# terms

id: MONDO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nodular nonsuppurative panniculitis (obsolete MONDO:0006587)","termid":"MONDO:0006587","xrefs":{"Monarch":{"xref_id":"0006587"}}}


id: GO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032830"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0032832"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"down regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"down-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"downregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"inhibition of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032833"}


id: PBO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein eis1","termid":"PBO:0018146"}


id: MOD:00486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:114#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxProBiotinRed","type":"related"},{"name":"Oxidized proline biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00486"}


id: PBO:0044668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylarginine dimethylaminohydrolase 1","termid":"PBO:0044668"}


id: GO:0048137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic divisions undergone by the primary and secondary spermatocytes to produce haploid spermatids.","definition_xrefs":["ISBN:0879694238","GOC:jid","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatocyte division","synonyms":[{"name":"spermatocyte cell division","type":"exact"}],"termid":"GO:0048137"}


id: PBO:0050801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 1","termid":"PBO:0050801"}


id: PBO:0012240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi5 (predicted)","termid":"PBO:0012240"}


id: MONDO:0003289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign smooth muscle neoplasm arising from deep tissue. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C6512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deep leiomyoma","secondary_identifiers":["DOID:5128","MEDGEN:234195","UMLS:C1333266"],"synonyms":[{"name":"deep leiomyoma","type":"exact"}],"termid":"MONDO:0003289","xrefs":{"Monarch":{"xref_id":"0003289"}}}


id: FYECO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium nitroprusside (SNP) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SNP","synonyms":[{"name":"+ sodium nitroprusside","type":"exact"}],"termid":"FYECO:0000271"}


id: GO:0016049
data:
  {"annotated_genes":["SJAG_02723","SJAG_03602","SJAG_00514","SJAG_02838","SJAG_01017","SJAG_01456","SJAG_03705","SJAG_04724","SJAG_02169","SJAG_04509","SJAG_00216","SJAG_00244","SJAG_02392","SJAG_03581","SJAG_03486","SJAG_04322"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95821,89820,94548],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[87845,93988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[88009,103492,116506,110775,117933,106867,99740],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[90689],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[106667],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[115073],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[98429],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048591"],"synonyms":[{"name":"cell expansion","type":"related"},{"name":"cellular growth","type":"exact"},{"name":"growth of cell","type":"exact"},{"name":"metabolic process resulting in cell growth","type":"related"},{"name":"metabolism resulting in cell growth","type":"related"},{"name":"non-developmental cell growth","type":"related"},{"name":"non-developmental growth of a unicellular organism","type":"related"}],"termid":"GO:0016049","terms_by_termid":{"GO:0030307":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: GO:0016422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am.","definition_xrefs":["EC:2.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.62-RXN","RHEA:22744"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate 2'-O-methyladenosine NG-methyltransferase activity","type":"related"}],"termid":"GO:0016422"}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah","PMID:23710316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0150121","GO:0045382"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: MONDO:0018373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotic changes in the bone tissue due to interruption of blood supply. Most often affecting the epiphysis of the long bones, the necrotic changes result in the collapse and the destruction of the bone structure.","definition_xrefs":["NCIT:C34841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis","secondary_identifiers":["Orphanet:399164","UMLS:C0027543","SCTID:397758007","GARD:21658","MEDGEN:10200"],"synonyms":[{"name":"AVN","type":"exact"},{"name":"avascular necrosis of bone","type":"exact"}],"termid":"MONDO:0018373","xrefs":{"Monarch":{"xref_id":"0018373"}}}


id: PBO:0062533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 2","termid":"PBO:0062533"}


id: PR:Q10357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper chaperone for superoxide dismutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 copper chaperone (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.04","secondary_identifiers":["UniProtKB:Q10357"],"synonyms":[{"name":"SPAC22E12.04","type":"related"},{"name":"Spom972h-CCS","type":"exact"},{"name":"pccs","type":"related"}],"termid":"PR:Q10357"}


id: PBO:0024845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreF","termid":"PBO:0024845"}


id: PBO:0110985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA nam1, byr2 repressing","termid":"PBO:0110985"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: MONDO:0003031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the cervix. It includes low grade endometrioid stromal sarcoma and undifferentiated endocervical sarcoma.","definition_xrefs":["NCIT:C40218"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms of the cervix","secondary_identifiers":["UMLS:C4289586","DOID:4521","MEDGEN:927118"],"synonyms":[{"name":"cervix endometrial stromal tumor","type":"related"},{"name":"cervix endometrial stromal tumour","type":"related"},{"name":"endometrioid stromal and related neoplasms of the cervix","type":"exact"},{"name":"endometrioid stromal and related tumors of the cervix","type":"exact"},{"name":"endometrioid stromal and related tumours of the cervix","type":"exact"}],"termid":"MONDO:0003031","xrefs":{"Monarch":{"xref_id":"0003031"}}}


id: PBO:0028395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_20S_rRNA_precursor_level","termid":"PBO:0028395"}


id: PBO:0117228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane internal ferric-chelate reductase Frp1","termid":"PBO:0117228"}


id: GO:1903870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GO_REF:0000059","GOC:rph","GOC:TermGenie","PMID:24769206","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity (obsolete GO:1903870)","synonyms":[{"name":"activation of 5,10-CH(2)-H(4)folate reductase activity","type":"narrow"},{"name":"activation of 5,10-CH2-H4folate reductase activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"narrow"},{"name":"activation of MetF","type":"related"},{"name":"activation of N5,10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of N5,N10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"activation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH2)","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"positive regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of MetF","type":"related"},{"name":"positive regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up regulation of MetF","type":"related"},{"name":"up regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up-regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of MetF","type":"related"},{"name":"up-regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"upregulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"upregulation of MetF","type":"related"},{"name":"upregulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"upregulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"}],"termid":"GO:1903870"}


id: GO:1905265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of blasticidin S.","definition_xrefs":["PMID:23874663","Wikipedia:Blasticidin_S","GOC:pr","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"blasticidin S catabolic process","synonyms":[{"name":"blasticidin S breakdown","type":"exact"},{"name":"blasticidin S catabolism","type":"exact"},{"name":"blasticidin S degradation","type":"exact"}],"termid":"GO:1905265"}


id: GO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to secondary (or auxiliary or axillary) shoots in plants. This process pertains to the initial formation of a structure from unspecified parts. These secondary shoots originate from secondary meristems initiated in the axils of leaf primordia. Axillary meristems function like the shoot apical meristem of the primary shoot initiating the development of lateral organs.","definition_xrefs":["PMID:12815068","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"shoot axis formation","termid":"GO:0010346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary shoot formation","synonyms":[{"name":"auxiliary shoot formation","type":"related"},{"name":"axillary shoot formation","type":"related"},{"name":"axillary shoot system formation","type":"exact"},{"name":"shoot branching","type":"related"}],"termid":"GO:0010223"}


id: FYPO:0002547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nicotinamide. Cells stop growing (and may die) at a concentration of nicotinamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nicotinamide","synonyms":[{"name":"hypersensitive to nicotinamide","type":"exact"},{"name":"sensitive to nicotinamide during mitotic cell cycle","type":"related"},{"name":"sensitive to nicotinamide during vegetative growth","type":"exact"}],"termid":"FYPO:0002547"}


id: SO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_match","synonyms":[{"name":"protein match","type":"exact"}],"termid":"SO:0000349"}


id: GO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086057"}


id: PBO:0028796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_rDNA_replication_fork_barrier","termid":"PBO:0028796"}


id: GO:0035063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of nuclear specks, a class of nuclear body in which splicing factors are localized.","definition_xrefs":["GOC:bf","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear speck organization","synonyms":[{"name":"nuclear speck organisation","type":"exact"},{"name":"nuclear speck organization and biogenesis","type":"related"},{"name":"nuclear speckle assembly","type":"narrow"},{"name":"nuclear speckle organization","type":"exact"}],"termid":"GO:0035063"}


id: PBO:0075648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 3","termid":"PBO:0075648"}


id: PBO:0076709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7 like 2","termid":"PBO:0076709"}


id: MONDO:0012426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency in which the cause of the disease is a mutation in the CD247 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency due to CD3delta/CD3epsilon/CD3zeta","termid":"MONDO:0015703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 25","secondary_identifiers":["OMIM:610163","GARD:18294","MEDGEN:346666","DOID:0060007","DOID:0111942","UMLS:C1857798","MESH:C565712"],"synonyms":[{"name":"CD247 severe combined immunodeficiency (disease)","type":"exact"},{"name":"CD3zeta deficiency","type":"exact"},{"name":"IMD25","type":"related"},{"name":"immunodeficiency 25","type":"exact"},{"name":"immunodeficiency due to defect in CD3-zeta","type":"related"},{"name":"immunodeficiency type 25","type":"exact"},{"name":"severe combined immunodeficiency (disease) caused by mutation in CD247","type":"exact"}],"termid":"MONDO:0012426","xrefs":{"Monarch":{"xref_id":"0012426"}}}


id: MONDO:0010506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the RLIM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 61","secondary_identifiers":["UMLS:C4283894","GARD:22695","DOID:0112042","MEDGEN:924419","OMIM:300978"],"synonyms":[{"name":"MRX61","type":"exact"},{"name":"RLIM non-syndromic X-linked intellectual disability","type":"exact"},{"name":"Tonne-Kalscheuer syndrome","type":"exact"},{"name":"intellectual disability, X-linked 61","type":"exact"},{"name":"intellectual disability, X-linked type 61","type":"exact"},{"name":"mental retardation, X-linked 61","type":"exact"},{"name":"mental retardation, X-linked type 61","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in RLIM","type":"exact"}],"termid":"MONDO:0010506","xrefs":{"Monarch":{"xref_id":"0010506"}}}


id: PBO:0073375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine rich and transmembrane domain containing 1","termid":"PBO:0073375"}


id: PBO:0074079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 3","termid":"PBO:0074079"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: MONDO:0030035
data:
  {"annotated_genes":["SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85369,85370],"is_not":false,"summary":null,"term":"MONDO:0030035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719567","OMIM:618877","UMLS:C5394367"],"synonyms":[{"name":"LEUDEN","type":"exact"},{"name":"LEUKOENCEPHALOPATHY, DEVELOPMENTAL DELAY, AND EPISODIC NEUROLOGIC REGRESSION SYNDROME","type":"exact"},{"name":"Leuden Syndrome","type":"exact"},{"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","type":"exact"}],"termid":"MONDO:0030035","terms_by_termid":{"MONDO:0030035":null},"xrefs":{"Monarch":{"xref_id":"0030035"}}}


id: PBO:0053780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1030","termid":"PBO:0053780"}


id: GO:0010058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrichoblast fate specification","termid":"GO:0010058"}


id: GO:0048456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the stamen. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen structural organization","secondary_identifiers":["GO:0048428"],"synonyms":[{"name":"stamen structural organisation","type":"exact"}],"termid":"GO:0048456"}


id: MONDO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular pseudohypertrophy - hypothyroidism, also known as Kocher-Debre-Semelaigne syndrome is a rare disorder characterized by pseudohypertrophy of muscles due to longstanding hypothyroidism.","definition_xrefs":["Orphanet:2349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular pseudohypertrophy-hypothyroidism syndrome","secondary_identifiers":["GARD:8270","MEDGEN:82860","UMLS:C0270958","SCTID:716338001"],"synonyms":[{"name":"Hoffman syndrome","type":"related"},{"name":"Kocher-Debre-Semelaigne syndrome","type":"exact"},{"name":"Kocher-Debré-Semelaigne syndrome","type":"exact"}],"termid":"MONDO:0016521","xrefs":{"Monarch":{"xref_id":"0016521"}}}


id: PBO:0051317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-1 (pseudogene)","termid":"PBO:0051317"}


id: MONDO:0800438
data:
  {"annotated_genes":["SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85560],"is_not":false,"summary":null,"term":"MONDO:0800438"}]},"cv_name":"mondo","definition":"Any developmental delay with short stature, dysmorphic facial features, and sparse hair in which the cause of the disease is a mutation in the DPH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dysostosis of genetic origin (obsolete MONDO:0018454)","termid":"MONDO:0018454"},{"relation_name":"is_a","term_name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","termid":"MONDO:0031632"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01058":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17814","OMIM:616901","DOID:0070477","Orphanet:459061"],"synonyms":[{"name":"DEDSSH1","type":"exact"},{"name":"Loucks-Innes syndrome","type":"related"},{"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","type":"broad"},{"name":"developmental delay with short stature, dysmorphic features, and sparse hair 1","type":"exact"},{"name":"developmental delay-short stature-dysmorphic features-sparse hair syndrome","type":"broad"},{"name":"diphtamide deficiency syndrome","type":"exact"}],"termid":"MONDO:0800438","terms_by_termid":{"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0800438"}}}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: MONDO:0016498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute pure sensory neuropathy","secondary_identifiers":["Orphanet:231450","GARD:20616","MEDGEN:1682724","UMLS:C5190881"],"synonyms":[{"name":"acute pure sensory GBS","type":"exact"},{"name":"acute pure sensory Guillain-Barre syndrome","type":"exact"},{"name":"acute pure sensory Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016498","xrefs":{"Monarch":{"xref_id":"0016498"}}}


id: GO:0098551
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the lumen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of endosome membrane","termid":"GO:0098565"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"lumenal side of late endosome membrane","synonyms":[{"name":"internal leaflet of late endosome membrane","type":"exact"},{"name":"internal side of late endosome membrane","type":"exact"}],"termid":"GO:0098551"}


id: MOD:00209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204#SER","PubMed:3769923","PubMed:3181159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Ser)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Ser-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"},{"name":"XLNK-(D)SCys-VinAm","type":"exact"}],"termid":"MOD:00209"}


id: PBO:0026828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026828"}


id: PR:000050474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","termid":"PR:P33886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"},{"name":"wis1","type":"related"}],"termid":"PR:000050474"}


