006428":null,"GO:0006429":null,"GO:0006430":null,"GO:0006431":null,"GO:0006432":null,"GO:0006433":null,"GO:0006434":null,"GO:0006435":null,"GO:0006436":null,"GO:0006437":null,"GO:0043041":null,"GO:0061475":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:0070681":null,"GO:1990762":null}}


id: PBO:0056202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A10","termid":"PBO:0056202"}


id: PBO:0076618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A pseudogene 3","termid":"PBO:0076618"}


id: PBO:0041516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 48","termid":"PBO:0041516"}


id: PBO:0064104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL4 antisense RNA 1","termid":"PBO:0064104"}


id: MONDO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the absence of nuclear anaplasia.","definition_xrefs":["NCIT:C6951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"nonanaplastic kidney Wilms tumor","secondary_identifiers":["UMLS:C1335062","MEDGEN:277434"],"synonyms":[{"name":"nonanaplastic kidney Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumor","type":"exact"},{"name":"nonanaplastic renal Wilm's tumour","type":"exact"},{"name":"nonanaplastic renal Wilms tumor","type":"exact"},{"name":"nonanaplastic renal Wilms tumour","type":"exact"},{"name":"nonanaplastic renal Wilms' tumor","type":"exact"},{"name":"nonanaplastic renal Wilms' tumour","type":"exact"}],"termid":"MONDO:0003316","xrefs":{"Monarch":{"xref_id":"0003316"}}}


id: PBO:0088143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar serine-type carboxypeptidase; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; N-glycosylated","termid":"PBO:0088143"}


id: GO:1903332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein folding.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"regulation of protein folding","synonyms":[{"name":"regulation of alpha-tubulin folding","type":"narrow"},{"name":"regulation of beta-tubulin folding","type":"narrow"},{"name":"regulation of chaperone activity","type":"related"},{"name":"regulation of chaperonin ATPase activity","type":"related"},{"name":"regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"regulation of co-chaperone activity","type":"related"},{"name":"regulation of co-chaperonin activity","type":"related"},{"name":"regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"regulation of protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:1903332"}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: PATO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000063 percentage (obsolete PATO:0000063)","termid":"PATO:0000063"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: PBO:0030124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfur_level","termid":"PBO:0030124"}


id: GO:1903650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GOC:TermGenie","PMID:25049409","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytoplasmic transport (obsolete GO:1903650)","synonyms":[{"name":"down regulation of cytoplasmic streaming","type":"narrow"},{"name":"down regulation of cytoplasmic transport","type":"exact"},{"name":"down-regulation of cytoplasmic streaming","type":"narrow"},{"name":"down-regulation of cytoplasmic transport","type":"exact"},{"name":"downregulation of cytoplasmic streaming","type":"narrow"},{"name":"downregulation of cytoplasmic transport","type":"exact"},{"name":"inhibition of cytoplasmic streaming","type":"narrow"},{"name":"inhibition of cytoplasmic transport","type":"narrow"},{"name":"negative regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903650"}


id: MONDO:0013859
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275],"is_not":false,"summary":null,"term":"MONDO:0013859"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the AGK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766408","OMIM:614691","UMLS:C3553494","DOID:0110245"],"synonyms":[{"name":"AGK early-onset non-syndromic cataract","type":"exact"},{"name":"CATC5","type":"exact"},{"name":"CTRCT38","type":"exact"},{"name":"autosomal recessive congenital cataract 5","type":"exact"},{"name":"cataract 38","type":"exact"},{"name":"cataract 38, autosomal recessive","type":"exact"},{"name":"cataract type 38","type":"exact"},{"name":"cataract, autosomal recessive congenital 5","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in AGK","type":"exact"}],"termid":"MONDO:0013859","terms_by_termid":{"MONDO:0013859":null},"xrefs":{"Monarch":{"xref_id":"0013859"}}}


id: PR:O14285
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.17c","synonyms":[{"name":"Spom972h-spc34","type":"exact"},{"name":"outer kinetochore protein spc34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14285"}


id: PBO:0065583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 7 (inactive)","termid":"PBO:0065583"}