id: MONDO:0800153
data:
  {"annotated_genes":["SJAG_04577","SJAG_01461","SJAG_00412","SJAG_00695","SJAG_00392","SJAG_03398","SJAG_03266","SJAG_00635","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008815"},{"annotations":[85021,85022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009376"},{"annotations":[87022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008988"},{"annotations":[85017,85018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009377"},{"annotations":[85671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008814"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the urea cycle or an inherited hyperammonemia (any specific disease which causes an inherited increased concentration of ammonia in the blood).","direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder","termid":"MONDO:0004739"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01461":null,"SJAG_03266":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"urea cycle disorder or inherited hyperammonemia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800153","terms_by_termid":{"MONDO:0008814":null,"MONDO:0008815":null,"MONDO:0008988":null,"MONDO:0009376":null,"MONDO:0009377":null,"MONDO:0010703":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0800153"}}}


id: GO:0047209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + UDP-D-glucose = coniferin + UDP.","definition_xrefs":["EC:2.4.1.111","MetaCyc:2.4.1.111-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"coniferyl-alcohol glucosyltransferase activity","secondary_identifiers":["RHEA:23944"],"synonyms":[{"name":"UDP-glucose coniferyl alcohol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-coniferyl alcohol glucosyltransferase activity","type":"related"}],"termid":"GO:0047209"}


id: PBO:0083832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine-phosphate cytidylyltransferase; catalyzes the second step of phosphatidylethanolamine biosynthesis; involved in the maintenance of plasma membrane; similar to mammalian CTP: phosphocholine cytidylyl-transferases; inability of the null mutant to synthesize phosphatidylethanolamine and phosphatidylcholine from ethanolamine is functionally complemented by human PCYT2","termid":"PBO:0083832"}


id: PBO:0054804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2217","termid":"PBO:0054804"}


id: MONDO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation in the breast. It is characterized by the formation of capillary-sized and cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast angiomatosis","secondary_identifiers":["DOID:1637","MEDGEN:307304","NCIT:C40381","UMLS:C1511284"],"termid":"MONDO:0002064","xrefs":{"Monarch":{"xref_id":"0002064"}}}


id: GO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.","definition_xrefs":["NIF_Subcellular:sao1571698684","GOC:mr","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"is_a","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Barr body","secondary_identifiers":["Wikipedia:Barr_body"],"termid":"GO:0001740"}


id: PBO:0027946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitosis","termid":"PBO:0027946"}


id: PBO:0025477
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fabry disease","termid":"PBO:0025477"}


id: MONDO:0007889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lentigines (obsolete MONDO:0007889)","termid":"MONDO:0007889","xrefs":{"Monarch":{"xref_id":"0007889"}}}


id: MONDO:0025351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies-neurodevelopmental syndrome, X-linked","secondary_identifiers":["UMLS:C5542341","MEDGEN:1788942","OMIM:301056"],"synonyms":[{"name":"Linked syndrome","type":"exact"},{"name":"MCAND","type":"exact"},{"name":"multiple congenital anomalies-neurodevelopmental syndrome, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0025351","xrefs":{"Monarch":{"xref_id":"0025351"}}}


id: PBO:0068114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 421","termid":"PBO:0068114"}


id: PBO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_septated_germ_tube_morphology","termid":"PBO:0031065"}


id: PR:Q10498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hgh1 gene.","definition_xrefs":["UniProtKB:Q10498","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein HGH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.12c","synonyms":[{"name":"Spom972h-hgh1","type":"exact"}],"termid":"PR:Q10498"}


id: PBO:0076781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 4","termid":"PBO:0076781"}


id: PATO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is lesser relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distance","synonyms":[{"name":"short distance","type":"related"}],"termid":"PATO:0000375"}


id: PATO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during the light cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light phase","termid":"PATO:0000503"}


id: PBO:0075363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 3","termid":"PBO:0075363"}


id: PBO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 1","termid":"PBO:0044277"}


id: MONDO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary pulmonary lymphoma (PPL) is a rare lymphoma of the lung, defined as a clonal lymphoid proliferation affecting one or both lungs (parenchyma and/or bronchi) in a patient with no detectable extrapulmonary involvement at diagnosis or during the subsequent 3 months. PPL comprises low grade/indolent B cell PPL forms, the most frequent form represented by the marginal B-cell lymphoma of mucosa associated lymphoid tissue (MALT lymphoma) and other non-MALT low grade lymphomas; and more rarely high-grade B-cell PPL (including diffuse large B cell lymphoma) and lymphomatoid granulomatosis (LYG).","definition_xrefs":["Orphanet:2420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"primary pulmonary lymphoma","secondary_identifiers":["icd11.foundation:1042489672","UMLS:C4273669","GARD:18770","SCTID:718200007","MedDRA:10037418","MEDGEN:903876"],"termid":"MONDO:0016570","xrefs":{"Monarch":{"xref_id":"0016570"}}}


id: GO:0032780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of an ATP-dependent activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP-dependent activity","synonyms":[{"name":"down regulation of ATPase activity","type":"exact"},{"name":"down-regulation of ATPase activity","type":"exact"},{"name":"downregulation of ATPase activity","type":"exact"},{"name":"inhibition of ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase activity","type":"exact"},{"name":"negative regulation of adenosinetriphosphatase activity","type":"exact"}],"termid":"GO:0032780"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102327],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["PMID:15068790","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: GO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075150)","synonyms":[{"name":"regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075150"}


id: PBO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1","termid":"PBO:0052049"}


id: MONDO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic synpolydactyly in which the cause of the disease is a mutation in the HOXD13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic synpolydactyly","termid":"MONDO:0000722"},{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synpolydactyly type 1","secondary_identifiers":["Orphanet:295195","MEDGEN:1809573","OMIM:186000","UMLS:C5574994","GARD:17358","icd11.foundation:1701170393"],"synonyms":[{"name":"HOXD13 non-syndromic synpolydactyly","type":"exact"},{"name":"SD2, Vordingborg type","type":"exact"},{"name":"SD2a","type":"exact"},{"name":"SPD, Vordingborg type","type":"exact"},{"name":"SPD1","type":"exact"},{"name":"non-syndromic synpolydactyly caused by mutation in HOXD13","type":"exact"},{"name":"syndactyly, type 2","type":"related"},{"name":"synpolydactyly 1","type":"related"},{"name":"synpolydactyly type 1","type":"exact"},{"name":"synpolydactyly with foot anomalies","type":"related"},{"name":"synpolydactyly, Vordingborg type","type":"exact"}],"termid":"MONDO:0008513","xrefs":{"Monarch":{"xref_id":"0008513"}}}


id: GO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of posterior gap gene expression mediated largely by the effects of other gap genes; in insects this is exemplified by hunchback and tailless repression of knirps.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of posterior gap gene boundaries (obsolete GO:0007361)","termid":"GO:0007361"}


id: PBO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L8 (predicted)","termid":"PBO:0003145"}


id: PR:O59726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fnx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter fnx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.06c","synonyms":[{"name":"Spom972h-fnx2","type":"exact"}],"termid":"PR:O59726"}


id: PBO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA_replication_fork_barrier","termid":"PBO:0034607"}


id: PBO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIDEC pseudogene 2","termid":"PBO:0043165"}


id: PBO:0078715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAG) 3-1","termid":"PBO:0078715"}


id: PBO:0057511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 629","termid":"PBO:0057511"}


id: MONDO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc, elevated plasma","secondary_identifiers":["MEDGEN:349756","UMLS:C1860228","OMIM:194470"],"synonyms":[{"name":"albumin binding of zinc, elevated","type":"related"},{"name":"hyperzincemia and hypercalprotectinemia","type":"related"},{"name":"hyperzincemia, familial Dysalbuminemic","type":"related"},{"name":"zinc, elevated plasma","type":"exact"}],"termid":"MONDO:0008691","xrefs":{"Monarch":{"xref_id":"0008691"}}}


id: RO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two entities that have the property of being sequences or having sequences. ","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_related_to","termid":"RO:0002514"}


id: GO:0141198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at various positions of the ubiquitin monomers, forming branched linkages, such as K11/K48- or K11/K63-linked chains.","definition_xrefs":["PMID:31998699","PMID:29033132","PMID:37325469","PMID:29378950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein branched polyubiquitination","termid":"GO:0141198"}


id: PBO:0080334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 98 pseudogene","termid":"PBO:0080334"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: GO:1905230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["PMID:26593909","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to borneol","termid":"GO:1905230"}


id: PBO:0087164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C25; required for transcription initiation; forms a heterodimer with Rpc17p; paralog of Rpb7p","termid":"PBO:0087164"}


id: MOD:00365
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue by an isopeptide bond to form N-(L-isoglutamyl)-glycine.","definition_xrefs":["RESID:AA0360","PubMed:14531691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoglutamyl)-glycine","synonyms":[{"name":"(S)-2-amino-5-(carboxymethyl)amino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-(carboxymethyl)-pentanediamic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl glycine isopeptide (Gly-Glu)","type":"exact"},{"name":"N-(L-isoglutamyl)-glycine","type":"exact"},{"name":"N-gamma-glutamylglycine","type":"exact"},{"name":"isoglutamyl glycine","type":"exact"}],"termid":"MOD:00365"}


id: PATO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000359 water content value (obsolete PATO:0000359)","termid":"PATO:0000359"}


id: MONDO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"excessive tearing","termid":"MONDO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiphora due to insufficient drainage","secondary_identifiers":["icd11.foundation:2073269541","ICD9:375.22","DOID:13756","SCTID:85042000","UMLS:C0155234","MEDGEN:509862"],"termid":"MONDO:0001792","xrefs":{"Monarch":{"xref_id":"0001792"}}}


id: MONDO:0100448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the RAB28 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RAB28-related retinopathy","synonyms":[{"name":"CORD18","type":"narrow"},{"name":"RAB28 cone-rod dystrophy","type":"narrow"},{"name":"RAB28 retinopathy","type":"exact"},{"name":"cone-rod dystrophy 18","type":"narrow"},{"name":"cone-rod dystrophy caused by mutation in RAB28","type":"narrow"},{"name":"cone-rod dystrophy type 18","type":"narrow"}],"termid":"MONDO:0100448","xrefs":{"Monarch":{"xref_id":"0100448"}}}


id: PATO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitivity","termid":"PATO:0000927"}


id: MONDO:0016802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane transport disorder","termid":"MONDO:0016800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial protein import disorder","secondary_identifiers":["MEDGEN:1843384","UMLS:C5680717","GARD:20763","icd11.foundation:112110122","Orphanet:254834"],"termid":"MONDO:0016802","xrefs":{"Monarch":{"xref_id":"0016802"}}}


id: MONDO:0017853
data:
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id: MONDO:0030057
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id: GO:0036120
data:
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id: PBO:0076112
data:
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id: PR:O59712
data:
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id: GO:0072700
data:
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id: GO:0140535
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id: MONDO:0004907
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id: PBO:0084319
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id: GO:0004402
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id: PBO:0082386
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id: MONDO:0007555
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id: PBO:0034789
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id: FYPO:0002885
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id: GO:0031966
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id: MONDO:0014661
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id: GO:0051553
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id: PBO:0053717
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id: PBO:0088534
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id: PBO:0085886
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id: PBO:0024483
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id: PBO:0067439
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id: PBO:0047998
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id: SO:0001932
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id: PBO:0059625
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id: PBO:0048563
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id: GO:0043705
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id: GO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"part_of","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth by extracellular stimulus","synonyms":[{"name":"interpretation of external signals that regulate cell growth","type":"exact"},{"name":"regulation of cell growth by detection of exogenous stimulus","type":"exact"},{"name":"regulation of cell growth by sensing of exogenous stimulus","type":"exact"},{"name":"regulation of growth by exogenous signal","type":"exact"},{"name":"regulation of growth by exogenous stimuli","type":"exact"},{"name":"regulation of growth by exogenous stimulus","type":"exact"},{"name":"regulation of growth by external signal","type":"exact"},{"name":"regulation of growth by external stimuli","type":"exact"},{"name":"regulation of growth by external stimulus","type":"exact"}],"termid":"GO:0001560"}


id: MONDO:0008341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ptosis-strabismus-ectopic pupils syndrome is characterized by the association of ptosis, strabismus and ectopic pupils. It has been described in one family (in a mother and three of her children). Transmission is autosomal dominant.","definition_xrefs":["Orphanet:2999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-strabismus-ectopic pupils syndrome","secondary_identifiers":["OMIM:178330","UMLS:C1867437","GARD:4577","MEDGEN:356778","MESH:C566736"],"synonyms":[{"name":"McPherson-Hall syndrome","type":"exact"},{"name":"ptosis strabismus ectopic pupils","type":"related"},{"name":"ptosis, strabismus, and ectopic pupils","type":"related"}],"termid":"MONDO:0008341","xrefs":{"Monarch":{"xref_id":"0008341"}}}


id: PBO:0089860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel Yam8","termid":"PBO:0089860"}


id: PBO:0038525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 5","termid":"PBO:0038525"}


id: MONDO:0008069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"necrotizing encephalomyelopathy, subacute, of Leigh, adult","secondary_identifiers":["MESH:C563530","UMLS:C1834340","OMIM:161700","MEDGEN:331718"],"synonyms":[{"name":"Leigh syndrome, adult","type":"related"},{"name":"necrotizing encephalomyelopathy, subacute, of Leigh, adult","type":"exact"}],"termid":"MONDO:0008069","xrefs":{"Monarch":{"xref_id":"0008069"}}}


id: MONDO:0008500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striae distensae, familial","secondary_identifiers":["MEDGEN:348875","MESH:C566104","UMLS:C1861447","OMIM:185200"],"synonyms":[{"name":"striae distensae, familial","type":"exact"}],"termid":"MONDO:0008500","xrefs":{"Monarch":{"xref_id":"0008500"}}}


id: FYPO:0000256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mutation rate","termid":"FYPO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mutator","synonyms":[{"name":"increased mutation rate","type":"exact"},{"name":"mutator during mitotic cell cycle","type":"related"},{"name":"mutator during vegetative growth","type":"exact"}],"termid":"FYPO:0000256"}


id: PR:000025004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm2","pombase_gene_id":"SPAC513.03","synonyms":[{"name":"mfm2","type":"exact"}],"termid":"PR:000025004"}