id: MONDO:1010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the TNXB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, TNXB-related, dog","secondary_identifiers":["OMIA:002203-9615"],"synonyms":[{"name":"clEDS","type":"exact"}],"termid":"MONDO:1010795","xrefs":{"Monarch":{"xref_id":"1010795"}}}


id: MONDO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Whipple disease (obsolete MONDO:0018099)","termid":"MONDO:0018099","xrefs":{"Monarch":{"xref_id":"0018099"}}}


id: MONDO:0015448
data:
  {"annotated_genes":["SJAG_00755","SJAG_00354","SJAG_04560","SJAG_03099","SJAG_01490","SJAG_05305","SJAG_00601","SJAG_03490","SJAG_00080","SJAG_01405","SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[85679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[85096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[85097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[85095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[85099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[86382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[86388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[86662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","definition":"Isolated complex III deficiency is a rare, genetic, mitochondrial oxidative phosphorylation disorder characterized by a wide spectrum of clinical manifestations ranging from isolated myopathy or transient hepatopathy to severe multisystem disorder (that may include hypotonia, failure to thrive, psychomotor delay, cardiomyopathy, encephalopathy, renal tubulopathy, hearing impairment, lactic acidosis, hypoglycemia and other signs and symptoms).","definition_xrefs":["Orphanet:1460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00354":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01405":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03099":null,"SJAG_03490":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111139","MEDGEN:377658","UMLS:C1852372","GARD:8295"],"synonyms":[{"name":"isolated CoQ-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated coenzyme Q-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated complex III deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex III deficiency","type":"exact"},{"name":"isolated ubiquinone-cytochrome C reductase deficiency","type":"exact"}],"termid":"MONDO:0015448","terms_by_termid":{"MONDO:0007415":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0032909":null,"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0015448"}}}


id: PBO:0079058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 13-1","termid":"PBO:0079058"}


id: GO:0047196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-alcohol + acyl-CoA = a long-chain ester + CoA.","definition_xrefs":["EC:2.3.1.75","MetaCyc:2.3.1.75-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"long-chain-alcohol O-fatty-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5696424","Reactome:R-HSA-8848582","GO:0103095","RHEA:38443"],"synonyms":[{"name":"acyl-CoA:long-chain-alcohol O-acyltransferase activity","type":"related"},{"name":"wax ester synthase activity","type":"exact"},{"name":"wax synthase activity","type":"related"},{"name":"wax-ester synthase activity","type":"related"}],"termid":"GO:0047196"}


id: MONDO:0018843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A embryonal carcinoma that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal carcinoma of the central nervous system","secondary_identifiers":["NCIT:C7010","UMLS:C1333377","ONCOTREE:BEC","MEDGEN:272566","DOID:7232","GARD:18836","Orphanet:48736"],"synonyms":[{"name":"central nervous system embryonal carcinoma","type":"exact"},{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of CNS","type":"exact"},{"name":"embryonal carcinoma of the CNS","type":"exact"},{"name":"embryonal carcinoma of the central nervous system","type":"exact"}],"termid":"MONDO:0018843","xrefs":{"Monarch":{"xref_id":"0018843"}}}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: PBO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17 (predicted)","termid":"PBO:0003504"}


id: PBO:0054191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1566","termid":"PBO:0054191"}


id: PBO:0081777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705E, pseudogene","termid":"PBO:0081777"}


id: PBO:0083544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps TRP1/YDR007W on opposite strand","termid":"PBO:0083544"}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:11124948","PMID:9566918","PMID:20631144","PMID:12829834"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: GO:0097693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Eye-like subcellular structure found in dinoflagellates (a large group of single-celled eukaryotes). Consists of subcellular analogues to a cornea, lens, iris, and retina. Ocelloids are built from pre-existing organelles, including a cornea-like layer made of mitochondria and a retinal body made of anastomosing plastids.","definition_xrefs":["GOC:ar","PMID:26131935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ocelloid","termid":"GO:0097693"}


id: PBO:0075281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 21","termid":"PBO:0075281"}


id: GO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the extracellular matrix protein NOV.","definition_xrefs":["PMID:12902636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-NOV complex","synonyms":[{"name":"ITGAV-ITGB3-FN-1-NOV complex","type":"narrow"}],"termid":"GO:0071118"}


id: PBO:0040717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7C","termid":"PBO:0040717"}


id: GO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"},{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pigment granule transport","synonyms":[{"name":"pigment granule translocation","type":"exact"}],"termid":"GO:0051904"}


id: MONDO:0009387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial lipoprotein lipase deficiency is a rare genetic disorder is which a person lacks the enzyme lipoprotein lipase, a protein needed to break down fat molecules. Deficiency of this enzyme prevents affected individuals from properly digesting certain fats. This results in the accumulation of fatty droplets called chylomicrons in the blood and an increase in the blood concentration of triglycerides. Symptoms include episodes of abdominal pain, recurrent inflammation of the pancreas (pancreatitis), abnormal enlargement of the liver and/or spleen (hepatosplenomegaly), and the development of skin lesions known as erruptive xanthomas. Familial lipoprotein lipase deficiency is caused by changes (mutations) in the LPL gene. It is inherited in an autosomal recessive pattern. Treatment aims to control symptoms and blood triglyceride levels with a very low-fat diet. Treatment for individual symptoms (i.e. pancreatitis) involves following established treatment guidelines.","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"familial lipoprotein lipase deficiency","secondary_identifiers":["Orphanet:309015","SCTID:275598004","OMIM:238600","UMLS:C0023817","MESH:D008072","DOID:14118","icd11.foundation:1829539217","NORD:1129","ICD9:272.3","MEDGEN:7352","NCIT:C84771","GARD:12241"],"synonyms":[{"name":"Burger-Grutz syndrome","type":"related"},{"name":"Fredrickson type I hyperlipoproteinemia","type":"exact"},{"name":"Fredrickson type I lipaemia","type":"exact"},{"name":"LPL deficiency","type":"exact"},{"name":"chylomicronemia, familial","type":"related"},{"name":"endogenous hypertriglyceridaemia","type":"related"},{"name":"familial LPL deficiency","type":"exact"},{"name":"familial chylomicronemia syndrome","type":"broad"},{"name":"familial fat-induced hypertriglyceridemia","type":"related"},{"name":"familial hyperchylomicronemia","type":"related"},{"name":"familial hyperlipoproteinemia type I","type":"exact"},{"name":"familial lipoprotein lipase deficiency (disorder) [ambiguous]","type":"exact"},{"name":"familial lipoprotein lipase deficiency with type I phenotype","type":"exact"},{"name":"high density lipoprotein cholesterol level QTL 11","type":"exact"},{"name":"hypercholesterinaemic xanthomatosis","type":"exact"},{"name":"hyperchylomicronemia","type":"exact"},{"name":"hyperchylomicronemia, familial","type":"related"},{"name":"hyperlipemia, essential familial","type":"related"},{"name":"hyperlipemia, idiopathic, Burger-Grutz type","type":"related"},{"name":"hyperlipoproteinemia type I","type":"broad"},{"name":"hyperlipoproteinemia, type 1","type":"broad"},{"name":"hyperlipoproteinemia, type 1A","type":"related"},{"name":"hyperlipoproteinemia, type I","type":"broad"},{"name":"lipase D deficiency","type":"related"},{"name":"lipd deficiency","type":"related"},{"name":"lipoprotein lipase deficiency","type":"related"},{"name":"lipoprotein lipase deficiency, familial","type":"related"},{"name":"mixed hyperglyceridemia","type":"exact"},{"name":"type I hyperlipoproteinemia","type":"broad"}],"termid":"MONDO:0009387","xrefs":{"Monarch":{"xref_id":"0009387"}}}


id: GO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that positively_regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin secretion","termid":"GO:0100011"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["GOC:dph","PMID:1270266","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