id: MONDO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an implantation defect of genetic origin (obsolete MONDO:0018414)","secondary_identifiers":["ICD10CM:N97.2","Orphanet:400025"],"termid":"MONDO:0018414","xrefs":{"Monarch":{"xref_id":"0018414"}}}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: MONDO:0020788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypomagnesemia, seizures, and intellectual disability","termid":"MONDO:0014631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"hypomagnesemia, seizures, and intellectual disability 2","secondary_identifiers":["OMIM:618314","MEDGEN:1675904","UMLS:C5193023"],"synonyms":[{"name":"HOMGSMR2","type":"related"},{"name":"HYPOMAGNESEMIA, SEIZURES, AND MENTAL RETARDATION 2","type":"related"}],"termid":"MONDO:0020788","xrefs":{"Monarch":{"xref_id":"0020788"}}}


id: PBO:0089704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER fusion GTPase, atlastin Sey1","termid":"PBO:0089704"}


id: PBO:0027287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027287"}


id: GO:1902806
data:
  {"annotated_genes":["SJAG_03591","SJAG_04140","SJAG_02810","SJAG_03699","SJAG_02404","SJAG_00071","SJAG_02723","SJAG_03681","SJAG_01311","SJAG_00991","SJAG_01401","SJAG_02026","SJAG_01825","SJAG_01210","SJAG_03048","SJAG_00169","SJAG_00996","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102362,108905,115928,101625,88898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[91273,109684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[92127,98873,91707,93299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[109200,105985,117097,106669,102377,105830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[74768,108911,76678,115930,115364,91713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902806","terms_by_termid":{"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PBO:0060963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold","termid":"PBO:0060963"}


id: PBO:0003589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter (predicted)","termid":"PBO:0003589"}


id: PBO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L4A antisense RNA 1","termid":"PBO:0046399"}


id: MONDO:0017150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with another disease is a group of conditions that lead to PAH; connective tissue diseases (lupus erythematosus, systemic sclerosis and mixed connective tissues disease), congenital heart disease (Eisenmenger syndrome), HIV infection, portal hypertension, schistosomiasis and chronic hemolytic anemia, which is characterized by elevated pulmonary arterial resistance leading to right heart failure that is progressive and potentially fatal.","definition_xrefs":["Orphanet:275791"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with another disease (obsolete MONDO:0017150)","secondary_identifiers":["NANDO:2201048"],"synonyms":[{"name":"PAH associated with another disease","type":"exact"},{"name":"secondary PAH","type":"exact"}],"termid":"MONDO:0017150","xrefs":{"Monarch":{"xref_id":"0017150"}}}


id: PBO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta Rev7 (predicted)","termid":"PBO:0003997"}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02094","PRO:DNx","PANTHER:PTHR10743:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: GO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in differentiation (obsolete GO:0000904)","termid":"GO:0000904"}


id: PBO:0065601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleiotrophin","termid":"PBO:0065601"}


id: FYECO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which N-acetyl-L-cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ N-acetyl-L-cysteine","synonyms":[{"name":"NAC added","type":"exact"},{"name":"acetylcysteine added","type":"exact"}],"termid":"FYECO:0000119"}


id: GO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an inner ear receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell fate commitment","synonyms":[{"name":"inner ear hair cell fate commitment","type":"exact"}],"termid":"GO:0060120"}


id: PBO:0004684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Spo4","termid":"PBO:0004684"}


id: GO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of torque on particles such as magnetite which respond to a magnetic field.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of mechanical stimulus","termid":"GO:0050979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"magnetoreception, detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of mechanical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050971"}


id: PBO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 divergent transcript","termid":"PBO:0052602"}


id: PBO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase, tRNA N6-threonyl-carbamoyl-adenosine (t6A), a modification protein Pgp1","termid":"PBO:0018165"}


id: PBO:0039915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 15","termid":"PBO:0039915"}


id: PBO:0085963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the growth defect of mutants lacking protein kinase A activity; involved in cAMP-mediated signaling; localized to the nucleus; similar to the mouse testis-specific protein PBS13","termid":"PBO:0085963"}


id: GO:0004876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3a product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:pg","GOC:mah","GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C3a receptor activity","secondary_identifiers":["GO:0004943"],"synonyms":[{"name":"C3a anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004876"}


id: GO:1902665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isobutanol stimulus.","definition_xrefs":["GOC:mengo_curators","PMID:24014527","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isobutanol","secondary_identifiers":["GO:1990337"],"synonyms":[{"name":"process resulting in tolerance to isobutanol","type":"narrow"},{"name":"response to 2-methylpropan-1-ol","type":"exact"}],"termid":"GO:1902665"}


id: PBO:0064346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A4","termid":"PBO:0064346"}


id: MONDO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to benign or malignant mesenchymal neoplasms characterized by the presence of neoplastic spindle-shaped to round cells arranged around thin-walled branching vascular spaces.","definition_xrefs":["NCIT:C3087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"hemangiopericytic tumor","termid":"MONDO:0002789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytoma","secondary_identifiers":["MEDGEN:5478","DOID:264","ICDO:9150/1","MESH:D006393","SCTID:134335004","UMLS:C0018922"],"synonyms":[{"name":"haemangiopericytic meningioma","type":"exact"},{"name":"haemangiopericytic meningioma [obs]","type":"exact"},{"name":"hemangiopericytoma","type":"exact"},{"name":"hemangiopericytoma, malignant (morphologic abnormality)","type":"narrow"},{"name":"malignant hemangiopericytoma","type":"narrow"}],"termid":"MONDO:0005094","xrefs":{"Monarch":{"xref_id":"0005094"}}}


id: GO:0019374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactolipid metabolic process","synonyms":[{"name":"galactolipid metabolism","type":"exact"}],"termid":"GO:0019374"}


id: GO:0102491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dGTP + 2 H2O = dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dGTP phosphohydrolase activity (obsolete GO:0102491)","termid":"GO:0102491"}


id: PBO:0081867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 805","termid":"PBO:0081867"}


id: PBO:0081879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 826, pseudogene","termid":"PBO:0081879"}


id: PBO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc14-related protein phosphatase Clp1/Flp1","termid":"PBO:0002680"}


id: GO:1904414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19590510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"positively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac ventricle development","synonyms":[{"name":"activation of cardiac ventricle development","type":"narrow"},{"name":"up regulation of cardiac ventricle development","type":"exact"},{"name":"up-regulation of cardiac ventricle development","type":"exact"},{"name":"upregulation of cardiac ventricle development","type":"exact"}],"termid":"GO:1904414"}


id: PBO:0052485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 10","termid":"PBO:0052485"}


id: FYPO:0004281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of xanthine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal xanthine DNA N-glycosylase activity","termid":"FYPO:0004281"}


id: PBO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51delta single mutant","termid":"PBO:0001352"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: GO:0141170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway.","definition_xrefs":["PMID:36478523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141170"}


id: PBO:0038878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 5","termid":"PBO:0038878"}


id: GO:2000606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"}


id: PBO:0004943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr8","termid":"PBO:0004943"}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: GO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the phagosome, measured by the concentration of the hydrogen ion, as part of the process of phagosome maturation.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome reneutralization","synonyms":[{"name":"phagosomal reneutralization","type":"exact"},{"name":"phagosome pH elevation","type":"exact"}],"termid":"GO:0044655"}


id: PBO:0062935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 1","termid":"PBO:0062935"}


id: MONDO:0004387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic and self-limited condition that occurs during pregnancy. It is characterized by proliferation of luteinized stromal cells that replace the normal ovarian stromal cells. It is usually manifested with bilateral multinodular ovarian masses. Treatment is not required.","definition_xrefs":["NCIT:C40445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luteoma of pregnancy","secondary_identifiers":["MEDGEN:137726","MESH:D018311","UMLS:C0334209","DOID:7880"],"synonyms":[{"name":"leuteoma of pregnancy","type":"exact"},{"name":"luteoma","type":"exact"}],"termid":"MONDO:0004387","xrefs":{"Monarch":{"xref_id":"0004387"}}}


id: PBO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp15","termid":"PBO:0003367"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


id: PBO:0002694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor Sec24/Sfb2 subunit","termid":"PBO:0002694"}


id: PBO:0049452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 6","termid":"PBO:0049452"}


id: PR:P41000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cps3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cps3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.02","synonyms":[{"name":"Spom972h-cps3","type":"exact"},{"name":"meiotically up-regulated gene 188 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41000"}


id: PBO:0054256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1640","termid":"PBO:0054256"}


id: PBO:0054003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1331","termid":"PBO:0054003"}


id: GO:0050838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of 5-hydroxy-L-lysine to form peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0359"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-5-hydroxy-L-lysine trimethylation (obsolete GO:0050838)","termid":"GO:0050838"}


id: PBO:0076191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 2","termid":"PBO:0076191"}


id: PBO:0062920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidinergic receptor P2Y6","termid":"PBO:0062920"}


id: PBO:0076799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEK receptor tyrosine kinase","termid":"PBO:0076799"}


id: PBO:0079962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 Y-linked","termid":"PBO:0079962"}


id: PBO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130 (predicted)","termid":"PBO:0002329"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: GO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ morphogenesis (obsolete GO:0048563)","termid":"GO:0048563"}


id: PBO:0046461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophil peroxidase","termid":"PBO:0046461"}


id: GO:0007376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a partial necklace of inturning tissue on the lateral sides of the embryo, along the dorsal-ventral axis. This furrow demarcates head from thorax in the developing protostome.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cephalic furrow formation","termid":"GO:0007376"}


id: GO:0008046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.","definition_xrefs":["PMID:15107857","PMID:15339666","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"axon guidance receptor activity","synonyms":[{"name":"receptor activity involved in axon guidance","type":"exact"}],"termid":"GO:0008046"}


id: PBO:0050144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3","termid":"PBO:0050144"}


id: PBO:0090801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Spo14","termid":"PBO:0090801"}


id: MONDO:0030905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 117","secondary_identifiers":["MEDGEN:1747842","GARD:22665","OMIM:619174","UMLS:C5436937"],"synonyms":[{"name":"DFNB117","type":"narrow"},{"name":"deafness, autosomal recessive 117","type":"narrow"}],"termid":"MONDO:0030905","xrefs":{"Monarch":{"xref_id":"0030905"}}}


id: PBO:0004326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family","termid":"PBO:0004326"}


id: MONDO:0019647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital megacalycosis","termid":"MONDO:0019639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital bilateral megacalycosis","secondary_identifiers":["UMLS:C5681455","Orphanet:93177","GARD:19180","MEDGEN:1842447"],"termid":"MONDO:0019647","xrefs":{"Monarch":{"xref_id":"0019647"}}}


id: PBO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0001736"}


id: PBO:0029225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing","termid":"PBO:0029225"}


id: PBO:0069762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1045, pseudogene","termid":"PBO:0069762"}


id: GO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethyl sulfide + H+ + NADH + O2 = formaldehyde + H2O + methanethiol + NAD+.","definition_xrefs":["RHEA:31355","PMID:21216999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dimethyl sulfide monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0208","EC:1.14.13.131"],"synonyms":[{"name":"dimethyl sulphide monooxygenase activity","type":"exact"}],"termid":"GO:0018633"}


id: PBO:0116816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F10 antisense RNA 2","termid":"PBO:0116816"}


id: PBO:0090887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1","termid":"PBO:0090887"}


id: PBO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein Bis1","termid":"PBO:0005155"}


id: PBO:0045023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 3","termid":"PBO:0045023"}


id: MONDO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from the excessive retention of water with sodium depletion.","definition_xrefs":["MESH:D014869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water intoxication","secondary_identifiers":["MEDGEN:53061","UMLS:C0043049","SCTID:71785001"],"synonyms":[{"name":"WATER INTOX","type":"related"},{"name":"Water Intoxication","type":"related"},{"name":"Water intoxication","type":"related"},{"name":"Water intoxication syndrome","type":"related"},{"name":"water intoxication syndrome","type":"exact"}],"termid":"MONDO:0022007","xrefs":{"Monarch":{"xref_id":"0022007"}}}


id: PBO:0053413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 351","termid":"PBO:0053413"}


id: PBO:0074030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18","termid":"PBO:0074030"}


id: GO:0160121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 3-acyl-sn-glycero-1-phospho-(1'-sn-glycerol) = 3-acyl-sn-glycero-1-phospho-(3'-acyl-1'-sn-glycerol) + sn-glycero-1-phospho-(1'-sn-glycerol).","definition_xrefs":["PMID:37708259","RHEA:77619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bis(monoacylglycero)phosphate synthase activity","termid":"GO:0160121"}


id: PBO:0046217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 10","termid":"PBO:0046217"}


id: GO:0046938
data:
  {"annotated_genes":["SJAG_04516","SJAG_02599","SJAG_01351","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70718,93281,97001,108451],"is_not":false,"summary":null,"term":"GO:0046938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytochelatin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin biosynthetic process","type":"related"},{"name":"phytochelatin anabolism","type":"exact"},{"name":"phytochelatin biosynthesis","type":"exact"},{"name":"phytochelatin formation","type":"exact"},{"name":"phytochelatin synthesis","type":"exact"}],"termid":"GO:0046938","terms_by_termid":{"GO:0046938":null}}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: PBO:0113023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional DNA-directed DNA polymerase/deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0113023"}


id: MONDO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cattle caused by parasitization of the red blood cells by bacteria of the genus ANAPLASMA.","definition_xrefs":["MESH:D000712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis in cattle","synonyms":[{"name":"Anaplasmoses","type":"related"}],"termid":"MONDO:0044748","xrefs":{"Monarch":{"xref_id":"0044748"}}}


id: PBO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methionine_import","termid":"PBO:0030109"}


id: PBO:0087137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that activates mRNA decapping directly; binds to mRNA substrate and enhances activity of decapping proteins Dcp1p and Dcp2p; has a role in translation during heat stress; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; EDC1 has a paralog, EDC2, that arose from the whole genome duplication","termid":"PBO:0087137"}


id: FYPO:0000759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lead ions. Cells stop growing (and may die) at a concentration of lead ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to lead","synonyms":[{"name":"hypersensitive to lead","type":"exact"},{"name":"sensitive to lead during mitotic cell cycle","type":"related"},{"name":"sensitive to lead during vegetative growth","type":"exact"},{"name":"sensitive to lead ions","type":"exact"}],"termid":"FYPO:0000759"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: MONDO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caroli disease (CD) is a rare congenital liver disease characterized by non-obstructive cystic dilatations of the intra-hepatic and rarely extra-hepatic bile ducts.","definition_xrefs":["Orphanet:53035"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","termid":"MONDO:0015509"},{"relation_name":"is_a","term_name":"non-neoplastic bile duct disorder","termid":"MONDO:0006322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Caroli disease","secondary_identifiers":["DOID:0050876","SCTID:717232005","UMLS:C0162510","EFO:1001286","GARD:6002","MESH:D016767","icd11.foundation:1757434239","MedDRA:10013003","MEDGEN:57924","NCIT:C84619","NANDO:2200934","NORD:896","OMIM:600643"],"synonyms":[{"name":"CAROLI disease, isolated","type":"related"},{"name":"Caroli disease isolated","type":"related"},{"name":"congenital polycystic dilatation of intrahepatic bile ducts","type":"related"},{"name":"cystic dilatation of the intrahepatic biliary tree","type":"related"}],"termid":"MONDO:0010913","xrefs":{"Monarch":{"xref_id":"0010913"}}}


id: GO:1904415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenophagy.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:pad","PMID:21617041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of xenophagy","termid":"GO:1904415"}


id: GO:0000347
data:
  {"annotated_genes":["SJAG_04115","SJAG_05328","SJAG_04310","SJAG_04202","SJAG_00992","SJAG_04536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64169,101867,75903,111133,76530,118954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex is a nuclear complex that is required for transcription elongation through genes containing tandemly repeated DNA sequences. The THO complex is also part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1p, Tho2p, Thp1p, and Mft1p, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:11979277","GOC:krc","PMID:16983072","PMID:11060033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"THO complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000347","terms_by_termid":{"GO:0000445":null}}


id: PBO:0073322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 5","termid":"PBO:0073322"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: PBO:0087502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex that binds directly to central component Vid30p; GID complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; Gid7p contains six WD40 repeats; computational analysis suggests that Gid7p and Moh1p have similar functions","termid":"PBO:0087502"}


id: PBO:0066611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 2","termid":"PBO:0066611"}


id: GO:0043294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, found in the mitochondria, that in yeast consists of a large and a small subunit. Possesses glutamate synthase (NADH) activity.","definition_xrefs":["GOC:jl","PMID:7047525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex (NADH)","termid":"GO:0031027"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial glutamate synthase complex (NADH)","termid":"GO:0043294"}


id: GO:1902124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-pinoresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-pinoresinol metabolic process","synonyms":[{"name":"(+)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1902124"}


id: RO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of preys on","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preyed_upon_by","termid":"RO:0002458"}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:23911929","PubMed:22116028","RESID:AA0581","PubMed:21406390","ChEBI:45764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: FYPO:0001162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal under aerobic conditions and in a medium containing raffinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on raffinose carbon source","synonyms":[{"name":"decreased aerobic cell growth on raffinose carbon source","type":"narrow"},{"name":"decreased growth on raffinose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on raffinose carbon source","type":"exact"},{"name":"reduced cell growth on raffinose carbon source","type":"exact"},{"name":"slow aerobic cell growth on raffinose carbon source","type":"narrow"}],"termid":"FYPO:0001162"}


id: PBO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 4","termid":"PBO:0060798"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: PBO:0082027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082027"}


id: PBO:0031061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination","termid":"PBO:0031061"}


id: PBO:0061011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicolin 1, tubulin polyglutamylase complex subunit","termid":"PBO:0061011"}


id: GO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune system process that functions in the response of an organism to a tumor cell.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response to tumor cell","termid":"GO:0002418"}


id: PBO:0041588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 3","termid":"PBO:0041588"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","GO_REF:0000059","GOC:TermGenie","PMID:22995177"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein kinase activity (obsolete GO:1904029)","termid":"GO:1904029"}


id: GO:1902844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of canonical Wnt signaling pathway that results in positive regulation of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:11262869","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway (obsolete GO:1902844)","synonyms":[{"name":"activation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"narrow"},{"name":"activation of spinal cord dorsal interneuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"narrow"},{"name":"positive regulation of spinal cord dorsal interneuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"up regulation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"up regulation of spinal cord dorsal interneuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"up-regulation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"up-regulation of spinal cord dorsal interneuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"upregulation of spinal cord association neuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"},{"name":"upregulation of spinal cord dorsal interneuron differentiation by negative regulation of canonical Wnt signaling pathway","type":"exact"}],"termid":"GO:1902844"}


id: PBO:0091323
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0091323"}


id: MONDO:0020755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart block (obsolete MONDO:0020755)","secondary_identifiers":["SCTID:233916004"],"termid":"MONDO:0020755","xrefs":{"Monarch":{"xref_id":"0020755"}}}


id: PBO:0069747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1028, pseudogene","termid":"PBO:0069747"}


id: PBO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 4","termid":"PBO:0050969"}


id: MONDO:1012363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy of the diaphragmatic muscles, non-human animal","termid":"MONDO:1011797"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy of the diaphragmatic muscles, cattle","secondary_identifiers":["OMIA:001319-9913"],"termid":"MONDO:1012363","xrefs":{"Monarch":{"xref_id":"1012363"}}}


id: MONDO:1012141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple lipomatosis, non-human animal","termid":"MONDO:1011809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, dog","secondary_identifiers":["OMIA:000606-9615"],"termid":"MONDO:1012141","xrefs":{"Monarch":{"xref_id":"1012141"}}}


id: PBO:0049700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUWE1 associated protein modifying stress responses 2","termid":"PBO:0049700"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: PBO:0075955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM binding protein","termid":"PBO:0075955"}


id: PBO:0004415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk24","termid":"PBO:0004415"}


id: GO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-N-acetyl-D-galactosalaminyl-[protein] + UDP-N-acetyl-D-glucosamine = 3-O-N-acetyl-beta-D-glucosaminyl-1,3-N-acetyl-D-galactosaminyl-[protein] + UDP. Linkage of the glycan to the protein occurs via the oxygen atom in the side chain of an L-serine or L-threonine residue.","definition_xrefs":["EC:2.4.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.147-RXN"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"core 3-beta-GlcNAc-transferase activity","type":"related"},{"name":"core 3beta-GlcNAc-transferase activity","type":"related"},{"name":"mucin core 3 beta3-GlcNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047224"}


id: GO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell antigen processing and presentation","synonyms":[{"name":"regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"regulation of B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002622"}


id: MONDO:0017870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular pulmonary stenosis","secondary_identifiers":["UMLS:C3280212","GARD:4594","MEDGEN:481842","NANDO:2200278","Orphanet:3192"],"synonyms":[{"name":"pulmonary supravalvular stenosis","type":"related"}],"termid":"MONDO:0017870","xrefs":{"Monarch":{"xref_id":"0017870"}}}


id: MONDO:0009144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ebstein's malformation is a rare congenital cardiac anomaly characterized by rotational displacement of the septal and inferior leaflets of the tricuspid valve such that they are hinged within the right ventricle, rather than as expected at the atrioventricular junction.","definition_xrefs":["Orphanet:1880"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Ebstein anomaly","secondary_identifiers":["NANDO:2200260","EFO:0007244","MEDGEN:4435","NCIT:C84681","ICD9:746.2","NANDO:1200711","GARD:6313","MedDRA:10014075","NANDO:2100080","OMIM:224700","icd11.foundation:307157712","DOID:14289","MESH:D004437","UMLS:C0013481"],"synonyms":[{"name":"Ebstein anomaly","type":"exact"},{"name":"Ebstein anomaly (disease)","type":"exact"},{"name":"Ebstein anomaly of the tricuspid valve","type":"exact"},{"name":"Ebstein malformation","type":"related"},{"name":"Ebstein's anomaly","type":"exact"},{"name":"Ebstein's anomaly (disorder) [ambiguous]","type":"exact"},{"name":"Ebstein's anomaly of common atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of right atrioventricular valve","type":"exact"},{"name":"Ebstein's anomaly of tricuspid valve","type":"exact"},{"name":"Ebstein's malformation","type":"related"}],"termid":"MONDO:0009144","xrefs":{"Monarch":{"xref_id":"0009144"}}}


id: PBO:0088833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase","termid":"PBO:0088833"}


id: PBO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 2","termid":"PBO:0042812"}


id: GO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"positively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein phosphorylation","synonyms":[{"name":"activation of protein amino acid phosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid phosphorylation","type":"exact"},{"name":"stimulation of protein amino acid phosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid phosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"upregulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001934"}


id: PBO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps45","termid":"PBO:0000603"}


id: GO:0016925
data:
  {"annotated_genes":["SJAG_00604","SJAG_03843","SJAG_05032","SJAG_01776","SJAG_00727","SJAG_02082","SJAG_02503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72281,72333,75349,75380,75694,97746,114669],"is_not":false,"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:11265250","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein sumoylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016927","GO:0019951","GO:0006485","Wikipedia:SUMO_protein","GO:0019947","Reactome:R-HSA-2990846"],"synonyms":[{"name":"SUMO-protein conjugation","type":"exact"},{"name":"Smt3-protein conjugation","type":"related"},{"name":"Smt3p-protein conjugation","type":"related"},{"name":"protein sumolation","type":"exact"},{"name":"small ubiquitin-related protein 1 conjugation","type":"exact"},{"name":"sumoylation","type":"exact"}],"termid":"GO:0016925","terms_by_termid":{"GO:0016925":null}}


id: PBO:0113470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; C-terminal PH domain binds to phosphoinositide-(4,5)-bisphosphate (PI(4,5)P2); binds directly to Ypk2p a Tor2p substrate and downstream TORC2 effector through a conserved central CRIM domain; acts with Tsc11p as a scaffold important for the integrity of the TORC2 complex; dispensable for PM localization of TORC2; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0113470"}


id: GO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide catabolic process","synonyms":[{"name":"nitric oxide breakdown","type":"exact"},{"name":"nitric oxide catabolism","type":"exact"},{"name":"nitric oxide degradation","type":"exact"}],"termid":"GO:0046210"}


id: GO:0007130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013","GO:0044085"],"is_obsolete":false,"name":"synaptonemal complex assembly","synonyms":[{"name":"synaptonemal complex formation","type":"exact"}],"termid":"GO:0007130"}


id: MONDO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The subclinical or symptomatic stage of syphilis, occurring at an average of three weeks after contact with an infected individual. It manifests with one or more painless, indurated ulcers (chancres) of the skin or mucous membranes at the site of inoculation. These lesions heal spontaneously within a few weeks.","definition_xrefs":["NCIT:C128412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syphilis","secondary_identifiers":["ICD9:091","UMLS:C2931317","MEDGEN:419772","MESH:C536772","DOID:4156","SCTID:186846005"],"synonyms":[{"name":"early symptomatic syphilis","type":"exact"},{"name":"early syphilis, symptomatic","type":"exact"},{"name":"symptomatic early syphilis","type":"exact"}],"termid":"MONDO:0002896","xrefs":{"Monarch":{"xref_id":"0002896"}}}


id: PBO:0017635
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan Syndrome","termid":"PBO:0017635"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[119327,119328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["GO:0000920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_02252","SJAG_03143","SJAG_03444"],"single_locus_genotype_uniquenames":["sep1delta","agn1delta","ace2delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: GO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = thromboxane A(2).","definition_xrefs":["RHEA:17137","EC:5.3.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"thromboxane-A synthase activity","secondary_identifiers":["KEGG_REACTION:R02268","GO:0008400","Reactome:R-HSA-5603275","Reactome:R-HSA-76500","MetaCyc:THROMBOXANE-A-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity","type":"related"},{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity","type":"related"},{"name":"cytochrome P450 CYP5","type":"narrow"},{"name":"thromboxane synthase activity","type":"related"},{"name":"thromboxane synthetase activity","type":"related"}],"termid":"GO:0004796"}


id: PATO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000522 herbicide sensitivity value (obsolete PATO:0000522)","termid":"PATO:0000522"}


id: PBO:0074011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 2","termid":"PBO:0074011"}


id: PR:O13715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug5 gene.","definition_xrefs":["UniProtKB:O13715","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 5 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.08","synonyms":[{"name":"Spom972h-mug5","type":"exact"}],"termid":"PR:O13715"}


id: MOD:00991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(sn-1-glyceryl)-L-cysteine","termid":"MOD:00991"}


id: GO:0071359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dsRNA","termid":"GO:0043331"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsRNA","synonyms":[{"name":"cellular response to double-stranded RNA","type":"exact"}],"termid":"GO:0071359"}


id: MONDO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the larynx caused by viruses, including rhinovirus, influenza virus, parainfluenza virus, and adenovirus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute laryngitis","termid":"MONDO:0004777"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral laryngitis","secondary_identifiers":["NCIT:C27305","DOID:3436","UMLS:C0853195","ICD9:464.00","SCTID:441551009","MEDGEN:167276"],"synonyms":[{"name":"Viruses caused laryngitis","type":"exact"},{"name":"Viruses laryngitis","type":"exact"}],"termid":"MONDO:0002646","xrefs":{"Monarch":{"xref_id":"0002646"}}}


id: GO:0033113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a cyanelle and form the cyanelle envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle membrane","termid":"GO:0033113"}


id: GO:0000452
data:
  {"annotated_genes":["SJAG_02377","SJAG_00744","SJAG_03410","SJAG_00943","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94098,98790,108105,110216,111363],"is_not":false,"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 2'-O-methylation","termid":"GO:0000451"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA guided rRNA 2'-O-ribose methylation","type":"related"}],"termid":"GO:0000452","terms_by_termid":{"GO:0000452":null}}


id: PATO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having high amount of amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-glutinous","termid":"PATO:0001541"}


id: PBO:0088954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic proline-tRNA ligase Prs1","termid":"PBO:0088954"}


id: GO:1902152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cell cycle checkpoint signaling","termid":"GO:1902146"},{"relation_name":"is_a","term_name":"regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902151"},{"relation_name":"positively_regulates","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA integrity checkpoint signaling","synonyms":[{"name":"activation of DNA integrity checkpoint effector process","type":"exact"},{"name":"activation of response to DNA integrity checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"positive regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up-regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"upregulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:1902152"}


id: PBO:0081961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida binding protein","termid":"PBO:0081961"}


id: PBO:0057488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 606","termid":"PBO:0057488"}


id: PBO:0076962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor associated protein 1","termid":"PBO:0076962"}