id: MONDO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A broad classification of disorders which includes 6 subtypes (primary central sleep apnea, central sleep apnea due to Cheyne-Stokes breathing pattern, central sleep apnea due to medical condition not Cheyne-Stokes, central sleep apnea due to high-altitude periodic breathing, central sleep apnea due to drug or substance and primary sleep apnea of infancy) that are each characterized by interruptions in breathing while asleep. It is caused by improper signaling from the brainstem to respiratory muscles and is triggered by either hypoventilation or hyperventilation. In adults, this disorder may arise following a stroke, congestive heart failure, trauma, infection or the use of narcotic medications. It is more common in older males and may present as a co-morbid condition to obesity. Clinical signs include snoring, insomnia or hypersomnia, difficulty concentrating and fatigue. Recurrent episodes of hypoxia/hypoxemia have long-term detrimental effects on cardiovascular health.","definition_xrefs":["NCIT:C27169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sleep apnea syndrome","termid":"MONDO:0005296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea syndrome","secondary_identifiers":["MESH:D020182","DOID:9220","SCTID:27405005","UMLS:C3887547","ICD9:327.21","MEDGEN:854402"],"synonyms":[{"name":"Apneas, central","type":"related"},{"name":"Apneas, central sleep","type":"related"},{"name":"Breathings, central sleep-disordered","type":"related"},{"name":"alveolar hypoventilation, central","type":"related"},{"name":"alveolar hypoventilations, central","type":"related"},{"name":"apnea, central","type":"related"},{"name":"apnea, central sleep","type":"related"},{"name":"apnea, sleep, central","type":"related"},{"name":"breathing, central sleep-disordered","type":"related"},{"name":"central Apneas","type":"related"},{"name":"central alveolar hypoventilation","type":"related"},{"name":"central alveolar hypoventilation syndrome","type":"related"},{"name":"central apnea","type":"related"},{"name":"central sleep Apneas","type":"related"},{"name":"central sleep apnea","type":"related"},{"name":"central sleep apnea syndrome","type":"exact"},{"name":"central sleep apnea, primary","type":"narrow"},{"name":"central sleep apnea, secondary","type":"related"},{"name":"central sleep disordered breathing","type":"related"},{"name":"central sleep-disordered Breathings","type":"related"},{"name":"central sleep-disordered breathing","type":"related"},{"name":"hypoventilation, central alveolar","type":"related"},{"name":"hypoventilations, central alveolar","type":"related"},{"name":"ondine syndrome","type":"related"},{"name":"primary central sleep apnea","type":"narrow"},{"name":"secondary central sleep apnea","type":"narrow"},{"name":"sleep Apneas, central","type":"related"},{"name":"sleep apnea, lethal central","type":"related"},{"name":"sleep disordered breathing, central","type":"related"},{"name":"sleep-disordered Breathings, central","type":"related"},{"name":"sleep-disordered breathing, central","type":"related"}],"termid":"MONDO:0004731","xrefs":{"Monarch":{"xref_id":"0004731"}}}


id: MONDO:0019223
data:
  {"annotated_genes":["SJAG_02769","SJAG_00413","SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[86510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02769":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of fatty acid and ketone body metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842462","GARD:18954","Orphanet:79174","UMLS:C5681281"],"synonyms":[{"name":"disorder of fatty acid oxidation and ketone body metabolism","type":"related"},{"name":"inborn disorder of fatty acid oxidation and ketone body metabolism","type":"exact"}],"termid":"MONDO:0019223","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009492":null,"MONDO:0011614":null},"xrefs":{"Monarch":{"xref_id":"0019223"}}}


id: PBO:0083495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2","termid":"PBO:0083495"}


id: PBO:0046583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 25","termid":"PBO:0046583"}


id: GO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tonic skeletal muscle contraction","termid":"GO:0014748"}


id: GO:0046149
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pigment breakdown","type":"exact"},{"name":"pigment catabolism","type":"exact"},{"name":"pigment degradation","type":"exact"}],"termid":"GO:0046149","terms_by_termid":{"GO:0042167":null}}


id: MONDO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrichia with papular lesions is a rare inherited form of alopecia characterized by irreversible hair loss during the neonatal period on all hear-bearing areas of the body, later associated with the development of papular lesions all over the body and preferentially on the face and extensor surfaces of the extremities.","definition_xrefs":["Orphanet:86819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrichia with papular lesions","secondary_identifiers":["DOID:0060689","MEDGEN:395299","GARD:16762","MESH:C565924","OMIM:209500","SCTID:715963002","UMLS:C1859592"],"synonyms":[{"name":"APL","type":"related"},{"name":"atrichia with papular lesions","type":"exact"},{"name":"papular atrichia","type":"exact"}],"termid":"MONDO:0008847","xrefs":{"Monarch":{"xref_id":"0008847"}}}


id: MONDO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood coagulation disease characterized by autosomal dominant inheritance with macrothrombocytopenia, platelet anisocytosis, prolonged bleeding time but only mildly increased bleeding tendency that has material basis in heterozygous mutation in the ITGA2B gene on chromosome 17q21.31 or the ITGB3 gene on chromosome 17q21.32.","definition_xrefs":["PMID:21454453","DOID:0060691","PMID:9834222","PMID:18065693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 16","secondary_identifiers":["MESH:C566061","UMLS:C5442010","OMIM:187800","MEDGEN:1781222"],"synonyms":[{"name":"BDPLT16","type":"related"},{"name":"Glanzmann thrombasthenia, autosomal dominant","type":"related"},{"name":"autosomal dominant Glanzmann thrombasthenia","type":"exact"},{"name":"autosomal dominant thrombasthenia of Glanzmann and Naegeli","type":"exact"},{"name":"bleeding disorder, platelet-type, 16","type":"related"},{"name":"bleeding disorder, platelet-type, 16, autosomal dominant","type":"exact"},{"name":"platelet-type bleeding disorder 16","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli, autosomal dominant","type":"related"}],"termid":"MONDO:0008552","xrefs":{"Monarch":{"xref_id":"0008552"}}}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: GO:2000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclodextrin metabolic process","synonyms":[{"name":"regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000954"}


id: GO:0016774
data:
  {"annotated_genes":["SJAG_03457","SJAG_00636","SJAG_00881","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003991"},{"annotations":[73471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[70003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[69848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a carboxyl group (acceptor).","definition_xrefs":["EC:2.7.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00636":null,"SJAG_00881":null,"SJAG_03457":null,"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, carboxyl group as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016774","terms_by_termid":{"GO:0003991":null,"GO:0004072":null,"GO:0004349":null,"GO:0004618":null}}


id: GO:0046165
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012","SJAG_00413","SJAG_02406","SJAG_02706","SJAG_00321","SJAG_00624","SJAG_04810","SJAG_00554","SJAG_00370","SJAG_04866","SJAG_03249","SJAG_03362","SJAG_02321","SJAG_03531","SJAG_02421","SJAG_03098","SJAG_00827","SJAG_02429","SJAG_03024","SJAG_03715","SJAG_03929","SJAG_02104","SJAG_02734","SJAG_00453","SJAG_01474","SJAG_01148","SJAG_00244","SJAG_04499","SJAG_04954","SJAG_02420","SJAG_00381","SJAG_04018","SJAG_03018","SJAG_04217","SJAG_03509","SJAG_02305","SJAG_00717","SJAG_03409","SJAG_03275","SJAG_03739","SJAG_01970","SJAG_03750","SJAG_03538","SJAG_02163","SJAG_00880","SJAG_02855","SJAG_04178","SJAG_02719","SJAG_01307","SJAG_04282","SJAG_03743","SJAG_04842","SJAG_00770","SJAG_04270","SJAG_01057","SJAG_04067","SJAG_02044","SJAG_02982","SJAG_03598","SJAG_03235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73768,71277,71036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[74358,100008,71853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[88428,107544,89614,115257,71619,73027,80122,110100,80206,73872,94605,109259,71442,116569,80341,76075,107858,76251,74154,69706,77073,65699,76154,70685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[106513,93946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[65774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[71089,93352,74671,75690,70840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[93851],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109865],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[88992,113702],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[75498],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[105856,88518],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[76815,106002,109728,73635,78868,96887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[69745,108541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[61536,73923,78398,69871,77002,73818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[110463,110462,99527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_00370":null,"SJAG_00381":null,"SJAG_00409":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00554":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_00827":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_01970":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02163":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_02719":null,"SJAG_02734":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03098":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03409":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03538":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03739":null,"SJAG_03743":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04067":null,"SJAG_04178":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04282":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04842":null,"SJAG_04866":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol anabolism","type":"exact"},{"name":"alcohol biosynthesis","type":"exact"},{"name":"alcohol formation","type":"exact"},{"name":"alcohol synthesis","type":"exact"}],"termid":"GO:0046165","terms_by_termid":{"GO:0000949":null,"GO:0006021":null,"GO:0006114":null,"GO:0006696":null,"GO:0006729":null,"GO:0009228":null,"GO:0010895":null,"GO:0019408":null,"GO:0032443":null,"GO:0032958":null,"GO:0036172":null,"GO:0045540":null,"GO:0046512":null,"GO:0070452":null,"GO:0090180":null}}