id: GO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Crater-like ring of chitinous scar tissue located on the surface of the mother cell. It is formed after the newly emerged daughter cell separates thereby marking the site of cytokinesis and septation. The number of bud scars that accumulate on the surface of a cell is a useful determinant of replicative age.","definition_xrefs":["PMID:14600225","PMID:2005820","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"cellular bud scar","termid":"GO:0005621"}


id: GO:0070380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high mobility group box 1 (HMBGB1) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","PMID:18431461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"high mobility group box 1 receptor activity","synonyms":[{"name":"HMGB1 receptor activity","type":"exact"}],"termid":"GO:0070380"}


id: PBO:0090316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Esc1","termid":"PBO:0090316"}


id: MONDO:0010568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aicardi syndrome is a rare neurodevelopmental disorder defined by the triad of agenesis of the corpus callosum (total or partial), typical chorioretinal lacunae and infantile spasms that affect almost exclusively females.","definition_xrefs":["Orphanet:50"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Aicardi syndrome","secondary_identifiers":["NANDO:1200562","icd11.foundation:2057245946","MESH:D058540","OMIM:304050","DOID:8461","SCTID:80651009","NCIT:C35256","MedDRA:10054935","UMLS:C0175713","GARD:5764","MEDGEN:61236","NORD:745"],"synonyms":[{"name":"AIC","type":"exact"},{"name":"Aicardi syndrome","type":"exact"},{"name":"Aicardi syndrome, X-linked dominant","type":"exact"},{"name":"Aicardi’s syndrome","type":"exact"},{"name":"agenesis of corpus callosum with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum agenesis of with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum, agenesis of, with chorioretinal abnormality","type":"exact"}],"termid":"MONDO:0010568","xrefs":{"Monarch":{"xref_id":"0010568"}}}


id: GO:2000041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in axis elongation (obsolete GO:2000041)","termid":"GO:2000041"}


id: FYPO:0001267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur when the cell is subject to a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear export during cellular hypotonic salinity response","synonyms":[{"name":"abolished nuclear export during cellular hypotonic salinity response during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during cellular hypotonic salinity response","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to salt starvation abolished","type":"exact"}],"termid":"FYPO:0001267"}


id: GO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetylcholine binding","termid":"GO:0042166"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03486","SJAG_03802","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116167,116505,118256],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["PMID:23010169","GOC:pad","GOC:dph","GOC:PARL","PMID:24709372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["UniProtKB:O74984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: PBO:0055890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 9","termid":"PBO:0055890"}


id: FYPO:0002160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cilofungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cilofungin","synonyms":[{"name":"normal cell population growth in presence of cilofungin","type":"exact"},{"name":"normal cell population growth on cilofungin","type":"exact"},{"name":"normal cellular response to cilofungin","type":"related"},{"name":"normal vegetative cell population growth on cilofungin","type":"exact"}],"termid":"FYPO:0002160"}


id: GO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central tolerance induction","termid":"GO:0002646"}


id: PBO:0029773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_cells_with_abnormal_morphology_(obsolete_FYPO:0002466)","termid":"PBO:0029773"}


id: PBO:0074890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 65C","termid":"PBO:0074890"}


id: MONDO:0016165
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"An instance of hypoparathyroidism that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism","termid":"MONDO:0001220"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary hypoparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20407","MEDGEN:1842344","Orphanet:208593","UMLS:C5680825"],"synonyms":[{"name":"genetic hypoparathyroidism","type":"exact"}],"termid":"MONDO:0016165","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0016165"}}}


id: PBO:0111815
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0111815"}


id: GO:0046219
data:
  {"annotated_genes":["SJAG_02505","SJAG_01455","SJAG_03167","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74171,79226,73199,77154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indolalkylamine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-209931"],"synonyms":[{"name":"indolalkylamine anabolism","type":"exact"},{"name":"indolalkylamine biosynthesis","type":"exact"},{"name":"indolalkylamine formation","type":"exact"},{"name":"indolalkylamine synthesis","type":"exact"}],"termid":"GO:0046219","terms_by_termid":{"GO:0000162":null}}


id: MONDO:0010733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia type 2 (SPG2) is an X-linked leukodystrophy characterized primarily by spastic gait and autonomic dysfunction. When additional central nervous system (CNS) signs, such as intellectual deficit, ataxia, or extrapyramidal signs, are present, the syndrome is referred to as complicated SPG.","definition_xrefs":["Orphanet:99015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 2","secondary_identifiers":["DOID:0110773","GARD:4923","OMIM:312920","MEDGEN:374177","UMLS:C1839264","SCTID:723622007"],"synonyms":[{"name":"PLP1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG2","type":"exact"},{"name":"Sppx2","type":"related"},{"name":"X-linked spastic paraplegia 2","type":"exact"},{"name":"X-linked spastic paraplegia type 2","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in PLP1","type":"exact"},{"name":"hereditary spastic paraplegia type 2","type":"exact"},{"name":"spastic gait type 2","type":"exact"},{"name":"spastic paraparesis type 2","type":"exact"},{"name":"spastic paraplegia 2","type":"related"},{"name":"spastic paraplegia 2, X-linked","type":"related"},{"name":"spastic paraplegia 2, X-linked, X-linked recessive","type":"exact"},{"name":"spastic paraplegia type 2","type":"exact"}],"termid":"MONDO:0010733","xrefs":{"Monarch":{"xref_id":"0010733"}}}


id: PBO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Ufd2 (predicted)","termid":"PBO:0017632"}


id: PBO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe Repressor of Activation","termid":"PBO:0013014"}


id: GO:0102484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose(2-) = esculin + UDP(3-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin glucosyltransferase activity (obsolete GO:0102484)","termid":"GO:0102484"}


id: GO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase","termid":"GO:0051322"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0000087","GO:0008150"],"is_obsolete":false,"name":"mitotic anaphase","termid":"GO:0000090"}


id: PBO:0026803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026803"}


id: MONDO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thyroid hormone metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inherited thyroid metabolism disease","secondary_identifiers":["MEDGEN:543589","SCTID:36985004","ICD9:246.8","UMLS:C0271824"],"synonyms":[{"name":"inborn error of thyroid hormone metabolic process","type":"exact"},{"name":"inborn thyroid hormone metabolic process disorder","type":"exact"},{"name":"inherited disorder of thyroid metabolism","type":"exact"},{"name":"rare inborn error of thyroid hormone metabolic process","type":"exact"}],"termid":"MONDO:0045046","xrefs":{"Monarch":{"xref_id":"0045046"}}}


id: PBO:0082040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-enoyl thioester reductase; member of the medium chain dehydrogenase/reductase family; localized to mitochondria, where it has a probable role in fatty acid synthesis; human MECR functionally complements the respiratory growth defect of the null mutant","termid":"PBO:0082040"}


id: GO:0060745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized as a part of pregnancy.","definition_xrefs":["GOC:dph","PMID:19261859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"maternal process involved in female pregnancy","termid":"GO:0060135"},{"relation_name":"is_a","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}


id: GO:0061524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of the central canal of the spinal cord from its formation to the mature structure. The central canal is a spinal cord structure that is part of the ventricular system and is filled with cerebral-spinal fluid and runs the length of the spinal cord.","definition_xrefs":["GOC:cvs","GOC:dph","PMID:23409159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central canal development","termid":"GO:0061524"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: GO:0034396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter in response to an iron stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:0034396)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter in response to iron","type":"exact"}],"termid":"GO:0034396"}


id: PBO:0061502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurensin 1","termid":"PBO:0061502"}


id: PBO:0067102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 144, pseudogene","termid":"PBO:0067102"}


id: GO:0086040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a cardiac muscle cell membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out). This transfer contributes to the regulation of the cardiac muscle cell plasma membrane potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium:proton antiporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"sodium:hydrogen antiporter activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086040"}


id: MONDO:0971125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"torpedo maculopathy","secondary_identifiers":["MEDGEN:1863888","UMLS:C5891237","Orphanet:674935"],"termid":"MONDO:0971125","xrefs":{"Monarch":{"xref_id":"0971125"}}}


id: PBO:0005118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 associated factor 2, Laf2","termid":"PBO:0005118"}


id: GO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to chymotrypsin C.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin G activity (obsolete GO:0004261)","synonyms":[{"name":"cathepsin G activity","type":"exact"},{"name":"chymotrypsin-like proteinase activity","type":"related"},{"name":"neutral proteinase activity","type":"related"}],"termid":"GO:0004261"}


id: MONDO:0020384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Niemann-Pick disease, type E is a poorly defined adult-onset and non-neuronopathic form of Niemann-Pick disease.","definition_xrefs":["Orphanet:99022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease","termid":"MONDO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"Niemann-Pick disease type E","secondary_identifiers":["MEDGEN:82781","SCTID:73399005","UMLS:C0268248"],"termid":"MONDO:0020384","xrefs":{"Monarch":{"xref_id":"0020384"}}}


id: PBO:0081426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280D","termid":"PBO:0081426"}


id: PBO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 38","termid":"PBO:0060050"}


id: PBO:0041624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding tyrosine phosphorylation regulated pseudogene 1","termid":"PBO:0041624"}


id: PBO:0090463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Dis3","termid":"PBO:0090463"}


id: MONDO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade ependymoma","secondary_identifiers":["Orphanet:251633","icd11.foundation:641455939"],"termid":"MONDO:0016697","xrefs":{"Monarch":{"xref_id":"0016697"}}}


id: GO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligosaccharide-diphosphodolichol = dolichol-phosphate + oligosaccharide phosphate.","definition_xrefs":["EC:3.6.1.44","MetaCyc:3.6.1.44-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide-diphosphodolichol diphosphatase activity","secondary_identifiers":["RHEA:15205"],"synonyms":[{"name":"oligosaccharide-diphosphodolichol phosphodolichohydrolase activity","type":"related"},{"name":"oligosaccharide-diphosphodolichol pyrophosphatase activity","type":"exact"}],"termid":"GO:0047430"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: PBO:0047398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 36 pseudogene 1","termid":"PBO:0047398"}


id: GO:0010970
data:
  {"annotated_genes":["SJAG_00113","SJAG_05266","SJAG_04597","SJAG_00851","SJAG_02336","SJAG_02731","SJAG_00368","SJAG_02286","SJAG_02431","SJAG_03540","SJAG_01863","SJAG_02761","SJAG_01211","SJAG_02737","SJAG_01546","SJAG_01775","SJAG_01371","SJAG_02651","SJAG_03673","SJAG_05185","SJAG_00397","SJAG_01370","SJAG_02561","SJAG_01662","SJAG_00918","SJAG_00594","SJAG_02045","SJAG_00140","SJAG_01224","SJAG_03437","SJAG_01613","SJAG_05220","SJAG_05319","SJAG_00332","SJAG_04143","SJAG_04001","SJAG_01297","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91116],"is_not":false,"summary":null,"term":"GO:0010970"},{"annotations":[87710,95178,91810,91351,111418,116968,113964,111064,100729,102968,97566,103260,90958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[111241,106602,101436],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97641,99234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[97568,87714,76333,91353,99235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94384],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[103750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[118695,100386,108281,103905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[96759,108902,109907,116942,98623,89702,89097,90946,114117,107519,100522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[104883,104550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transport along microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of localization by movement along microtubule","type":"exact"},{"name":"microtubule-based transport","type":"broad"},{"name":"movement along microtubule","type":"exact"}],"termid":"GO:0010970","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: PBO:0075821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS nuclear autoantigen 1","termid":"PBO:0075821"}


id: PBO:0053709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 917","termid":"PBO:0053709"}


id: PBO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase regulatory subunit (predicted)","termid":"PBO:0005691"}


id: GO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimer which acts as a quinolinate synthetase; quinolinate synthetase B (L-aspartate oxidase) catalyzes the oxidation of L-aspartate to L-iminoaspartate; quinolinate synthetase A condenses L-imidoaspartate and dihydroxyacetone to quinolinate.","definition_xrefs":["UniProtKB:P10902"],"gene_count":0,"genotype_count":0,"name":"obsolete quinolinate synthetase complex (obsolete GO:0019804)","synonyms":[{"name":"quinolinate synthetase complex","type":"exact"}],"termid":"GO:0019804"}


id: GO:0097454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small finger-like extension of a Schwann cell that contacts the nodal membrane.","definition_xrefs":["NIF_Subcellular:sao1890444066","PMID:15988042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schwann cell microvillus","termid":"GO:0097454"}


id: PBO:0068920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 163, pseudogene","termid":"PBO:0068920"}


id: MONDO:1011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia, non-human animal","secondary_identifiers":["OMIA:001171"],"termid":"MONDO:1011412","xrefs":{"Monarch":{"xref_id":"1011412"}}}


id: GO:0102664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-leucine + ATP = H+ + indole-3-acetyl-leucine + diphosphoric acid + AMP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-leucine synthetase activity (obsolete GO:0102664)","termid":"GO:0102664"}


id: PBO:0066355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 2","termid":"PBO:0066355"}


id: MONDO:0014358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","secondary_identifiers":["GARD:13409","DOID:0070055","MEDGEN:862856","OMIM:615829","Orphanet:412069","UMLS:C4014419"],"synonyms":[{"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","type":"exact"},{"name":"MRD25","type":"exact"},{"name":"Xia-Gibbs syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 25","type":"exact"},{"name":"autosomal dominant mental retardation 25","type":"exact"},{"name":"intellectual disability, autosomal dominant 25","type":"related"},{"name":"mental retardation, autosomal dominant 25","type":"related"}],"termid":"MONDO:0014358","xrefs":{"Monarch":{"xref_id":"0014358"}}}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: RO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_preceded_by","termid":"RO:0002258"}


id: PBO:0086159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proteasome assembly during quiescence; binds to base of the proteasome regulartory particle; required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086159"}


id: FYPO:0002727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of saccharopine dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal saccharopine dehydrogenase activity","termid":"FYPO:0002726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased saccharopine dehydrogenase activity","synonyms":[{"name":"reduced saccharopine dehydrogenase activity","type":"exact"}],"termid":"FYPO:0002727"}


id: GO:0009820
data:
  {"annotated_genes":["SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["GOC:lr","ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alkaloid metabolism","type":"exact"}],"termid":"GO:0009820","terms_by_termid":{"GO:0006769":null}}