id: MONDO:0013111
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85496],"is_not":false,"summary":null,"term":"MONDO:0013111"}]},"cv_name":"mondo","definition":"Acute infantile liver failure due to mtDNA-encoded proteins synthesis defect is a very rare mitochondrial respiratory chain deficiency described in fewer than 10 infants, primarily of middle Eastern descent, and characterized clinically by transient but life-threatening liver failure with elevated liver enzymes, jaundice, vomiting, coagulopathy, hyperbilirubinemia, and lactic acidemia.","definition_xrefs":["Orphanet:217371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"acute liver failure","termid":"MONDO:0019542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0004069","MONDO:0002515"],"is_obsolete":false,"name":"acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:480294","OMIM:613070","DOID:0080778","GARD:10593","UMLS:C3278664"],"synonyms":[{"name":"LFIT","type":"exact"},{"name":"TRMU infantile liver failure","type":"exact"},{"name":"acute infantile liver failure","type":"broad"},{"name":"acute infantile liver failure due to synthesis defect of mitochondrial DNA-encoded proteins","type":"exact"},{"name":"acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins","type":"exact"},{"name":"infantile liver failure caused by mutation in TRMU","type":"exact"},{"name":"liver failure, infantile, transient","type":"exact"},{"name":"liver failure, transient infantile","type":"exact"},{"name":"transient infantile liver failure","type":"exact"}],"termid":"MONDO:0013111","terms_by_termid":{"MONDO:0013111":null},"xrefs":{"Monarch":{"xref_id":"0013111"}}}


id: MONDO:1010974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy, non-human animal","termid":"MONDO:1010230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, domestic cat","secondary_identifiers":["OMIA:000453-9685"],"termid":"MONDO:1010974","xrefs":{"Monarch":{"xref_id":"1010974"}}}


id: PBO:0110472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX16 pseudogene 1","termid":"PBO:0110472"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.8","KEGG_REACTION:R01873","MetaCyc:1.1.99.25-RXN"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: FYPO:0008157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal at the silent-mating type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone deacetylation during vegetative growth","termid":"FYPO:0000201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone deacetylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008157"}


id: MONDO:0004617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by hypersomnolence during normal waking hours that may impair cognitive functioning. Subtypes include primary hypersomnia disorders (e.g., idiopathic hypersomnolence; narcolepsy; and kleine-levin syndrome) and secondary hypersomnia disorders where excessive somnolence can be attributed to a known cause (e.g., drug affect, mental disorders, and sleep apnea syndrome). (From J Neurol Sci 1998 Jan 8;153(2):192-202; Thorpy, Principles and Practice of Sleep Medicine, 2nd ed, p320)","definition_xrefs":["MESH:D006970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent hypersomnia","secondary_identifiers":["ICD9:327.13","SCTID:426451004","UMLS:C0751226","MEDGEN:155520","DOID:8619","ICD10CM:G47.13"],"synonyms":[{"name":"primary recurrent hypersomnia","type":"exact"}],"termid":"MONDO:0004617","xrefs":{"Monarch":{"xref_id":"0004617"}}}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: PBO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I A","termid":"PBO:0060944"}


id: PBO:0039215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C6, pseudogene","termid":"PBO:0039215"}


id: GO:0086047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Purkinje myocyte membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during Purkinje myocyte cell action potential","termid":"GO:0086047"}