id: GO:0051517
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90689],"is_not":false,"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of unidimensional cell growth","termid":"GO:0051511"},{"relation_name":"is_a","term_name":"regulation of bipolar cell growth","termid":"GO:0051516"},{"relation_name":"negatively_regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of bipolar cell growth","type":"exact"},{"name":"down-regulation of bipolar cell growth","type":"exact"},{"name":"downregulation of bipolar cell growth","type":"exact"},{"name":"inhibition of bipolar cell growth","type":"narrow"}],"termid":"GO:0051517","terms_by_termid":{"GO:0051517":null}}


id: MONDO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of prothrombin deficiency that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital prothrombin deficiency","termid":"MONDO:0013361"},{"relation_name":"is_a","term_name":"prothrombin deficiency","termid":"MONDO:0024307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired prothrombin deficiency","secondary_identifiers":["UMLS:C0392610","GARD:475","MEDGEN:140275","MESH:C538174","Orphanet:26348","SCTID:4152002","NCIT:C131622"],"synonyms":[{"name":"acquired factor II deficiency","type":"related"},{"name":"acquired hypoprothrombinemia","type":"exact"},{"name":"acquired prothrombin deficiency","type":"exact"},{"name":"hypoprothrombinemia, acquired","type":"related"}],"termid":"MONDO:0016990","xrefs":{"Monarch":{"xref_id":"0016990"}}}


id: MONDO:0006627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microscopic polyangiitis (obsolete MONDO:0006627)","termid":"MONDO:0006627","xrefs":{"Monarch":{"xref_id":"0006627"}}}


id: MONDO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by X-linked inheritance of slowly progressing neuropathy with onset in the first or second decade of life.","definition_xrefs":["DOID:0070159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory neuropathy X-linked","secondary_identifiers":["UMLS:C1839602","MEDGEN:333359","OMIM:310470","MESH:C564090"],"synonyms":[{"name":"neuropathy, hereditary sensory, X-linked","type":"related"}],"termid":"MONDO:0010688","xrefs":{"Monarch":{"xref_id":"0010688"}}}


id: PBO:0028411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chromium","termid":"PBO:0028411"}


id: FYPO:0002056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial translation","synonyms":[{"name":"decreased mitochondrial protein biosynthesis","type":"exact"},{"name":"decreased mitochondrial protein synthesis","type":"exact"},{"name":"decreased mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial translation during vegetative growth","type":"exact"},{"name":"decreased rate of mitochondrial protein synthesis","type":"related"},{"name":"reduced mitochondrial translation","type":"exact"}],"termid":"FYPO:0002056"}


id: GO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antisigma factor, a factor which inhibits the ability of the sigma factor to function as a transcriptional initiator.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"antisigma factor binding","synonyms":[{"name":"antisigma factor antagonist activity","type":"narrow"}],"termid":"GO:0045152"}


id: PBO:0024473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Spo20/Sec14","termid":"PBO:0024473"}


id: MOD:00743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a molybdenum atom or a cluster containing molybdenum for hydrogen atoms, or that coordinates a molybdenum ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum containing modified residue","synonyms":[{"name":"MoRes","type":"exact"}],"termid":"MOD:00743"}


id: MONDO:0850110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"melanoma in congenital melanocytic nevus","secondary_identifiers":["DOID:0070327","MEDGEN:313976","NCIT:C48613","UMLS:C1711221"],"termid":"MONDO:0850110","xrefs":{"Monarch":{"xref_id":"0850110"}}}


id: FYPO:0001265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular hyperosmotic response","synonyms":[{"name":"increased protein phosphorylation during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular hyperosmotic response during vegetative growth","type":"exact"}],"termid":"FYPO:0001265"}


id: PBO:0016928
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0016928"}


id: PBO:0085699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes","termid":"PBO:0085699"}


id: MONDO:0021632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary brain neoplasm","secondary_identifiers":["NCIT:C4952","NCIT:C170814","MEDGEN:152924","ONCOTREE:PBT","UMLS:C0750974"],"synonyms":[{"name":"primary brain neoplasm","type":"exact"},{"name":"primary brain tumor","type":"exact"},{"name":"primary brain tumour","type":"exact"}],"termid":"MONDO:0021632","xrefs":{"Monarch":{"xref_id":"0021632"}}}


id: GO:0010096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires sepal identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"sepal formation","termid":"GO:0048453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of sepal identity","termid":"GO:0010096"}


id: PBO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanistic target of rapamycin kinase","termid":"PBO:0060140"}


id: PBO:0036164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_associated_with_spindle","termid":"PBO:0036164"}


id: PBO:0040139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 2","termid":"PBO:0040139"}


id: PBO:0082144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene","termid":"PBO:0082144"}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: MONDO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bursitis that involves the olecranon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"},{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olecranon bursitis","secondary_identifiers":["MEDGEN:538225","SCTID:425940002","ICD9:726.33","UMLS:C0263962","ICD10CM:M70.2","DOID:12581"],"synonyms":[{"name":"Miners' elbow","type":"exact"},{"name":"bursitis of elbow","type":"exact"},{"name":"bursitis of elbow region","type":"exact"},{"name":"bursitis of olecranon","type":"exact"},{"name":"capped elbow","type":"exact"},{"name":"elbow bursitis","type":"exact"},{"name":"elbow bursitis (& olecranon)","type":"exact"},{"name":"miner's elbow","type":"exact"},{"name":"olecranon bursitis","type":"exact"},{"name":"shoe boil","type":"exact"}],"termid":"MONDO:0001557","xrefs":{"Monarch":{"xref_id":"0001557"}}}


id: PBO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1","termid":"PBO:0060522"}


id: MOD:01011
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-hydroxysuccinimide (ONSu, OSu)","termid":"MOD:01011"}


id: GO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methyl {[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-{[(2E)-3-phenylprop-2-enoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)propyl phosphonato]oxy}phosphonate = (R)-3-phenyllactoyl-CoA + trans-cinnamate.","definition_xrefs":["RHEA:15601","EC:2.8.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"cinnamoyl-CoA:phenyllactate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.17-RXN","KEGG_REACTION:R07796"],"synonyms":[{"name":"(E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase activity","type":"exact"},{"name":"FldA","type":"related"}],"termid":"GO:0043785"}


id: GO:0098861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments that is part of filopodium. Filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex.","definition_xrefs":["PMID:12566431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament bundle of filopodium","termid":"GO:0098861"}


id: GO:0033661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of reactive oxygen species produced by the host as part of its innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated defense to host-produced reactive oxygen species","synonyms":[{"name":"down regulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"down-regulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"downregulation by organism of defense-related host AOS production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROI production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROS production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"negative regulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"negative regulation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"suppression by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0033661"}


id: PBO:0082919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c heme lyase (holocytochrome c synthase); attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in mitochondrial intermembrane space; human homolog HCCS implicated in microphthalmia with linear skin defects (MLS), and can complement yeast null mutant","termid":"PBO:0082919"}


id: MONDO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of a glandular component exhibiting architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical atypical polypoid adenomyoma","secondary_identifiers":["MEDGEN:273123","DOID:8179","NCIT:C40234","UMLS:C1516409"],"termid":"MONDO:0004488","xrefs":{"Monarch":{"xref_id":"0004488"}}}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: GO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eclosion","synonyms":[{"name":"activation of eclosion","type":"narrow"},{"name":"stimulation of eclosion","type":"narrow"},{"name":"up regulation of eclosion","type":"exact"},{"name":"up-regulation of eclosion","type":"exact"},{"name":"upregulation of eclosion","type":"exact"}],"termid":"GO:0045805"}


id: GO:0140822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-35 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"NAD+-histone H2BE35 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E35 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E35 specific)","type":"exact"}],"termid":"GO:0140822"}


id: GO:0030545
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030546"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"signaling receptor regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor regulator activity","type":"broad"}],"termid":"GO:0030545","terms_by_termid":{"GO:0030546":null}}


id: GO:0046506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfolipid, a compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.","definition_xrefs":["PMID:9751667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"sulfolipid metabolic process","termid":"GO:0046505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sulfolipid biosynthetic process","synonyms":[{"name":"sulfolipid anabolism","type":"exact"},{"name":"sulfolipid biosynthesis","type":"exact"},{"name":"sulfolipid formation","type":"exact"},{"name":"sulfolipid synthesis","type":"exact"},{"name":"sulpholipid biosynthesis","type":"exact"},{"name":"sulpholipid biosynthetic process","type":"exact"}],"termid":"GO:0046506"}


id: PBO:0046051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 4","termid":"PBO:0046051"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: PBO:0112991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor in Kre33p-mediated N4-acetylcytidine modification of tRNAs; tRNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine (ac4C) in serine and leucine tRNAs but not required for the same modification in 18S rRNA; protein abundance increases in response to DNA replication stress; contains a conserved THUMP domain, and is homologous to human THUMPD1","termid":"PBO:0112991"}


id: PBO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-specific phosphodiesterase Cgs2","termid":"PBO:0005650"}


id: PBO:0078926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-2","termid":"PBO:0078926"}


id: GO:0015616
data:
  {"annotated_genes":["SJAG_02460","SJAG_00871","SJAG_03832","SJAG_00980"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70905,77681,103184,113409],"is_not":false,"summary":null,"term":"GO:0015616"}]},"cv_name":"molecular_function","definition":"Generation of movement along a single- or double-stranded DNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:17631491","GOC:mah","PMID:16428451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_00980":null,"SJAG_02460":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA translocase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015616","terms_by_termid":{"GO:0015616":null}}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: _global:adjacent_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A geometric operator, specified in Egenhofer 1989. Two features meet if they share a junction on the sequence. X adjacent_to Y iff X and Y share a boundary but do not overlap.","definition_xrefs":["PMID:20226267","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"_global:spatially_disjoint_from"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","secondary_identifiers":["RO:0002220"],"synonyms":[{"name":"adjacent to","type":"exact"}],"termid":"_global:adjacent_to"}


id: GO:1901847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00830","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate metabolic process","synonyms":[{"name":"nicotinate metabolism","type":"exact"}],"termid":"GO:1901847"}


id: GO:0120163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cold-induced thermogenesis","termid":"GO:0120161"},{"relation_name":"negatively_regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cold-induced thermogenesis","synonyms":[{"name":"negative regulation of CIT","type":"related"}],"termid":"GO:0120163"}


id: PBO:0066235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43","termid":"PBO:0066235"}


id: PBO:0063342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 2","termid":"PBO:0063342"}


id: PBO:0058784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: FYPO:0003896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial morphology","synonyms":[{"name":"normal mitochondrial morphology during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial morphology during vegetative growth","type":"exact"},{"name":"normal mitochondrial tubular network morphology","type":"exact"}],"termid":"FYPO:0003896"}


id: PBO:0060793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S4","termid":"PBO:0060793"}


id: GO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + (15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate = NAD(P)H + H+ + 15-oxo-5,8,11-cis-13-trans-icosatetraenoate.","definition_xrefs":["EC:1.1.1.232","MetaCyc:1.1.1.232-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"15-hydroxyicosatetraenoate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161789"],"synonyms":[{"name":"(15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD(P)+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxyeicosatetraenoate dehydrogenase activity","type":"related"}],"termid":"GO:0047034"}


id: PBO:0032725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_with_abnormal_spindle","termid":"PBO:0032725"}


id: PBO:0064891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta pseudogene 1","termid":"PBO:0064891"}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["GOC:BHF","PMID:16931858","PMID:21196346","GOC:mah","PMID:10206335","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: MONDO:0011422
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85455],"is_not":false,"summary":null,"term":"MONDO:0011422"}]},"cv_name":"mondo","definition":"Autosomal recessive proximal renal tubular acidosis (AR pRTA) is a rare form of proximal renal tubular acidosis (pRTA) characterized by an isolated defect in the proximal tubule leading to the decreased reabsorption of bicarbonate and consequentially to urinary bicarbonate wastage along with additional characteristic clinical features.","definition_xrefs":["Orphanet:93607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"proximal renal tubular acidosis","termid":"MONDO:0008369"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive proximal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:370883","MESH:C567038","OMIM:604278","GARD:16826","UMLS:C1970309"],"synonyms":[{"name":"AR pRTA","type":"exact"},{"name":"RTA, proximal, autosomal recessive","type":"related"},{"name":"proximal renal tubular acidosis with ocular abnormalities and intellectual disability","type":"exact"},{"name":"proximal renal tubular acidosis, autosomal recessive","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and intellectual disability","type":"related"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and mental retardation","type":"related"}],"termid":"MONDO:0011422","terms_by_termid":{"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0011422"}}}


id: PBO:0004629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2,N2-dimethylguanosine tRNA methyltransferase","termid":"PBO:0004629"}


id: MONDO:1011212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in Mexican tetra.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, Mexican tetra","secondary_identifiers":["OMIA:000219-7994"],"termid":"MONDO:1011212","xrefs":{"Monarch":{"xref_id":"1011212"}}}


id: MONDO:0008298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial tetramelic oligodactyly is a rare, genetic, congenital limb malformation disorder characterized by isolated, postaxial oligodactyly in all four extremities. Patients present a consistent pattern of malformation ranging from complete absence of the 5th metacarpals, metatarsals and phalanges to complete absence of the 5th metacarpals and metatarsals, with some residual distal 5th phalanges. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:2730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"postaxial tetramelic oligodactyly","secondary_identifiers":["OMIM:176240","UMLS:C1867924","MESH:C566767","MEDGEN:357380","GARD:4065"],"synonyms":[{"name":"oligodactyly tetramelic postaxial","type":"related"},{"name":"postaxial oligodactyly, tetramelic","type":"related"}],"termid":"MONDO:0008298","xrefs":{"Monarch":{"xref_id":"0008298"}}}


id: PATO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000168 relative time (obsolete PATO:0000168)","termid":"PATO:0000168"}


id: PBO:0068522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 117, pseudogene","termid":"PBO:0068522"}


id: MONDO:0021454
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of eye","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4780","ICD9:224.8","ICD9:224.0","ICD9:224.9","MEDGEN:401267","SCTID:92097004","UMLS:C1867616"],"synonyms":[{"name":"benign eye neoplasm","type":"exact"},{"name":"benign eye tumor","type":"exact"},{"name":"benign eye tumour","type":"exact"},{"name":"benign neoplasm of the eye","type":"exact"},{"name":"benign ocular neoplasm","type":"exact"},{"name":"benign ocular tumor","type":"exact"},{"name":"benign ocular tumour","type":"exact"},{"name":"benign tumor of eye","type":"exact"},{"name":"benign tumor of the eye","type":"exact"},{"name":"benign tumour of eye","type":"exact"},{"name":"benign tumour of the eye","type":"exact"},{"name":"eye benign neoplasm","type":"exact"}],"termid":"MONDO:0021454","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0021454"}}}


id: GO:0035870
data:
  {"annotated_genes":["SJAG_04487","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98990,118632],"is_not":false,"summary":null,"term":"GO:0035870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dITP + H2O = dIMP + H+ + diphosphate.","definition_xrefs":["PMID:21548881","GOC:dgf","RHEA:28342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0016787","GO:0047429","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2509838","KEGG_REACTION:R03531","MetaCyc:RXN0-1602"],"synonyms":[{"name":"2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"dITP pyrophosphatase activity","type":"exact"},{"name":"deoxyinosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0035870","terms_by_termid":{"GO:0035870":null}}


id: GO:0016987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003700","GO:0003674"],"is_obsolete":false,"name":"sigma factor activity","secondary_identifiers":["GO:0001053","GO:0000996"],"synonyms":[{"name":"DNA-dependent RNA polymerase promoter selection factor","type":"exact"},{"name":"bacterial sigma factor activity","type":"narrow"},{"name":"core DNA-dependent RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"plastid sigma factor activity","type":"narrow"},{"name":"promoter selection factor activity","type":"narrow"},{"name":"sigma transcription factor","type":"exact"}],"termid":"GO:0016987"}


id: FYPO:0003735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product that normally binds to a specific DNA sequence instead binds to a different sequence when a gene is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:7651412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"altered DNA binding specificity","synonyms":[{"name":"abnormal DNA binding specificity","type":"exact"}],"termid":"FYPO:0003735"}


id: FYPO:0006942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal lipid binding","termid":"FYPO:0006942"}


id: GO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a motile cilium.","definition_xrefs":["GOC:cilia","GOC:krc","PMID:19776033","ZFIN:dsf","GOC:TermGenie","PMID:21129373","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"motile cilium assembly","secondary_identifiers":["GO:1903887"],"synonyms":[{"name":"motile primary cilia assembly","type":"related"},{"name":"motile primary cilia formation","type":"related"},{"name":"motile primary cilium assembly","type":"related"},{"name":"motile primary cilium formation","type":"related"},{"name":"nodal cilium assembly","type":"related"},{"name":"nodal cilium formation","type":"related"}],"termid":"GO:0044458"}


id: MONDO:0011795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anonychia-microcephaly syndrome is a multiple congenital anomaly disorder characterized by anonychia congenita totalis and microcephaly, and normal intelligence along with some minor anomalies including single transverse palmar creases, fifth-finger clinodactyly and widely-spaced teeth.","definition_xrefs":["Orphanet:1094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-microcephaly syndrome","secondary_identifiers":["UMLS:C1846617","MEDGEN:339565","GARD:5123","OMIM:607214","SCTID:720494009"],"synonyms":[{"name":"Teebi-Kaurah syndrome","type":"exact"},{"name":"anonychia total with microcephaly","type":"related"},{"name":"anonychia, total, with microcephaly","type":"related"},{"name":"total anonychia congenita and microcephaly","type":"related"},{"name":"total anonychia with microcephaly","type":"related"}],"termid":"MONDO:0011795","xrefs":{"Monarch":{"xref_id":"0011795"}}}


id: GO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 8 isopentenyl diphosphate = di-trans,octa-cis-undecaprenyl diphosphate + 8 diphosphate.","definition_xrefs":["RHEA:27551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity","termid":"GO:0045547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity","secondary_identifiers":["MetaCyc:RXN-8999","EC:2.5.1.31"],"synonyms":[{"name":"UPP synthetase activity","type":"related"},{"name":"bactoprenyl-diphosphate synthase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenyl-diphosphate:isopentenyl-diphosphate undecaprenylcistransferase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenylcistransferase activity","type":"exact"},{"name":"di-trans,poly-cis-undecaprenyl-diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthetase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"undecaprenyl-diphosphate synthase activity","type":"related"}],"termid":"GO:0008834"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: GO:0033568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lactoferrin and delivering lactoferrin into the cell via endocytosis. Lactoferrin is an iron-binding glycoprotein which binds ferric iron most efficiently at low pH.","definition_xrefs":["PMID:16261254","GOC:mlg","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"lactoferrin receptor activity","termid":"GO:0033568"}


id: PBO:0076897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 51","termid":"PBO:0076897"}


id: MOD:01927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glycosyltyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-tyrosine","synonyms":[{"name":"OGlycoTyr","type":"exact"}],"termid":"MOD:01927"}


id: MONDO:0035685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolysis bullosa simplex with extracutaneous involvement (obsolete MONDO:0035685)","secondary_identifiers":["Orphanet:595351"],"synonyms":[{"name":"EBS with extracutaneous involvement","type":"exact"}],"termid":"MONDO:0035685","xrefs":{"Monarch":{"xref_id":"0035685"}}}


id: GO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K5 acetylation (obsolete GO:0043977)","synonyms":[{"name":"histone H2A acetylation at K5","type":"exact"}],"termid":"GO:0043977"}


id: GO:0035169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized larval lymph gland-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["GOC:bf","PMID:8174791","PMID:11921077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph gland plasmatocyte differentiation","synonyms":[{"name":"lymph gland plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035169"}


id: MONDO:0009720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multiple congenital anomalies syndrome characterized by facial dysmorphism (hypertelorism, broad and high nasal bridge, depressed nasal ridge, short columella, underdeveloped maxilla, and prominent cupid-bow upper lip vermillion), mild to severe congenital sensorineural hearing loss, and skeletal abnormalities consisting of brachytelephalangy and broad thumbs and halluces with large, rounded epiphyses. Additional manifestations that have been reported include pulmonary valve stenosis, voice hoarseness and renal agenesis.","definition_xrefs":["Orphanet:2662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Keipert syndrome","secondary_identifiers":["OMIM:255980","DOID:0111842","MESH:C538337","OMIM:301026","UMLS:C1850627","NCIT:C186306","GARD:267","SCTID:763774001","MEDGEN:338088"],"synonyms":[{"name":"KPTS","type":"exact"},{"name":"Keipert syndrome","type":"exact"},{"name":"Keipert syndrome, X-linked recessive","type":"exact"},{"name":"nasodigitoacoustic syndrome","type":"exact"},{"name":"nasodigitoacoustic syndrome, formerly","type":"exact"}],"termid":"MONDO:0009720","xrefs":{"Monarch":{"xref_id":"0009720"}}}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_02605","SJAG_05346","SJAG_03591","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110554,98876,91709,93301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93302,91710,98877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:1012218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarthritis, non-human animal","termid":"MONDO:1011952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, domestic cat","secondary_identifiers":["OMIA:000805-9685"],"termid":"MONDO:1012218","xrefs":{"Monarch":{"xref_id":"1012218"}}}


id: GO:0032943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell proliferation","synonyms":[{"name":"PBMC proliferation","type":"narrow"},{"name":"peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032943"}


id: MONDO:0025136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of cattle caused by mycobacterium bovis. It is transmissible to man and other animals.","definition_xrefs":["MESH:D014380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"tuberculosis, non-human animal","termid":"MONDO:0700212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis, bovine","synonyms":[{"name":"Tuberculoses, bovine","type":"related"},{"name":"bovine Tuberculoses","type":"related"},{"name":"bovine tuberculosis","type":"related"}],"termid":"MONDO:0025136","xrefs":{"Monarch":{"xref_id":"0025136"}}}


id: PBO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit beta 1","termid":"PBO:0039670"}


id: PBO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2A","termid":"PBO:0061771"}


id: PBO:0041073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP/retinoic acid inducible neural specific 2","termid":"PBO:0041073"}


id: MONDO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive or inappropriate lactation in females or males, and not necessarily related to pregnancy. Galactorrhea can occur either unilaterally or bilaterally, and be profuse or sparse. Its most common cause is hyperprolactinemia.","definition_xrefs":["MESH:D005687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactation disease","termid":"MONDO:0045019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactorrhea","secondary_identifiers":["SCTID:78622004","UMLS:C3665358","MEDGEN:777088","ICD9:611.6","HP:0100829","NCIT:C113343"],"synonyms":[{"name":"galactorrhea","type":"exact"},{"name":"galactorrhea (disease)","type":"exact"}],"termid":"MONDO:0009256","xrefs":{"Monarch":{"xref_id":"0009256"}}}


id: MONDO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma that arises from the epididymis. It usually presents as a scrotal mass and may be associated with testicular pain.","definition_xrefs":["NCIT:C39957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymis cancer","termid":"MONDO:0001016"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epididymal adenocarcinoma","secondary_identifiers":["DOID:10368","MEDGEN:307180","UMLS:C1510784"],"synonyms":[{"name":"adenocarcinoma of the epididymis","type":"exact"},{"name":"epididymal adenocarcinoma","type":"exact"},{"name":"epididymis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001017","xrefs":{"Monarch":{"xref_id":"0001017"}}}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: PBO:0059175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRAP antisense RNA 1","termid":"PBO:0059175"}


id: PBO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase alpha","termid":"PBO:0043011"}


id: FYPO:0003039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to ultraviolet light. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:10954610","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to UV","synonyms":[{"name":"decreased RNA stability during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased RNA stability during cellular response to ultraviolet light","type":"exact"},{"name":"reduced RNA stability during cellular response to UV","type":"exact"}],"termid":"FYPO:0003039"}


id: PBO:0111812
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2HC5 type","termid":"PBO:0111812"}


id: GO:0045696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of embryo sac egg cell differentiation","termid":"GO:0045694"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryo sac egg cell differentiation","synonyms":[{"name":"activation of female gametophyte egg cell differentiation","type":"narrow"},{"name":"positive regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"stimulation of female gametophyte egg cell differentiation","type":"narrow"},{"name":"up regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"up-regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"upregulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045696"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: MONDO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of an organized, regular atrial rhythm with atrial rate between 101 and 240 beats per minute. The P wave morphology must be distinct from the sinus P wave morphology. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial tachycardia","secondary_identifiers":["UMLS:C0546959","MEDGEN:107485","NCIT:C35481","NANDO:2200218","SCTID:276796006","ICD9:427.89","EFO:0005308"],"termid":"MONDO:0005479","xrefs":{"Monarch":{"xref_id":"0005479"}}}


id: PBO:0002825
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ntp1","termid":"PBO:0002825"}


id: PR:O60056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC56F2.05c gene.","definition_xrefs":["UniProtKB:O60056","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C56F2.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.05c","synonyms":[{"name":"Spom972h-SPBC56F2.05c","type":"exact"}],"termid":"PR:O60056"}


id: PBO:0087041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087041"}


id: MONDO:0009365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hydrolethalus syndrome in which the cause of the disease is a mutation in the HYLS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolethalus syndrome","termid":"MONDO:0006037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome 1","secondary_identifiers":["DOID:0111355","MESH:C565504","MEDGEN:343455","UMLS:C1856016","OMIM:236680","GARD:15182"],"synonyms":[{"name":"HLS1","type":"related"},{"name":"HYLS1 hydrolethalus syndrome","type":"exact"},{"name":"hydrolethalus syndrome","type":"broad"},{"name":"hydrolethalus syndrome 1","type":"exact"},{"name":"hydrolethalus syndrome caused by mutation in HYLS1","type":"exact"},{"name":"hydrolethalus syndrome type 1","type":"exact"}],"termid":"MONDO:0009365","xrefs":{"Monarch":{"xref_id":"0009365"}}}


id: MONDO:0006146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma that is characterized by the presence of chondroid elements.","definition_xrefs":["NCIT:C42589"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroid hamartoma","secondary_identifiers":["UMLS:C1707390","EFO:1000175","MEDGEN:313028"],"termid":"MONDO:0006146","xrefs":{"Monarch":{"xref_id":"0006146"}}}


id: PBO:0074746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105B","termid":"PBO:0074746"}


id: FYPO:0008065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased after phosphate removal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased sporulation frequency","termid":"FYPO:0000584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased sporulation frequency during phosphate starvation","termid":"FYPO:0008065"}


id: PATO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripartite","termid":"PATO:0001890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-shaped","termid":"PATO:0001201"}


id: PBO:0042244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 6","termid":"PBO:0042244"}


id: GO:0018034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-alanine amide by hydrolysis and oxidation of an interior Ala-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0081"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-alanine amidation (obsolete GO:0018034)","termid":"GO:0018034"}


id: MONDO:0008555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant disorder caused by mutation(s) in the ANKRD26 gene, encoding ANKRD26 protein. Additionally, in one family, a mutation(s) has been identified in the MASTL gene, encoding serine/threonine-protein kinase greatwall. The condition is characterized by mild to moderate bruisability.","definition_xrefs":["NCIT:C129035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 2","secondary_identifiers":["MEDGEN:349976","NANDO:2200663","OMIM:188000","GARD:5191","MESH:C536519","UMLS:C1861185"],"synonyms":[{"name":"THC2","type":"related"},{"name":"thrombocytopenia 2","type":"exact"},{"name":"thrombocytopenia autosomal dominant 2","type":"related"},{"name":"thrombocytopenia type 2","type":"exact"},{"name":"thrombocytopenia, autosomal dominant, 2","type":"related"}],"termid":"MONDO:0008555","xrefs":{"Monarch":{"xref_id":"0008555"}}}


id: PBO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_level","termid":"PBO:0028868"}


id: PBO:0038741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 1","termid":"PBO:0038741"}


id: FYPO:0007030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the levels and proportions of monosaccharides in the cell wall are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30389790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall monosaccharide composition during vegetative growth","synonyms":[{"name":"normal cell wall monosaccharide composition during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007030"}


id: PATO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having root like extensions radiating from its center.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizoidal","termid":"PATO:0001364"}


id: MONDO:0010000
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85171],"is_not":false,"summary":null,"term":"MONDO:0010000"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"is_obsolete":false,"name":"rod-cone dystrophy, sensorineural deafness, and Fanconi-type renal dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:376565","MESH:C564829","OMIM:268315","UMLS:C1849333"],"synonyms":[{"name":"rod-cone dystrophy, sensorineural deafness, and Fanconi-type renal dysfunction","type":"exact"}],"termid":"MONDO:0010000","terms_by_termid":{"MONDO:0010000":null},"xrefs":{"Monarch":{"xref_id":"0010000"}}}


id: GO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a hydroxyl group to one or more fatty acids in a lipid.","definition_xrefs":["GOC:hjd","PMID:15658937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid hydroxylation","synonyms":[{"name":"fatty acid hydroxylation","type":"related"}],"termid":"GO:0002933"}


id: MONDO:1010147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stiff skin syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stiff skin syndrome, non-human animal","secondary_identifiers":["OMIA:002018"],"termid":"MONDO:1010147","xrefs":{"Monarch":{"xref_id":"1010147"}}}


id: PBO:0053584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 607","termid":"PBO:0053584"}


id: PBO:0028334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_5-fluorouracil","termid":"PBO:0028334"}


id: PBO:0082749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance","termid":"PBO:0082749"}


id: GO:0032174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tubular structure with flared ends, shaped like an hourglass and composed of highly ordered arrays of septin filaments, that forms at the bud neck of a dividing cell. In S. cerevisiae, this structure is located at the bud neck throughout most of the cell cycle and the septins are fixed within the structure, not exchanging with soluble septins. This septin structure acts as a scaffold for other proteins that function at the bud neck.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"is_a","term_name":"septin collar","termid":"GO:0032173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"cellular bud neck septin collar","termid":"GO:0032174"}


id: PATO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point.","direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acuminate","termid":"PATO:0002228"}


id: PBO:0044962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7B","termid":"PBO:0044962"}


id: FYPO:0005414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiosis II","synonyms":[{"name":"increased protein accumulation during meiosis II","type":"related"},{"name":"increased protein level during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005414"}


id: PBO:0079867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk zinc finger","termid":"PBO:0079867"}


id: PBO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A X-linked","termid":"PBO:0045999"}


id: PBO:0080474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitronectin","termid":"PBO:0080474"}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: GO:0071634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001201"],"synonyms":[{"name":"regulation of TGF-B production","type":"exact"},{"name":"regulation of TGF-beta production","type":"exact"},{"name":"regulation of TGFB production","type":"exact"},{"name":"regulation of TGFbeta production","type":"exact"},{"name":"regulation of transforming growth factor-beta production","type":"exact"},{"name":"regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071634"}


id: PBO:0066970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 272","termid":"PBO:0066970"}


id: GO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycosinolate metabolic process (obsolete GO:0019757)","synonyms":[{"name":"glycosinolate metabolism","type":"exact"}],"termid":"GO:0019757"}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: MONDO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cranial nerve palsy that involves the trochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"paralytic strabismus","termid":"MONDO:0001143"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"},{"relation_name":"is_a","term_name":"trochlear nerve disorder","termid":"MONDO:0007002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fourth cranial nerve palsy","secondary_identifiers":["UMLS:C0271375","ICD9:378.53","SCTID:20610004","DOID:10869","MEDGEN:75746"],"synonyms":[{"name":"cranial nerve palsy of trochlear nerve","type":"exact"},{"name":"fourth nerve palsy","type":"exact"},{"name":"fourth or trochlear nerve palsy","type":"exact"},{"name":"trochlear nerve cranial nerve palsy","type":"exact"}],"termid":"MONDO:0001146","xrefs":{"Monarch":{"xref_id":"0001146"}}}


id: GO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol = ADP + undecaprenyl phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"undecaprenol kinase activity","synonyms":[{"name":"ATP:undecaprenol phosphotransferase activity","type":"related"},{"name":"C55-isoprenoid alcohol kinase activity","type":"related"},{"name":"C55-isoprenoid alcohol phosphokinase activity","type":"related"},{"name":"C55-isoprenyl alcohol phosphokinase activity","type":"related"},{"name":"isoprenoid alcohol kinase (phosphorylating)","type":"broad"},{"name":"isoprenoid alcohol kinase activity","type":"broad"},{"name":"isoprenoid alcohol phosphokinase activity","type":"broad"},{"name":"isoprenoid-alcohol kinase activity","type":"broad"},{"name":"polyisoprenol kinase activity","type":"broad"}],"termid":"GO:0009038"}


id: GO:0098751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone cell development","termid":"GO:0098751"}


id: PBO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 33","termid":"PBO:0070728"}


id: GO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of intraglomerular glomerular mesangium cells in the mesonephros by cell division, resulting in the expansion of their population. Intraglomerular mesangial cells are specialized pericytes located among the glomerular capillaries within a renal corpuscle of a kidney. They are required for filtration, structural support and phagocytosis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"},{"relation_name":"is_a","term_name":"intraglomerular mesangial cell proliferation","termid":"GO:0072123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric intraglomerular mesangial cell proliferation","termid":"GO:0061270"}


id: PBO:0075797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 subunit of BAF chromatin remodeling complex","termid":"PBO:0075797"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: MONDO:1010916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, chicken","secondary_identifiers":["OMIA:000693-9031"],"termid":"MONDO:1010916","xrefs":{"Monarch":{"xref_id":"1010916"}}}


id: PBO:0069138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 389, pseudogene","termid":"PBO:0069138"}


id: PBO:0003590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40 (predicted)","termid":"PBO:0003590"}


id: PBO:0110406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 9","termid":"PBO:0110406"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: PBO:0079524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase related protein 1","termid":"PBO:0079524"}


id: PBO:0073564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing transforming protein D","termid":"PBO:0073564"}


id: PBO:0041184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 8","termid":"PBO:0041184"}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: GO:0035281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transport of pre-microRNAs (pre-miRNAs) from the nucleus to the cytoplasm. Pre-miRNAs are a ~60-70 nucleotide stem loop intermediate in miRNA production, produced by the nuclear cleavage of a primary miRNA (pri-mRNA) transcript. Pre-miRNAs are transported from the nucleus to the cytoplasm where further cleavage occurs to produce a mature miRNA product.","definition_xrefs":["GOC:sl","PMID:14744438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"part_of","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"pre-miRNA export from nucleus","synonyms":[{"name":"pre-microRNA export from cell nucleus","type":"exact"},{"name":"pre-microRNA export from nucleus","type":"related"},{"name":"pre-microRNA export out of nucleus","type":"exact"},{"name":"pre-microRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"pre-microRNA-nucleus export","type":"exact"}],"termid":"GO:0035281"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0058995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein","termid":"PBO:0058995"}


id: SO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyladenosine","secondary_identifiers":["RNAMOD:001"],"synonyms":[{"name":"1-methyladenosine","type":"exact"},{"name":"m1A","type":"exact"},{"name":"one methyladenosine","type":"exact"}],"termid":"SO:0001295"}


id: PBO:0014235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1 (predicted)","termid":"PBO:0014235"}


id: MONDO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lesion caused by type 1 or type 2 herpes simplex virus, typically involving the oralfacial region.","definition_xrefs":["NCIT:C34695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"disease arising from reactivation of latent virus","termid":"MONDO:0100330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes labialis","secondary_identifiers":["MEDGEN:5533","MESH:D006560","SCTID:1475003","UMLS:C0019345"],"synonyms":[{"name":"Herpes simplex, labial","type":"related"},{"name":"Sore, cold","type":"related"},{"name":"Sores, cold","type":"related"},{"name":"blister, fever","type":"related"},{"name":"blisters, fever","type":"related"},{"name":"cold sore","type":"exact"},{"name":"cold sores","type":"exact"},{"name":"fever blister","type":"related"},{"name":"fever blisters","type":"related"},{"name":"herpes labialis","type":"exact"},{"name":"herpes simplex labialis","type":"related"},{"name":"labial Herpes simplex","type":"related"}],"termid":"MONDO:0043653","xrefs":{"Monarch":{"xref_id":"0043653"}}}


id: PBO:0029040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_non-ionic_osmotic_stress","termid":"PBO:0029040"}


id: GO:0010827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of D-glucose transmembrane transport","synonyms":[{"name":"regulation of glucose transmembrane transport","type":"exact"},{"name":"regulation of glucose transport","type":"related"}],"termid":"GO:0010827"}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: GO:0098727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the numbers of cells of a particular type or in a tissue are maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of cell number","termid":"GO:0098727"}


id: MOD:00900
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","termid":"MOD:00898"},{"relation_name":"is_a","term_name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"(R)-2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]thiopropanoic acid","type":"exact"}],"termid":"MOD:00900"}


id: FYPO:0001685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to purvalanol A","synonyms":[{"name":"increased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"increased transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001685"}


id: GO:0180000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a histone methyltransferase.","definition_xrefs":["PMID:30923826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"histone methyltransferase inhibitor activity","termid":"GO:0180000"}


id: PBO:0040223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATE1 opposite strand, pseudogene","termid":"PBO:0040223"}


id: PBO:0012598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alditol NADP+ 1-oxidoreductase activity (predicted)","termid":"PBO:0012598"}


id: GO:2000829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"negatively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of parathyroid hormone secretion","synonyms":[{"name":"negative regulation of PTH secretion","type":"exact"},{"name":"negative regulation of parathormone secretion","type":"exact"},{"name":"negative regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000829"}


id: MONDO:0975748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 26, autosomal dominant, susceptibility to","secondary_identifiers":["OMIM:620923"],"termid":"MONDO:0975748","xrefs":{"Monarch":{"xref_id":"0975748"}}}


id: PBO:0074349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 associated long non-coding RNA","termid":"PBO:0074349"}


id: PBO:0084358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; responsible for regulation of sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; can be ubiquitinated by ubiquitin ligase SCF-Met30p, is either degraded or maintained in an inactive state; regulates degradation of its own DNA-binding cofactors by targeting them to SCF-Met30p","termid":"PBO:0084358"}


id: GO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxusin + [reduced NADPH-hemoprotein reductase] + O2 = 7beta-hydroxytaxusin + [oxidized NADPH-hemoprotein reductase] + H2O. Also converts 2alpha-hydroxytaxusin to 2alpha,7beta-dihydroxytaxusin.","definition_xrefs":["EC:1.14.14.182","PMID:15157877","PMID:15178487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taxoid 7beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R09868"],"termid":"GO:0036239"}


id: PBO:0028679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin","termid":"PBO:0028679"}


id: MONDO:0020650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell tumor of the vulva","secondary_identifiers":["UMLS:C4288008","NCIT:C128294","MEDGEN:925540","ONCOTREE:VGCT"],"termid":"MONDO:0020650","xrefs":{"Monarch":{"xref_id":"0020650"}}}


id: SO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non coding RNA transcript, complementary to subtelomeric tract of TERRA transcript but devoid of the repeats.","definition_xrefs":["PMID:2139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRET","termid":"SO:0001924"}


id: PBO:0048307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 17","termid":"PBO:0048307"}


id: PBO:0080840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 4","termid":"PBO:0080840"}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: GO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the cyanelle, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The best characterized cyanelle ribonuclease P complex, from the alga Cyanophora paradoxa, contains a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyanelle ribonuclease P complex","synonyms":[{"name":"cyanelle RNase P complex","type":"exact"}],"termid":"GO:0030679"}


id: GO:0004341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucono-1,5-lactone + H2O = D-gluconate.","definition_xrefs":["EC:3.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"gluconolactonase activity","secondary_identifiers":["MetaCyc:GLUCONOLACT-RXN","RHEA:10440"],"synonyms":[{"name":"D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"aldonolactonase activity","type":"related"},{"name":"glucono-delta-lactonase activity","type":"related"},{"name":"gulonolactonase activity","type":"related"},{"name":"lactonase activity","type":"broad"}],"termid":"GO:0004341"}


id: MONDO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypohidrotic ectodermal dysplasia (obsolete MONDO:0002019)","termid":"MONDO:0002019","xrefs":{"Monarch":{"xref_id":"0002019"}}}


id: PBO:0064890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta","termid":"PBO:0064890"}


id: MONDO:0015205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated lissencephaly type 1 without known genetic defects belongs to the genetically heterogeneous group, classic lissencephaly. It is a diagnosis of exclusion, when neither associated malformations nor family history are present, and in the absence of mutations of genes known to be involved in classic lissencephaly. Clinically patients present with the common features of classic lissencephaly such as developmental delay, intellectual disability, and seizures.","definition_xrefs":["Orphanet:1084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic lissencephaly","termid":"MONDO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated lissencephaly type 1 without known genetic defects","secondary_identifiers":["MEDGEN:895946","SCTID:715406003","UMLS:C4275151","icd11.foundation:80358651","GARD:18715"],"termid":"MONDO:0015205","xrefs":{"Monarch":{"xref_id":"0015205"}}}


id: GO:0050590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: desacetoxyvindoline + 2-oxoglutarate + O2 = desacetylvindoline + succinate + CO2.","definition_xrefs":["EC:1.14.11.20","MetaCyc:1.14.11.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"desacetoxyvindoline 4-hydroxylase activity","secondary_identifiers":["RHEA:18973","KEGG_REACTION:R05857"],"synonyms":[{"name":"D17H activity","type":"related"},{"name":"deacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4-beta-hydroxylating) activity","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline-4-hydroxylase activity","type":"related"},{"name":"desacetyoxyvindoline-17-hydroxylase activity","type":"related"}],"termid":"GO:0050590"}


id: FYPO:0001612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular arginine level","termid":"FYPO:0001621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vacuolar arginine level","synonyms":[{"name":"decreased level of arginine in vacuole","type":"exact"},{"name":"decreased vacuolar L-arginine level","type":"exact"},{"name":"decreased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar arginine level during vegetative growth","type":"exact"},{"name":"reduced level of arginine in vacuole","type":"exact"},{"name":"reduced vacuolar arginine level","type":"exact"}],"termid":"FYPO:0001612"}


id: GO:0140383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxytryptamine + ATP = 4-hydoxytryptamine 4-phosphate + ADP + H+.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxytryptamine kinase activity","secondary_identifiers":["EC:2.7.1.222","RHEA:55564"],"termid":"GO:0140383"}


